Query         002331
Match_columns 935
No_of_seqs    391 out of 2287
Neff          5.4 
Searched_HMMs 29240
Date          Mon Mar 25 22:00:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002331hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b9d_A Serine/threonine-protei 100.0 7.8E-56 2.7E-60  493.3  23.0  255  674-934    22-279 (350)
  2 4fih_A Serine/threonine-protei 100.0 2.6E-54 8.8E-59  480.5  23.7  251  675-934    73-326 (346)
  3 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-54 4.9E-59  476.1  19.0  251  676-934    32-293 (311)
  4 3fpq_A Serine/threonine-protei 100.0 1.1E-53 3.9E-58  464.5  25.6  250  678-934    28-285 (290)
  5 3ubd_A Ribosomal protein S6 ki 100.0 8.9E-55   3E-59  476.3  14.8  254  673-934    21-284 (304)
  6 3hyh_A Carbon catabolite-derep 100.0   2E-53 6.7E-58  459.5  23.2  249  676-934    13-265 (275)
  7 4fie_A Serine/threonine-protei 100.0 3.2E-53 1.1E-57  482.9  25.5  252  674-934   149-403 (423)
  8 3omv_A RAF proto-oncogene seri 100.0 1.1E-52 3.7E-57  460.3  25.5  255  669-930    29-292 (307)
  9 4g3f_A NF-kappa-beta-inducing  100.0 1.4E-52 4.7E-57  464.9  21.1  244  674-930    56-308 (336)
 10 4aoj_A High affinity nerve gro 100.0 7.3E-52 2.5E-56  457.3  26.6  254  671-932    36-313 (329)
 11 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-52 7.7E-57  455.7  22.2  252  672-931     9-282 (299)
 12 4gt4_A Tyrosine-protein kinase 100.0 5.2E-52 1.8E-56  454.6  24.7  254  672-932    22-300 (308)
 13 4ase_A Vascular endothelial gr 100.0 4.6E-51 1.6E-55  455.1  20.5  260  667-932    55-341 (353)
 14 4b99_A Mitogen-activated prote 100.0 9.4E-50 3.2E-54  451.1  27.2  252  676-934    54-347 (398)
 15 4g31_A Eukaryotic translation  100.0 2.3E-50   8E-55  439.4  21.3  249  676-934     5-282 (299)
 16 3uto_A Twitchin; kinase, muscl 100.0 2.2E-48 7.4E-53  458.5  26.2  252  675-934   156-413 (573)
 17 4f9c_A Cell division cycle 7-r 100.0 7.1E-48 2.4E-52  430.1  25.0  246  676-934    21-355 (361)
 18 3hmm_A TGF-beta receptor type- 100.0 2.5E-48 8.4E-53  423.1  19.3  249  676-932     3-291 (303)
 19 3v5w_A G-protein coupled recep 100.0 1.6E-47 5.5E-52  456.2  25.3  254  671-934   184-452 (689)
 20 3p86_A Serine/threonine-protei 100.0 3.9E-46 1.3E-50  403.4  26.9  262  667-931    28-291 (309)
 21 3fe3_A MAP/microtubule affinit 100.0 3.9E-46 1.3E-50  408.4  26.1  252  674-934    13-267 (328)
 22 3fxz_A Serine/threonine-protei 100.0 1.8E-45   6E-50  395.1  24.7  252  674-934    18-272 (297)
 23 1o6l_A RAC-beta serine/threoni 100.0 9.4E-46 3.2E-50  407.5  23.0  254  673-934     2-263 (337)
 24 2zv2_A Calcium/calmodulin-depe 100.0 2.8E-45 9.7E-50  390.8  23.6  254  674-934    11-295 (298)
 25 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.7E-46 3.3E-50  409.9  20.4  255  672-934    19-283 (353)
 26 3niz_A Rhodanese family protei 100.0 7.9E-45 2.7E-49  392.5  26.1  257  672-934    17-303 (311)
 27 3o0g_A Cell division protein k 100.0 9.8E-45 3.4E-49  385.6  26.0  253  676-934     2-285 (292)
 28 3zgw_A Maternal embryonic leuc 100.0   4E-45 1.4E-49  404.7  23.3  254  672-934     6-263 (347)
 29 3a62_A Ribosomal protein S6 ki 100.0 7.7E-45 2.6E-49  395.8  24.7  255  672-934    13-279 (327)
 30 1ob3_A PFPK5, cell division co 100.0 4.8E-45 1.6E-49  387.9  22.5  253  676-934     2-283 (288)
 31 2bdw_A Hypothetical protein K1 100.0 1.9E-44 6.5E-49  399.7  26.9  252  676-934    29-287 (362)
 32 2yab_A Death-associated protei 100.0   2E-44 6.8E-49  400.8  26.6  252  676-934    12-275 (361)
 33 3a8x_A Protein kinase C IOTA t 100.0 1.9E-44 6.5E-49  397.6  25.9  254  673-934     6-278 (345)
 34 1xjd_A Protein kinase C, theta 100.0 4.1E-45 1.4E-49  404.0  20.3  255  672-934    13-272 (345)
 35 3soa_A Calcium/calmodulin-depe 100.0 2.3E-44 7.9E-49  411.4  26.8  253  676-934    11-270 (444)
 36 1fot_A TPK1 delta, CAMP-depend 100.0 1.3E-44 4.4E-49  394.7  23.3  251  673-934     3-261 (318)
 37 2i0e_A Protein kinase C-beta I 100.0 7.2E-45 2.5E-49  403.2  21.6  256  671-934    15-279 (353)
 38 1tki_A Titin; serine kinase, m 100.0 1.4E-44 4.7E-49  393.7  23.1  251  675-934     4-260 (321)
 39 3kk8_A Calcium/calmodulin depe 100.0 9.7E-44 3.3E-48  374.6  27.1  253  675-934     5-264 (284)
 40 4dc2_A Protein kinase C IOTA t 100.0 2.9E-44 9.9E-49  405.4  24.4  255  672-934    48-321 (396)
 41 3kmu_A ILK, integrin-linked ki 100.0 5.3E-44 1.8E-48  372.1  24.3  254  671-932     5-264 (271)
 42 2y0a_A Death-associated protei 100.0   7E-44 2.4E-48  388.0  26.0  252  676-934    11-274 (326)
 43 3gni_B Strad alpha; kinase fol 100.0 8.9E-44 3.1E-48  394.8  26.1  259  671-934    20-336 (389)
 44 4aw2_A Serine/threonine-protei 100.0 1.4E-44 4.7E-49  413.0  19.7  260  670-934    68-341 (437)
 45 3cok_A Serine/threonine-protei 100.0 2.4E-44 8.1E-49  378.8  19.8  253  675-934    10-265 (278)
 46 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.9E-44 9.9E-49  397.3  21.4  251  673-934    38-296 (350)
 47 4hcu_A Tyrosine-protein kinase 100.0 1.3E-43 4.4E-48  372.1  25.2  254  670-932     4-260 (269)
 48 4ejn_A RAC-alpha serine/threon 100.0 1.5E-44 5.1E-49  409.9  19.3  254  673-934   145-407 (446)
 49 4agu_A Cyclin-dependent kinase 100.0   1E-43 3.6E-48  379.8  24.6  254  675-934     2-287 (311)
 50 3c0i_A Peripheral plasma membr 100.0 4.2E-44 1.4E-48  394.1  21.7  253  676-934    24-289 (351)
 51 3v8s_A RHO-associated protein  100.0 1.4E-44 4.7E-49  409.6  18.2  258  670-934    63-332 (410)
 52 2pmi_A Negative RE, cyclin-dep 100.0 4.1E-44 1.4E-48  387.4  20.7  253  675-934     4-296 (317)
 53 2r5t_A Serine/threonine-protei 100.0 4.4E-44 1.5E-48  400.0  21.4  254  673-934    35-296 (373)
 54 2psq_A Fibroblast growth facto 100.0 2.2E-43 7.4E-48  392.0  26.6  255  671-932    76-358 (370)
 55 3dtc_A Mitogen-activated prote 100.0 1.9E-43 6.5E-48  369.9  24.5  254  672-932     3-267 (271)
 56 3tki_A Serine/threonine-protei 100.0 1.1E-43 3.6E-48  386.6  23.4  253  675-934     6-264 (323)
 57 2eue_A Carbon catabolite derep 100.0 8.3E-44 2.8E-48  374.7  21.5  251  674-934    11-265 (275)
 58 2vd5_A DMPK protein; serine/th 100.0 2.4E-44 8.2E-49  407.8  18.6  259  670-934    55-330 (412)
 59 3fdn_A Serine/threonine-protei 100.0 7.9E-44 2.7E-48  375.6  21.2  253  672-934     5-260 (279)
 60 2c30_A Serine/threonine-protei 100.0   4E-43 1.4E-47  381.3  27.3  249  677-934    46-297 (321)
 61 3fme_A Dual specificity mitoge 100.0 1.5E-43 5.1E-48  373.6  22.9  257  671-934     2-269 (290)
 62 2rku_A Serine/threonine-protei 100.0 4.2E-43 1.5E-47  372.8  25.8  253  674-934    13-268 (294)
 63 3oz6_A Mitogen-activated prote 100.0 2.1E-43   7E-48  392.3  24.4  252  675-934     8-331 (388)
 64 1t4h_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47  371.7  25.7  256  672-934    22-285 (290)
 65 3vhe_A Vascular endothelial gr 100.0 1.3E-43 4.3E-48  386.6  21.6  260  667-932    13-349 (359)
 66 3dbq_A Dual specificity protei 100.0 2.6E-43 8.9E-48  385.2  24.1  255  672-934     5-276 (343)
 67 4fr4_A YANK1, serine/threonine 100.0 1.8E-43 6.1E-48  397.3  23.3  255  671-934    10-274 (384)
 68 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.5E-43 1.2E-47  367.9  24.0  253  671-932     3-258 (268)
 69 2w5a_A Serine/threonine-protei 100.0 1.8E-43 6.2E-48  371.6  21.9  257  675-935     5-271 (279)
 70 3kul_A Ephrin type-A receptor  100.0 4.5E-43 1.5E-47  381.5  25.6  254  671-931    44-306 (325)
 71 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.8E-44 9.5E-49  396.0  16.3  250  675-934     8-261 (336)
 72 3gen_A Tyrosine-protein kinase 100.0 3.7E-43 1.3E-47  370.6  24.1  255  669-932    17-274 (283)
 73 3lb7_A RAF proto-oncogene seri 100.0 5.3E-43 1.8E-47  378.1  25.5  259  669-934    29-296 (307)
 74 1kob_A Twitchin; kinase, intra 100.0 5.2E-43 1.8E-47  393.2  26.3  252  675-934    50-307 (387)
 75 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-43 3.8E-48  386.0  20.1  253  675-934    33-321 (329)
 76 2owb_A Serine/threonine-protei 100.0 4.4E-43 1.5E-47  382.2  24.9  253  674-934    39-294 (335)
 77 1x8b_A WEE1HU, WEE1-like prote 100.0 5.1E-43 1.7E-47  366.6  24.3  246  676-934    11-282 (289)
 78 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-43 1.4E-47  378.6  24.0  248  676-934    57-307 (311)
 79 3mtl_A Cell division protein k 100.0   1E-43 3.5E-48  385.5  19.1  252  676-934     2-284 (324)
 80 1luf_A Muscle-specific tyrosin 100.0 3.5E-43 1.2E-47  380.1  23.1  256  670-932    41-329 (343)
 81 3g33_A Cell division protein k 100.0 3.3E-43 1.1E-47  376.7  22.6  255  673-934     6-299 (308)
 82 2a2a_A Death-associated protei 100.0 5.8E-43   2E-47  378.0  24.4  252  676-934    12-275 (321)
 83 2vgo_A Serine/threonine-protei 100.0 3.2E-43 1.1E-47  371.9  21.8  254  671-934     9-265 (284)
 84 3uc3_A Serine/threonine-protei 100.0 4.6E-43 1.6E-47  388.0  24.1  252  673-934    17-277 (361)
 85 3qd2_B Eukaryotic translation  100.0 3.4E-43 1.2E-47  376.6  22.1  250  676-934     6-328 (332)
 86 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-42 3.8E-47  371.1  25.8  250  676-934    22-273 (303)
 87 3hko_A Calcium/calmodulin-depe 100.0 2.7E-43 9.3E-48  381.9  21.3  254  676-934    26-333 (345)
 88 1u5q_A Serine/threonine protei 100.0 6.1E-43 2.1E-47  385.6  24.4  249  676-934    54-308 (348)
 89 3f3z_A Calcium/calmodulin-depe 100.0 9.3E-43 3.2E-47  366.5  24.4  247  676-934     9-264 (277)
 90 3llt_A Serine/threonine kinase 100.0   1E-42 3.5E-47  380.7  25.6  254  669-934    28-358 (360)
 91 1rjb_A FL cytokine receptor; k 100.0 7.2E-43 2.5E-47  379.1  24.0  259  669-933    38-329 (344)
 92 2w4o_A Calcium/calmodulin-depe 100.0 7.5E-43 2.6E-47  384.3  24.4  251  673-934    50-308 (349)
 93 3an0_A Dual specificity mitoge 100.0 5.2E-43 1.8E-47  380.1  22.6  257  670-934    45-313 (340)
 94 1ua2_A CAK, cell division prot 100.0 8.1E-43 2.8E-47  381.7  24.3  255  674-934     8-294 (346)
 95 3t9t_A Tyrosine-protein kinase 100.0 1.2E-42 4.1E-47  362.4  24.4  253  671-932     3-258 (267)
 96 3tt0_A Basic fibroblast growth 100.0 1.9E-42 6.4E-47  384.7  27.1  257  669-932    62-346 (382)
 97 3cbl_A C-FES, proto-oncogene t 100.0 3.4E-43 1.2E-47  390.4  21.1  255  670-931   108-367 (377)
 98 3qup_A Tyrosine-protein kinase 100.0 4.5E-43 1.5E-47  377.4  21.4  260  669-934    16-301 (323)
 99 2x4f_A Myosin light chain kina 100.0 5.5E-43 1.9E-47  389.8  22.7  249  678-934    91-345 (373)
100 2ivs_A Proto-oncogene tyrosine 100.0   1E-42 3.4E-47  371.4  23.6  257  669-932    16-305 (314)
101 2qr7_A Ribosomal protein S6 ki 100.0 4.9E-43 1.7E-47  385.9  21.8  247  676-934    22-280 (342)
102 3ttj_A Mitogen-activated prote 100.0 7.1E-43 2.4E-47  400.5  24.0  250  675-934    61-358 (464)
103 4aaa_A Cyclin-dependent kinase 100.0   4E-43 1.4E-47  380.8  20.7  255  674-934    23-309 (331)
104 3mi9_A Cell division protein k 100.0 6.7E-43 2.3E-47  381.5  22.6  255  674-934    15-314 (351)
105 3s95_A LIMK-1, LIM domain kina 100.0 4.5E-43 1.6E-47  375.9  20.7  252  673-931     7-275 (310)
106 2zmd_A Dual specificity protei 100.0   1E-42 3.6E-47  389.4  24.4  254  673-934    53-323 (390)
107 2y94_A 5'-AMP-activated protei 100.0 4.9E-43 1.7E-47  404.3  22.2  254  672-934    12-269 (476)
108 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-42 4.8E-47  373.4  24.3  257  670-934    18-289 (326)
109 1mp8_A Focal adhesion kinase 1 100.0 9.1E-43 3.1E-47  368.5  22.4  255  670-932     9-270 (281)
110 2r3i_A Cell division protein k 100.0 9.6E-43 3.3E-47  369.7  22.4  254  675-934     2-286 (299)
111 2h6d_A 5'-AMP-activated protei 100.0   6E-43 2.1E-47  367.1  20.6  254  672-934     7-264 (276)
112 3is5_A Calcium-dependent prote 100.0 8.1E-43 2.8E-47  370.7  21.8  251  676-934    22-281 (285)
113 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-42   4E-47  370.7  23.0  258  669-932    16-301 (313)
114 3com_A Serine/threonine-protei 100.0 1.9E-42 6.5E-47  370.5  24.3  253  673-934    26-281 (314)
115 3lij_A Calcium/calmodulin depe 100.0 8.1E-43 2.8E-47  401.0  22.9  251  676-934    37-294 (494)
116 3rp9_A Mitogen-activated prote 100.0 1.4E-42 4.7E-47  394.3  24.4  252  676-934    53-399 (458)
117 3mwu_A Calmodulin-domain prote 100.0 4.7E-43 1.6E-47  401.8  20.7  251  676-934    22-279 (486)
118 1cm8_A Phosphorylated MAP kina 100.0 1.8E-42 6.1E-47  384.2  24.7  249  675-934    24-310 (367)
119 3pfq_A PKC-B, PKC-beta, protei 100.0 6.4E-43 2.2E-47  418.8  22.6  257  670-934   335-600 (674)
120 3lm5_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47  376.6  23.2  253  676-934    28-290 (327)
121 2j7t_A Serine/threonine-protei 100.0 5.7E-43   2E-47  371.9  19.3  254  674-934    17-278 (302)
122 4f0f_A Serine/threonine-protei 100.0 3.1E-42   1E-46  364.3  24.8  252  673-932    16-283 (287)
123 3bhy_A Death-associated protei 100.0 1.3E-42 4.4E-47  365.9  21.8  252  676-934     5-268 (283)
124 3kn6_A Ribosomal protein S6 ki 100.0 6.5E-43 2.2E-47  380.7  20.2  240  682-934    17-273 (325)
125 3l9p_A Anaplastic lymphoma kin 100.0 6.3E-43 2.1E-47  387.4  20.2  256  672-934    67-341 (367)
126 3nyv_A Calmodulin-domain prote 100.0 4.9E-43 1.7E-47  400.6  19.9  252  675-934    25-284 (484)
127 1u59_A Tyrosine-protein kinase 100.0 3.3E-42 1.1E-46  365.3  24.7  256  671-934     4-268 (287)
128 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-42 1.2E-46  366.0  24.5  257  669-932    17-282 (289)
129 2yex_A Serine/threonine-protei 100.0 2.7E-42 9.2E-47  361.5  23.2  252  676-934     7-264 (276)
130 1phk_A Phosphorylase kinase; g 100.0 5.6E-42 1.9E-46  363.6  25.9  253  675-934    16-286 (298)
131 3eqc_A Dual specificity mitoge 100.0 1.6E-42 5.6E-47  379.7  22.5  256  670-934    27-327 (360)
132 1nxk_A MAP kinase-activated pr 100.0 1.7E-42 5.9E-47  389.3  22.6  246  676-934    61-324 (400)
133 3n9x_A Phosphotransferase; mal 100.0   1E-41 3.5E-46  385.9  29.1  253  675-934    25-364 (432)
134 4eqm_A Protein kinase; transfe 100.0 2.3E-42 7.8E-47  369.9  22.4  251  674-930     9-267 (294)
135 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-42 7.3E-47  405.3  24.2  256  672-934   181-451 (543)
136 1k9a_A Carboxyl-terminal SRC k 100.0 3.4E-42 1.2E-46  392.2  24.9  250  669-931   186-438 (450)
137 3q5i_A Protein kinase; CDPK, m 100.0 2.6E-42 8.8E-47  397.8  24.2  252  675-934    35-304 (504)
138 2jam_A Calcium/calmodulin-depe 100.0 3.9E-42 1.3E-46  367.6  23.5  249  676-934     9-264 (304)
139 3ugc_A Tyrosine-protein kinase 100.0 2.6E-42 8.8E-47  366.9  21.9  253  672-932     6-285 (295)
140 4euu_A Serine/threonine-protei 100.0 2.1E-42 7.3E-47  372.7  21.5  252  675-933     8-304 (319)
141 3soc_A Activin receptor type-2 100.0 1.1E-42 3.7E-47  377.1  19.1  256  667-932    15-312 (322)
142 2pvf_A Fibroblast growth facto 100.0 8.7E-42   3E-46  370.8  26.3  258  668-932    27-312 (334)
143 2pml_X PFPK7, Ser/Thr protein  100.0   9E-43 3.1E-47  378.3  18.4  254  672-934    27-325 (348)
144 3dls_A PAS domain-containing s 100.0 8.6E-43 2.9E-47  381.7  18.4  244  676-934    24-277 (335)
145 3ork_A Serine/threonine protei 100.0 7.6E-43 2.6E-47  375.4  17.6  254  675-934    11-276 (311)
146 2clq_A Mitogen-activated prote 100.0 2.4E-42 8.2E-47  365.3  20.5  255  673-934    19-281 (295)
147 2qol_A Ephrin receptor; recept 100.0 2.8E-42 9.5E-47  383.8  21.6  253  672-931    41-302 (373)
148 2xir_A Vascular endothelial gr 100.0 2.9E-42   1E-46  368.1  20.9  260  667-932    18-304 (316)
149 2xrw_A Mitogen-activated prote 100.0 5.6E-42 1.9E-46  379.5  23.8  250  675-934    24-321 (371)
150 1p4o_A Insulin-like growth fac 100.0 3.8E-42 1.3E-46  369.4  21.7  257  669-932    18-293 (322)
151 2vwi_A Serine/threonine-protei 100.0   1E-42 3.6E-47  368.8  17.0  259  670-934     9-290 (303)
152 2acx_A G protein-coupled recep 100.0 3.5E-42 1.2E-46  405.9  23.0  255  672-934   180-447 (576)
153 3eb0_A Putative uncharacterize 100.0 7.8E-42 2.7E-46  379.4  24.4  250  672-934     3-324 (383)
154 2wtk_C Serine/threonine-protei 100.0 3.9E-42 1.3E-46  366.0  20.9  252  675-934     4-266 (305)
155 1qpc_A LCK kinase; alpha beta  100.0 2.1E-41 7.3E-46  356.4  26.1  253  669-931     6-262 (279)
156 3brb_A Proto-oncogene tyrosine 100.0 9.6E-42 3.3E-46  365.5  23.5  260  667-932    25-302 (313)
157 2ac3_A MAP kinase-interacting  100.0 2.3E-42   8E-47  370.1  18.4  249  676-934    12-298 (316)
158 1mqb_A Ephrin type-A receptor  100.0 1.6E-41 5.6E-46  370.0  25.4  255  671-932    39-303 (333)
159 3cc6_A Protein tyrosine kinase 100.0 8.2E-42 2.8E-46  360.6  22.2  255  670-932     6-267 (281)
160 2y7j_A Phosphorylase B kinase  100.0 1.6E-41 5.3E-46  376.0  25.4  252  676-934    94-362 (365)
161 2i1m_A Macrophage colony-stimu 100.0 6.9E-42 2.4E-46  369.7  22.1  257  670-932    40-320 (333)
162 1blx_A Cyclin-dependent kinase 100.0 7.7E-42 2.6E-46  367.1  22.2  252  676-934    11-299 (326)
163 1wak_A Serine/threonine-protei 100.0 5.7E-42 1.9E-46  376.7  21.6  248  675-934    36-394 (397)
164 3kfa_A Tyrosine-protein kinase 100.0   6E-42 2.1E-46  361.6  20.9  255  669-932     6-265 (288)
165 3nsz_A CK II alpha, casein kin 100.0 8.6E-42 2.9E-46  367.9  22.5  245  675-934    35-322 (330)
166 3q4u_A Activin receptor type-1 100.0 1.2E-41 3.9E-46  361.1  23.1  247  674-932     6-296 (301)
167 3pg1_A Mitogen-activated prote 100.0 1.1E-41 3.8E-46  372.9  23.4  257  671-934    17-319 (362)
168 4exu_A Mitogen-activated prote 100.0 1.8E-41 6.2E-46  375.4  25.4  247  676-934    42-326 (371)
169 1qcf_A Haematopoetic cell kina 100.0 8.3E-42 2.8E-46  389.1  23.2  253  669-931   181-437 (454)
170 1csn_A Casein kinase-1; phosph 100.0   2E-41 6.8E-46  358.8  24.3  250  673-932     7-277 (298)
171 2fst_X Mitogen-activated prote 100.0 5.8E-42   2E-46  380.8  21.0  248  676-934    29-314 (367)
172 4fvq_A Tyrosine-protein kinase 100.0 2.5E-42 8.5E-47  364.7  17.2  247  672-932     4-269 (289)
173 4e5w_A Tyrosine-protein kinase 100.0 1.3E-41 4.4E-46  361.5  22.6  254  672-931    17-295 (302)
174 3poz_A Epidermal growth factor 100.0 6.5E-42 2.2E-46  371.7  20.7  252  673-932    12-272 (327)
175 1xbb_A Tyrosine-protein kinase 100.0 1.7E-41 5.7E-46  360.6  23.3  254  670-931    10-272 (291)
176 3qyz_A Mitogen-activated prote 100.0 2.1E-41 7.2E-46  373.0  24.9  250  676-934    27-316 (364)
177 2wei_A Calmodulin-domain prote 100.0 5.8E-42   2E-46  363.4  19.7  251  676-934    22-279 (287)
178 2dyl_A Dual specificity mitoge 100.0 1.1E-41 3.6E-46  364.2  21.3  258  669-934    18-286 (318)
179 1vzo_A Ribosomal protein S6 ki 100.0   3E-42   1E-46  379.8  17.5  254  673-934    51-324 (355)
180 3kex_A Receptor tyrosine-prote 100.0 3.7E-42 1.3E-46  372.9  17.7  252  673-932    10-270 (325)
181 3byv_A Rhoptry kinase; malaria 100.0   7E-43 2.4E-47  387.0  12.1  247  672-934    69-362 (377)
182 2b9h_A MAP kinase FUS3, mitoge 100.0 3.9E-41 1.3E-45  366.1  25.5  251  675-934    10-308 (353)
183 3coi_A Mitogen-activated prote 100.0 3.6E-41 1.2E-45  368.6  25.5  247  676-934    24-308 (353)
184 1fvr_A Tyrosine-protein kinase 100.0 1.6E-41 5.4E-46  367.1  22.3  252  673-932    22-294 (327)
185 1byg_A CSK, protein (C-termina 100.0 8.4E-42 2.9E-46  360.0  19.6  249  670-931    15-266 (278)
186 3f66_A Hepatocyte growth facto 100.0 4.3E-41 1.5E-45  357.5  25.1  250  675-931    24-284 (298)
187 1z57_A Dual specificity protei 100.0 2.6E-41   9E-46  362.3  23.7  250  673-934    11-331 (339)
188 3i6u_A CDS1, serine/threonine- 100.0 6.8E-42 2.3E-46  386.3  20.1  252  675-934   134-402 (419)
189 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-41   5E-46  392.0  23.3  254  669-931   213-471 (495)
190 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-42   5E-47  383.2  14.3  251  675-934    61-355 (371)
191 2wqm_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45  359.6  25.4  254  674-932    30-291 (310)
192 2yfx_A Tyrosine-protein kinase 100.0 8.3E-42 2.8E-46  369.3  19.7  256  672-934    26-300 (327)
193 2ycf_A Serine/threonine-protei 100.0 7.7E-42 2.6E-46  368.8  19.3  251  676-934    10-277 (322)
194 3cek_A Dual specificity protei 100.0 2.6E-41   9E-46  362.7  23.0  256  671-934    23-295 (313)
195 3pls_A Macrophage-stimulating  100.0 6.6E-41 2.2E-45  354.8  25.8  249  677-932    22-281 (298)
196 2izr_A Casein kinase I isoform 100.0 1.8E-41 6.3E-46  367.6  22.0  246  675-931     8-274 (330)
197 1u46_A ACK-1, activated CDC42  100.0 1.1E-41 3.6E-46  359.7  19.3  255  672-932    14-278 (291)
198 2eva_A TAK1 kinase - TAB1 chim 100.0 5.4E-41 1.8E-45  361.4  25.1  245  673-932     5-257 (307)
199 2i6l_A Mitogen-activated prote 100.0 2.8E-41 9.5E-46  359.9  22.6  250  675-934    10-308 (320)
200 1zy4_A Serine/threonine-protei 100.0 1.8E-41 6.2E-46  357.9  20.8  248  676-934     6-286 (303)
201 1j1b_A Glycogen synthase kinas 100.0 3.2E-41 1.1E-45  380.9  23.9  246  676-934    54-339 (420)
202 3kvw_A DYRK2, dual specificity 100.0   8E-41 2.7E-45  379.0  27.0  248  675-934    96-411 (429)
203 3aln_A Dual specificity mitoge 100.0 1.9E-41 6.3E-46  366.1  20.5  257  669-934    15-288 (327)
204 3lxl_A Tyrosine-protein kinase 100.0 2.2E-41 7.7E-46  366.0  20.9  253  673-932    20-297 (327)
205 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.5E-41 1.2E-45  384.1  23.1  253  669-931   177-433 (452)
206 3lzb_A Epidermal growth factor 100.0 2.7E-41 9.3E-46  367.8  20.8  252  673-932    12-272 (327)
207 4e7w_A Glycogen synthase kinas 100.0 5.1E-41 1.7E-45  375.9  23.2  248  675-934    39-324 (394)
208 2qkw_B Protein kinase; three-h 100.0 9.2E-42 3.1E-46  368.1  15.8  255  672-933    35-310 (321)
209 3e3p_A Protein kinase, putativ 100.0 5.6E-41 1.9E-45  365.9  21.4  251  674-934    21-317 (360)
210 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.2E-42 2.1E-46  366.7  13.6  259  667-932    24-296 (319)
211 3mdy_A Bone morphogenetic prot 100.0   1E-40 3.5E-45  359.3  22.9  246  675-932    36-325 (337)
212 2eu9_A Dual specificity protei 100.0 1.7E-40 5.7E-45  359.0  24.3  249  674-934    17-336 (355)
213 3uim_A Brassinosteroid insensi 100.0 3.9E-42 1.3E-46  370.6  11.4  260  668-933    22-306 (326)
214 3op5_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46  372.7  17.7  253  672-931    31-322 (364)
215 3g2f_A Bone morphogenetic prot 100.0 5.5E-41 1.9E-45  362.5  20.3  249  671-931     8-311 (336)
216 2h8h_A Proto-oncogene tyrosine 100.0 8.4E-41 2.9E-45  389.5  22.5  254  669-932   260-517 (535)
217 3lxp_A Non-receptor tyrosine-p 100.0   2E-40 6.7E-45  358.3  23.3  248  676-931    31-303 (318)
218 3ll6_A Cyclin G-associated kin 100.0   1E-40 3.6E-45  358.0  20.7  254  670-933    22-303 (337)
219 3c1x_A Hepatocyte growth facto 100.0 6.2E-41 2.1E-45  373.7  19.6  250  676-932    89-349 (373)
220 2vx3_A Dual specificity tyrosi 100.0 3.4E-40 1.2E-44  366.1  25.0  252  673-934    51-375 (382)
221 2ozo_A Tyrosine-protein kinase 100.0 1.9E-40 6.6E-45  393.0  24.4  253  671-931   330-591 (613)
222 2h34_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45  356.9  21.7  252  674-931    32-289 (309)
223 2v62_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45  367.7  17.0  252  672-932    33-322 (345)
224 3uzp_A CKI-delta, CKID, casein 100.0   5E-40 1.7E-44  347.7  24.1  247  675-931     8-273 (296)
225 3rgf_A Cyclin-dependent kinase 100.0 1.2E-40 4.3E-45  372.4  20.3  248  677-934    21-336 (405)
226 1q8y_A SR protein kinase; tran 100.0 1.4E-40 4.7E-45  363.9  19.7  250  673-934    16-336 (373)
227 2iwi_A Serine/threonine-protei 100.0 9.7E-41 3.3E-45  357.6  17.9  247  672-934    27-286 (312)
228 2a19_B Interferon-induced, dou 100.0 1.7E-40 5.7E-45  348.7  19.2  241  676-934    11-270 (284)
229 1b6c_B TGF-B superfamily recep 100.0 3.6E-40 1.2E-44  356.4  22.4  245  676-932    42-330 (342)
230 4hgt_A Casein kinase I isoform 100.0 5.2E-40 1.8E-44  346.9  22.9  246  676-931     9-273 (296)
231 2nru_A Interleukin-1 receptor- 100.0 1.4E-40 4.8E-45  354.9  18.5  249  678-932    33-300 (307)
232 2buj_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45  357.3  17.5  254  671-932    24-300 (317)
233 3a99_A Proto-oncogene serine/t 100.0 6.8E-41 2.3E-45  362.7  15.5  247  672-934    39-296 (320)
234 2w1i_A JAK2; chromosomal rearr 100.0 6.3E-40 2.2E-44  355.0  22.1  252  672-931    37-315 (326)
235 4fl3_A Tyrosine-protein kinase 100.0 6.1E-40 2.1E-44  390.6  22.8  252  672-931   364-624 (635)
236 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.2E-40 1.8E-44  361.6  20.4  246  669-930    58-330 (365)
237 3fhr_A MAP kinase-activated pr 100.0 6.3E-40 2.2E-44  358.3  20.2  246  676-934    28-290 (336)
238 4eut_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44  367.1  18.6  251  675-932     8-303 (396)
239 3gxj_A TGF-beta receptor type- 100.0 5.4E-42 1.8E-46  363.3   1.2  245  676-932     3-291 (303)
240 2jii_A Serine/threonine-protei 100.0 8.7E-40   3E-44  358.0  18.7  246  673-931    39-329 (352)
241 3p23_A Serine/threonine-protei 100.0   1E-39 3.6E-44  371.1  19.1  253  671-934    19-286 (432)
242 2j0j_A Focal adhesion kinase 1 100.0 6.2E-39 2.1E-43  383.2  24.5  255  670-932   384-645 (656)
243 2rio_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43  361.4  22.4  246  676-934    15-298 (434)
244 3sv0_A Casein kinase I-like; t 100.0 1.9E-38 6.3E-43  366.8  22.1  247  675-931     6-271 (483)
245 3m2w_A MAP kinase-activated pr 100.0 4.5E-38 1.5E-42  336.5  21.2  225  676-934    17-259 (299)
246 2vuw_A Serine/threonine-protei 100.0 1.7E-39   6E-44  353.0   8.1  244  673-934    17-334 (336)
247 3dzo_A Rhoptry kinase domain;  100.0 2.4E-38 8.3E-43  356.7  15.4  246  673-934    75-366 (413)
248 3qa8_A MGC80376 protein; kinas 100.0 1.3E-37 4.4E-42  372.1  13.9  253  675-934    13-300 (676)
249 2pzi_A Probable serine/threoni 100.0 5.7E-37 1.9E-41  366.5  15.7  238  673-934    77-323 (681)
250 3uqc_A Probable conserved tran 100.0 3.2E-36 1.1E-40  323.1  19.8  223  674-932    29-259 (286)
251 4azs_A Methyltransferase WBDD; 100.0 1.2E-30   4E-35  307.3   2.9  185  683-874   241-436 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 7.2E-27 2.5E-31  273.4   6.3  185  680-877   340-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.7E-22 5.8E-27  217.4  11.4  145  677-849    91-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 6.9E-19 2.4E-23  186.2  13.2  138  677-826    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 1.5E-16 5.2E-21  179.7   8.0  136  678-826    97-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 6.9E-12 2.4E-16  131.0   9.3  141  676-824    14-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 1.9E-10 6.5E-15  118.4   9.0  135  676-824    20-213 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 3.9E-10 1.3E-14  123.8  10.6  142  680-825    42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 2.1E-09 7.3E-14  115.4   7.7  185  682-877    26-288 (304)
260 3r70_A Aminoglycoside phosphot  98.7 5.7E-08   2E-12  105.4  12.8  179  680-872    41-294 (320)
261 3tdw_A Gentamicin resistance p  98.4   3E-06   1E-10   91.6  14.7  135  681-825    24-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.4 1.5E-06   5E-11   90.9  11.4  132  683-824    31-222 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.3 1.7E-06 5.7E-11   96.2  12.0   76  678-760    43-121 (362)
264 3ats_A Putative uncharacterize  98.2   2E-06 6.9E-11   93.9   7.6   84  678-761    22-121 (357)
265 3d1u_A Putative fructosamine-3  98.1 1.2E-05 4.1E-10   86.7  10.7   76  679-760    18-97  (288)
266 2q83_A YTAA protein; 2635576,   98.0 2.5E-05 8.4E-10   83.7  12.8  139  681-825    37-252 (346)
267 2olc_A MTR kinase, methylthior  97.9   3E-05   1E-09   86.2  10.1   77  680-758    34-120 (397)
268 3jr1_A Putative fructosamine-3  97.7 0.00015 5.2E-09   79.3  11.1   76  680-760    40-118 (312)
269 2pyw_A Uncharacterized protein  97.5 0.00019 6.6E-09   80.6   9.8   76  795-872   232-312 (420)
270 2yle_A Protein spire homolog 1  97.3 0.00088   3E-08   70.2  10.7  140  757-931    32-194 (229)
271 2ppq_A HSK, HK, homoserine kin  97.3 0.00086   3E-08   71.8  10.4  145  677-825    23-217 (322)
272 3csv_A Aminoglycoside phosphot  97.2 0.00077 2.6E-08   72.9   9.3  137  682-825    24-217 (333)
273 3dxq_A Choline/ethanolamine ki  97.2 0.00071 2.4E-08   72.3   8.6  135  681-825    23-202 (301)
274 3f7w_A Putative fructosamine-3  97.2  0.0016 5.5E-08   69.0  10.9   78  676-759    15-96  (288)
275 1nw1_A Choline kinase (49.2 KD  96.9   0.002 6.9E-08   73.2   9.3   70  681-758    78-157 (429)
276 3i1a_A Spectinomycin phosphotr  96.7  0.0067 2.3E-07   66.4  11.8   30  796-825   207-236 (339)
277 2qg7_A Ethanolamine kinase PV0  96.6  0.0059   2E-07   70.2  10.4   73  681-760   113-188 (458)
278 3feg_A Choline/ethanolamine ki  96.6  0.0043 1.5E-07   69.7   8.9  137  682-825    56-254 (379)
279 1zyl_A Hypothetical protein YI  96.6   0.015 5.1E-07   62.3  12.6  138  682-825    32-223 (328)
280 3c5i_A Choline kinase; choline  96.6  0.0029   1E-07   69.5   7.2   72  681-759    38-120 (369)
281 3isr_A Transglutaminase-like e  96.4  0.0038 1.3E-07   68.0   6.7  101  196-315   128-230 (293)
282 3f2s_A CK, chetk-alpha, cholin  95.8   0.029 9.9E-07   63.5  10.4  145  676-825    53-280 (401)
283 3kd4_A Putative protease; stru  95.1   0.065 2.2E-06   62.3  10.5  106  196-316   230-343 (506)
284 2f4m_A Peptide N-glycanase; gl  94.8   0.022 7.5E-07   62.0   4.9   49  262-315   138-187 (295)
285 3mes_A Choline kinase; malaria  93.9   0.074 2.5E-06   60.6   7.1   72  681-759    75-156 (424)
286 3g15_A CK, chetk-alpha, cholin  93.1    0.25 8.5E-06   55.2   9.6   29  797-825   246-280 (401)
287 1x3z_A Peptide: N-glycanase; h  92.4   0.095 3.2E-06   57.8   4.7   48  263-315   180-228 (335)
288 4ann_A ESSB; membrane protein,  81.2     2.3 7.9E-05   44.2   6.6  116  731-877    43-158 (215)
289 3cxl_A N-chimerin; SH2, RHO-GA  80.3   0.097 3.3E-06   60.1  -4.5   60  680-742   146-213 (463)
290 1vjj_A Protein-glutamine gluta  72.0     2.1 7.3E-05   51.4   3.7   78  211-291   211-296 (692)
291 4ano_A ESSB; membrane protein,  71.3     4.3 0.00015   42.3   5.4  115  731-877    48-163 (219)
292 2q3z_A Transglutaminase 2; tra  69.6     2.4 8.1E-05   51.0   3.4   31  262-292   272-302 (687)
293 2d3g_P Ubiquitin interacting m  64.2     2.4 8.2E-05   29.5   1.1   14   75-90      4-17  (26)
294 1cja_A Protein (actin-fragmin   62.8      35  0.0012   37.8  10.6  146  672-825    62-237 (342)
295 1g0d_A Protein-glutamine gamma  56.6     7.4 0.00025   46.8   4.3   80  210-292   210-297 (695)
296 2x6h_A GH13170P, VPS34, phosph  51.0      61  0.0021   39.2  10.9   45  774-824   529-575 (696)
297 3d9w_A Putative acetyltransfer  47.0      13 0.00045   40.1   4.1  102  190-318    32-139 (293)
298 1ex0_A Coagulation factor XIII  46.7     9.8 0.00034   46.0   3.2   32  261-292   308-339 (731)
299 1e2t_A NAT, N-hydroxyarylamine  46.6      17 0.00059   39.0   4.9   98  190-316    22-126 (284)
300 1w4t_A Arylamine N-acetyltrans  39.3      24 0.00083   38.2   4.6   99  190-316    43-149 (299)
301 3ls8_A Phosphatidylinositol 3-  38.2 1.4E+02  0.0049   35.5  11.2   82  736-824   402-501 (614)
302 2bsz_A Arylamine N-acetyltrans  35.0      30   0.001   37.0   4.4   99  190-316    23-128 (278)
303 3lnb_A N-acetyltransferase fam  34.4      28 0.00094   38.0   4.1   54  263-317    95-155 (309)
304 2ija_A Arylamine N-acetyltrans  31.6      30   0.001   37.3   3.7   53  263-316    69-128 (295)
305 3hhm_A Phosphatidylinositol-4,  26.9   2E+02  0.0068   36.6  10.3   60  759-824   899-961 (1091)
306 2vfb_A Arylamine N-acetyltrans  22.6      66  0.0023   34.3   4.4   53  263-316    66-128 (280)
307 1ffk_I Ribosomal protein L15E;  22.0      32  0.0011   35.0   1.7   37  162-198   106-152 (194)
308 3oja_A Leucine-rich immune mol  21.6      10 0.00034   43.2  -2.4   30  716-745   322-351 (487)
309 1w5r_A Arylamine N-acetyltrans  21.5      61  0.0021   34.6   3.8   99  190-316    22-131 (278)
310 3jyw_L 60S ribosomal protein L  20.4      29   0.001   35.2   1.0   35  162-196   106-150 (192)

No 1  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=7.8e-56  Score=493.34  Aligned_cols=255  Identities=24%  Similarity=0.422  Sum_probs=226.5

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++++.||+|+||+||+|++  +|+.||||++............+.+|+.+|++|+|||||+++++|++++.+|||
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            357999999999999999999987  588999999988877777788899999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          752 TEFLPRGSLFRILHR-PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       752 mEy~~gGsL~dlL~~-~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+||+|.++|.. ....+++..++.|+.||+.||.|||++|  ||||||||+||||+.+|.+||+|||+++......
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            999999999999964 3456799999999999999999999999  9999999999999999999999999998775443


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      ......+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++.++.. ...+.++..+++++++||.
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~-~~~~~~~~~~s~~~~~li~  258 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS-GSFPPVSLHYSYDLRSLVS  258 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-TCCCCCCTTSCHHHHHHHH
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc-CCCCCCCccCCHHHHHHHH
Confidence            333456899999999999999999999999999999999999999999999888887753 3345677889999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||+++|||+|||
T Consensus       259 ~~L~~d---P~~R~s~~e~l~hp~  279 (350)
T 4b9d_A          259 QLFKRN---PRDRPSVNSILEKGF  279 (350)
T ss_dssp             HHTCSS---GGGSCCHHHHHTSHH
T ss_pred             HHccCC---hhHCcCHHHHhcCHH
Confidence            999999   999999999999998


No 2  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2.6e-54  Score=480.46  Aligned_cols=251  Identities=28%  Similarity=0.399  Sum_probs=225.4

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .+.|++.++||+|+||+||+|++  +|+.||||++.......  .+.+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH--HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            35799999999999999999987  58899999997654322  345789999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS  832 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~  832 (935)
                      |||++|+|.+++.+  ..+++..++.|+.||+.||+|||++|  ||||||||+||||+.+|++||+|||+++........
T Consensus       151 Ey~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          151 EFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             CCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             eCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence            99999999999976  46999999999999999999999999  999999999999999999999999999987665455


Q ss_pred             CCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCcCcHHHHHHHHH
Q 002331          833 SKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN-RRLEIPKELDPLVARIIWE  911 (935)
Q Consensus       833 ~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~-~r~~ip~~ls~~L~dLI~q  911 (935)
                      ..+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++..+.... .....+..+++++++||.+
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  306 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR  306 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence            567899999999999999999999999999999999999999999999988887765322 1233446789999999999


Q ss_pred             HHhhCCCCcCCCcCHHHHHhCcC
Q 002331          912 CWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       912 CL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||+.|   |.+||+++|||+|||
T Consensus       307 ~L~~d---P~~R~ta~e~l~Hp~  326 (346)
T 4fih_A          307 LLVRD---PAQRATAAELLKHPF  326 (346)
T ss_dssp             HSCSS---TTTSCCHHHHTTCGG
T ss_pred             HcCCC---hhHCcCHHHHhcCHh
Confidence            99999   999999999999999


No 3  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.4e-54  Score=476.10  Aligned_cols=251  Identities=22%  Similarity=0.367  Sum_probs=226.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      ++|++++.||+|+||+||+|++  +++.||||++.+.... ......+.+|+++|++|+|||||+++++|++++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            6799999999999999999987  6889999999765321 223567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC--c
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT--F  830 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~--~  830 (935)
                      |||+||+|++++.+. +.+++..++.|+.||+.||+|||+++  ||||||||+||||+.+|++||+|||+++.....  .
T Consensus       112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            999999999999763 47999999999999999999999999  999999999999999999999999999976432  2


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      ....+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..++...+.  .....+|..+++++++||.
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~dli~  266 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII--KLEYDFPEKFFPKARDLVE  266 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHHHHHHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCcccCHHHHHHHH
Confidence            23456799999999999999999999999999999999999999999999988888875  3456788999999999999


Q ss_pred             HHHhhCCCCcCCCcCHHH------HHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQ------LSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~E------ILqHPF  934 (935)
                      +||+.|   |.+||+++|      |++|||
T Consensus       267 ~lL~~d---p~~R~t~~e~~~~~~i~~Hp~  293 (311)
T 4aw0_A          267 KLLVLD---ATKRLGCEEMEGYGPLKAHPF  293 (311)
T ss_dssp             HHSCSS---GGGSTTSGGGTCHHHHHTSGG
T ss_pred             HHccCC---HhHCcChHHHcCCHHHHCCCC
Confidence            999999   999999987      689998


No 4  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.1e-53  Score=464.53  Aligned_cols=250  Identities=31%  Similarity=0.471  Sum_probs=219.9

Q ss_pred             eeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc----CCceEEE
Q 002331          678 LVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR----PPNLSII  751 (935)
Q Consensus       678 y~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~----~~~l~LV  751 (935)
                      |++.++||+|+||+||+|.+  ++..||||++............|.+|+.+|++|+|||||+++++|.+    +..+|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            57888999999999999987  57789999998877777778889999999999999999999999865    3558999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEEEeccccccccCCc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||++|+|.+++.+. ..+++..++.|+.||+.||+|||+++++||||||||+||||+ .+|.+||+|||+|+..... 
T Consensus       108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-  185 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-  185 (290)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred             EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence            9999999999999763 479999999999999999999999887899999999999998 4899999999999865433 


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP-MQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                       ...+.+||+.|||||++.+ .|+.++|||||||+||||++|++||.+... ..+...+.....+..++..+++++++||
T Consensus       186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  263 (290)
T 3fpq_A          186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII  263 (290)
T ss_dssp             -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred             -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence             2345789999999999976 589999999999999999999999987544 4555555544455567778899999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||+.|   |.+|||++|||+|||
T Consensus       264 ~~~L~~d---P~~R~s~~e~l~Hp~  285 (290)
T 3fpq_A          264 EGCIRQN---KDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             HHHccCC---hhHCcCHHHHhcCcc
Confidence            9999999   999999999999999


No 5  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=8.9e-55  Score=476.31  Aligned_cols=254  Identities=26%  Similarity=0.392  Sum_probs=220.5

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      +..++|++++.||+|+||+||+|++     .++.||||++............+.+|+.+|++++|||||+++++|++++.
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~  100 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK  100 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            3457899999999999999999976     36789999997654333233467889999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|||||||+||+|.+++.+. ..+++..+..|+.||+.||+|||++|  ||||||||+||||+.+|++||+|||+|+...
T Consensus       101 ~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          101 LYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EEEEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEEEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            99999999999999999764 47999999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      .......+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..++...+.  .....+|..+++++++
T Consensus       178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~  255 (304)
T 3ubd_A          178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQS  255 (304)
T ss_dssp             ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred             CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH--cCCCCCCCcCCHHHHH
Confidence            54445567899999999999999999999999999999999999999999999998888774  3456788999999999


Q ss_pred             HHHHHHhhCCCCcCCCcC-----HHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTS-----QAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPS-----a~EILqHPF  934 (935)
                      ||.+||+.|   |.+||+     ++||++|||
T Consensus       256 li~~~L~~d---P~~R~ta~~~~~~eil~Hp~  284 (304)
T 3ubd_A          256 LLRMLFKRN---PANRLGAGPDGVEEIKRHSF  284 (304)
T ss_dssp             HHHHHTCSS---GGGSTTCSTTTHHHHHTSGG
T ss_pred             HHHHHcccC---HHHCCCCCcCCHHHHHcCcc
Confidence            999999999   999998     689999998


No 6  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2e-53  Score=459.53  Aligned_cols=249  Identities=27%  Similarity=0.431  Sum_probs=209.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      ++|++++.||+|+||+||+|++  +|+.||||++....... .....+.+|+.+|++++|||||+++++|.+++.+||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999986  68899999998765433 34567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS  832 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~  832 (935)
                      ||| +|+|.+++.+. ..+++..+..|+.||+.||+|||++|  ||||||||+||||+.++++||+|||+|+..... ..
T Consensus        93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~~  167 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NF  167 (275)
T ss_dssp             ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred             eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCC-Cc
Confidence            999 67999998764 47999999999999999999999999  999999999999999999999999999876543 23


Q ss_pred             CCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHH
Q 002331          833 SKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWE  911 (935)
Q Consensus       833 ~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~q  911 (935)
                      ..+.+||+.|||||++.+..+ +.++|||||||++|+|++|++||.+.+..++...+.  .....+|..+++++++||.+
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~~  245 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGLIKR  245 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHHHH
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHH
Confidence            345789999999999998876 689999999999999999999999998888877774  34567788999999999999


Q ss_pred             HHhhCCCCcCCCcCHHHHHhCcC
Q 002331          912 CWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       912 CL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||+.|   |.+|||++|+|+|||
T Consensus       246 ~L~~d---P~~R~s~~eil~hpw  265 (275)
T 3hyh_A          246 MLIVN---PLNRISIHEIMQDDW  265 (275)
T ss_dssp             HSCSS---GGGSCCHHHHHHCHH
T ss_pred             HccCC---hhHCcCHHHHHcCcc
Confidence            99999   999999999999998


No 7  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.2e-53  Score=482.88  Aligned_cols=252  Identities=29%  Similarity=0.408  Sum_probs=226.7

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      +.+.|+++++||+|+||.||+|++  +|+.||||++......  ..+.+.+|+.+|+.|+|||||+++++|.+++.+|||
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV  226 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  226 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence            346799999999999999999987  5889999999765432  234578999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      ||||+||+|.+++..  ..+++..+..|+.||+.||+|||++|  ||||||||+||||+.+|+|||+|||+++.......
T Consensus       227 mEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          227 MEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             EECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             EeCCCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence            999999999999975  35999999999999999999999999  99999999999999999999999999998765545


Q ss_pred             cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCcCcHHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN-RRLEIPKELDPLVARIIW  910 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~-~r~~ip~~ls~~L~dLI~  910 (935)
                      ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+++..+.... .....+..+++++++||.
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence            5567899999999999999999999999999999999999999999999988887775332 233455679999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||++.|||+|||
T Consensus       383 ~~L~~d---P~~R~ta~ell~Hp~  403 (423)
T 4fie_A          383 RLLVRD---PAQRATAAELLKHPF  403 (423)
T ss_dssp             HHSCSS---TTTSCCHHHHTTCGG
T ss_pred             HHcCCC---hhHCcCHHHHhcCHH
Confidence            999999   999999999999999


No 8  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.1e-52  Score=460.30  Aligned_cols=255  Identities=33%  Similarity=0.560  Sum_probs=217.8

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      ..|+|+.++|+++++||+|+||+||+|++++ .||||+++.........+.|.+|+.+|++++|||||++++++.+ +.+
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~  106 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL  106 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence            4578999999999999999999999998765 59999998776677778899999999999999999999998865 568


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |||||||++|+|.++|......+++..++.|+.||+.||+|||+++  ||||||||+||||++++.+||+|||+|+....
T Consensus       107 ~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             EEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            9999999999999999877778999999999999999999999998  99999999999999999999999999987643


Q ss_pred             C--cccCCCCCCCCCccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cc---cCCCC
Q 002331          829 T--FLSSKSTAGTPEWMAPEVLRN---EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN-RR---LEIPK  899 (935)
Q Consensus       829 ~--~~~~~s~~GT~~Y~APEvl~g---~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~-~r---~~ip~  899 (935)
                      .  .......+||+.|||||++.+   ..|+.++|||||||+||||+||+.||.+.+....+..+.... ..   ..++.
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  264 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK  264 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCT
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccc
Confidence            2  122345689999999999964   358999999999999999999999999877655444332222 22   24567


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHH
Q 002331          900 ELDPLVARIIWECWQTGWSSLHIRTSQAQLS  930 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~kRPSa~EIL  930 (935)
                      .+++.+.+||.+||+.|   |.+||++.+|+
T Consensus       265 ~~~~~l~~li~~cl~~d---P~~RPs~~ei~  292 (307)
T 3omv_A          265 NCPKAMKRLVADCVKKV---KEERPLFPQIL  292 (307)
T ss_dssp             TSCHHHHHHHHHHTCSS---STTSCCHHHHH
T ss_pred             cchHHHHHHHHHHcCCC---HhHCcCHHHHH
Confidence            89999999999999999   99999999874


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.4e-52  Score=464.89  Aligned_cols=244  Identities=27%  Similarity=0.362  Sum_probs=213.7

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++.++||+|+||+||+|++  +|+.||||++......       .+|+.+|+.|+|||||+++++|.+++.+|||
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            446799999999999999999987  5889999999865432       4699999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC-cEEEEeccccccccCCc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW-NVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g-~VKL~DFGlA~~~~~~~  830 (935)
                      ||||++|+|.++|++. ..+++..++.|+.||+.||+|||+++  ||||||||+||||+.+| ++||+|||+++......
T Consensus       129 mEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             ECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             EeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            9999999999999764 47999999999999999999999999  99999999999999987 69999999998765321


Q ss_pred             -----ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-cCCCCcCcHH
Q 002331          831 -----LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR-LEIPKELDPL  904 (935)
Q Consensus       831 -----~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r-~~ip~~ls~~  904 (935)
                           ......+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..++...+.....+ ..+|..+++.
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~  285 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPL  285 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHH
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHH
Confidence                 1223468999999999999999999999999999999999999999988777666666543333 3578899999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHH
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLS  930 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EIL  930 (935)
                      +.+||.+||+.|   |.+|||+.||+
T Consensus       286 ~~~li~~~L~~d---P~~R~sa~el~  308 (336)
T 4g3f_A          286 TAQAIQEGLRKE---PVHRASAMELR  308 (336)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHH
T ss_pred             HHHHHHHHccCC---HhHCcCHHHHH
Confidence            999999999999   99999999984


No 10 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7.3e-52  Score=457.27  Aligned_cols=254  Identities=33%  Similarity=0.516  Sum_probs=219.4

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEEC-------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWN-------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT  743 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~-------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~  743 (935)
                      .++..++|.+.++||+|+||+||+|++.       ++.||||++...  .....+.|.+|+++|++|+|||||+++++|.
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~  113 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCT  113 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3456688999999999999999999863       678999998654  3556778999999999999999999999999


Q ss_pred             cCCceEEEEeeCCCCCHHHHHcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee
Q 002331          744 RPPNLSIITEFLPRGSLFRILHRPH--------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV  809 (935)
Q Consensus       744 ~~~~l~LVmEy~~gGsL~dlL~~~~--------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL  809 (935)
                      +.+.+|||||||++|+|.+++++..              .++++..++.|+.||+.||.|||+++  ||||||||+||||
T Consensus       114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl  191 (329)
T 4aoj_A          114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV  191 (329)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEE
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEE
Confidence            9999999999999999999997532              45899999999999999999999998  9999999999999


Q ss_pred             cCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHH
Q 002331          810 DKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVG  886 (935)
Q Consensus       810 d~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~  886 (935)
                      +.++.+||+|||+++......  .......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+++.
T Consensus       192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~  271 (329)
T 4aoj_A          192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID  271 (329)
T ss_dssp             ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH
T ss_pred             CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999998764332  22334679999999999999999999999999999999999 899999999988887


Q ss_pred             HhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          887 AVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       887 ~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+. ...++.+|..+++++.+||.+||+.|   |.+||++.+|+++
T Consensus       272 ~i~-~g~~~~~p~~~~~~~~~li~~cl~~d---P~~RPs~~ei~~~  313 (329)
T 4aoj_A          272 CIT-QGRELERPRACPPEVYAIMRGCWQRE---PQQRHSIKDVHAR  313 (329)
T ss_dssp             HHH-HTCCCCCCTTCCHHHHHHHHHHCCSS---TTTSCCHHHHHHH
T ss_pred             HHH-cCCCCCCcccccHHHHHHHHHHcCcC---hhHCcCHHHHHHH
Confidence            775 44577889999999999999999999   9999999999864


No 11 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=2.3e-52  Score=455.66  Aligned_cols=252  Identities=31%  Similarity=0.537  Sum_probs=222.5

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      +|..++|.+.+.||+|+||+||+|++       +++.||||++...  .....+.|.+|+++|++|+|||||+++++|.+
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~   86 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE   86 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            46678999999999999999999986       3668999998754  35567789999999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC
Q 002331          745 PPNLSIITEFLPRGSLFRILHRP------------HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN  812 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~------------~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~  812 (935)
                      ++.+|||||||++|+|.++|++.            ...+++..++.|+.||+.||.|||+++  ||||||||+||||+.+
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~  164 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGEN  164 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGG
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCC
Confidence            99999999999999999999642            246899999999999999999999998  9999999999999999


Q ss_pred             CcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 002331          813 WNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVG  889 (935)
Q Consensus       813 g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~  889 (935)
                      +.+||+|||+++.......  ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..++...+.
T Consensus       165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  244 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT  244 (299)
T ss_dssp             GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999986544322  2233468999999999999999999999999999999998 899999999998888775


Q ss_pred             ccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          890 FQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       890 ~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                       ...++.+|..+++++.+||.+||+.|   |.+||++.+|++
T Consensus       245 -~~~~~~~p~~~~~~~~~li~~cl~~d---P~~RPs~~~i~~  282 (299)
T 4asz_A          245 -QGRVLQRPRTCPQEVYELMLGCWQRE---PHMRKNIKGIHT  282 (299)
T ss_dssp             -HTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             -cCCCCCCCccchHHHHHHHHHHcCCC---hhHCcCHHHHHH
Confidence             44567789999999999999999999   999999999864


No 12 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=5.2e-52  Score=454.57  Aligned_cols=254  Identities=29%  Similarity=0.485  Sum_probs=224.4

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ++...++++.++||+|+||+||+|++       +++.||||++.... .....+.|.+|+.+|++++|||||+++|+|.+
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  100 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK  100 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence            56778899999999999999999986       35789999987543 33445679999999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee
Q 002331          745 PPNLSIITEFLPRGSLFRILHRP---------------HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV  809 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~---------------~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL  809 (935)
                      ++.++||||||++|+|.++|...               ...+++..++.|+.||+.||+|||+++  ||||||||+||||
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl  178 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLV  178 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEE
Confidence            99999999999999999999642               235899999999999999999999998  9999999999999


Q ss_pred             cCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHH
Q 002331          810 DKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVG  886 (935)
Q Consensus       810 d~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~  886 (935)
                      ++++.+||+|||+++......  ......+||+.|||||++.+..|+.++|||||||+||||+| |..||.+.+..++..
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE  258 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred             CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999998764332  22345679999999999999999999999999999999998 899999999998888


Q ss_pred             HhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          887 AVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       887 ~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+. ...++++|..+++++.+||.+||+.|   |.+||++.+|+++
T Consensus       259 ~i~-~~~~~~~p~~~~~~~~~li~~C~~~d---P~~RPs~~ei~~~  300 (308)
T 4gt4_A          259 MIR-NRQVLPCPDDCPAWVYALMIECWNEF---PSRRPRFKDIHSR  300 (308)
T ss_dssp             HHH-TTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHH-cCCCCCCcccchHHHHHHHHHHcCCC---hhHCcCHHHHHHH
Confidence            775 45567789999999999999999999   9999999999875


No 13 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=4.6e-51  Score=455.15  Aligned_cols=260  Identities=30%  Similarity=0.471  Sum_probs=225.1

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEECC-------ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCC-Cceeee
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADWNG-------TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRH-PNVVLF  738 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-------~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~H-PNIVkl  738 (935)
                      +..+|+|+.++|++++.||+|+||+||+|++.+       +.||||++.... .......|.+|+.+|.+++| ||||++
T Consensus        55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            445689999999999999999999999998743       579999987553 34456789999999999965 999999


Q ss_pred             ecccccC-CceEEEEeeCCCCCHHHHHcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCC
Q 002331          739 MGAVTRP-PNLSIITEFLPRGSLFRILHRP---------------HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDL  802 (935)
Q Consensus       739 ~g~~~~~-~~l~LVmEy~~gGsL~dlL~~~---------------~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDL  802 (935)
                      +++|.+. +.++||||||++|+|.++|++.               ...+++..++.|+.||+.||+|||+++  ||||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDL  211 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDL  211 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCcc
Confidence            9998664 5689999999999999999642               235899999999999999999999999  999999


Q ss_pred             CCCCeeecCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002331          803 KSPNLLVDKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGM  879 (935)
Q Consensus       803 KPeNILLd~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~  879 (935)
                      ||+||||++++.+||+|||+|+......  ......+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.
T Consensus       212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999998764322  22344578999999999999999999999999999999998 89999987


Q ss_pred             ChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          880 NPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       880 ~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +..+.+..+.....++.+|..+++++.+||.+||+.|   |.+||++.+|++|
T Consensus       292 ~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~d---P~~RPt~~eil~~  341 (353)
T 4ase_A          292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE---PSQRPTFSELVEH  341 (353)
T ss_dssp             CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcC---hhHCcCHHHHHHH
Confidence            7555444444456778899999999999999999999   9999999999986


No 14 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.4e-50  Score=451.08  Aligned_cols=252  Identities=22%  Similarity=0.328  Sum_probs=216.7

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc------cCCc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT------RPPN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~------~~~~  747 (935)
                      ++|++++.||+|+||+||+|++  +|+.||||++............+.+|+.+|+.|+|||||++++++.      +.+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999987  5889999999877666666778899999999999999999999865      3467


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|||||||+ |+|.+++.+. ..+++..+..|+.||+.||.|||++|  ||||||||+||||+.+|.+||+|||+++...
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            999999996 6899999764 57999999999999999999999999  9999999999999999999999999998654


Q ss_pred             CC----cccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC------
Q 002331          828 NT----FLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE------  896 (935)
Q Consensus       828 ~~----~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~------  896 (935)
                      ..    .....+.+||+.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+.+..+......+.      
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            32    2234567899999999998875 569999999999999999999999999988777766532211110      


Q ss_pred             -----------------------CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          897 -----------------------IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       897 -----------------------ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                             +...+++++.+||.+||+.|   |.+|||++|+|+|||
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d---P~~R~ta~e~L~Hp~  347 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFE---PSARISAAAALRHPF  347 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS---TTTSCCHHHHTTSGG
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCC---hhHCcCHHHHhcCHh
Confidence                                   11346889999999999999   999999999999999


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.3e-50  Score=439.36  Aligned_cols=249  Identities=22%  Similarity=0.324  Sum_probs=197.1

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC-------
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP-------  746 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~-------  746 (935)
                      ++|++++.||+|+||+||+|++  +|+.||||++.... .+...+.+.+|+.+|++|+|||||+++++|.+.+       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            4699999999999999999987  58899999987654 3455677899999999999999999999987544       


Q ss_pred             -----ceEEEEeeCCCCCHHHHHcCCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEe
Q 002331          747 -----NLSIITEFLPRGSLFRILHRPHC--QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSD  819 (935)
Q Consensus       747 -----~l~LVmEy~~gGsL~dlL~~~~~--~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~D  819 (935)
                           .+|||||||++|+|.+++.....  ..++..++.|+.||+.||+|||++|  ||||||||+||||+.++.+||+|
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEcc
Confidence                 37999999999999999976432  3456778899999999999999999  99999999999999999999999


Q ss_pred             ccccccccCCcc------------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHH
Q 002331          820 FGLSRLKHNTFL------------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP-MQVVG  886 (935)
Q Consensus       820 FGlA~~~~~~~~------------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-~eil~  886 (935)
                      ||+|+.......            .....+||+.|||||++.+..|+.++|||||||+||||++   ||..... ...+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~  238 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT  238 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence            999987643211            1234579999999999999999999999999999999996   7865422 22222


Q ss_pred             HhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          887 AVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       887 ~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.. ...+......++.+.+||.+||+.|   |.+||++.|||+|||
T Consensus       239 ~~~~-~~~p~~~~~~~~~~~~li~~~L~~d---P~~Rps~~eil~h~~  282 (299)
T 4g31_A          239 DVRN-LKFPPLFTQKYPCEYVMVQDMLSPS---PMERPEAINIIENAV  282 (299)
T ss_dssp             HHHT-TCCCHHHHHHCHHHHHHHHHHTCSS---GGGSCCHHHHHTSGG
T ss_pred             HHhc-CCCCCCCcccCHHHHHHHHHHcCCC---hhHCcCHHHHhcCHh
Confidence            3321 1112222345677889999999999   999999999999998


No 16 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.2e-48  Score=458.46  Aligned_cols=252  Identities=24%  Similarity=0.362  Sum_probs=225.6

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++++.||+|+||+||+|++  +|+.||||++....  ......+.+|+.+|+.|+|||||+++++|.+.+.+||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~  233 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  233 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            36899999999999999999987  68899999987654  334567889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC--CCcEEEEeccccccccCCc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK--NWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~--~g~VKL~DFGlA~~~~~~~  830 (935)
                      |||+||+|+++|.+....+++..+..|+.||+.||.|||+++  |+||||||+||||+.  .+.+||+|||+++..... 
T Consensus       234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-  310 (573)
T 3uto_A          234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-  310 (573)
T ss_dssp             ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred             eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence            999999999999776678999999999999999999999999  999999999999985  489999999999977543 


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~~L~dL  908 (935)
                      ......+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+.+..+......+  ..+..+++++++|
T Consensus       311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dl  390 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF  390 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred             CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence            22345689999999999999999999999999999999999999999999998888875443322  2335789999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.|+|+|||
T Consensus       391 i~~~L~~d---p~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          391 IRKLLLAD---PNTRMTIHQALEHPW  413 (573)
T ss_dssp             HHTTSCSS---GGGSCCHHHHHHSTT
T ss_pred             HHHHccCC---hhHCcCHHHHhcCcC
Confidence            99999999   999999999999999


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=7.1e-48  Score=430.11  Aligned_cols=246  Identities=22%  Similarity=0.321  Sum_probs=203.1

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++|+++++||+|+||+||+|++     .++.||||++.....    ...+.+|+++|+.+ +|||||+++++|.+.+++|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            6799999999999999999975     357899999866532    34577899999998 6999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC-CcEEEEeccccccccC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN-WNVKVSDFGLSRLKHN  828 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~-g~VKL~DFGlA~~~~~  828 (935)
                      ||||||++|+|.+++.    .+++..+..|+.||+.||+|||++|  ||||||||+||||+.+ +.+||+|||+|+...+
T Consensus        97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            9999999999999994    4899999999999999999999999  9999999999999876 8999999999986543


Q ss_pred             Cc----------------------------ccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002331          829 TF----------------------------LSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGM  879 (935)
Q Consensus       829 ~~----------------------------~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~  879 (935)
                      ..                            ......+||+.|+|||++.+. .|+.++|||||||++|||++|+.||...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            21                            012345799999999999876 4899999999999999999999999654


Q ss_pred             C-hHHHHHHhhcc----------------------------------------------------ccccCCCCcCcHHHH
Q 002331          880 N-PMQVVGAVGFQ----------------------------------------------------NRRLEIPKELDPLVA  906 (935)
Q Consensus       880 ~-~~eil~~I~~~----------------------------------------------------~~r~~ip~~ls~~L~  906 (935)
                      + ..+.+..+...                                                    .........++++++
T Consensus       251 ~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~  330 (361)
T 4f9c_A          251 SDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAY  330 (361)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHH
T ss_pred             CCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHH
Confidence            3 33332222100                                                    000011245788999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||.+||+.|   |.+|||++|+|+|||
T Consensus       331 DLl~~lL~~d---P~~R~ta~eaL~Hp~  355 (361)
T 4f9c_A          331 DLLDKLLDLN---PASRITAEEALLHPF  355 (361)
T ss_dssp             HHHHHHTCSC---TTTSCCHHHHHTSGG
T ss_pred             HHHHHHCcCC---hhHCcCHHHHhcCcc
Confidence            9999999999   999999999999999


No 18 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.5e-48  Score=423.13  Aligned_cols=249  Identities=33%  Similarity=0.525  Sum_probs=199.5

Q ss_pred             CCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC----ceEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP----NLSII  751 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~----~l~LV  751 (935)
                      ++|.+.++||+|+||+||+|+++|+.||||++....   .....++.|+.++.+++|||||++++++.+++    .+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            468999999999999999999999999999986543   22223345666677889999999999997654    47999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS------TPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~------g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      ||||++|+|.+++++  ..+++..+++|+.|++.||+|||.+      .++||||||||+||||+.++.+||+|||+++.
T Consensus        80 ~Ey~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999999976  3589999999999999999999986      22499999999999999999999999999987


Q ss_pred             ccCCcc----cCCCCCCCCCccCcccccCC------CCCchhHHHHHHHHHHHHHcCCCCCCC----------C-----C
Q 002331          826 KHNTFL----SSKSTAGTPEWMAPEVLRNE------PSNEKCDVYSFGVILWELATLKLPWIG----------M-----N  880 (935)
Q Consensus       826 ~~~~~~----~~~s~~GT~~Y~APEvl~g~------~~s~ksDIWSLG~ILyELLTG~~PF~~----------~-----~  880 (935)
                      ......    .....+||+.|||||++.+.      .++.++|||||||+||||+||..||..          .     .
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            644321    12345799999999999765      357799999999999999999766532          1     2


Q ss_pred             hHHHHHHhhccccccCCCCc-----CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 PMQVVGAVGFQNRRLEIPKE-----LDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 ~~eil~~I~~~~~r~~ip~~-----ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ...+...+.....++.+|..     ++..+.+||.+||+.|   |.+|||+.||++.
T Consensus       238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~d---P~~RPt~~ei~~~  291 (303)
T 3hmm_A          238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN---GAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccC---HhHCcCHHHHHHH
Confidence            23444444445556666643     3457899999999999   9999999999863


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.6e-47  Score=456.21  Aligned_cols=254  Identities=23%  Similarity=0.359  Sum_probs=217.5

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC----HHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS----GAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~----~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ..+..++|+++++||+|+||+||+|++  +|+.||||++.+....    .........++.+++.++|||||+++++|++
T Consensus       184 ~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~  263 (689)
T 3v5w_A          184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT  263 (689)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             CCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence            356678999999999999999999987  6889999999754321    1222223344566677799999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+.+|||||||+||+|+++|.+. +.+++..++.|+.||+.||+|||++|  ||||||||+||||+.+|+|||+|||+|+
T Consensus       264 ~~~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          264 PDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLAC  340 (689)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceee
Confidence            99999999999999999999764 47999999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhccccccCCCCc
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLR-NEPSNEKCDVYSFGVILWELATLKLPWIGMN---PMQVVGAVGFQNRRLEIPKE  900 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~-g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~---~~eil~~I~~~~~r~~ip~~  900 (935)
                      .....  ...+.+||+.|||||++. +..|+.++|||||||+||||++|++||.+.+   ..++...+  ......+|..
T Consensus       341 ~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--~~~~~~~p~~  416 (689)
T 3v5w_A          341 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDS  416 (689)
T ss_dssp             ECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--HHCCCCCCTT
T ss_pred             ecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--cCCCCCCCcc
Confidence            76543  235679999999999996 5679999999999999999999999998643   33344333  3455678899


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcC-----HHHHHhCcC
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTS-----QAQLSHKRF  934 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPS-----a~EILqHPF  934 (935)
                      +++++++||.+||+.|   |.+|++     +++|++|||
T Consensus       417 ~S~~a~dLI~~lL~~d---P~~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          417 FSPELRSLLEGLLQRD---VNRRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             SCHHHHHHHHHHTCSC---GGGCTTCSSSTHHHHTTSGG
T ss_pred             CCHHHHHHHHHHccCC---HhHCCCCCCCCHHHHhcCcc
Confidence            9999999999999999   999998     799999998


No 20 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3.9e-46  Score=403.36  Aligned_cols=262  Identities=65%  Similarity=1.076  Sum_probs=226.9

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ....+++.+++|++.+.||+|+||+||+|+++++.||||++............+.+|+.+|++++||||+++++++.+.+
T Consensus        28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             ----CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             CcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34456788899999999999999999999999999999999888777777888999999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHC--QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~--~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+++||||+++++|.+++.+...  .+++..++.++.||+.||.|||++|++|+||||||+||||+.++.+||+|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            99999999999999999986432  3899999999999999999999987779999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      .............||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.....+..++..+++.
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (309)
T 3p86_A          188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ  267 (309)
T ss_dssp             --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH
Confidence            76554444456789999999999999999999999999999999999999999999988888877677788899999999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +.+||.+||+.|   |.+||++.+|++
T Consensus       268 l~~li~~~l~~d---P~~Rps~~~ll~  291 (309)
T 3p86_A          268 VAAIIEGCWTNE---PWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHccCC---hhhCcCHHHHHH
Confidence            999999999999   999999999986


No 21 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=3.9e-46  Score=408.37  Aligned_cols=252  Identities=28%  Similarity=0.426  Sum_probs=228.6

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++.+.||+|+||.||+|++  +|+.||||++............+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            347899999999999999999987  688999999988777777778899999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++...... .
T Consensus        93 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~  168 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-G  168 (328)
T ss_dssp             ECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-C
T ss_pred             EECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-C
Confidence            9999999999998653 46899999999999999999999999  999999999999999999999999999866543 2


Q ss_pred             cCCCCCCCCCccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSN-EKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s-~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      .....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+..++...+.  .....+|..+++++.+||.
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~  246 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIPFYMSTDCENLLK  246 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHH
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHH
Confidence            23457899999999999988874 89999999999999999999999999888887764  3455678889999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||++++|++|||
T Consensus       247 ~~L~~d---P~~R~t~~eil~h~~  267 (328)
T 3fe3_A          247 RFLVLN---PIKRGTLEQIMKDRW  267 (328)
T ss_dssp             HHCCSS---TTTSCCHHHHTTCTT
T ss_pred             HHCCCC---hhHCcCHHHHhcCHh
Confidence            999999   999999999999999


No 22 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.8e-45  Score=395.11  Aligned_cols=252  Identities=27%  Similarity=0.465  Sum_probs=223.5

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++.+.||+|+||+||+|.+  +++.||||++.......  ...+.+|+.+++.++||||++++++|...+.+++|
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH--HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence            346899999999999999999975  68899999987654332  34678999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+++++|.+++.+.  .+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++........
T Consensus        96 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            9999999999999763  5899999999999999999999999  99999999999999999999999999987765544


Q ss_pred             cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-cccccCCCCcCcHHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGF-QNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~-~~~r~~ip~~ls~~L~dLI~  910 (935)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.. .......+..+++.+.+||.
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  251 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred             ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence            45567899999999999999999999999999999999999999999888766655432 22344556789999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||++.++|+|||
T Consensus       252 ~~l~~d---p~~Rps~~ell~h~~  272 (297)
T 3fxz_A          252 RCLEMD---VEKRGSAKELLQHQF  272 (297)
T ss_dssp             HHSCSS---TTTSCCHHHHTTCGG
T ss_pred             HHccCC---hhHCcCHHHHhhChh
Confidence            999999   999999999999998


No 23 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=9.4e-46  Score=407.51  Aligned_cols=254  Identities=23%  Similarity=0.406  Sum_probs=225.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +..++|++++.||+|+||.||+|++  +++.||||++..... .......+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            4557899999999999999999987  588999999875422 1123456789999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++|+|..++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++.....
T Consensus        82 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            999999999999999753 46899999999999999999999999  999999999999999999999999999865443


Q ss_pred             cccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          830 FLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       830 ~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...+...+..  ....+|..+++++++||
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li  236 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--EEIRFPRTLSPEAKSLL  236 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHHHHH
T ss_pred             CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHH
Confidence            3444567899999999999999999999999999999999999999999988887777643  45567888999999999


Q ss_pred             HHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      .+||+.|   |.+||     ++++|++|||
T Consensus       237 ~~lL~~d---P~~R~g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          237 AGLLKKD---PKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             HHHTCSS---TTTSTTCSTTTHHHHHTSGG
T ss_pred             HHHhhcC---HHHhcCCCCCCHHHHHcCCC
Confidence            9999999   99999     9999999998


No 24 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.8e-45  Score=390.85  Aligned_cols=254  Identities=24%  Similarity=0.379  Sum_probs=215.1

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH------------------------HHHHHHHHHHHHH
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG------------------------AALLEFKREVKIM  727 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~------------------------~~~~~f~~Ei~iL  727 (935)
                      ..++|++.+.||+|+||.||+|++  +++.||||++.......                        .....+.+|+.+|
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            347899999999999999999976  57899999987654221                        1235688999999


Q ss_pred             HHcCCCceeeeeccccc--CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCC
Q 002331          728 RRLRHPNVVLFMGAVTR--PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSP  805 (935)
Q Consensus       728 ~~L~HPNIVkl~g~~~~--~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPe  805 (935)
                      ++++||||+++++++.+  ...+++||||+++++|.+++..  ..+++..++.++.||+.||.|||+++  |+||||||+
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~  166 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPS  166 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGG
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHH
Confidence            99999999999999976  5679999999999999887654  46999999999999999999999999  999999999


Q ss_pred             CeeecCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 002331          806 NLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEP---SNEKCDVYSFGVILWELATLKLPWIGMNPM  882 (935)
Q Consensus       806 NILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~---~s~ksDIWSLG~ILyELLTG~~PF~~~~~~  882 (935)
                      ||||+.++.+||+|||+++.............||+.|+|||++.+..   ++.++|||||||++|+|++|+.||.+.+..
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  246 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM  246 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence            99999999999999999987654433334568999999999998765   378999999999999999999999998887


Q ss_pred             HHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          883 QVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       883 eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .....+............+++.+.+||.+||+.|   |.+||++.+|++|||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKN---PESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSC---TTTSCCHHHHTTCHH
T ss_pred             HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcC---hhhCCCHHHHhcCcc
Confidence            7776665444344444678999999999999999   999999999999998


No 25 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=9.7e-46  Score=409.87  Aligned_cols=255  Identities=23%  Similarity=0.351  Sum_probs=220.0

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~  747 (935)
                      .+..++|++.+.||+|+||.||+|++  +++.||||++..... .......+.+|+.+|..+ +||||++++++|.+.+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            35568999999999999999999987  578999999876432 222345678899999998 79999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +||||||+++|+|..++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++...
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~  175 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI  175 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence            99999999999999999763 46999999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      .........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..++...+.  .....+|..+++.+.+
T Consensus       176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~  253 (353)
T 3txo_A          176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLHEDATG  253 (353)
T ss_dssp             C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred             cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHH
Confidence            44344556789999999999999999999999999999999999999999999988888774  3455678889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCH------HHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQ------AQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa------~EILqHPF  934 (935)
                      ||.+||+.|   |.+||++      ++|++|||
T Consensus       254 li~~lL~~d---P~~R~~~~~~~~~~~il~hp~  283 (353)
T 3txo_A          254 ILKSFMTKN---PTMRLGSLTQGGEHAILRHPF  283 (353)
T ss_dssp             HHHHHTCSS---GGGSTTSGGGTCTHHHHTSGG
T ss_pred             HHHHHhhhC---HHHccCCcccCCHHHHhhCCc
Confidence            999999999   9999999      99999998


No 26 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7.9e-45  Score=392.53  Aligned_cols=257  Identities=23%  Similarity=0.301  Sum_probs=215.1

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      +-..++|++++.||+|+||+||+|++ +++.||||++............+.+|+.++++++||||+++++++.++..+++
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   96 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL   96 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence            34458899999999999999999987 68899999987665444456678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++ +|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++......
T Consensus        97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            9999975 888888776677999999999999999999999999  9999999999999999999999999998765544


Q ss_pred             ccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------------
Q 002331          831 LSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--------------  895 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--------------  895 (935)
                      .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+....+......+              
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence            44455678999999999977 568999999999999999999999999876655544432110000              


Q ss_pred             --------------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 --------------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 --------------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                    .+...+++++.+||.+||+.|   |.+||+++++|+|||
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  303 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFD---PNKRISARDAMNHPY  303 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSC---TTTSCCHHHHHTSGG
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCC---hhHCCCHHHHhcCcc
Confidence                          012346789999999999999   999999999999998


No 27 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.8e-45  Score=385.61  Aligned_cols=253  Identities=22%  Similarity=0.306  Sum_probs=215.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||+||+|++  +++.||||++............+.+|+.++++++||||+++++++.+.+.+++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            6899999999999999999987  57889999998776666666778899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccC
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSS  833 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~  833 (935)
                      |+++ +|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++.........
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence            9976 666666554567999999999999999999999999  9999999999999999999999999998776554445


Q ss_pred             CCCCCCCCccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCC-CCCCChHHHHHHhhcccc------------------
Q 002331          834 KSTAGTPEWMAPEVLRNEP-SNEKCDVYSFGVILWELATLKLP-WIGMNPMQVVGAVGFQNR------------------  893 (935)
Q Consensus       834 ~s~~GT~~Y~APEvl~g~~-~s~ksDIWSLG~ILyELLTG~~P-F~~~~~~eil~~I~~~~~------------------  893 (935)
                      ....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+....+.....                  
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence            5668899999999998766 79999999999999999998777 555555555444321100                  


Q ss_pred             ---------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 ---------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 ---------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                               ...+...+++.+++||.+||+.|   |.+||+++|+|+|||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCN---PVQRISAEEALQHPY  285 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             cccccCCcchhhcccccChHHHHHHHHHhccC---hhhCCCHHHHhcCcc
Confidence                     01122357899999999999999   999999999999998


No 28 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=4e-45  Score=404.70  Aligned_cols=254  Identities=24%  Similarity=0.384  Sum_probs=217.3

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +...++|++.+.||+|+||+||+|++  +++.||||++...... .....+.+|+.+|+.++||||+++++++.+.+.++
T Consensus         6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   84 (347)
T 3zgw_A            6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF   84 (347)
T ss_dssp             TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence            34458899999999999999999986  6889999998766543 23456889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++......
T Consensus        85 lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  161 (347)
T 3zgw_A           85 MVLEYCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN  161 (347)
T ss_dssp             EEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred             EEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence            999999999999998653 46999999999999999999999999  999999999999999999999999998765432


Q ss_pred             -cccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          830 -FLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       830 -~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                       .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+..+....+.  .....+|..+++.+.+
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~  239 (347)
T 3zgw_A          162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM--RGKYDVPKWLSPSSIL  239 (347)
T ss_dssp             ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHHHH
T ss_pred             CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHH
Confidence             122345679999999999998875 899999999999999999999999999888887774  3455678889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||+++||++|||
T Consensus       240 li~~~L~~d---P~~Rps~~eil~hp~  263 (347)
T 3zgw_A          240 LLQQMLQVD---PKKRISMKNLLNHPW  263 (347)
T ss_dssp             HHHHHTCSS---GGGSCCHHHHHTCHH
T ss_pred             HHHHHcccC---HhHCcCHHHHhcCcc
Confidence            999999999   999999999999998


No 29 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=7.7e-45  Score=395.75  Aligned_cols=255  Identities=25%  Similarity=0.377  Sum_probs=215.0

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCC--HHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFS--GAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~--~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ++..++|++.+.||+|+||.||++++     .++.||||++......  ......+.+|+.+|+.++||||+++++++..
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   92 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT   92 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence            45568999999999999999999976     5789999999765432  2334567889999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+.+|+||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           93 GGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             SSCEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            99999999999999999999753 46899999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ............+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+.  .....+|..+++.
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~  247 (327)
T 3a62_A          170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL--KCKLNLPPYLTQE  247 (327)
T ss_dssp             ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTCCCCCTTSCHH
T ss_pred             ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHH
Confidence            65443333455689999999999999999999999999999999999999999998888777664  3455678889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          905 VARIIWECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      +.+||.+||+.|   |.+||     ++.++++|||
T Consensus       248 ~~~li~~~L~~d---p~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          248 ARDLLKKLLKRN---AASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             HHHHHHHHSCSC---GGGSTTSSTTTHHHHHHSGG
T ss_pred             HHHHHHHHHhcC---HhhccCCCCCCHHHHHcCCc
Confidence            999999999999   99999     8999999998


No 30 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=4.8e-45  Score=387.85  Aligned_cols=253  Identities=23%  Similarity=0.302  Sum_probs=213.0

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEee
Q 002331          676 EDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEF  754 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmEy  754 (935)
                      ++|++++.||+|+||.||+|++ .++.||||++............+.+|+.+++.++||||+++++++...+.+++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            6899999999999999999987 488999999876543333345678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCC
Q 002331          755 LPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSK  834 (935)
Q Consensus       755 ~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~  834 (935)
                      +++ +|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..........
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence            975 999999876678999999999999999999999999  99999999999999999999999999987654333334


Q ss_pred             CCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-------------------
Q 002331          835 STAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR-------------------  894 (935)
Q Consensus       835 s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r-------------------  894 (935)
                      ...||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+......                   
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence            56789999999999764 5899999999999999999999999998776655543211000                   


Q ss_pred             --------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 --------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 --------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                              ..+...+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  283 (288)
T 1ob3_A          239 TVYEPLPWESFLKGLDESGIDLLSKMLKLD---PNQRITAKQALEHAY  283 (288)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSS---TTTSCCHHHHHTSGG
T ss_pred             ccccCccHHHHhhhcCHHHHHHHHHHcCCC---cccCCCHHHHhcCcc
Confidence                    0122457899999999999999   999999999999998


No 31 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.9e-44  Score=399.68  Aligned_cols=252  Identities=23%  Similarity=0.379  Sum_probs=223.9

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++............+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            5799999999999999999987  58899999998877777777789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC---CcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN---WNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~---g~VKL~DFGlA~~~~~~~  830 (935)
                      |+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+   +.+||+|||++.......
T Consensus       109 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          109 LVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             CCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             cCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            99999999999764 46899999999999999999999999  9999999999999864   459999999998765432


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dL  908 (935)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...+...+.........+  ..+++.+++|
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  264 (362)
T 2bdw_A          186 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL  264 (362)
T ss_dssp             -SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHH
T ss_pred             -ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence             2345689999999999999999999999999999999999999999998888777765433332222  4689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       265 i~~~L~~d---P~~R~t~~e~l~hp~  287 (362)
T 2bdw_A          265 IDSMLTVN---PKKRITADQALKVPW  287 (362)
T ss_dssp             HHHHSCSS---GGGSCCHHHHTTSHH
T ss_pred             HHHHcCCC---hhhCcCHHHHhcCcc
Confidence            99999999   999999999999998


No 32 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2e-44  Score=400.79  Aligned_cols=252  Identities=25%  Similarity=0.401  Sum_probs=221.7

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++|++++.||+|+||.||+|++  +|+.||||++.......    .....+.+|+.+|++++||||++++++|.+...++
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            6799999999999999999987  58899999998654322    13457889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC----cEEEEecccccc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW----NVKVSDFGLSRL  825 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g----~VKL~DFGlA~~  825 (935)
                      +||||+++|+|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++    .+||+|||+++.
T Consensus        92 lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            999999999999999763 47999999999999999999999999  99999999999998776    799999999987


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcH
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDP  903 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~  903 (935)
                      .... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.......  ..+..+++
T Consensus       169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  247 (361)
T 2yab_A          169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE  247 (361)
T ss_dssp             CCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCH
T ss_pred             cCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCH
Confidence            6543 22345679999999999999999999999999999999999999999998888877764332221  12356889


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+++||.+||..|   |.+||++.++|+|||
T Consensus       248 ~~~~li~~~L~~d---P~~R~t~~e~l~hp~  275 (361)
T 2yab_A          248 LAKDFIRKLLVKE---TRKRLTIQEALRHPW  275 (361)
T ss_dssp             HHHHHHHHHSCSS---TTTSCCHHHHHTSTT
T ss_pred             HHHHHHHHHCCCC---hhHCcCHHHHhcCcC
Confidence            9999999999999   999999999999999


No 33 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.9e-44  Score=397.59  Aligned_cols=254  Identities=22%  Similarity=0.350  Sum_probs=221.7

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCce
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l  748 (935)
                      +..++|++++.||+|+||.||+|++  +++.||||++..... .......+.+|+.++.++ +||||++++++|.+.+.+
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            4457899999999999999999987  478999999987654 345566788999999988 899999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |+||||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++....
T Consensus        86 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            9999999999999999753 46899999999999999999999999  99999999999999999999999999986543


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC---------ChHHHHHHhhccccccCCCC
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGM---------NPMQVVGAVGFQNRRLEIPK  899 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~---------~~~eil~~I~~~~~r~~ip~  899 (935)
                      ........+||+.|+|||++.+..++.++|||||||++|||++|+.||...         ....+...+  ......+|.
T Consensus       163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~  240 (345)
T 3a8x_A          163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIPR  240 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH--HHCCCCCCT
T ss_pred             CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH--HcCCCCCCC
Confidence            333445678999999999999999999999999999999999999999752         222333333  234566788


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCCCcCH------HHHHhCcC
Q 002331          900 ELDPLVARIIWECWQTGWSSLHIRTSQ------AQLSHKRF  934 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~kRPSa------~EILqHPF  934 (935)
                      .++..+++||.+||+.|   |.+||++      .+|++|||
T Consensus       241 ~~s~~~~~li~~lL~~d---P~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          241 SLSVKAASVLKSFLNKD---PKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             TSCHHHHHHHHHHTCSS---TTTSTTCCTTTHHHHHHTSGG
T ss_pred             CCCHHHHHHHHHHhcCC---HhHCCCCCCcCCHHHHhcCCc
Confidence            99999999999999999   9999984      89999998


No 34 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=4.1e-45  Score=403.97  Aligned_cols=255  Identities=24%  Similarity=0.399  Sum_probs=224.0

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~  747 (935)
                      .+..++|++.+.||+|+||.||+|++  +++.||||++..... .......+..|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            45678999999999999999999987  578999999876421 112344577899999877 99999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|+||||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++...
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  169 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENM  169 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence            99999999999999999753 46899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      .........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++...+..  ....+|..+++++++
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~  247 (345)
T 1xjd_A          170 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPFYPRWLEKEAKD  247 (345)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             cCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--CCCCCCcccCHHHHH
Confidence            333344567899999999999999999999999999999999999999999998888877743  345678889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHH-HHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQA-QLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~-EILqHPF  934 (935)
                      ||.+||+.|   |.+||++. +|++|||
T Consensus       248 li~~lL~~d---p~~R~~~~~~i~~hp~  272 (345)
T 1xjd_A          248 LLVKLFVRE---PEKRLGVRGDIRQHPL  272 (345)
T ss_dssp             HHHHHSCSS---GGGSBTTBSCGGGSGG
T ss_pred             HHHHHhcCC---HhHcCCChHHHHcCcc
Confidence            999999999   99999998 9999998


No 35 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.3e-44  Score=411.44  Aligned_cols=253  Identities=25%  Similarity=0.354  Sum_probs=225.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++++.||+|+||.||+|.+  .++.||+|++............+.+|+.+|+.++|||||++++++.+.+..|+|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            6799999999999999999976  68899999998877666667789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec---CCCcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD---KNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd---~~g~VKL~DFGlA~~~~~~~  830 (935)
                      |+++|+|.+++... ..+++..+..++.||+.||.|||++|  |+||||||+||||+   .++.+||+|||++.......
T Consensus        91 ~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           91 LVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             eCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            99999999988764 46999999999999999999999999  99999999999998   46889999999998776544


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dL  908 (935)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..++...+.........+  ..+++.+++|
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  247 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL  247 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHH
Confidence            44456789999999999999999999999999999999999999999999888887775444333322  4689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       248 i~~~L~~d---P~~Rpta~e~L~hp~  270 (444)
T 3soa_A          248 INKMLTIN---PSKRITAAEALKHPW  270 (444)
T ss_dssp             HHHHSCSS---TTTSCCHHHHHHSCT
T ss_pred             HHHHcCCC---hhHCCCHHHHhcCcc
Confidence            99999999   999999999999999


No 36 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-44  Score=394.72  Aligned_cols=251  Identities=24%  Similarity=0.421  Sum_probs=223.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +..++|++.+.||+|+||.||+|+.  +++.||||++....... .....+.+|+.+++.++||||+++++++.+...+|
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence            3457899999999999999999987  58899999987543211 23456788999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++.....
T Consensus        83 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             EEECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            999999999999999763 46899999999999999999999999  999999999999999999999999999876543


Q ss_pred             cccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          830 FLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       830 ~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                         ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+..  ....+|..+++++.+||
T Consensus       160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~li  234 (318)
T 1fot_A          160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN--AELRFPPFFNEDVKDLL  234 (318)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--CCCCCCTTSCHHHHHHH
T ss_pred             ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCCCCHHHHHHH
Confidence               2356899999999999999999999999999999999999999999988887777643  34567888999999999


Q ss_pred             HHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      .+||+.|   |.+||     ++++|++|||
T Consensus       235 ~~lL~~d---p~~R~~~~~~~~~~i~~hp~  261 (318)
T 1fot_A          235 SRLITRD---LSQRLGNLQNGTEDVKNHPW  261 (318)
T ss_dssp             HHHTCSC---TTTCTTSSTTTTHHHHTSGG
T ss_pred             HHHhccC---HHHcCCCcCCCHHHHhcCcc
Confidence            9999999   99999     9999999998


No 37 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=7.2e-45  Score=403.20  Aligned_cols=256  Identities=20%  Similarity=0.338  Sum_probs=223.9

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCC-CHHHHHHHHHHHHHHHHc-CCCceeeeecccccCC
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDF-SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPP  746 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~  746 (935)
                      ..+..++|++++.||+|+||.||+|++.  ++.||||++..... .......+..|..+|..+ +||||++++++|.+.+
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            4466789999999999999999999884  57899999876432 112345677899999888 8999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+||||||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++..
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            999999999999999999753 46899999999999999999999999  999999999999999999999999999865


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHH
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVA  906 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~  906 (935)
                      ..........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..++...+..  ....+|..+++++.
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~  249 (353)
T 2i0e_A          172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNVAYPKSMSKEAV  249 (353)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHH
T ss_pred             ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh--CCCCCCCCCCHHHH
Confidence            4333445567899999999999999999999999999999999999999999998888877743  45667889999999


Q ss_pred             HHHHHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          907 RIIWECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      +||.+||+.|   |.+||     ++++|++|||
T Consensus       250 ~li~~lL~~d---P~~R~~~~~~~~~~i~~h~~  279 (353)
T 2i0e_A          250 AICKGLMTKH---PGKRLGCGPEGERDIKEHAF  279 (353)
T ss_dssp             HHHHHHTCSC---TTSCTTCSTTHHHHHHTSGG
T ss_pred             HHHHHHhhcC---HHHcCCCCCCCHHHHhcCcc
Confidence            9999999999   99999     5799999998


No 38 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-44  Score=393.75  Aligned_cols=251  Identities=18%  Similarity=0.300  Sum_probs=221.4

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++++.||+|+||.||+|.+  +++.||+|++....   .....+.+|+.+|+.++||||+++++++.+.+.+++||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence            47899999999999999999987  57889999986442   34556889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC--CCcEEEEeccccccccCCc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK--NWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~--~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+|||++.  ++.+||+|||+++......
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            999999999999876667999999999999999999999999  999999999999987  7899999999998765432


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC--CCCcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE--IPKELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~--ip~~ls~~L~dL  908 (935)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+........  ....+++++.+|
T Consensus       159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  237 (321)
T 1tki_A          159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF  237 (321)
T ss_dssp             -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHH
T ss_pred             -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHH
Confidence             22345789999999999998899999999999999999999999999988888777653332221  124689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||..|   |.+||++.++|+|||
T Consensus       238 i~~~L~~d---p~~Rpt~~e~l~hp~  260 (321)
T 1tki_A          238 VDRLLVKE---RKSRMTASEALQHPW  260 (321)
T ss_dssp             HHTTSCSS---GGGSCCHHHHHHSHH
T ss_pred             HHHHcCCC---hhHCcCHHHHhcChh
Confidence            99999999   999999999999998


No 39 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=9.7e-44  Score=374.60  Aligned_cols=253  Identities=23%  Similarity=0.357  Sum_probs=224.4

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++.+.||+|+||.||+|.+  +++.||||++............+.+|+.++++++||||+++++++...+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            47899999999999999999987  5789999999887777777788999999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc---EEEEeccccccccCC
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN---VKVSDFGLSRLKHNT  829 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~---VKL~DFGlA~~~~~~  829 (935)
                      ||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.   +||+|||++......
T Consensus        85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            999999999888653 46899999999999999999999999  999999999999986655   999999999876543


Q ss_pred             cccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC--CCCcCcHHHHH
Q 002331          830 FLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE--IPKELDPLVAR  907 (935)
Q Consensus       830 ~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~--ip~~ls~~L~d  907 (935)
                      . ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+........  ....+++.+.+
T Consensus       162 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T 3kk8_A          162 E-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS  240 (284)
T ss_dssp             C-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred             c-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence            2 23446799999999999999999999999999999999999999999988887776654333332  22578999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||++.++|+|||
T Consensus       241 li~~~l~~d---p~~Rps~~~~l~h~~  264 (284)
T 3kk8_A          241 LIDSMLTVN---PKKRITADQALKVPW  264 (284)
T ss_dssp             HHHHHSCSS---TTTSCCHHHHTTSHH
T ss_pred             HHHHHcccC---hhhCCCHHHHhcCcc
Confidence            999999999   999999999999998


No 40 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.9e-44  Score=405.41  Aligned_cols=255  Identities=21%  Similarity=0.348  Sum_probs=220.1

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHc-CCCceeeeecccccCCc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~  747 (935)
                      .+..++|+++++||+|+||.||+|++  +++.||||++.+..... .....+.+|..+|.++ +|||||+++++|.+.+.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            45668999999999999999999987  57789999998764432 3345678899999887 89999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +||||||+++|+|..++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++...
T Consensus       128 ~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~  204 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  204 (396)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence            99999999999999999763 46999999999999999999999999  9999999999999999999999999998644


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---------hHHHHHHhhccccccCCC
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMN---------PMQVVGAVGFQNRRLEIP  898 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~---------~~eil~~I~~~~~r~~ip  898 (935)
                      .........+||+.|+|||++.+..++.++|||||||++|||++|+.||....         ...+...+  ......+|
T Consensus       205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p  282 (396)
T 4dc2_A          205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIP  282 (396)
T ss_dssp             CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--HHCCCCCC
T ss_pred             cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--hccccCCC
Confidence            44344566789999999999999999999999999999999999999997432         12233333  34566788


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcC------HHHHHhCcC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTS------QAQLSHKRF  934 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPS------a~EILqHPF  934 (935)
                      ..+++++++||.+||+.|   |.+||+      +++|++|||
T Consensus       283 ~~~s~~~~~li~~lL~~d---P~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          283 RSLSVKAASVLKSFLNKD---PKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             TTSCHHHHHHHHHHTCSC---TTTSTTCSTTTHHHHHHHSTT
T ss_pred             CcCCHHHHHHHHHHhcCC---HhHcCCCCCCCCHHHHhcCcc
Confidence            899999999999999999   999998      489999999


No 41 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=5.3e-44  Score=372.05  Aligned_cols=254  Identities=29%  Similarity=0.558  Sum_probs=228.1

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC--Cce
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP--PNL  748 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~--~~l  748 (935)
                      .++..++|++.+.||+|+||.||+|+++++.||||++............+.+|+.++++++||||+++++++.+.  ..+
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            456778999999999999999999999999999999988777777778899999999999999999999999877  778


Q ss_pred             EEEEeeCCCCCHHHHHcCCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 SIITEFLPRGSLFRILHRPHC-QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~-~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ++||||+++++|.+++.+... .+++..++.|+.||+.||.|||+++.+|+||||||+|||++.++.+||+|||++....
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~  164 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ  164 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence            999999999999999987543 5899999999999999999999987779999999999999999999999999876532


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCc---hhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNE---KCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~---ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      .     ....||+.|+|||++.+..++.   ++|||||||++|+|++|+.||.+.+.......+.....++.++..+++.
T Consensus       165 ~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (271)
T 3kmu_A          165 S-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH  239 (271)
T ss_dssp             C-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHH
T ss_pred             c-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHH
Confidence            2     3356899999999998765544   8999999999999999999999999888877776677778888999999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+||.+||+.|   |.+||++.+|++.
T Consensus       240 ~~~li~~~l~~~---p~~Rps~~~il~~  264 (271)
T 3kmu_A          240 VSKLMKICMNED---PAKRPKFDMIVPI  264 (271)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            999999999999   9999999999863


No 42 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=7e-44  Score=388.02  Aligned_cols=252  Identities=24%  Similarity=0.375  Sum_probs=219.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++|.+.+.||+|+||.||+|++  +++.||||++.......    .....+.+|+.+|+.++||||+++++++.+...++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            5699999999999999999987  58899999987654321    13567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC----cEEEEecccccc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW----NVKVSDFGLSRL  825 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g----~VKL~DFGlA~~  825 (935)
                      +||||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++    .+||+|||+++.
T Consensus        91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            999999999999999763 57999999999999999999999999  99999999999998877    899999999987


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcH
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDP  903 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~  903 (935)
                      ..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+.......  ..+..+++
T Consensus       168 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (326)
T 2y0a_A          168 IDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA  246 (326)
T ss_dssp             CCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             CCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCH
Confidence            65332 2344679999999999999999999999999999999999999999988877776654322221  12256889


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||++.++|+|||
T Consensus       247 ~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  274 (326)
T 2y0a_A          247 LAKDFIRRLLVKD---PKKRMTIQDSLQHPW  274 (326)
T ss_dssp             HHHHHHHHHSCSS---GGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHHccCC---hhhCCCHHHHhcCCC
Confidence            9999999999999   999999999999999


No 43 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=8.9e-44  Score=394.78  Aligned_cols=259  Identities=21%  Similarity=0.273  Sum_probs=217.8

Q ss_pred             cCCCCCCeeEEEEeeec--CcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          671 CEIPWEDLVLGERIGLG--SYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G--~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      +....++|++++.||+|  +||.||+|++  +++.||||++............+.+|+.+++.++|||||+++++|.+.+
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   99 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN   99 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC
Confidence            33455789999999999  9999999987  5889999999887777777788999999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .+|+||||+++++|.+++... ...+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||++..
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEccccccee
Confidence            999999999999999998653 356899999999999999999999999  99999999999999999999999998865


Q ss_pred             ccCCc-------ccCCCCCCCCCccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---
Q 002331          826 KHNTF-------LSSKSTAGTPEWMAPEVLRN--EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR---  893 (935)
Q Consensus       826 ~~~~~-------~~~~s~~GT~~Y~APEvl~g--~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~---  893 (935)
                      .....       .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..+....+.....   
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  257 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  257 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence            42211       11233478999999999987  5789999999999999999999999988665544433211100   


Q ss_pred             -----------------------------------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          894 -----------------------------------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       894 -----------------------------------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                                                               ...++..+++.+.+||.+||+.|   |.+||++.++|+|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d---P~~Rpta~ell~h  334 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN---PDARPSASTLLNH  334 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSC---TTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC---cccCCCHHHHhcC
Confidence                                                     11234567899999999999999   9999999999999


Q ss_pred             cC
Q 002331          933 RF  934 (935)
Q Consensus       933 PF  934 (935)
                      ||
T Consensus       335 p~  336 (389)
T 3gni_B          335 SF  336 (389)
T ss_dssp             GG
T ss_pred             HH
Confidence            98


No 44 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.4e-44  Score=412.95  Aligned_cols=260  Identities=20%  Similarity=0.344  Sum_probs=225.4

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ...+..++|+++++||+|+||+||+|++  .++.||||++....... .....+.+|+.++..++||||++++++|.+.+
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN  147 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence            4567778999999999999999999987  46889999987532111 11223788999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+|||||||++|+|.+++.+....+++..++.++.||+.||.|||+++  ||||||||+||||+.++++||+|||+++..
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence            999999999999999999876678999999999999999999999999  999999999999999999999999999765


Q ss_pred             cCCc-ccCCCCCCCCCccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC-
Q 002331          827 HNTF-LSSKSTAGTPEWMAPEVLR-----NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPK-  899 (935)
Q Consensus       827 ~~~~-~~~~s~~GT~~Y~APEvl~-----g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~-  899 (935)
                      .... ......+||+.|+|||++.     +..++.++|||||||++|||++|+.||.+.+..+....+........+|. 
T Consensus       226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  305 (437)
T 4aw2_A          226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQ  305 (437)
T ss_dssp             CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSS
T ss_pred             ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcc
Confidence            4432 2234568999999999997     45689999999999999999999999999999888887754444445554 


Q ss_pred             --cCcHHHHHHHHHHHhhCCCCcCC--CcCHHHHHhCcC
Q 002331          900 --ELDPLVARIIWECWQTGWSSLHI--RTSQAQLSHKRF  934 (935)
Q Consensus       900 --~ls~~L~dLI~qCL~~D~ssP~k--RPSa~EILqHPF  934 (935)
                        .+++++++||++||+.+   |.+  |+++++|++|||
T Consensus       306 ~~~~s~~~~dLi~~lL~~~---~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          306 VTDVSENAKDLIRRLICSR---EHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             CCCSCHHHHHHHHTTSSCG---GGCTTTTTTHHHHTSGG
T ss_pred             cccCCHHHHHHHHHHhccc---ccccCCCCHHHHhCCCc
Confidence              48999999999999888   888  999999999998


No 45 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.4e-44  Score=378.79  Aligned_cols=253  Identities=25%  Similarity=0.395  Sum_probs=197.9

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++....... .....+.+|+.++++++||||+++++++.+.+.+++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            36899999999999999999986  68899999986543211 1245688999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.+||+|||++........
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence            9999999999999876678999999999999999999999999  99999999999999999999999999987654333


Q ss_pred             cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWE  911 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~q  911 (935)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+.  .....+|..++..+.+||.+
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~  245 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSFLSIEAKDLIHQ  245 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC--SSCCCCCTTSCHHHHHHHHH
T ss_pred             cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh--hcccCCccccCHHHHHHHHH
Confidence            3345678999999999999889999999999999999999999999876665554442  23345677899999999999


Q ss_pred             HHhhCCCCcCCCcCHHHHHhCcC
Q 002331          912 CWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       912 CL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||+.|   |.+||++.++++|||
T Consensus       246 ~l~~d---p~~Rps~~~~l~h~~  265 (278)
T 3cok_A          246 LLRRN---PADRLSLSSVLDHPF  265 (278)
T ss_dssp             HSCSS---GGGSCCHHHHTTSTT
T ss_pred             HcccC---HhhCCCHHHHhcCcc
Confidence            99999   999999999999999


No 46 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.9e-44  Score=397.25  Aligned_cols=251  Identities=22%  Similarity=0.385  Sum_probs=224.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ...++|++++.||+|+||.||+|++  +++.||||++...... ......+.+|+.+|+.++||||+++++++.+...+|
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            4457899999999999999999987  5889999998754321 123456789999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      |||||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++.....
T Consensus       118 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EEEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCC
Confidence            999999999999999763 46899999999999999999999999  999999999999999999999999999876543


Q ss_pred             cccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          830 FLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       830 ~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                         ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++...+..  ....+|..+++.+.+||
T Consensus       195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~li  269 (350)
T 1rdq_E          195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSHFSSDLKDLL  269 (350)
T ss_dssp             ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTCCHHHHHHH
T ss_pred             ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHH
Confidence               2346799999999999999999999999999999999999999999998888877743  35667888999999999


Q ss_pred             HHHHhhCCCCcCCCcC-----HHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTS-----QAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPS-----a~EILqHPF  934 (935)
                      .+||+.|   |.+||+     +++|++|||
T Consensus       270 ~~lL~~d---p~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          270 RNLLQVD---LTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             HHHSCSC---TTTCTTSSTTTTHHHHTSGG
T ss_pred             HHHhhcC---HHhccCCccCCHHHHHhCcC
Confidence            9999999   999998     999999998


No 47 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.3e-43  Score=372.10  Aligned_cols=254  Identities=30%  Similarity=0.508  Sum_probs=225.8

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      .+.+..++|++.+.||+|+||.||+|.+ +++.||||++.......   ..+.+|+.++++++||||+++++++.+...+
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   80 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   80 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEecCCce
Confidence            3567778999999999999999999988 67789999998665443   4688999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.+||+|||+++....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             EEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEeccccccccccc
Confidence            9999999999999999877777999999999999999999999999  99999999999999999999999999986644


Q ss_pred             Cc-ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHHH
Q 002331          829 TF-LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVA  906 (935)
Q Consensus       829 ~~-~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~  906 (935)
                      .. .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+. .......+..+++.+.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  237 (269)
T 4hcu_A          159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVY  237 (269)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHH
T ss_pred             cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-cCccCCCCCcCCHHHH
Confidence            32 22334557788999999999999999999999999999999 999999999888877764 3345667788899999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +||.+||+.|   |.+||++.++++|
T Consensus       238 ~li~~~l~~~---p~~Rps~~~ll~~  260 (269)
T 4hcu_A          238 QIMNHCWRER---PEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHccCC---cccCcCHHHHHHH
Confidence            9999999999   9999999999986


No 48 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1.5e-44  Score=409.93  Aligned_cols=254  Identities=23%  Similarity=0.407  Sum_probs=215.4

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +..++|++.+.||+|+||.||+|++  +++.||||++..... .......+.+|+.+|+.++||||++++++|...+.++
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            4457899999999999999999987  578999999876432 2334556788999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHT-STPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs-~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |||||+++++|.+++.+. ..+++..++.++.||+.||.|||+ +|  ||||||||+||||+.++.+||+|||+++....
T Consensus       225 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             EEECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred             EEEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence            999999999999999763 468999999999999999999998 88  99999999999999999999999999986544


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARI  908 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dL  908 (935)
                      ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...+...+..  ....+|..+++.+.+|
T Consensus       302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~l  379 (446)
T 4ejn_A          302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSL  379 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred             CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh--CCCCCCccCCHHHHHH
Confidence            43444567899999999999999999999999999999999999999999998888777643  3456788899999999


Q ss_pred             HHHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      |.+||+.|   |.+||     ++++|++|||
T Consensus       380 i~~~L~~d---P~~R~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          380 LSGLLKKD---PKQRLGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             HHHHTCSS---TTTSTTCSTTTHHHHHTSGG
T ss_pred             HHHHcccC---HHHhCCCCCCCHHHHHhCcc
Confidence            99999999   99999     9999999998


No 49 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1e-43  Score=379.77  Aligned_cols=254  Identities=23%  Similarity=0.336  Sum_probs=212.1

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++++.||+|+||.||+|++  +++.||||++............+.+|+.++++++||||+++++++...+.+++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            36899999999999999999987  4889999999877666666778889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS  832 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~  832 (935)
                      ||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.........
T Consensus        82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence            999999999988653 46899999999999999999999999  999999999999999999999999999876644344


Q ss_pred             CCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-------------------
Q 002331          833 SKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN-------------------  892 (935)
Q Consensus       833 ~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~-------------------  892 (935)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+....+....                   
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence            445678999999999986 567999999999999999999999999987766554332110                   


Q ss_pred             cccCC----------CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 RRLEI----------PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ~r~~i----------p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .....          ...+++.+.+||.+||+.|   |.+||++++||+|||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  287 (311)
T 4agu_A          239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD---PTERLTCEQLLHHPY  287 (311)
T ss_dssp             CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSS---TTTSCCHHHHHTSGG
T ss_pred             CcCCCccccchhhhhcccccHHHHHHHHHHccCC---hhhcCCHHHHhcChH
Confidence            00000          1357888999999999999   999999999999998


No 50 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=4.2e-44  Score=394.12  Aligned_cols=253  Identities=23%  Similarity=0.336  Sum_probs=213.9

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC---CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF---SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~---~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++.....   .......+.+|+.+++.++||||+++++++.+.+.+||
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            5799999999999999999987  588999999864321   11124578899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc---EEEEeccccc
Q 002331          751 ITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN---VKVSDFGLSR  824 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~---VKL~DFGlA~  824 (935)
                      |||||++++|.+++.+   .+..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.   +||+|||++.
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~  181 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAI  181 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCccee
Confidence            9999999999887753   2345899999999999999999999999  999999999999986554   9999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCc
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELD  902 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls  902 (935)
                      ............+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. ......+.......  .....++
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s  260 (351)
T 3c0i_A          182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS  260 (351)
T ss_dssp             ECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             EecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCC
Confidence            77655444456689999999999999999999999999999999999999998864 33444432222111  1124688


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +.+++||.+||+.|   |.+||++.++|+|||
T Consensus       261 ~~~~~li~~~L~~d---P~~R~s~~e~l~hp~  289 (351)
T 3c0i_A          261 ESAKDLVRRMLMLD---PAERITVYEALNHPW  289 (351)
T ss_dssp             HHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             HHHHHHHHHHCCCC---hhHCcCHHHHhcChh
Confidence            99999999999999   999999999999998


No 51 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.4e-44  Score=409.56  Aligned_cols=258  Identities=23%  Similarity=0.377  Sum_probs=223.8

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ..++..++|++++.||+|+||+||+|++  +++.||||++...... ......+.+|+.+++.++|||||+++++|.+..
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            4567778999999999999999999987  5788999998653211 111234778999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+||||||+++|+|.+++.+  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++..
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            99999999999999999975  35899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCc-ccCCCCCCCCCccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--C
Q 002331          827 HNTF-LSSKSTAGTPEWMAPEVLRNEP----SNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--K  899 (935)
Q Consensus       827 ~~~~-~~~~s~~GT~~Y~APEvl~g~~----~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~  899 (935)
                      .... ......+||+.|+|||++.+..    ++.++|||||||++|||++|+.||.+.+.......+........+|  .
T Consensus       219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  298 (410)
T 3v8s_A          219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN  298 (410)
T ss_dssp             CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTC
T ss_pred             ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcc
Confidence            5432 2334678999999999998765    7889999999999999999999999999988888776444344444  4


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCC--CcCHHHHHhCcC
Q 002331          900 ELDPLVARIIWECWQTGWSSLHI--RTSQAQLSHKRF  934 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~k--RPSa~EILqHPF  934 (935)
                      .+++++++||.+||+.+   |.+  ||++++|++|||
T Consensus       299 ~~s~~~~~li~~lL~~~---~~rlgR~~~~ei~~Hp~  332 (410)
T 3v8s_A          299 DISKEAKNLICAFLTDR---EVRLGRNGVEEIKRHLF  332 (410)
T ss_dssp             CCCHHHHHHHHHHSSCG---GGCTTSSCHHHHHTSGG
T ss_pred             cccHHHHHHHHHHccCh---hhhCCCCCHHHHhcCcc
Confidence            68999999999999988   888  999999999998


No 52 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=4.1e-44  Score=387.37  Aligned_cols=253  Identities=25%  Similarity=0.306  Sum_probs=200.8

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++++.||+|+||.||+|.+  +++.||||++..... ......+.+|+.++++++||||+++++++..++.+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            36799999999999999999976  588999999875532 222346778999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          753 EFLPRGSLFRILHRP-----HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~-----~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ||++ ++|.+++...     ...+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            9998 5999988532     245899999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR-------------  893 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~-------------  893 (935)
                      ..........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+.....             
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence            443334456789999999999874 689999999999999999999999999887766654421100             


Q ss_pred             -------------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 -------------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 -------------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                         ....+..++..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d---P~~Rpt~~e~l~hp~  296 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN---PDMRLSAKQALHHPW  296 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSS---GGGSCCHHHHTTSGG
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCC---cccCCCHHHHhCChh
Confidence                               01122357889999999999999   999999999999998


No 53 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=4.4e-44  Score=399.95  Aligned_cols=254  Identities=24%  Similarity=0.357  Sum_probs=216.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHH-HHHcCCCceeeeecccccCCce
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKI-MRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~i-L~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      +..++|++++.||+|+||.||+|++  +++.||||++...... ......+.+|..+ ++.++||||++++++|.+.+.+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            3457899999999999999999987  5778999999876543 2334456677776 4678999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ||||||+++|+|.+++.+. ..+++..++.++.||+.||+|||++|  |+||||||+||||+.+|++||+|||+++....
T Consensus       115 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            9999999999999999763 46889999999999999999999999  99999999999999999999999999986544


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARI  908 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dL  908 (935)
                      ........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++...+..  ....++..+++.+++|
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~l  269 (373)
T 2r5t_A          192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--KPLQLKPNITNSARHL  269 (373)
T ss_dssp             CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH--SCCCCCSSSCHHHHHH
T ss_pred             CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--cccCCCCCCCHHHHHH
Confidence            43445567899999999999999999999999999999999999999999998888877743  3556778899999999


Q ss_pred             HHHHHhhCCCCcCCCcCH----HHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQ----AQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa----~EILqHPF  934 (935)
                      |.+||+.|   |.+||++    .+|++|||
T Consensus       270 i~~lL~~d---p~~R~~~~~~~~~i~~h~~  296 (373)
T 2r5t_A          270 LEGLLQKD---RTKRLGAKDDFMEIKSHVF  296 (373)
T ss_dssp             HHHHTCSS---GGGSTTTTTTHHHHHTSGG
T ss_pred             HHHHcccC---HHhCCCCCCCHHHHhCCcc
Confidence            99999999   9999986    79999998


No 54 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.2e-43  Score=391.96  Aligned_cols=255  Identities=29%  Similarity=0.507  Sum_probs=222.5

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeec
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMG  740 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g  740 (935)
                      +++..++|++++.||+|+||.||+|++.         +..||||++... ........+.+|+.+|+.+ +||||+++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            4566789999999999999999999752         346999998755 3455677899999999999 8999999999


Q ss_pred             ccccCCceEEEEeeCCCCCHHHHHcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCC
Q 002331          741 AVTRPPNLSIITEFLPRGSLFRILHRPH---------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSP  805 (935)
Q Consensus       741 ~~~~~~~l~LVmEy~~gGsL~dlL~~~~---------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPe  805 (935)
                      ++.+.+.+|+||||+++|+|.+++....               ..+++..++.++.||+.||.|||++|  |+||||||+
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~  232 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAAR  232 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGG
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchh
Confidence            9999999999999999999999997532               34789999999999999999999999  999999999


Q ss_pred             CeeecCCCcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 002331          806 NLLVDKNWNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPM  882 (935)
Q Consensus       806 NILLd~~g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~  882 (935)
                      ||||+.++.+||+|||+++.......  ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus       233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            99999999999999999986654322  2233457789999999999999999999999999999999 99999998887


Q ss_pred             HHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          883 QVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       883 eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ++...+. ...+..++..+++++.+||.+||+.|   |.+||++.+|+++
T Consensus       313 ~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rpt~~ell~~  358 (370)
T 2psq_A          313 ELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVED  358 (370)
T ss_dssp             GHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            7776554 44566788899999999999999999   9999999999874


No 55 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.9e-43  Score=369.94  Aligned_cols=254  Identities=37%  Similarity=0.645  Sum_probs=214.6

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCC--HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFS--GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~--~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++..++|++.+.||+|+||.||+|.+.++.||||++......  ......+.+|+.+++.++||||+++++++.+.+.++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            567789999999999999999999999999999998754322  233567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CEEeeCCCCCCeeecC--------CCcEEEEec
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTP-TIVHRDLKSPNLLVDK--------NWNVKVSDF  820 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~-~IIHrDLKPeNILLd~--------~g~VKL~DF  820 (935)
                      +||||+++++|.+++..  ..+++..++.++.||+.||.|||+++. +|+||||||+||||+.        ++.+||+||
T Consensus        83 lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999999965  468999999999999999999999874 4889999999999986        788999999


Q ss_pred             cccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCc
Q 002331          821 GLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKE  900 (935)
Q Consensus       821 GlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~  900 (935)
                      |++.......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+........++..
T Consensus       161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  238 (271)
T 3dtc_A          161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST  238 (271)
T ss_dssp             CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTT
T ss_pred             Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcc
Confidence            9998655432  22457899999999999999999999999999999999999999999888887777666677788899


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +++.+.+||.+||+.|   |.+||++.+++++
T Consensus       239 ~~~~~~~li~~~l~~~---p~~Rps~~e~l~~  267 (271)
T 3dtc_A          239 CPEPFAKLMEDCWNPD---PHSRPSFTNILDQ  267 (271)
T ss_dssp             CCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhcCC---cccCcCHHHHHHH
Confidence            9999999999999999   9999999999975


No 56 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.1e-43  Score=386.62  Aligned_cols=253  Identities=27%  Similarity=0.342  Sum_probs=213.0

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++++.||+|+||.||+|.+  +++.||||++...... .....+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            47899999999999999999987  5889999998755432 23456889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC--c
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT--F  830 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~--~  830 (935)
                      ||+++++|.+++... ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++.....  .
T Consensus        85 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            999999999999764 46999999999999999999999999  999999999999999999999999999865422  1


Q ss_pred             ccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPM-QVVGAVGFQNRRLEIPKELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~-eil~~I~~~~~r~~ip~~ls~~L~dL  908 (935)
                      .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ..................+++.+.+|
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence            22345689999999999988775 77999999999999999999999876553 22222222222333346789999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.||++|||
T Consensus       242 i~~~L~~d---P~~R~t~~eil~h~~  264 (323)
T 3tki_A          242 LHKILVEN---PSARITIPDIKKDRW  264 (323)
T ss_dssp             HHHHSCSS---TTTSCCHHHHTTCTT
T ss_pred             HHHHccCC---hhhCcCHHHHhhChh
Confidence            99999999   999999999999999


No 57 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=8.3e-44  Score=374.70  Aligned_cols=251  Identities=26%  Similarity=0.415  Sum_probs=199.4

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|++.+.||+|+||.||+|.+  +++.||||++....... .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus        11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (275)
T 2eue_A           11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred             cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence            347899999999999999999976  68899999987654432 335678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+ +++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.......
T Consensus        91 v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  166 (275)
T 2eue_A           91 VIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred             Eehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence            99999 66888887664 46999999999999999999999999  9999999999999999999999999998665432


Q ss_pred             ccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                       ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.........+.  .....++..+++.+.+||
T Consensus       167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li  243 (275)
T 2eue_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGLI  243 (275)
T ss_dssp             ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHH
T ss_pred             -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHHHH
Confidence             2234579999999999988775 789999999999999999999999988877776663  345567888999999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||+.|   |.+||++.|+|+|||
T Consensus       244 ~~~l~~d---P~~Rps~~e~l~h~~  265 (275)
T 2eue_A          244 KRMLIVN---PLNRISIHEIMQDDW  265 (275)
T ss_dssp             HHHSCSS---GGGSCCHHHHTTCHH
T ss_pred             HHHhhcC---HhHCCCHHHHhhCCe
Confidence            9999999   999999999999998


No 58 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-44  Score=407.83  Aligned_cols=259  Identities=19%  Similarity=0.316  Sum_probs=223.1

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      +.++..++|++.+.||+|+||.||+|++  +++.||||++.+.... ......+.+|+.++..++||||++++++|.+.+
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN  134 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence            4567778999999999999999999987  5889999998754321 112334788999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+||||||+++|+|.+++.+.+..+++..++.++.||+.||+|||+++  ||||||||+||||+.+|++||+|||+++..
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheec
Confidence            999999999999999999765557999999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc-cCCCCCCCCCccCccccc-------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC
Q 002331          827 HNTFL-SSKSTAGTPEWMAPEVLR-------NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP  898 (935)
Q Consensus       827 ~~~~~-~~~s~~GT~~Y~APEvl~-------g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip  898 (935)
                      ..... .....+||+.|+|||++.       +..++.++|||||||++|||++|+.||.+.+..+....+........+|
T Consensus       213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p  292 (412)
T 2vd5_A          213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP  292 (412)
T ss_dssp             CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC
T ss_pred             cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCC
Confidence            54322 234568999999999997       3568999999999999999999999999999888877765433333333


Q ss_pred             ---CcCcHHHHHHHHHHHhhCCCCcCCC---cCHHHHHhCcC
Q 002331          899 ---KELDPLVARIIWECWQTGWSSLHIR---TSQAQLSHKRF  934 (935)
Q Consensus       899 ---~~ls~~L~dLI~qCL~~D~ssP~kR---PSa~EILqHPF  934 (935)
                         ..+++++++||.+||+ +   |.+|   |++++|++|||
T Consensus       293 ~~~~~~s~~~~dli~~lL~-~---p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          293 LVDEGVPEEARDFIQRLLC-P---PETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             ----CCCHHHHHHHHTTSS-C---GGGCTTTTTHHHHHTSGG
T ss_pred             ccccCCCHHHHHHHHHHcC-C---hhhcCCCCCHHHHhcCCC
Confidence               6799999999999998 9   9998   59999999998


No 59 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=7.9e-44  Score=375.63  Aligned_cols=253  Identities=24%  Similarity=0.437  Sum_probs=219.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      ++..++|++++.||+|+||.||+|.+  .+..||||++....... .....+.+|+.++++++||||+++++++.+....
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   84 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   84 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence            45668999999999999999999987  46689999986543221 1245688999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++.+. ..+++..++.++.||+.||.|||+.|  |+||||||+||||+.++.+||+|||++.....
T Consensus        85 ~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            9999999999999998653 46899999999999999999999998  99999999999999999999999999865443


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARI  908 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dL  908 (935)
                      .  ......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.  .....+|..+++.+.+|
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPDFVTEGARDL  237 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHH
T ss_pred             c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH--hCCCCCCCcCCHHHHHH
Confidence            2  2234578999999999999999999999999999999999999999998887776663  34556778899999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.+||+|||
T Consensus       238 i~~~l~~~---p~~Rps~~e~l~h~~  260 (279)
T 3fdn_A          238 ISRLLKHN---PSQRPMLREVLEHPW  260 (279)
T ss_dssp             HHHHCCSS---GGGSCCHHHHHHCHH
T ss_pred             HHHHhccC---hhhCCCHHHHhhCcc
Confidence            99999999   999999999999998


No 60 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=4e-43  Score=381.29  Aligned_cols=249  Identities=27%  Similarity=0.386  Sum_probs=219.3

Q ss_pred             CeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEee
Q 002331          677 DLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEF  754 (935)
Q Consensus       677 dy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmEy  754 (935)
                      .|...+.||+|+||.||+|++  +|+.||||++......  ....+.+|+.+++.++||||+++++++...+.+++||||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence            478888999999999999987  5889999998765432  245678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCC
Q 002331          755 LPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSK  834 (935)
Q Consensus       755 ~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~  834 (935)
                      +++++|.+++.+  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++...........
T Consensus       124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  199 (321)
T 2c30_A          124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK  199 (321)
T ss_dssp             CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence            999999999975  36899999999999999999999998  99999999999999999999999999987655433445


Q ss_pred             CCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCcCcHHHHHHHHHHH
Q 002331          835 STAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR-RLEIPKELDPLVARIIWECW  913 (935)
Q Consensus       835 s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~-r~~ip~~ls~~L~dLI~qCL  913 (935)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+..... ....+..+++.+.+||.+||
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  279 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML  279 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHS
T ss_pred             cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHc
Confidence            66899999999999999999999999999999999999999999888777766543222 12233568899999999999


Q ss_pred             hhCCCCcCCCcCHHHHHhCcC
Q 002331          914 QTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       914 ~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +.|   |.+||++.++++|||
T Consensus       280 ~~d---p~~Rps~~ell~hp~  297 (321)
T 2c30_A          280 VRD---PQERATAQELLDHPF  297 (321)
T ss_dssp             CSS---TTTSCCHHHHHTSGG
T ss_pred             cCC---hhhCcCHHHHhcChh
Confidence            999   999999999999998


No 61 
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.5e-43  Score=373.63  Aligned_cols=257  Identities=25%  Similarity=0.359  Sum_probs=202.9

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      +++..++|++.+.||+|+||.||+|++  +++.||||++............+..+..+++.++||||+++++++.+.+..
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            356778999999999999999999987  788999999876654444444455566667788999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          749 SIITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ++||||+++ +|.+++..   ....+++..++.|+.||+.||.|||++ |  |+||||||+||||+.++.+||+|||+++
T Consensus        82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T 3fme_A           82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISG  158 (290)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred             EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCcc
Confidence            999999975 88777643   356799999999999999999999998 8  9999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhccccccCCCC
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVL----RNEPSNEKCDVYSFGVILWELATLKLPWIGM-NPMQVVGAVGFQNRRLEIPK  899 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl----~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~-~~~eil~~I~~~~~r~~ip~  899 (935)
                      ...... ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||... ..................+.
T Consensus       159 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  237 (290)
T 3fme_A          159 YLVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD  237 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTT
T ss_pred             cccccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccc
Confidence            765432 23345799999999996    5567899999999999999999999999863 44444443333333333445


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          900 ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       238 ~~~~~~~~li~~~l~~~---p~~Rpt~~e~l~hp~  269 (290)
T 3fme_A          238 KFSAEFVDFTSQCLKKN---SKERPTYPELMQHPF  269 (290)
T ss_dssp             TSCHHHHHHHHHHTCSS---GGGSCCHHHHTTSHH
T ss_pred             cCCHHHHHHHHHHhhcC---hhhCcCHHHHHhCcc
Confidence            78999999999999999   999999999999998


No 62 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.2e-43  Score=372.78  Aligned_cols=253  Identities=26%  Similarity=0.364  Sum_probs=225.6

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|.+++.||+|+||.||++.+  .++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            447899999999999999999987  477899999876543 44566778999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++.......
T Consensus        93 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           93 VLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence            99999999999998653 46899999999999999999999999  9999999999999999999999999998765443


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+....+.  .....++..+++.+.+||.
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~  247 (294)
T 2rku_A          170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLIQ  247 (294)
T ss_dssp             CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHHHHH
T ss_pred             cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--hccCCCccccCHHHHHHHH
Confidence            34445679999999999999889999999999999999999999999988877666553  3445678889999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||+++++++|||
T Consensus       248 ~~l~~~---p~~Rps~~~ll~~~~  268 (294)
T 2rku_A          248 KMLQTD---PTARPTINELLNDEF  268 (294)
T ss_dssp             HHTCSS---GGGSCCGGGGGGSHH
T ss_pred             HHcccC---hhhCcCHHHHhhChh
Confidence            999999   999999999999997


No 63 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.1e-43  Score=392.26  Aligned_cols=252  Identities=23%  Similarity=0.303  Sum_probs=204.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeecccccCC--ceE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTRPP--NLS  749 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~~~--~l~  749 (935)
                      .++|++++.||+|+||.||+|.+  +++.||||++............+.+|+.+|+.+. ||||+++++++...+  .+|
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            36899999999999999999976  5889999998766555666777889999999996 999999999997544  689


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +|||||+ ++|..++..  ..+++..+..++.||+.||.|||+.|  |+||||||+||||+.++.+||+|||+++.....
T Consensus        88 lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  162 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNI  162 (388)
T ss_dssp             EEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred             EEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence            9999997 589999876  36899999999999999999999999  999999999999999999999999999865321


Q ss_pred             ---------------------cccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 002331          830 ---------------------FLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGA  887 (935)
Q Consensus       830 ---------------------~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~  887 (935)
                                           .......+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+....+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  242 (388)
T 3oz6_A          163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER  242 (388)
T ss_dssp             CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                                 111234579999999999987 6789999999999999999999999999887766655


Q ss_pred             hhcccccc---------------------------------------------CCCCcCcHHHHHHHHHHHhhCCCCcCC
Q 002331          888 VGFQNRRL---------------------------------------------EIPKELDPLVARIIWECWQTGWSSLHI  922 (935)
Q Consensus       888 I~~~~~r~---------------------------------------------~ip~~ls~~L~dLI~qCL~~D~ssP~k  922 (935)
                      +......+                                             ..+..+++++.+||.+||+.|   |.+
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d---P~~  319 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN---PNK  319 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS---GGG
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC---ccc
Confidence            43111100                                             011267889999999999999   999


Q ss_pred             CcCHHHHHhCcC
Q 002331          923 RTSQAQLSHKRF  934 (935)
Q Consensus       923 RPSa~EILqHPF  934 (935)
                      ||+++|+|+|||
T Consensus       320 R~t~~e~l~Hp~  331 (388)
T 3oz6_A          320 RISANDALKHPF  331 (388)
T ss_dssp             SCCHHHHTTSTT
T ss_pred             CCCHHHHhCCHH
Confidence            999999999999


No 64 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=4.7e-43  Score=371.70  Aligned_cols=256  Identities=31%  Similarity=0.458  Sum_probs=220.1

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc----C
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR----P  745 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~----~  745 (935)
                      ......|.+.+.||+|+||.||+|.+  .+..||+|++............+.+|+.+++.++||||+++++++..    .
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK  101 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence            34456799999999999999999987  56789999998877777778889999999999999999999998764    3


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEEEeccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSDFGLSR  824 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~DFGlA~  824 (935)
                      ..+++||||+++++|.+++.+. ..+++..++.|+.||+.||.|||+.+.+|+||||||+||||+ .++.+||+|||++.
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             ceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            5589999999999999999753 468999999999999999999999876799999999999998 78999999999997


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccccCCCCcCcH
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP-MQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ......+........++...++
T Consensus       181 ~~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (290)
T 1t4h_A          181 LKRASF--AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP  257 (290)
T ss_dssp             GCCTTS--BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred             cccccc--cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH
Confidence            654432  234578999999999875 488999999999999999999999988544 4444444434444556677889


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||++.+||+|||
T Consensus       258 ~l~~li~~~l~~d---p~~Rps~~ell~h~~  285 (290)
T 1t4h_A          258 EVKEIIEGCIRQN---KDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHHccCC---hhhCCCHHHHhhCcc
Confidence            9999999999999   999999999999998


No 65 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.3e-43  Score=386.61  Aligned_cols=260  Identities=29%  Similarity=0.470  Sum_probs=223.0

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeee
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLF  738 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl  738 (935)
                      ....+++..++|++++.||+|+||.||+|++       .++.||||++.... .......+.+|+.++.++ +||||+++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            4456788899999999999999999999974       34789999987543 344567789999999999 79999999


Q ss_pred             ecccccCCc-eEEEEeeCCCCCHHHHHcCCCC------------------------------------------------
Q 002331          739 MGAVTRPPN-LSIITEFLPRGSLFRILHRPHC------------------------------------------------  769 (935)
Q Consensus       739 ~g~~~~~~~-l~LVmEy~~gGsL~dlL~~~~~------------------------------------------------  769 (935)
                      ++++...+. +++||||+++|+|.+++.....                                                
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            999877554 8999999999999999976432                                                


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc--
Q 002331          770 -----------------QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF--  830 (935)
Q Consensus       770 -----------------~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~--  830 (935)
                                       .+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++......  
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                             1889999999999999999999999  9999999999999999999999999998653321  


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                      .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.+...................+..+++.+.+||
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  329 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM  329 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHH
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            22334567889999999999999999999999999999998 99999987765555444445566778888999999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+||+.|   |.+||++.+|++|
T Consensus       330 ~~~l~~d---P~~Rps~~ell~~  349 (359)
T 3vhe_A          330 LDCWHGE---PSQRPTFSELVEH  349 (359)
T ss_dssp             HHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHccCC---hhhCCCHHHHHHH
Confidence            9999999   9999999999986


No 66 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-43  Score=385.17  Aligned_cols=255  Identities=20%  Similarity=0.291  Sum_probs=216.4

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCC--CceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRH--PNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~H--PNIVkl~g~~~~~~~l  748 (935)
                      .+..++|++.+.||+|+||.||++.+ +++.||||++............+.+|+.+|+.++|  +||+++++++.....+
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~   84 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI   84 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence            45668899999999999999999976 57789999998877777777889999999999976  9999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      +||||+ .+++|.+++.+. ..+++..++.|+.||+.||.|||+++  |+||||||+||||+ ++.+||+|||+++....
T Consensus        85 ~lv~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           85 YMVMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEEECC-CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             EEEEeC-CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            999995 578999999764 47899999999999999999999999  99999999999997 67899999999987643


Q ss_pred             Ccc--cCCCCCCCCCccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccc
Q 002331          829 TFL--SSKSTAGTPEWMAPEVLRN-----------EPSNEKCDVYSFGVILWELATLKLPWIGMNP-MQVVGAVGFQNRR  894 (935)
Q Consensus       829 ~~~--~~~s~~GT~~Y~APEvl~g-----------~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-~eil~~I~~~~~r  894 (935)
                      ...  ......||+.|+|||++.+           ..++.++|||||||++|+|++|+.||..... ......+......
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  239 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  239 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence            322  2335679999999999865           6688999999999999999999999987533 3444444445556


Q ss_pred             cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 ~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..++...+..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       240 ~~~~~~~~~~l~~li~~~L~~d---p~~Rpt~~e~l~hp~  276 (343)
T 3dbq_A          240 IEFPDIPEKDLQDVLKCCLKRD---PKQRISIPELLAHPY  276 (343)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             cCCcccCCHHHHHHHHHHcCCC---hhHCCCHHHHHhCcc
Confidence            6778888999999999999999   999999999999998


No 67 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.8e-43  Score=397.26  Aligned_cols=255  Identities=20%  Similarity=0.329  Sum_probs=220.7

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      .++..++|++++.||+|+||.||+|++  +++.||||++..... .......+.+|+.+|+.++|||||+++++|.+.+.
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~   89 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED   89 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            356678999999999999999999987  577899999875432 11234568899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|+||||+.+|+|..++.+. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++...
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  166 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLP  166 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence            99999999999999999864 46999999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhccccccCCCCcC
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRN---EPSNEKCDVYSFGVILWELATLKLPWIGMN---PMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g---~~~s~ksDIWSLG~ILyELLTG~~PF~~~~---~~eil~~I~~~~~r~~ip~~l  901 (935)
                      .. ......+||+.|+|||++.+   ..++.++|||||||++|+|++|+.||....   ...+...+  ......+|..+
T Consensus       167 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~p~~~  243 (384)
T 4fr4_A          167 RE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--ETTVVTYPSAW  243 (384)
T ss_dssp             TT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--HHCCCCCCTTS
T ss_pred             CC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--hhcccCCCCcC
Confidence            43 23456789999999999974   458899999999999999999999998543   33333333  34456678889


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcC-HHHHHhCcC
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTS-QAQLSHKRF  934 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPS-a~EILqHPF  934 (935)
                      ++.+.+||.+||+.|   |.+||+ +++|++|||
T Consensus       244 s~~~~~li~~lL~~d---P~~R~s~~~~l~~hp~  274 (384)
T 4fr4_A          244 SQEMVSLLKKLLEPN---PDQRFSQLSDVQNFPY  274 (384)
T ss_dssp             CHHHHHHHHHHSCSS---GGGSCCSHHHHHTSGG
T ss_pred             CHHHHHHHHHHhcCC---HhHhcccHHHHHcChh
Confidence            999999999999999   999998 999999998


No 68 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=3.5e-43  Score=367.93  Aligned_cols=253  Identities=32%  Similarity=0.537  Sum_probs=222.7

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEEC-CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWN-GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~-g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +++..++|++.+.||+|+||.||+|++. +..||||++.......   ..+.+|+.++++++||||+++++++.+....+
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY   79 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH---HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCceE
Confidence            4567789999999999999999999875 4579999987665443   45789999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++++|.+++......+++..++.++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||++......
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            999999999999999775556999999999999999999999999  999999999999999999999999999866443


Q ss_pred             c-ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          830 F-LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       830 ~-~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      . .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++.+.+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  236 (268)
T 3sxs_A          158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQ  236 (268)
T ss_dssp             CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred             hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCCCCCCCcChHHHHH
Confidence            2 22234456778999999999889999999999999999999 999999998887776664 34455667788999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ||.+||+.|   |.+||++.+|+++
T Consensus       237 li~~~l~~~---p~~Rps~~~ll~~  258 (268)
T 3sxs_A          237 IMYSCWHEL---PEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHTTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHcCCC---hhhCcCHHHHHHH
Confidence            999999999   9999999999986


No 69 
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.8e-43  Score=371.58  Aligned_cols=257  Identities=26%  Similarity=0.424  Sum_probs=221.5

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc--ccCCceEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV--TRPPNLSI  750 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~--~~~~~l~L  750 (935)
                      .++|++.+.||+|+||.||++++  +++.||||++............+.+|+.++++++||||+++++++  .....+++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            36899999999999999999987  588999999988777777778899999999999999999999987  44667999


Q ss_pred             EEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcC---CCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          751 ITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTST---PTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~g---~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ||||+++++|.+++..   ....+++..++.++.||+.||.|||+.+   .+|+||||||+||||+.++.+||+|||++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            9999999999999864   2345899999999999999999999986   249999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      .............|++.|+|||++.+..++.++|||||||++|+|++|..||...+..++...+.. .....++..+++.
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~  243 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-GKFRRIPYRYSDE  243 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCCCCCTTSCHH
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh-cccccCCcccCHH
Confidence            665432222334689999999999999999999999999999999999999999988777766643 3345677889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhCcCC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHKRFQ  935 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqHPFq  935 (935)
                      +.+||.+||+.|   |.+||++.+||+|+|.
T Consensus       244 l~~li~~~l~~~---p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          244 LNEIITRMLNLK---DYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHcCCC---cccCCCHHHHHhChhh
Confidence            999999999999   9999999999999984


No 70 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=4.5e-43  Score=381.52  Aligned_cols=254  Identities=30%  Similarity=0.455  Sum_probs=221.9

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      .++..++|++.+.||+|+||.||+|++     .+..||||++.... .......+.+|+.+|++++||||+++++++.+.
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  122 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG  122 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            356678999999999999999999987     34469999987543 455667899999999999999999999999999


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      +.++|||||+++++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++.
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            9999999999999999999876678999999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcC
Q 002331          826 KHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       826 ~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~l  901 (935)
                      ......   ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....++...+. .......+..+
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  279 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EGYRLPAPMGC  279 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTC
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCCCCCCCCc
Confidence            654321   2223346778999999999999999999999999999999 999999999888877765 34566677889


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ++.+.+||.+||..|   |.+||++.+|++
T Consensus       280 ~~~l~~li~~~l~~d---p~~Rps~~eil~  306 (325)
T 3kul_A          280 PHALHQLMLDCWHKD---RAQRPRFSQIVS  306 (325)
T ss_dssp             CHHHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCC---hhhCcCHHHHHH
Confidence            999999999999999   999999999986


No 71 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.8e-44  Score=395.98  Aligned_cols=250  Identities=26%  Similarity=0.440  Sum_probs=216.8

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++....... .....+.+|+.+++.++||||+++++++.....+++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            47899999999999999999987  68899999987542211 1234678999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+ +|+|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++....... 
T Consensus        88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-  162 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-  162 (336)
T ss_dssp             ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred             EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence            9999 67899888653 46999999999999999999999999  9999999999999999999999999998765442 


Q ss_pred             cCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.........+  ......+|..+++.+.+||.
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li~  240 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQSLIR  240 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--CSSCCCCCTTSCHHHHHHHH
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--HcCCCCCcccCCHHHHHHHH
Confidence            2345689999999999998876 78999999999999999999999887655443333  33445678889999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||++++|++|||
T Consensus       241 ~~L~~d---P~~Rpt~~eil~hp~  261 (336)
T 3h4j_B          241 RMIVAD---PMQRITIQEIRRDPW  261 (336)
T ss_dssp             TTSCSS---GGGSCCHHHHTTCHH
T ss_pred             HHcCCC---hhHCcCHHHHHhChh
Confidence            999999   999999999999998


No 72 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=3.7e-43  Score=370.62  Aligned_cols=255  Identities=31%  Similarity=0.493  Sum_probs=222.3

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC-CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN-GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~-g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..+++..++|++.+.||+|+||.||++++. +..||||++.......   ..+.+|+.++++++||||+++++++.+.+.
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   93 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRP   93 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEecCCC
Confidence            346678899999999999999999999885 5579999998665443   457899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++...
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            99999999999999999876667999999999999999999999999  9999999999999999999999999998664


Q ss_pred             CCc-ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHH
Q 002331          828 NTF-LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       828 ~~~-~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                      ... .......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+. .......+..+++.+
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  250 (283)
T 3gen_A          172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASEKV  250 (283)
T ss_dssp             CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHh-cccCCCCCCcCCHHH
Confidence            432 22233456788999999999999999999999999999998 999999998888777664 344556678889999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+||.+||+.|   |.+||++.+|++|
T Consensus       251 ~~li~~~l~~~---p~~Rps~~~ll~~  274 (283)
T 3gen_A          251 YTIMYSCWHEK---ADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHTTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHccCC---hhHCcCHHHHHHH
Confidence            99999999999   9999999999986


No 73 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=5.3e-43  Score=378.06  Aligned_cols=259  Identities=33%  Similarity=0.551  Sum_probs=217.3

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      ..+++..++|.+.++||+|+||.||+|++.+ .+|||+++...........+.+|+.+|++++||||+++++++.. +.+
T Consensus        29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~  106 (307)
T 3lb7_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL  106 (307)
T ss_dssp             CCCBCCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred             ceEEecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcE
Confidence            3467888999999999999999999998755 59999988766666777889999999999999999999998754 568


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++....
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~  184 (307)
T 3lb7_A          107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred             EEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence            9999999999999999877778999999999999999999999999  99999999999999999999999999986542


Q ss_pred             --CcccCCCCCCCCCccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-ccccc---cCCCC
Q 002331          829 --TFLSSKSTAGTPEWMAPEVLR---NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVG-FQNRR---LEIPK  899 (935)
Q Consensus       829 --~~~~~~s~~GT~~Y~APEvl~---g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~-~~~~r---~~ip~  899 (935)
                        .........||+.|+|||++.   +..++.++|||||||++|+|++|+.||...+..+....+. .....   ..+..
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (307)
T 3lb7_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK  264 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCS
T ss_pred             ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhc
Confidence              112233457999999999986   6668899999999999999999999999876655433322 11122   23456


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          900 ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+++.+.+||.+||+.+   |.+||++.+|+++.+
T Consensus       265 ~~~~~l~~li~~~l~~~---p~~RPs~~~il~~l~  296 (307)
T 3lb7_A          265 NCPKAMKRLVADCVKKV---KEERPLFPQILSSIE  296 (307)
T ss_dssp             SSCHHHHHHHHHHSCSS---STTSCCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhhCC---hhhCcCHHHHHHHHH
Confidence            78999999999999999   999999999998743


No 74 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5.2e-43  Score=393.17  Aligned_cols=252  Identities=23%  Similarity=0.341  Sum_probs=221.1

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++....  ......+.+|+.+|+.++||||+++++++.+...+++||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            36799999999999999999987  57889999987553  234457889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC--CCcEEEEeccccccccCCc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK--NWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~--~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.  .+.+||+|||+++......
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence            999999999999876667999999999999999999999999  999999999999974  5789999999998765432


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR--LEIPKELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r--~~ip~~ls~~L~dL  908 (935)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+......  ......+++++.+|
T Consensus       206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  284 (387)
T 1kob_A          206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF  284 (387)
T ss_dssp             -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHH
T ss_pred             -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHH
Confidence             223357999999999999999999999999999999999999999999887777766433222  23345789999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       285 i~~~L~~d---P~~Rpt~~ell~hp~  307 (387)
T 1kob_A          285 IKNLLQKE---PRKRLTVHDALEHPW  307 (387)
T ss_dssp             HHTTSCSS---GGGSCCHHHHHTSTT
T ss_pred             HHHHcCCC---hhHCcCHHHHhhCcc
Confidence            99999999   999999999999998


No 75 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.1e-43  Score=385.99  Aligned_cols=253  Identities=21%  Similarity=0.238  Sum_probs=204.4

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++.+.||+|+||+||+|.+  +++.||||++............+.+|+.+|++++||||+++++++.+.+.++|||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            46899999999999999999976  6889999999776555555667789999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee-----cCCCcEEEEecccccccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV-----DKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL-----d~~g~VKL~DFGlA~~~~  827 (935)
                      ||+++ +|.+++.+. ..+++..++.|+.||+.||.|||+++  |+||||||+||||     +..+.+||+|||+++...
T Consensus       113 e~~~~-~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          113 EYAEN-DLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             ECCSE-EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             ecCCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            99975 999998764 36899999999999999999999999  9999999999999     455669999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC----------
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE----------  896 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~----------  896 (935)
                      ..........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.+..+......+.          
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL  268 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence            443444556789999999999875 489999999999999999999999999887766655432111100          


Q ss_pred             ------------------CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          897 ------------------IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       897 ------------------ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                        ++..+++++.+||.+||+.|   |.+||+++|+|+|||
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  321 (329)
T 3gbz_A          269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD---PVKRISAKNALEHPY  321 (329)
T ss_dssp             TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS---GGGSCCHHHHHTSGG
T ss_pred             hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC---hhhCCCHHHHhCCcc
Confidence                              11226789999999999999   999999999999998


No 76 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=4.4e-43  Score=382.17  Aligned_cols=253  Identities=26%  Similarity=0.364  Sum_probs=225.5

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|.+++.||+|+||.||++++  .++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            346899999999999999999987  477899999876543 44566778999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.......
T Consensus       119 v~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          119 VLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            99999999999998653 46899999999999999999999999  9999999999999999999999999998765443


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIW  910 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~  910 (935)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+....+.  .....++..+++.+.+||.
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~  273 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLIQ  273 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHHH
T ss_pred             ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh--cCCCCCCccCCHHHHHHHH
Confidence            44455679999999999999999999999999999999999999999988777666553  3345677889999999999


Q ss_pred             HHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          911 ECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       911 qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||+.|   |.+||++.+||+|||
T Consensus       274 ~~l~~d---p~~Rps~~ell~~~~  294 (335)
T 2owb_A          274 KMLQTD---PTARPTINELLNDEF  294 (335)
T ss_dssp             HHTCSS---GGGSCCGGGGGGSHH
T ss_pred             HHccCC---hhHCcCHHHHhcCcc
Confidence            999999   999999999999998


No 77 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=5.1e-43  Score=366.61  Aligned_cols=246  Identities=21%  Similarity=0.289  Sum_probs=213.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++............+.+|+.++..+ +||||+++++++.+.+.+++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5799999999999999999987  588999999987655556667888999999999 9999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC-----------------
Q 002331          753 EFLPRGSLFRILHRP---HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN-----------------  812 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~---~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~-----------------  812 (935)
                      ||+++++|.+++.+.   ...+++..++.|+.||+.||.|||+++  |+||||||+||||+.+                 
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~  168 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS  168 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC-------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence            999999999999653   246899999999999999999999999  9999999999999844                 


Q ss_pred             --CcEEEEeccccccccCCcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh
Q 002331          813 --WNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVG  889 (935)
Q Consensus       813 --g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~  889 (935)
                        ..+||+|||++......    ....||+.|+|||++.+. .++.++|||||||++|+|++|.+|+..........   
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~---  241 (289)
T 1x8b_A          169 NKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR---  241 (289)
T ss_dssp             -CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHH---
T ss_pred             CceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHH---
Confidence              47999999999876543    234689999999999876 56789999999999999999998876554332221   


Q ss_pred             ccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          890 FQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       890 ~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                       ......++..+++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       242 -~~~~~~~~~~~~~~~~~li~~~l~~d---p~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          242 -QGRLPRIPQVLSQEFTELLKVMIHPD---PERRPSAMALVKHSV  282 (289)
T ss_dssp             -TTCCCCCSSCCCHHHHHHHHHHTCSS---GGGSCCHHHHHTCTT
T ss_pred             -cCCCCCCCcccCHHHHHHHHHHhCCC---cccCCCHHHHhhChH
Confidence             33455678889999999999999999   999999999999999


No 78 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=378.63  Aligned_cols=248  Identities=23%  Similarity=0.242  Sum_probs=208.9

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      ++|++.++||+|+||+||+|++  +++.||||++............+..|+..+..+ +||||++++++|.+.+.+++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            6799999999999999999987  588999999877655555555666666666665 9999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS  832 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~  832 (935)
                      ||+ +++|.+++...+..+++..++.|+.||+.||.|||+.+  |+||||||+||||+.++.+||+|||++....... .
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-~  212 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-A  212 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeecccCC-C
Confidence            999 66999988766667999999999999999999999998  9999999999999999999999999988765432 2


Q ss_pred             CCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHH
Q 002331          833 SKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWEC  912 (935)
Q Consensus       833 ~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qC  912 (935)
                      .....||+.|+|||++.+ .++.++|||||||++|||++|..||.+.....   .+.....+..++..+++.+.+||.+|
T Consensus       213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~  288 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQGYLPPEFTAGLSSELRSVLVMM  288 (311)
T ss_dssp             --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred             CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhccCCCcccccCCCHHHHHHHHHH
Confidence            344579999999999987 68999999999999999999977766543322   22222333445567899999999999


Q ss_pred             HhhCCCCcCCCcCHHHHHhCcC
Q 002331          913 WQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       913 L~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |+.|   |.+||++.+||+|||
T Consensus       289 L~~d---P~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          289 LEPD---PKLRATAEALLALPV  307 (311)
T ss_dssp             SCSS---TTTSCCHHHHHTSGG
T ss_pred             cCCC---hhhCcCHHHHHhCcc
Confidence            9999   999999999999999


No 79 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1e-43  Score=385.46  Aligned_cols=252  Identities=23%  Similarity=0.305  Sum_probs=206.7

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++++.||+|+||.||+|++  +++.||||++..... ......+.+|+.+|+.++||||+++++++...+.+++|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            6899999999999999999987  578899999865432 1122234579999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccC
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSS  833 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~  833 (935)
                      |++ ++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++.........
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  157 (324)
T 3mtl_A           81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  157 (324)
T ss_dssp             CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence            997 5899988776667999999999999999999999999  9999999999999999999999999998765443444


Q ss_pred             CCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----------------
Q 002331          834 KSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL-----------------  895 (935)
Q Consensus       834 ~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~-----------------  895 (935)
                      ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......+                 
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            45678999999999887 568999999999999999999999999988877665543211110                 


Q ss_pred             -----------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 -----------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 -----------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                 .....+++++.+||.+||+.|   |.+||+++|+|+|||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  284 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFE---GRNRISAEDAMKHPF  284 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSS---GGGSCCHHHHTTSGG
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcC---cccCCCHHHHhcChh
Confidence                       012357889999999999999   999999999999999


No 80 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=3.5e-43  Score=380.10  Aligned_cols=256  Identities=29%  Similarity=0.453  Sum_probs=223.4

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEECC-------ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWNG-------TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV  742 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-------~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~  742 (935)
                      .+++..++|++++.||+|+||.||+|++.+       +.||||++.... .......+.+|+.+++.++||||+++++++
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            456777899999999999999999998753       789999987553 445567899999999999999999999999


Q ss_pred             ccCCceEEEEeeCCCCCHHHHHcCCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEe
Q 002331          743 TRPPNLSIITEFLPRGSLFRILHRPH-----------------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVH  799 (935)
Q Consensus       743 ~~~~~l~LVmEy~~gGsL~dlL~~~~-----------------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIH  799 (935)
                      .+.+.+++||||+++++|.+++....                       ..+++..++.|+.||+.||.|||+++  |+|
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH  197 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVH  197 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eec
Confidence            99999999999999999999996531                       56899999999999999999999999  999


Q ss_pred             eCCCCCCeeecCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCC
Q 002331          800 RDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPW  876 (935)
Q Consensus       800 rDLKPeNILLd~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF  876 (935)
                      |||||+||||+.++.+||+|||+++......  .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            9999999999999999999999998654322  12234567889999999999999999999999999999999 99999


Q ss_pred             CCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          877 IGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       877 ~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+....++...+. ......++..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       278 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~---p~~Rps~~~~~~~  329 (343)
T 1luf_A          278 YGMAHEEVIYYVR-DGNILACPENCPLELYNLMRLCWSKL---PADRPSFCSIHRI  329 (343)
T ss_dssp             TTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CCCChHHHHHHHh-CCCcCCCCCCCCHHHHHHHHHHcccC---cccCCCHHHHHHH
Confidence            9998888777664 34455678889999999999999999   9999999999864


No 81 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.3e-43  Score=376.66  Aligned_cols=255  Identities=27%  Similarity=0.363  Sum_probs=209.3

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC---HHHHHHHHHHHHHHHHc---CCCceeeeeccccc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS---GAALLEFKREVKIMRRL---RHPNVVLFMGAVTR  744 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~---~~~~~~f~~Ei~iL~~L---~HPNIVkl~g~~~~  744 (935)
                      +..++|++.+.||+|+||+||+|++  +++.||||++......   ......+.+|+.+++.+   +||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            3457899999999999999999985  6889999998754321   11123455677777666   59999999999876


Q ss_pred             CC-----ceEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEE
Q 002331          745 PP-----NLSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVS  818 (935)
Q Consensus       745 ~~-----~l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~  818 (935)
                      ..     .+++||||+. ++|.+++.+.. ..+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEEC
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEe
Confidence            55     4899999997 59999997643 34899999999999999999999999  9999999999999999999999


Q ss_pred             eccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc---
Q 002331          819 DFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL---  895 (935)
Q Consensus       819 DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~---  895 (935)
                      |||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+....+......+   
T Consensus       163 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (308)
T 3g33_A          163 DFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED  241 (308)
T ss_dssp             SCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            99999866543 22345678999999999999999999999999999999999999999988877766553211100   


Q ss_pred             ----------------------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 ----------------------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ----------------------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                            .+...+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~h~~  299 (308)
T 3g33_A          242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFN---PHKRISAFRALQHSY  299 (308)
T ss_dssp             TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSS---TTTSCCHHHHHTSTT
T ss_pred             hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCC---CccCCCHHHHhcCcc
Confidence                                  012357899999999999999   999999999999999


No 82 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=5.8e-43  Score=377.97  Aligned_cols=252  Identities=25%  Similarity=0.387  Sum_probs=220.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++|++++.||+|+||.||+|++  +++.||||++.......    .....+.+|+.++++++||||+++++++.+...++
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            5799999999999999999987  58899999987654322    13567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC----cEEEEecccccc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW----NVKVSDFGLSRL  825 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g----~VKL~DFGlA~~  825 (935)
                      +||||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++    .+||+|||++..
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            999999999999999763 46899999999999999999999999  99999999999999887    799999999987


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcH
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDP  903 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~  903 (935)
                      ..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+.......  .++..+++
T Consensus       169 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (321)
T 2a2a_A          169 IEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE  247 (321)
T ss_dssp             CCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred             cCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCH
Confidence            65432 2344679999999999999999999999999999999999999999988887776664322211  12356889


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||++.++|+|||
T Consensus       248 ~~~~li~~~l~~d---p~~Rps~~e~l~hp~  275 (321)
T 2a2a_A          248 LAKDFIRKLLVKE---TRKRLTIQEALRHPW  275 (321)
T ss_dssp             HHHHHHHTTSCSS---TTTSCCHHHHHHSTT
T ss_pred             HHHHHHHHHcCCC---hhhCcCHHHHhcCcc
Confidence            9999999999999   999999999999999


No 83 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.2e-43  Score=371.89  Aligned_cols=254  Identities=24%  Similarity=0.418  Sum_probs=222.7

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..+..++|++.+.||+|+||.||+|++  +++.||||++....... .....+.+|+.+++.++||||+++++++.+.+.
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   88 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR   88 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence            345668999999999999999999987  46789999986543211 123568899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +++||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++....
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            99999999999999999753 36899999999999999999999998  9999999999999999999999999987654


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      ..  ......|++.|+|||++.+..++.++|||||||++|+|++|..||......+....+.  .....++..++..+.+
T Consensus       166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  241 (284)
T 2vgo_A          166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFLSDGSKD  241 (284)
T ss_dssp             SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHH
T ss_pred             cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh--ccccCCCCcCCHHHHH
Confidence            32  2344678999999999999999999999999999999999999999988877766653  3445677889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||++.+|++|||
T Consensus       242 li~~~l~~~---p~~Rps~~~ll~h~~  265 (284)
T 2vgo_A          242 LISKLLRYH---PPQRLPLKGVMEHPW  265 (284)
T ss_dssp             HHHHHSCSS---GGGSCCHHHHHTCHH
T ss_pred             HHHHHhhcC---HhhCCCHHHHhhCHH
Confidence            999999999   999999999999998


No 84 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=4.6e-43  Score=388.05  Aligned_cols=252  Identities=26%  Similarity=0.353  Sum_probs=203.9

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ...++|++.+.||+|+||+||++++  +++.||||++.......   ..+.+|+.+++.++||||+++++++.+...+++
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID---ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC---HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc---HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence            4457899999999999999999987  68899999997654322   357799999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc--EEEEeccccccccC
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN--VKVSDFGLSRLKHN  828 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~--VKL~DFGlA~~~~~  828 (935)
                      ||||+++|+|.+++.+. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.  +||+|||+++....
T Consensus        94 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           94 IMEYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             EEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            99999999999998653 46999999999999999999999999  999999999999987665  99999999975432


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCch-hHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccccCCCCcCcH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEK-CDVYSFGVILWELATLKLPWIGMNP----MQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~k-sDIWSLG~ILyELLTG~~PF~~~~~----~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      . .......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+...    ......+............+++
T Consensus       171 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  249 (361)
T 3uc3_A          171 H-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP  249 (361)
T ss_dssp             -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCH
T ss_pred             c-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCH
Confidence            2 22344679999999999988887655 8999999999999999999987543    3344444323333333346899


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+++||.+||+.|   |.+||++.+|++|||
T Consensus       250 ~~~~li~~~L~~d---P~~Rps~~ell~hp~  277 (361)
T 3uc3_A          250 ECCHLISRIFVAD---PATRISIPEIKTHSW  277 (361)
T ss_dssp             HHHHHHHHHSCSC---TTTSCCHHHHHTSHH
T ss_pred             HHHHHHHHHccCC---hhHCcCHHHHHhCcc
Confidence            9999999999999   999999999999998


No 85 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=3.4e-43  Score=376.58  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=203.5

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC-------
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP-------  746 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~-------  746 (935)
                      ++|++++.||+|+||.||+|++  +++.||||++.... .......+.+|+.+|++++||||++++++|.+..       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            5799999999999999999987  58899999997654 3345567899999999999999999999885543       


Q ss_pred             --------------------------------------------------ceEEEEeeCCCCCHHHHHcCCC--CCCCHH
Q 002331          747 --------------------------------------------------NLSIITEFLPRGSLFRILHRPH--CQVDEK  774 (935)
Q Consensus       747 --------------------------------------------------~l~LVmEy~~gGsL~dlL~~~~--~~lse~  774 (935)
                                                                        .+++|||||++++|.+++.+..  ....+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              2799999999999999997643  235566


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc------------ccCCCCCCCCCc
Q 002331          775 RRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF------------LSSKSTAGTPEW  842 (935)
Q Consensus       775 ~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~------------~~~~s~~GT~~Y  842 (935)
                      .++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++......            .......||+.|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            78999999999999999999  9999999999999999999999999998765431            122345799999


Q ss_pred             cCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCC
Q 002331          843 MAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHI  922 (935)
Q Consensus       843 ~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~k  922 (935)
                      +|||++.+..++.++|||||||++|+|++|..|+...  ......+. ....+......++.+.+||.+||+.|   |.+
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~---p~~  316 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPS---PTE  316 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSS---GGG
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhh-ccCCCcccccCChhHHHHHHHHccCC---CCc
Confidence            9999999999999999999999999999987765321  12222221 11112222445678899999999999   999


Q ss_pred             CcCHHHHHhCcC
Q 002331          923 RTSQAQLSHKRF  934 (935)
Q Consensus       923 RPSa~EILqHPF  934 (935)
                      ||++.++|+|||
T Consensus       317 Rps~~~~l~~~~  328 (332)
T 3qd2_B          317 RPEATDIIENAI  328 (332)
T ss_dssp             SCCHHHHHHSTT
T ss_pred             CCCHHHHhhchh
Confidence            999999999999


No 86 
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.1e-42  Score=371.09  Aligned_cols=250  Identities=26%  Similarity=0.471  Sum_probs=224.0

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      +.|++.+.||+|+||.||+|.+  .++.||||++...... .....+.+|+.+++.++||||+++++++.+...+++|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            5699999999999999999986  5789999998765432 235678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccC
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSS  833 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~  833 (935)
                      |+++++|.+++..  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++..........
T Consensus       101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  176 (303)
T 3a7i_A          101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR  176 (303)
T ss_dssp             CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred             eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence            9999999999975  46899999999999999999999999  9999999999999999999999999998766544444


Q ss_pred             CCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHH
Q 002331          834 KSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECW  913 (935)
Q Consensus       834 ~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL  913 (935)
                      ....|++.|+|||++.+..++.++|||||||++|+|++|..||...........+. ......++..++..+.+||.+||
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSCCCCCCSSCCHHHHHHHHHHC
T ss_pred             CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-cCCCCCCccccCHHHHHHHHHHc
Confidence            56679999999999999999999999999999999999999999988877766553 34455677889999999999999


Q ss_pred             hhCCCCcCCCcCHHHHHhCcC
Q 002331          914 QTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       914 ~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +.|   |.+||++.+|++|||
T Consensus       256 ~~d---p~~Rps~~~ll~~~~  273 (303)
T 3a7i_A          256 NKE---PSFRPTAKELLKHKF  273 (303)
T ss_dssp             CSS---GGGSCCHHHHTTCHH
T ss_pred             CCC---hhhCcCHHHHhhChh
Confidence            999   999999999999998


No 87 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.7e-43  Score=381.92  Aligned_cols=254  Identities=27%  Similarity=0.388  Sum_probs=212.9

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccC---CCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQD---FSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~---~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++....   ........+.+|+.++++++||||+++++++.+.+.+++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            5799999999999999999987  57789999987542   223456678999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCC---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Q 002331          751 ITEFLPRGSLFRILHRP---------------------------------------HCQVDEKRRIKMALDVARGMNCLH  791 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~---------------------------------------~~~lse~~il~Ia~QIa~AL~yLH  791 (935)
                      ||||+++|+|.+++...                                       ...+++..++.|+.||+.||.|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998520                                       112467788899999999999999


Q ss_pred             hcCCCEEeeCCCCCCeeecCCC--cEEEEeccccccccCCc----ccCCCCCCCCCccCcccccC--CCCCchhHHHHHH
Q 002331          792 TSTPTIVHRDLKSPNLLVDKNW--NVKVSDFGLSRLKHNTF----LSSKSTAGTPEWMAPEVLRN--EPSNEKCDVYSFG  863 (935)
Q Consensus       792 s~g~~IIHrDLKPeNILLd~~g--~VKL~DFGlA~~~~~~~----~~~~s~~GT~~Y~APEvl~g--~~~s~ksDIWSLG  863 (935)
                      +++  |+||||||+||||+.++  .+||+|||+++......    .......||+.|+|||++.+  ..++.++||||||
T Consensus       186 ~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          186 NQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             HTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred             HCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence            999  99999999999998766  89999999998653321    12345679999999999975  6789999999999


Q ss_pred             HHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          864 VILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       864 ~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |++|+|++|+.||.+.+..+....+.........+  ..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       264 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~---p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN---VDERFDAMRALQHPW  333 (345)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSC---TTTSCCHHHHHHSHH
T ss_pred             HHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCC---hhHCCCHHHHhcChh
Confidence            99999999999999998888777765444333333  347899999999999999   999999999999998


No 88 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=6.1e-43  Score=385.64  Aligned_cols=249  Identities=28%  Similarity=0.417  Sum_probs=219.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      +.|.+.+.||+|+||.||+|++  +++.||||++...... ......+.+|+.+|++++||||+++++++...+.+++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4699999999999999999986  6889999999765433 345567899999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS  832 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~  832 (935)
                      ||+. |+|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++......   
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---  207 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  207 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence            9997 5888888654567999999999999999999999999  999999999999999999999999999865432   


Q ss_pred             CCCCCCCCCccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          833 SKSTAGTPEWMAPEVLR---NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       833 ~~s~~GT~~Y~APEvl~---g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                       ....||+.|+|||++.   +..++.++|||||||++|||++|+.||.+.+.......+.....+...+..+++.+.+||
T Consensus       208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  286 (348)
T 1u5q_A          208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV  286 (348)
T ss_dssp             -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHH
T ss_pred             -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence             3467999999999985   567899999999999999999999999998887777666544444455677899999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||+.|   |.+||++++||+|||
T Consensus       287 ~~~l~~d---P~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          287 DSCLQKI---PQDRPTSEVLLKHRF  308 (348)
T ss_dssp             HHHTCSS---GGGSCCHHHHTTCHH
T ss_pred             HHHcccC---hhhCcCHHHHhhChh
Confidence            9999999   999999999999998


No 89 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=9.3e-43  Score=366.47  Aligned_cols=247  Identities=24%  Similarity=0.369  Sum_probs=216.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||.||+|.+  .+..||+|++.......  ...+.+|+.++++++||||+++++++.+...+++|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            5799999999999999999987  45689999987654332  4568899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~~~  830 (935)
                      |+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||   +.++.+||+|||++...... 
T Consensus        87 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~-  162 (277)
T 3f3z_A           87 LCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-  162 (277)
T ss_dssp             CCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-
T ss_pred             ccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-
Confidence            99999999988653 46899999999999999999999999  9999999999999   78899999999999876543 


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC----CcCcHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP----KELDPLVA  906 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip----~~ls~~L~  906 (935)
                      .......||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+....+...  ...++    ..+++.+.
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  239 (277)
T 3f3z_A          163 KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG--TFTFPEKDWLNVSPQAE  239 (277)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCHHHHTTSCHHHH
T ss_pred             cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCchhhhcCCHHHH
Confidence            233456799999999998765 889999999999999999999999999888877766433  22333    26889999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||.+||+.|   |.+||++.++|+|||
T Consensus       240 ~li~~~l~~d---p~~R~s~~~~l~h~~  264 (277)
T 3f3z_A          240 SLIRRLLTKS---PKQRITSLQALEHEW  264 (277)
T ss_dssp             HHHHHHTCSS---TTTSCCHHHHTTSHH
T ss_pred             HHHHHHccCC---hhhCcCHHHHhcCHH
Confidence            9999999999   999999999999998


No 90 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1e-42  Score=380.72  Aligned_cols=254  Identities=24%  Similarity=0.334  Sum_probs=214.8

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-----CCceeeeecc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-----HPNVVLFMGA  741 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-----HPNIVkl~g~  741 (935)
                      ....+..++|++.++||+|+||.||+|++  +++.||||++...   ......+..|+.+++.+.     ||||++++++
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~  104 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGK  104 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence            44455668999999999999999999988  6889999998642   344556788999999996     9999999999


Q ss_pred             cccCCceEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---------
Q 002331          742 VTRPPNLSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---------  811 (935)
Q Consensus       742 ~~~~~~l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---------  811 (935)
                      +...+.+++||||+ +++|.+++.+.. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.         
T Consensus       105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEE
T ss_pred             eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccc
Confidence            99999999999999 889999987543 45899999999999999999999999  999999999999975         


Q ss_pred             ----------------CCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 002331          812 ----------------NWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLP  875 (935)
Q Consensus       812 ----------------~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~P  875 (935)
                                      ++.+||+|||+++.....   .....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence                            789999999999865432   2356789999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHhhcccccc------------------------CCC--------------------CcCcHHHHHHHHH
Q 002331          876 WIGMNPMQVVGAVGFQNRRL------------------------EIP--------------------KELDPLVARIIWE  911 (935)
Q Consensus       876 F~~~~~~eil~~I~~~~~r~------------------------~ip--------------------~~ls~~L~dLI~q  911 (935)
                      |...+..+....+.......                        ..|                    ...++.+.+||.+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  338 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS  338 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHH
Confidence            99888766655442211110                        011                    1123778899999


Q ss_pred             HHhhCCCCcCCCcCHHHHHhCcC
Q 002331          912 CWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       912 CL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||+.|   |.+||++.++|+|||
T Consensus       339 ~L~~d---P~~Rpta~elL~hp~  358 (360)
T 3llt_A          339 ILQID---PTLRPSPAELLKHKF  358 (360)
T ss_dssp             HCCSS---GGGSCCHHHHTTSGG
T ss_pred             HhcCC---hhhCCCHHHHhcCcc
Confidence            99999   999999999999999


No 91 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.2e-43  Score=379.08  Aligned_cols=259  Identities=28%  Similarity=0.402  Sum_probs=220.6

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeec
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMG  740 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g  740 (935)
                      ..+++..++|.+++.||+|+||.||+|++       .+..||||++.... .......+.+|+.+|+++ +||||+++++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  116 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLG  116 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            45778889999999999999999999986       34579999987543 233456788999999999 8999999999


Q ss_pred             ccccCCceEEEEeeCCCCCHHHHHcCCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002331          741 AVTRPPNLSIITEFLPRGSLFRILHRPHC----------------------QVDEKRRIKMALDVARGMNCLHTSTPTIV  798 (935)
Q Consensus       741 ~~~~~~~l~LVmEy~~gGsL~dlL~~~~~----------------------~lse~~il~Ia~QIa~AL~yLHs~g~~II  798 (935)
                      ++...+.+++||||+++|+|.+++.....                      .+++..++.++.||+.||.|||++|  |+
T Consensus       117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iv  194 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CV  194 (344)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred             EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cc
Confidence            99999999999999999999999976432                      3789999999999999999999999  99


Q ss_pred             eeCCCCCCeeecCCCcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 002331          799 HRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLP  875 (935)
Q Consensus       799 HrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~P  875 (935)
                      ||||||+||||+.++.+||+|||++........  ......+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999986543321  1223456788999999999999999999999999999998 9999


Q ss_pred             CCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCc
Q 002331          876 WIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKR  933 (935)
Q Consensus       876 F~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHP  933 (935)
                      |.+.........+.........+..+++.+.+||.+||..|   |.+||++.+|+++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~~l  329 (344)
T 1rjb_A          275 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFD---SRKRPSFPNLTSFL  329 (344)
T ss_dssp             STTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHHH
T ss_pred             cccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC---chhCcCHHHHHHHH
Confidence            99877655554444455566778889999999999999999   99999999999863


No 92 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=7.5e-43  Score=384.27  Aligned_cols=251  Identities=22%  Similarity=0.314  Sum_probs=201.0

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ...++|++.+.||+|+||.||+|++  .++.||||++....    ....+.+|+.+|++++||||+++++++...+.+++
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  125 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL  125 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence            3457899999999999999999988  46789999987543    23467789999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEecccccccc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLSRLKH  827 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA~~~~  827 (935)
                      ||||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.   ++.+||+|||+++...
T Consensus       126 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          126 VLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             EECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             EEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            99999999999999764 46899999999999999999999999  999999999999975   8999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc--CCCCcCcHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ-VVGAVGFQNRRL--EIPKELDPL  904 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e-il~~I~~~~~r~--~ip~~ls~~  904 (935)
                      ... ......||+.|+|||++.+..++.++|||||||++|+|++|..||......+ ....+.......  .....++..
T Consensus       203 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  281 (349)
T 2w4o_A          203 HQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN  281 (349)
T ss_dssp             -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred             ccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHH
Confidence            432 2344679999999999999999999999999999999999999998776554 344443222221  233568999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +.+||.+||+.|   |.+||++.++|+|||
T Consensus       282 ~~~li~~~L~~d---P~~Rpt~~e~l~hp~  308 (349)
T 2w4o_A          282 AKDLVRKLIVLD---PKKRLTTFQALQHPW  308 (349)
T ss_dssp             HHHHHHTTSCSS---GGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHccCC---hhhCcCHHHHhcCcc
Confidence            999999999999   999999999999999


No 93 
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=5.2e-43  Score=380.14  Aligned_cols=257  Identities=25%  Similarity=0.386  Sum_probs=212.7

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHH-HHHcCCCceeeeecccccCC
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKI-MRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~i-L~~L~HPNIVkl~g~~~~~~  746 (935)
                      .+++..++|++++.||+|+||.||+|++  +++.||||++........ ...+..|+.+ ++.++||||+++++++...+
T Consensus        45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~  123 (340)
T 3an0_A           45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREG  123 (340)
T ss_dssp             CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSS
T ss_pred             ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC
Confidence            3567778999999999999999999987  788999999876654443 3445555555 67789999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCCcEEEEeccc
Q 002331          747 NLSIITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNWNVKVSDFGL  822 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g~VKL~DFGl  822 (935)
                      .+++||||+++ +|.+++..   ....+++..++.|+.||+.||.|||++ |  |+||||||+||||+.++.+||+|||+
T Consensus       124 ~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~  200 (340)
T 3an0_A          124 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGI  200 (340)
T ss_dssp             CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred             cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCC
Confidence            99999999975 89888753   456799999999999999999999987 8  99999999999999999999999999


Q ss_pred             cccccCCcccCCCCCCCCCccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhccccccCC
Q 002331          823 SRLKHNTFLSSKSTAGTPEWMAPEVLRN----EPSNEKCDVYSFGVILWELATLKLPWIGM-NPMQVVGAVGFQNRRLEI  897 (935)
Q Consensus       823 A~~~~~~~~~~~s~~GT~~Y~APEvl~g----~~~s~ksDIWSLG~ILyELLTG~~PF~~~-~~~eil~~I~~~~~r~~i  897 (935)
                      ++...... ......||+.|+|||++.+    ..++.++|||||||++|+|++|+.||... .....+..+.........
T Consensus       201 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  279 (340)
T 3an0_A          201 SGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP  279 (340)
T ss_dssp             HHHHSCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC
T ss_pred             ceeccccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCC
Confidence            98664431 1223579999999999754    46889999999999999999999999874 333444333322222223


Q ss_pred             CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          898 PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       898 p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +..+++.+.+||.+||+.|   |.+||++.+|++|||
T Consensus       280 ~~~~~~~~~~li~~~l~~d---p~~Rps~~ell~hp~  313 (340)
T 3an0_A          280 ADKFSAEFVDFTSQCLKKN---SKERPTYPELMQHPF  313 (340)
T ss_dssp             GGGSCHHHHHHHHHHTCSS---GGGSCCHHHHTTSHH
T ss_pred             cccCCHHHHHHHHHHccCC---cccCcCHHHHhcCcC
Confidence            3568999999999999999   999999999999998


No 94 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.1e-43  Score=381.71  Aligned_cols=255  Identities=23%  Similarity=0.247  Sum_probs=211.1

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH---HHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG---AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~---~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      ..++|++++.||+|+||.||+|++  +++.||||++.......   .....+.+|+.+++.++||||+++++++.+...+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            347899999999999999999987  47899999987543222   1234678999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++ +|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++....
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  164 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence            999999986 899999876677899999999999999999999999  99999999999999999999999999987755


Q ss_pred             CcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------------
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL------------  895 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~------------  895 (935)
                      .........||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+......+            
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence            44444567899999999999764 58999999999999999999999999988877665543211110            


Q ss_pred             ---------C-----CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 ---------E-----IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ---------~-----ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                               .     +...+++.+.+||.+||+.|   |.+||++.|+|+|||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~h~~  294 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN---PCARITATQALKMKY  294 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSS---TTTSCCHHHHHTSGG
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccC---hhhCCCHHHHhcChh
Confidence                     0     11456789999999999999   999999999999998


No 95 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.2e-42  Score=362.43  Aligned_cols=253  Identities=31%  Similarity=0.515  Sum_probs=223.7

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      +.+..++|++.+.||+|+||.||++.+ +++.||||++.......   ..+.+|+.++++++||||+++++++.+.+.++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC   79 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeE
Confidence            567778999999999999999999987 67789999998765443   46889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.+||+|||++......
T Consensus        80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  157 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  157 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccc
Confidence            999999999999999876667899999999999999999999999  999999999999999999999999999866432


Q ss_pred             c-ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          830 F-LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       830 ~-~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      . .......+++.|+|||++.+..++.++|||||||++|+|++ |+.||......+....+. ...+...+..++..+.+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~  236 (267)
T 3t9t_A          158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQ  236 (267)
T ss_dssp             HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred             cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh-cCCcCCCCccCcHHHHH
Confidence            1 12234567789999999999999999999999999999999 899999998888777664 33455667788999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ||.+||+.|   |.+||++.+++++
T Consensus       237 li~~~l~~~---p~~Rps~~~ll~~  258 (267)
T 3t9t_A          237 IMNHCWRER---PEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHccCC---hhhCcCHHHHHHH
Confidence            999999999   9999999999875


No 96 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=384.74  Aligned_cols=257  Identities=30%  Similarity=0.508  Sum_probs=225.6

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeee
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLF  738 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl  738 (935)
                      ..+++..++|.+++.||+|+||.||+|++.         +..||||++... ........+.+|+.+++++ +|||||++
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~  140 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINL  140 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhh
Confidence            446778899999999999999999999852         257999998765 3455667889999999999 99999999


Q ss_pred             ecccccCCceEEEEeeCCCCCHHHHHcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCC
Q 002331          739 MGAVTRPPNLSIITEFLPRGSLFRILHRPH---------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLK  803 (935)
Q Consensus       739 ~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~---------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLK  803 (935)
                      ++++...+.+++||||+++++|.+++....               ..+++..++.|+.||+.||.|||+++  |+|||||
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlk  218 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLA  218 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCC
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCC
Confidence            999999999999999999999999996532               35899999999999999999999998  9999999


Q ss_pred             CCCeeecCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 002331          804 SPNLLVDKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMN  880 (935)
Q Consensus       804 PeNILLd~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~  880 (935)
                      |+||||+.++.+||+|||+++......  .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       219 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~  298 (382)
T 3tt0_A          219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  298 (382)
T ss_dssp             GGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999998765432  22233457789999999999999999999999999999999 999999998


Q ss_pred             hHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 PMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 ~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..++...+. ...+...+..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       299 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~ell~~  346 (382)
T 3tt0_A          299 VEELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAV---PSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            888777664 44566778889999999999999999   9999999999975


No 97 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=3.4e-43  Score=390.42  Aligned_cols=255  Identities=30%  Similarity=0.509  Sum_probs=224.2

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      .+++..++|++++.||+|+||.||+|++  +++.||||++... ........+.+|+.+|++++||||+++++++...+.
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            4677888999999999999999999988  5889999998754 344556678899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ++|||||+++|+|.+++...+..+++..++.++.||+.||+|||+++  |+||||||+||||+.++.+||+|||+++...
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~  264 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEA  264 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence            99999999999999999765567899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCC--CCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          828 NTFLSSK--STAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       828 ~~~~~~~--s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      .......  ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+. ...+...|..+++.
T Consensus       265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  343 (377)
T 3cbl_A          265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLPCPELCPDA  343 (377)
T ss_dssp             TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred             CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            4322211  1234668999999998889999999999999999998 999999998887776654 45567788889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +.+||.+||+.|   |.+||++.+|++
T Consensus       344 l~~li~~cl~~d---P~~Rps~~~i~~  367 (377)
T 3cbl_A          344 VFRLMEQCWAYE---PGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCC---chhCcCHHHHHH
Confidence            999999999999   999999999986


No 98 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4.5e-43  Score=377.42  Aligned_cols=260  Identities=27%  Similarity=0.457  Sum_probs=206.9

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECC-----ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNG-----TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT  743 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-----~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~  743 (935)
                      ..+.+..++|++++.||+|+||.||+|++..     ..||||++............+.+|+.++++++||||+++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            4456778899999999999999999997632     27999999876555566788999999999999999999999998


Q ss_pred             cCCce------EEEEeeCCCCCHHHHHcCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC
Q 002331          744 RPPNL------SIITEFLPRGSLFRILHRP-----HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN  812 (935)
Q Consensus       744 ~~~~l------~LVmEy~~gGsL~dlL~~~-----~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~  812 (935)
                      .....      ++||||+++++|.+++...     ...+++..++.|+.||+.||.|||++|  |+||||||+||||+.+
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAED  173 (323)
T ss_dssp             CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTT
T ss_pred             ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCC
Confidence            77655      9999999999999998531     225899999999999999999999999  9999999999999999


Q ss_pred             CcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 002331          813 WNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVG  889 (935)
Q Consensus       813 g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~  889 (935)
                      +.+||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  253 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI  253 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh
Confidence            9999999999986543321  1223456788999999999999999999999999999999 899999988887776664


Q ss_pred             ccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcC-------HHHHHhCcC
Q 002331          890 FQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTS-------QAQLSHKRF  934 (935)
Q Consensus       890 ~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPS-------a~EILqHPF  934 (935)
                       .......+..+++.+.+||.+||+.|   |.+||+       ++++++|+|
T Consensus       254 -~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          254 -GGNRLKQPPECMEEVYDLMYQCWSAD---PKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             -TTCCCCCCTTCCHHHHHHHHHTTCSS---GGGSCCHHHHHHHHHHHHHC--
T ss_pred             -cCCCCCCCCccCHHHHHHHHHHccCC---hhhCcCHHHHHHHHHHHHHHhh
Confidence             34456677889999999999999999   999999       777888887


No 99 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=5.5e-43  Score=389.85  Aligned_cols=249  Identities=24%  Similarity=0.359  Sum_probs=212.2

Q ss_pred             eeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEeeC
Q 002331          678 LVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEFL  755 (935)
Q Consensus       678 y~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmEy~  755 (935)
                      |...+.||+|+||.||+|++  +++.||||++....  ......+.+|+.+|++++||||+++++++...+.++|||||+
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  168 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV  168 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence            34477899999999999987  58899999987654  244567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee--cCCCcEEEEeccccccccCCcccC
Q 002331          756 PRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV--DKNWNVKVSDFGLSRLKHNTFLSS  833 (935)
Q Consensus       756 ~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL--d~~g~VKL~DFGlA~~~~~~~~~~  833 (935)
                      ++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||  +.++.+||+|||+++...... ..
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~  245 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KL  245 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-cc
Confidence            999999988765567999999999999999999999999  9999999999999  567899999999998765432 23


Q ss_pred             CCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcHHHHHHHHH
Q 002331          834 KSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDPLVARIIWE  911 (935)
Q Consensus       834 ~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~~L~dLI~q  911 (935)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......  .....+++++++||.+
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  325 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK  325 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHT
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHH
Confidence            34579999999999999999999999999999999999999999998887777664332222  1225689999999999


Q ss_pred             HHhhCCCCcCCCcCHHHHHhCcC
Q 002331          912 CWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       912 CL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||+.|   |.+||++.++|+|||
T Consensus       326 ~L~~d---p~~Rps~~e~l~hp~  345 (373)
T 2x4f_A          326 LLIKE---KSWRISASEALKHPW  345 (373)
T ss_dssp             TSCSS---GGGSCCHHHHHHSHH
T ss_pred             HcCCC---hhhCCCHHHHhcCcC
Confidence            99999   999999999999998


No 100
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1e-42  Score=371.41  Aligned_cols=257  Identities=31%  Similarity=0.513  Sum_probs=223.9

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGA  741 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~  741 (935)
                      ..+++..++|.+++.||+|+||.||+|++       .++.||||++.... .......+.+|+.+++.++||||++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   94 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGA   94 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEE
Confidence            45677889999999999999999999975       24789999987543 45566788999999999999999999999


Q ss_pred             cccCCceEEEEeeCCCCCHHHHHcCCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002331          742 VTRPPNLSIITEFLPRGSLFRILHRPH-----------------------CQVDEKRRIKMALDVARGMNCLHTSTPTIV  798 (935)
Q Consensus       742 ~~~~~~l~LVmEy~~gGsL~dlL~~~~-----------------------~~lse~~il~Ia~QIa~AL~yLHs~g~~II  798 (935)
                      +.+.+.+++||||+++++|.+++....                       ..+++..++.++.||+.||.|||+++  |+
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iv  172 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LV  172 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Cc
Confidence            999999999999999999999996532                       24889999999999999999999999  99


Q ss_pred             eeCCCCCCeeecCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 002331          799 HRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLP  875 (935)
Q Consensus       799 HrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~P  875 (935)
                      ||||||+||||+.++.+||+|||++.......  .......+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998664322  12234457788999999999889999999999999999999 9999


Q ss_pred             CCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          876 WIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       876 F~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      |.+.....+...+. .......+..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       253 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~d---p~~Rps~~~l~~~  305 (314)
T 2ivs_A          253 YPGIPPERLFNLLK-TGHRMERPDNCSEEMYRLMLQCWKQE---PDKRPVFADISKD  305 (314)
T ss_dssp             STTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHhh-cCCcCCCCccCCHHHHHHHHHHccCC---hhhCcCHHHHHHH
Confidence            99988877766554 34456677889999999999999999   9999999999875


No 101
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=4.9e-43  Score=385.93  Aligned_cols=247  Identities=22%  Similarity=0.375  Sum_probs=212.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++......      ..+|++++.++ +||||+++++++.+.+.+|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            6799999999999999999987  5789999999765432      34688888887 7999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC----CcEEEEeccccccccC
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN----WNVKVSDFGLSRLKHN  828 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~----g~VKL~DFGlA~~~~~  828 (935)
                      ||+++|+|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+|||+...    +.+||+|||+++....
T Consensus        96 E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             CCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             eCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            999999999999764 46999999999999999999999999  9999999999998432    3599999999987655


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCC---CChHHHHHHhhcccccc--CCCCcCcH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIG---MNPMQVVGAVGFQNRRL--EIPKELDP  903 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~---~~~~eil~~I~~~~~r~--~ip~~ls~  903 (935)
                      ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+   ....++...+.......  ..+..+++
T Consensus       173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  252 (342)
T 2qr7_A          173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD  252 (342)
T ss_dssp             TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCH
T ss_pred             CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCH
Confidence            43444567899999999999988889999999999999999999999986   34555666554332222  23357899


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+++||.+||+.|   |.+||++.++++|||
T Consensus       253 ~~~~li~~~L~~d---P~~R~t~~~il~hp~  280 (342)
T 2qr7_A          253 TAKDLVSKMLHVD---PHQRLTAALVLRHPW  280 (342)
T ss_dssp             HHHHHHHHHTCSS---TTTSCCHHHHTTSHH
T ss_pred             HHHHHHHHHCCCC---hhHCcCHHHHhcCCe
Confidence            9999999999999   999999999999998


No 102
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=7.1e-43  Score=400.50  Aligned_cols=250  Identities=22%  Similarity=0.301  Sum_probs=207.1

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC------
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP------  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~------  746 (935)
                      .++|++++.||+|+||+||+|.+  +++.||||++............+.+|+.+|+.++|||||+++++|....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            47899999999999999999976  5889999999876556666778899999999999999999999986553      


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+||||||+++ +|.+++..   .+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence            46999999976 57777754   4899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----------
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL-----------  895 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~-----------  895 (935)
                      ... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+....+.+           
T Consensus       215 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~  293 (464)
T 3ttj_A          215 GTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  293 (464)
T ss_dssp             --C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred             CCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence            543 23345789999999999999999999999999999999999999999988766655442211100           


Q ss_pred             ---------C---------CCCc-----------CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 ---------E---------IPKE-----------LDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ---------~---------ip~~-----------ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                               .         ++..           .++++++||.+||+.|   |.+||+++|+|+|||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d---P~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID---PAKRISVDDALQHPY  358 (464)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS---TTTSCCHHHHHTSTT
T ss_pred             hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCC---hhhCCCHHHHhcChh
Confidence                     0         0111           1567999999999999   999999999999999


No 103
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=4e-43  Score=380.82  Aligned_cols=255  Identities=25%  Similarity=0.328  Sum_probs=214.0

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++.+.||+|+||.||+|++  +++.||||++............+.+|+.++++++||||+++++++.+.+.+++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            347899999999999999999987  488999999987766666677788999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++........
T Consensus       103 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          103 FEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            9999999998887653 46999999999999999999999999  99999999999999999999999999987654434


Q ss_pred             cCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------------
Q 002331          832 SSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR----------------  894 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r----------------  894 (935)
                      ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+....+....+......                
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence            44556799999999999875 6899999999999999999999999988776655443211000                


Q ss_pred             -cC------------CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 -LE------------IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 -~~------------ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                       ..            ....+++.+.+||.+||+.|   |.+||++.+||+|||
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d---P~~Rpt~~ell~hp~  309 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID---PDKRPFCAELLHHDF  309 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS---GGGSCCGGGGGGSHH
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccC---cccCCCHHHHhcCch
Confidence             00            11357899999999999999   999999999999998


No 104
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=6.7e-43  Score=381.48  Aligned_cols=255  Identities=22%  Similarity=0.291  Sum_probs=212.8

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc-------
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR-------  744 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~-------  744 (935)
                      ..++|++++.||+|+||.||+|++  +++.||||++............+.+|+.+|+.++||||+++++++..       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            347899999999999999999987  58899999987665444445567799999999999999999999876       


Q ss_pred             -CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccc
Q 002331          745 -PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLS  823 (935)
Q Consensus       745 -~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA  823 (935)
                       .+.+++||||+++ +|.+++......+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||++
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence             3468999999975 788887776667999999999999999999999999  999999999999999999999999999


Q ss_pred             ccccCC----cccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--C
Q 002331          824 RLKHNT----FLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--E  896 (935)
Q Consensus       824 ~~~~~~----~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~  896 (935)
                      +.....    ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.........+.......  .
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            865421    122244578999999999986 457999999999999999999999999988776665543211111  1


Q ss_pred             CCCc----------------------------CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          897 IPKE----------------------------LDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       897 ip~~----------------------------ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ....                            .++.+.+||.+||+.|   |.+||+++|+|+|||
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  314 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD---PAQRIDSDDALNHDF  314 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCC---hhhCCCHHHHhCCCC
Confidence            1000                            2678999999999999   999999999999998


No 105
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=4.5e-43  Score=375.89  Aligned_cols=252  Identities=33%  Similarity=0.487  Sum_probs=212.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      +..++|++++.||+|+||+||+|.+  +++.||||++...  .......+.+|+.++++++||||+++++++.+++.+++
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   84 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF   84 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence            4457899999999999999999987  4889999987543  45667789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++......
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            99999999999999876678999999999999999999999999  9999999999999999999999999998754332


Q ss_pred             cc--------------CCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hcccccc
Q 002331          831 LS--------------SKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAV-GFQNRRL  895 (935)
Q Consensus       831 ~~--------------~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I-~~~~~r~  895 (935)
                      ..              .....||+.|+|||++.+..++.++|||||||++|+|++|..||............ .......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  242 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR  242 (310)
T ss_dssp             -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred             ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence            11              11457999999999999999999999999999999999999998764332110000 0001122


Q ss_pred             CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          896 EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       896 ~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ..+..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       243 ~~~~~~~~~l~~li~~~l~~d---P~~Rps~~~l~~  275 (310)
T 3s95_A          243 YCPPNCPPSFFPITVRCCDLD---PEKRPSFVKLEH  275 (310)
T ss_dssp             TCCTTCCTTHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHccCC---hhhCcCHHHHHH
Confidence            346778899999999999999   999999999986


No 106
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1e-42  Score=389.42  Aligned_cols=254  Identities=19%  Similarity=0.291  Sum_probs=216.0

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC--CCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR--HPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~--HPNIVkl~g~~~~~~~l~  749 (935)
                      +...+|++++.||+|+||.||++.+ .++.||||++............+.+|+.+|+.++  ||||+++++++...+.+|
T Consensus        53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~  132 (390)
T 2zmd_A           53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  132 (390)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ccCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence            3446799999999999999999976 4788999999877667777888999999999996  599999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      |||| +.+++|.+++.+. ..+++..++.|+.||+.||.|||+++  |+||||||+||||+ ++.+||+|||+++.....
T Consensus       133 lv~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          133 MVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             EEEE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             EEEe-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9999 5678999999764 37889999999999999999999999  99999999999995 589999999999876433


Q ss_pred             c--ccCCCCCCCCCccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccc
Q 002331          830 F--LSSKSTAGTPEWMAPEVLRN-----------EPSNEKCDVYSFGVILWELATLKLPWIGMN-PMQVVGAVGFQNRRL  895 (935)
Q Consensus       830 ~--~~~~s~~GT~~Y~APEvl~g-----------~~~s~ksDIWSLG~ILyELLTG~~PF~~~~-~~eil~~I~~~~~r~  895 (935)
                      .  ......+||+.|+|||++.+           ..++.++|||||||+||+|++|+.||.... ....+..+.......
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~  287 (390)
T 2zmd_A          208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  287 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred             CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence            2  12345679999999999875           368899999999999999999999998753 334444554445556


Q ss_pred             CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .++...+..+.+||.+||+.|   |.+||++.+||+|||
T Consensus       288 ~~~~~~~~~~~~li~~~L~~d---P~~Rps~~ell~hp~  323 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRD---PKQRISIPELLAHPY  323 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             CCCccchHHHHHHHHHHcccC---hhhCCCHHHHhhCcC
Confidence            677888999999999999999   999999999999998


No 107
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=4.9e-43  Score=404.32  Aligned_cols=254  Identities=25%  Similarity=0.493  Sum_probs=224.6

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      .+..++|.+++.||+|+||.||+|++  +|+.||||++....... .....+.+|+.+|+.++||||+++++++...+.+
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~   91 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI   91 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            34558899999999999999999987  58899999987543211 2345788999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |+||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.....
T Consensus        92 ~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            9999999999999999763 57999999999999999999999999  99999999999999999999999999987654


Q ss_pred             CcccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      .. .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+...+...+.  ......|..+++.+.+
T Consensus       169 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~  245 (476)
T 2y94_A          169 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC--DGIFYTPQYLNPSVIS  245 (476)
T ss_dssp             TC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH--TTCCCCCTTCCHHHHH
T ss_pred             cc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCcCCCccCCHHHHH
Confidence            32 2345689999999999998775 789999999999999999999999988887777764  3345677889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||++.+|++|||
T Consensus       246 Li~~~L~~d---P~~Rpt~~eil~hp~  269 (476)
T 2y94_A          246 LLKHMLQVD---PMKRATIKDIREHEW  269 (476)
T ss_dssp             HHHHHTCSS---TTTSCCHHHHHTCHH
T ss_pred             HHHHHcCCC---chhCcCHHHHHhCHH
Confidence            999999999   999999999999998


No 108
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-42  Score=373.44  Aligned_cols=257  Identities=27%  Similarity=0.417  Sum_probs=213.3

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeeccccc--
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTR--  744 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~--  744 (935)
                      .+....++|++.+.||+|+||.||+|++  +++.||||++......   ...+.+|+.+++++ +||||+++++++..  
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKN   94 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence            3445568999999999999999999988  7889999998765432   34678999999999 89999999999876  


Q ss_pred             ----CCceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEe
Q 002331          745 ----PPNLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSD  819 (935)
Q Consensus       745 ----~~~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~D  819 (935)
                          .+.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECC
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEee
Confidence                46789999999999999999753 346899999999999999999999999  99999999999999999999999


Q ss_pred             ccccccccCCcccCCCCCCCCCccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc
Q 002331          820 FGLSRLKHNTFLSSKSTAGTPEWMAPEVLR-----NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR  894 (935)
Q Consensus       820 FGlA~~~~~~~~~~~s~~GT~~Y~APEvl~-----g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r  894 (935)
                      ||++..............|++.|+|||++.     +..++.++|||||||++|+|++|..||.+.+.......+.....+
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  252 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP  252 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc
Confidence            999987654333334567999999999987     566889999999999999999999999998887766655444444


Q ss_pred             cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 ~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...+..++..+.+||.+||..|   |.+||++.+|++|||
T Consensus       253 ~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~hp~  289 (326)
T 2x7f_A          253 RLKSKKWSKKFQSFIESCLVKN---HSQRPATEQLMKHPF  289 (326)
T ss_dssp             CCSCSCSCHHHHHHHHHHCCSS---GGGSCCHHHHHTSHH
T ss_pred             cCCccccCHHHHHHHHHHhccC---hhhCCCHHHHhhChH
Confidence            4455678999999999999999   999999999999998


No 109
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=9.1e-43  Score=368.48  Aligned_cols=255  Identities=29%  Similarity=0.481  Sum_probs=211.1

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEEC-----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWN-----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~-----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      .+++..++|++++.||+|+||.||+|.+.     +..||||++.... .......+.+|+.++++++||||+++++++. 
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   86 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   86 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence            45677789999999999999999999763     3469999876543 4456677899999999999999999999985 


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ++..++||||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECcccccc
Confidence            46789999999999999999876667999999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCc
Q 002331          825 LKHNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELD  902 (935)
Q Consensus       825 ~~~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls  902 (935)
                      ....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+. ...+..++..++
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~  243 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCP  243 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCC
T ss_pred             ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-cCCCCCCCCCCC
Confidence            7654322 2233456788999999999999999999999999999996 999999988877776664 334566788899


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+.+||.+||+.|   |.+||++.+|+++
T Consensus       244 ~~l~~li~~~l~~~---p~~Rps~~~l~~~  270 (281)
T 1mp8_A          244 PTLYSLMTKCWAYD---PSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCC---hhhCcCHHHHHHH
Confidence            99999999999999   9999999999875


No 110
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=9.6e-43  Score=369.66  Aligned_cols=254  Identities=24%  Similarity=0.322  Sum_probs=212.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++............+.+|+.++++++||||+++++++...+.+++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   81 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence            47899999999999999999987  5889999998765443334467889999999999999999999999999999999


Q ss_pred             eeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          753 EFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      ||+. ++|.+++... ...+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++........
T Consensus        82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  158 (299)
T 2r3i_A           82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  158 (299)
T ss_dssp             ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred             Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence            9997 5999988653 346899999999999999999999999  99999999999999999999999999987654433


Q ss_pred             cCCCCCCCCCccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------c
Q 002331          832 SSKSTAGTPEWMAPEVLRNEP-SNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR----------------R  894 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~-~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~----------------r  894 (935)
                      ......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.....                .
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T 2r3i_A          159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK  238 (299)
T ss_dssp             CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence            344567899999999998765 78999999999999999999999999887666554421110                0


Q ss_pred             cCC-----------CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 LEI-----------PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 ~~i-----------p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+           ...+++++.+||.+||+.|   |.+||++.++|+|||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~~~l~hp~  286 (299)
T 2r3i_A          239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD---PNKRISAKAALAHPF  286 (299)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSS---TTTSCCHHHHHTSGG
T ss_pred             hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcC---cccCCCHHHHhcChh
Confidence            111           1247889999999999999   999999999999998


No 111
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=6e-43  Score=367.07  Aligned_cols=254  Identities=26%  Similarity=0.478  Sum_probs=214.0

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      .+..++|++++.||+|+||.||+|++  +++.||||++...... ......+.+|+.+++.++||||+++++++...+.+
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF   86 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence            34568999999999999999999987  5889999998654321 12345688999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++.....
T Consensus        87 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           87 FMVMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             EEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             EEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            9999999999999999653 46899999999999999999999999  99999999999999999999999999987654


Q ss_pred             CcccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVAR  907 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~d  907 (935)
                      .. ......|++.|+|||++.+..+ +.++||||||+++|+|++|+.||...........+.  .....+|..++..+.+
T Consensus       164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR--GGVFYIPEYLNRSVAT  240 (276)
T ss_dssp             --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred             Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh--cCcccCchhcCHHHHH
Confidence            32 2234578999999999988765 689999999999999999999999988877776663  3345567889999999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||++.+|++|||
T Consensus       241 li~~~l~~~---p~~Rps~~~~l~h~~  264 (276)
T 2h6d_A          241 LLMHMLQVD---PLKRATIKDIREHEW  264 (276)
T ss_dssp             HHHHHTCSS---GGGSCCHHHHHHSHH
T ss_pred             HHHHHccCC---hhhCCCHHHHHhChh
Confidence            999999999   999999999999998


No 112
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=8.1e-43  Score=370.73  Aligned_cols=251  Identities=24%  Similarity=0.428  Sum_probs=211.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|.+.+.||+|+||.||++++  .+..||||++...... .....+.+|+++|++++||||+++++++.+...+++|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            5799999999999999999987  5789999998765422 235678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEecccccccc
Q 002331          754 FLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       754 y~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~  827 (935)
                      |+++++|.+++..   ....+++..++.|+.||+.||.|||++|  |+||||||+||||   +.++.+||+|||++....
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999998853   2357999999999999999999999999  9999999999999   456889999999998655


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC-CCcCcHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEI-PKELDPLVA  906 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~i-p~~ls~~L~  906 (935)
                      .. .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+......... ...+++.+.
T Consensus       179 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (285)
T 3is5_A          179 SD-EHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV  256 (285)
T ss_dssp             ---------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHH
T ss_pred             Cc-ccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHH
Confidence            43 22345678999999999864 5789999999999999999999999999888777665433333222 234789999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||.+||+.|   |.+||++.+||+|||
T Consensus       257 ~li~~~L~~d---P~~Rps~~e~l~hp~  281 (285)
T 3is5_A          257 DLLKQMLTKD---PERRPSAAQVLHHEW  281 (285)
T ss_dssp             HHHHHHTCSC---TTTSCCHHHHHTSGG
T ss_pred             HHHHHHccCC---hhhCcCHHHHhcCHH
Confidence            9999999999   999999999999998


No 113
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.2e-42  Score=370.74  Aligned_cols=258  Identities=28%  Similarity=0.411  Sum_probs=222.2

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeec
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMG  740 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g  740 (935)
                      ..+++..++|++++.||+|+||.||+|++       .++.||||++.... .......+.+|+.+++++ +||||+++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            34678889999999999999999999975       35789999987553 334567789999999999 9999999999


Q ss_pred             ccccCCceEEEEeeCCCCCHHHHHcCCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCC
Q 002331          741 AVTRPPNLSIITEFLPRGSLFRILHRPHC-----------------QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLK  803 (935)
Q Consensus       741 ~~~~~~~l~LVmEy~~gGsL~dlL~~~~~-----------------~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLK  803 (935)
                      ++...+..++||||+++++|.+++.....                 .+++..++.++.||+.||.|||+++  |+|||||
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlk  172 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLA  172 (313)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCc
Confidence            99999999999999999999999975432                 4899999999999999999999999  9999999


Q ss_pred             CCCeeecCCCcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 002331          804 SPNLLVDKNWNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMN  880 (935)
Q Consensus       804 PeNILLd~~g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~  880 (935)
                      |+||||+.++.+||+|||++........  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            9999999999999999999987654321  1233456788999999999999999999999999999998 999999876


Q ss_pred             hHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 PMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 ~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .............+...+..++..+.+||.+||+.|   |.+||++.+|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~~  301 (313)
T 1t46_A          253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD---PLKRPTFKQIVQL  301 (313)
T ss_dssp             SSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             chhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCC---chhCcCHHHHHHH
Confidence            655444443344555667889999999999999999   9999999999875


No 114
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=370.50  Aligned_cols=253  Identities=28%  Similarity=0.450  Sum_probs=215.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ...++|++.+.||+|+||.||+|.+  +++.||||++.....    ...+.+|+.+++.++||||+++++++...+.+++
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            4567899999999999999999987  488999999876542    3467889999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.......
T Consensus       102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            99999999999999754567999999999999999999999999  9999999999999999999999999998766544


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCcCcHHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQ-NRRLEIPKELDPLVARII  909 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~-~~r~~ip~~ls~~L~dLI  909 (935)
                      .......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+... ......+..++..+.+||
T Consensus       180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  259 (314)
T 3com_A          180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV  259 (314)
T ss_dssp             SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred             cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHH
Confidence            4445567999999999999999999999999999999999999999988876665544322 122334567899999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||..|   |.+||++.++++|||
T Consensus       260 ~~~l~~d---p~~Rpt~~~ll~~~~  281 (314)
T 3com_A          260 KQCLVKS---PEQRATATQLLQHPF  281 (314)
T ss_dssp             HHHTCSC---TTTSCCHHHHTTSHH
T ss_pred             HHHccCC---hhhCcCHHHHHhCHH
Confidence            9999999   999999999999998


No 115
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=8.1e-43  Score=401.03  Aligned_cols=251  Identities=29%  Similarity=0.413  Sum_probs=214.6

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++++.||+|+||+||+|++  .+..||||++............+.+|+.+|+.++|||||+++++|.+...+|+|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4799999999999999999987  57889999998765444445678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||++|+|.+++.+. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.   ++.+||+|||++.......
T Consensus       117 ~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          117 CYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            99999999988653 46899999999999999999999999  999999999999975   4559999999998765442


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dL  908 (935)
                       .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....++...+.........+  ..+++.+++|
T Consensus       194 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  271 (494)
T 3lij_A          194 -KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL  271 (494)
T ss_dssp             -CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHH
T ss_pred             -cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHH
Confidence             3345679999999999874 58999999999999999999999999999988888775444433322  4689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       272 i~~~L~~d---p~~R~s~~e~l~hp~  294 (494)
T 3lij_A          272 IKQMLQFD---SQRRISAQQALEHPW  294 (494)
T ss_dssp             HHHHTCSS---TTTSCCHHHHHTCHH
T ss_pred             HHHHCCCC---hhhCccHHHHhcCcc
Confidence            99999999   999999999999998


No 116
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.4e-42  Score=394.25  Aligned_cols=252  Identities=25%  Similarity=0.284  Sum_probs=193.9

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc-----cCCce
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT-----RPPNL  748 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~-----~~~~l  748 (935)
                      ++|++++.||+|+||+||+|.+  +++.||||++............+.+|+.+|+.++|||||++++++.     ....+
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            6899999999999999999976  5889999999776556666778999999999999999999999984     33569


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |+||||+. ++|.+++... ..+++..++.|+.||+.||.|||++|  ||||||||+||||+.++.+||+|||+++....
T Consensus       133 ~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             EEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             EEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            99999984 6999999764 46999999999999999999999999  99999999999999999999999999987542


Q ss_pred             Cc---------------------------ccCCCCCCCCCccCcccc-cCCCCCchhHHHHHHHHHHHHHc---------
Q 002331          829 TF---------------------------LSSKSTAGTPEWMAPEVL-RNEPSNEKCDVYSFGVILWELAT---------  871 (935)
Q Consensus       829 ~~---------------------------~~~~s~~GT~~Y~APEvl-~g~~~s~ksDIWSLG~ILyELLT---------  871 (935)
                      ..                           ......+||+.|+|||++ .+..++.++||||||||||||++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            21                           112345789999999986 56679999999999999999999         


Q ss_pred             --CCCCCCCCCh--------------------HHHHHHhhc------------------------ccc-----ccCCCCc
Q 002331          872 --LKLPWIGMNP--------------------MQVVGAVGF------------------------QNR-----RLEIPKE  900 (935)
Q Consensus       872 --G~~PF~~~~~--------------------~eil~~I~~------------------------~~~-----r~~ip~~  900 (935)
                        |+++|.+...                    ...+..+..                        ...     .......
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              6777766431                    111111100                        000     0011234


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +++++.+||.+||..|   |.+||+++|+|+|||
T Consensus       369 ~s~~~~dLl~~mL~~d---P~~R~t~~e~L~Hp~  399 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFN---PNKRITINECLAHPF  399 (458)
T ss_dssp             SCHHHHHHHHHHSCSS---TTTSCCHHHHHHSGG
T ss_pred             CCHHHHHHHHHHhccC---ccccCCHHHHhcCHh
Confidence            6899999999999999   999999999999998


No 117
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=4.7e-43  Score=401.79  Aligned_cols=251  Identities=28%  Similarity=0.462  Sum_probs=218.5

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||+||+|++  +++.||||++............+.+|+.+|++++|||||++++++.+...+|+|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            5799999999999999999987  58899999987543322335678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec---CCCcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD---KNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd---~~g~VKL~DFGlA~~~~~~~  830 (935)
                      |+.+++|.+++.+. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+   .++.+||+|||+++......
T Consensus       102 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          102 LYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            99999999988653 46899999999999999999999999  99999999999995   56679999999998765432


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dL  908 (935)
                       .....+||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.+..++...+.........+  ..+++.+++|
T Consensus       179 -~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  256 (486)
T 3mwu_A          179 -KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL  256 (486)
T ss_dssp             ----CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred             -ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence             23456799999999999874 8999999999999999999999999999988888776554444433  4689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       257 i~~~L~~d---p~~R~t~~~~l~hp~  279 (486)
T 3mwu_A          257 IRKMLTFH---PSLRITATQCLEHPW  279 (486)
T ss_dssp             HHHHTCSS---TTTSCCHHHHHHCHH
T ss_pred             HHHHcCCC---hhhCcCHHHHhcCHh
Confidence            99999999   999999999999998


No 118
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-42  Score=384.20  Aligned_cols=249  Identities=23%  Similarity=0.343  Sum_probs=209.5

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC------
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP------  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~------  746 (935)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++............+.+|+.+|+.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            36899999999999999999987  5889999998766556666778899999999999999999999987653      


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+|+||||+ +++|.+++..  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            469999999 7899999976  46899999999999999999999999  999999999999999999999999999875


Q ss_pred             cCCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR------------  893 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~------------  893 (935)
                      ...   .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....            
T Consensus       179 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~  255 (367)
T 1cm8_A          179 DSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS  255 (367)
T ss_dssp             CSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred             ccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence            432   334678999999999987 6789999999999999999999999999887665544321110            


Q ss_pred             -----------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 -----------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 -----------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                       ...+...+++.+.+||.+||+.|   |.+||+++++|+|||
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~d---P~~R~t~~e~l~hp~  310 (367)
T 1cm8_A          256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD---AEQRVTAGEALAHPY  310 (367)
T ss_dssp             HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS---TTTSCCHHHHHHSGG
T ss_pred             HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCC---hhHCCCHHHHhcChH
Confidence                             01233567899999999999999   999999999999998


No 119
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=6.4e-43  Score=418.78  Aligned_cols=257  Identities=20%  Similarity=0.338  Sum_probs=225.7

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHc-CCCceeeeecccccC
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRP  745 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~  745 (935)
                      ...+..++|++++.||+|+||.||+|++  +++.||||++..... .......+..|..+|..+ +||||++++++|.+.
T Consensus       335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~  414 (674)
T 3pfq_A          335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM  414 (674)
T ss_dssp             -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred             cccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC
Confidence            3456678999999999999999999987  567899999875421 112345677899999987 799999999999999


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      +.+||||||+++|+|.+++.+. ..+++..++.|+.||+.||.|||+++  ||||||||+||||+.+|++||+|||+++.
T Consensus       415 ~~~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          415 DRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             CEEEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeec
Confidence            9999999999999999999764 46999999999999999999999999  99999999999999999999999999986


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHH
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                      ...........+||+.|+|||++.+..++.++|||||||+||||++|+.||.+.+..++...+.  .....+|..+++++
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~  569 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEA  569 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--SSCCCCCTTSCHHH
T ss_pred             cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHH
Confidence            5444444566789999999999999999999999999999999999999999999988888875  34567888999999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCH-----HHHHhCcC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQ-----AQLSHKRF  934 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa-----~EILqHPF  934 (935)
                      .+||.+||+.|   |.+||++     ++|++|||
T Consensus       570 ~~li~~lL~~d---P~~R~~~~~~~~~ei~~h~f  600 (674)
T 3pfq_A          570 VAICKGLMTKH---PGKRLGCGPEGERDIKEHAF  600 (674)
T ss_dssp             HHHHHHHSCSS---STTCTTCSTTHHHHHHSSGG
T ss_pred             HHHHHHHccCC---HHHCCCCCCCcHHHHhcCcc
Confidence            99999999999   9999997     99999998


No 120
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.6e-42  Score=376.59  Aligned_cols=253  Identities=23%  Similarity=0.355  Sum_probs=216.3

Q ss_pred             CCeeEE-EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEE
Q 002331          676 EDLVLG-ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       676 edy~I~-e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ++|.+. +.||+|+||.||+|.+  +++.||||++............+.+|+.+++.+ .||||+++++++.+.+.+++|
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI  107 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence            467776 8999999999999987  488999999987655444456788999999999 569999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEecccccccc
Q 002331          752 TEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLSRLKH  827 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA~~~~  827 (935)
                      |||+++++|.+++... ...+++..++.|+.||+.||.|||++|  |+||||||+||||+.   ++.+||+|||+++...
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~  185 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG  185 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence            9999999999998643 457899999999999999999999999  999999999999987   7899999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc--cccCCCCcCcHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN--RRLEIPKELDPLV  905 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~--~r~~ip~~ls~~L  905 (935)
                      ... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+....  ........+++.+
T Consensus       186 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  264 (327)
T 3lm5_A          186 HAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA  264 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             Ccc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHH
Confidence            432 2334679999999999999999999999999999999999999999988877766554322  2233446789999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||.+||+.|   |.+||++++||+|||
T Consensus       265 ~~li~~~L~~d---P~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          265 TDFIQSLLVKN---PEKRPTAEICLSHSW  290 (327)
T ss_dssp             HHHHHHHSCSS---GGGSCCHHHHTTCGG
T ss_pred             HHHHHHHcCCC---hhhCcCHHHHhCCHh
Confidence            99999999999   999999999999998


No 121
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=5.7e-43  Score=371.93  Aligned_cols=254  Identities=29%  Similarity=0.462  Sum_probs=214.3

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ..++|++.+.||+|+||.||+|++  +++.||+|++.....  .....+.+|+.+++.++||||+++++++...+.+++|
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   94 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM   94 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence            347899999999999999999988  478899999865432  2345788999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||+++++|.+++.+....+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++........
T Consensus        95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ  172 (302)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence            9999999999998765567999999999999999999999998  99999999999999999999999999765433222


Q ss_pred             cCCCCCCCCCccCcccc-----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCcCcHHH
Q 002331          832 SSKSTAGTPEWMAPEVL-----RNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR-RLEIPKELDPLV  905 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl-----~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~-r~~ip~~ls~~L  905 (935)
                      ......|++.|+|||++     .+..++.++|||||||++|+|++|..||...+.......+..... ....+..++..+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  252 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF  252 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred             ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHH
Confidence            23446789999999998     466788999999999999999999999999888776665543222 223456789999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||.+||+.|   |.+||++.+|++|||
T Consensus       253 ~~li~~~l~~d---p~~Rps~~~ll~h~~  278 (302)
T 2j7t_A          253 RDFLKIALDKN---PETRPSAAQLLEHPF  278 (302)
T ss_dssp             HHHHHHHSCSC---TTTSCCHHHHTTSTT
T ss_pred             HHHHHHHcccC---hhhCCCHHHHhcChH
Confidence            99999999999   999999999999999


No 122
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=3.1e-42  Score=364.33  Aligned_cols=252  Identities=31%  Similarity=0.555  Sum_probs=215.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHH--HH---HHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGA--AL---LEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~--~~---~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      +..++|++.+.||+|+||.||+|++  +++.||||++........  ..   ..+.+|+.++++++||||+++++++.+.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            4568999999999999999999987  688999999876543221  11   5788999999999999999999999765


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc-----EEEEec
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN-----VKVSDF  820 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~-----VKL~DF  820 (935)
                      .  ++||||+++++|.+++.+....+++..++.++.||+.||.|||+++.+|+||||||+||||+.++.     +||+||
T Consensus        96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            5  799999999999999877777899999999999999999999998767999999999999988776     999999


Q ss_pred             cccccccCCcccCCCCCCCCCccCccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHhhccccccC
Q 002331          821 GLSRLKHNTFLSSKSTAGTPEWMAPEVLR--NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQV--VGAVGFQNRRLE  896 (935)
Q Consensus       821 GlA~~~~~~~~~~~s~~GT~~Y~APEvl~--g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~ei--l~~I~~~~~r~~  896 (935)
                      |+++.....   .....||+.|+|||++.  +..++.++|||||||++|+|++|+.||........  ...+.....+..
T Consensus       174 g~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 4f0f_A          174 GLSQQSVHS---VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT  250 (287)
T ss_dssp             TTCBCCSSC---EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred             Ccccccccc---ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence            999855432   23467999999999994  45578999999999999999999999987654433  444444566677


Q ss_pred             CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          897 IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       897 ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ++..+++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       251 ~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~~  283 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGD---PKKRPHFSYIVKE  283 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCC---hhhCcCHHHHHHH
Confidence            88899999999999999999   9999999999863


No 123
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.3e-42  Score=365.90  Aligned_cols=252  Identities=26%  Similarity=0.420  Sum_probs=215.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHcCCCceeeeecccccCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~  749 (935)
                      ++|++.+.||+|+||.||+|++  +++.||||++.......    .....+.+|+.++++++||||+++++++.+...++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            5699999999999999999987  48899999987654322    13567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC----cEEEEecccccc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW----NVKVSDFGLSRL  825 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g----~VKL~DFGlA~~  825 (935)
                      +||||+++++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+|||++.++    .+||+|||++..
T Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            999999999999999653 46899999999999999999999998  99999999999998777    899999999987


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCcH
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELDP  903 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls~  903 (935)
                      ..... ......|++.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+.......  ..+..+++
T Consensus       162 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T 3bhy_A          162 IEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE  240 (283)
T ss_dssp             CC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred             ccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCH
Confidence            65432 2234578999999999999999999999999999999999999999988877776654322211  22356789


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||++.++++|||
T Consensus       241 ~~~~li~~~l~~d---p~~Rps~~~~l~h~~  268 (283)
T 3bhy_A          241 LAKDFIRRLLVKD---PKRRMTIAQSLEHSW  268 (283)
T ss_dssp             HHHHHHHTTSCSS---GGGSCCHHHHHHCHH
T ss_pred             HHHHHHHHHccCC---HhHCcCHHHHHhCHH
Confidence            9999999999999   999999999999998


No 124
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=6.5e-43  Score=380.70  Aligned_cols=240  Identities=22%  Similarity=0.366  Sum_probs=187.7

Q ss_pred             EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeecccccCCceEEEEeeCCCC
Q 002331          682 ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTRPPNLSIITEFLPRG  758 (935)
Q Consensus       682 e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~~~~l~LVmEy~~gG  758 (935)
                      +.||+|+||.||+|.+  +++.||||++....     ...+.+|+.+++.+. ||||+++++++.+....|+||||++++
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhh-----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            6799999999999987  57899999986542     346778999999996 999999999999999999999999999


Q ss_pred             CHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC---cEEEEeccccccccCCcccCCC
Q 002331          759 SLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW---NVKVSDFGLSRLKHNTFLSSKS  835 (935)
Q Consensus       759 sL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g---~VKL~DFGlA~~~~~~~~~~~s  835 (935)
                      +|.+++.+. ..+++..++.|+.||+.||.|||+++  |+||||||+||||+.++   .+||+|||+++...........
T Consensus        92 ~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  168 (325)
T 3kn6_A           92 ELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT  168 (325)
T ss_dssp             BHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc
Confidence            999999764 47999999999999999999999999  99999999999997665   8999999999876554444455


Q ss_pred             CCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HHHHHHhhccccccCCC----CcCcHH
Q 002331          836 TAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP-------MQVVGAVGFQNRRLEIP----KELDPL  904 (935)
Q Consensus       836 ~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-------~eil~~I~~~~~r~~ip----~~ls~~  904 (935)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.       .++...+..  ....++    ..++++
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~  246 (325)
T 3kn6_A          169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--GDFSFEGEAWKNVSQE  246 (325)
T ss_dssp             ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT--TCCCCCSHHHHTSCHH
T ss_pred             cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc--CCCCCCcccccCCCHH
Confidence            6789999999999999999999999999999999999999987543       444555432  222222    357899


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +++||.+||+.|   |.+||++.++++|||
T Consensus       247 ~~~li~~~L~~d---P~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          247 AKDLIQGLLTVD---PNKRLKMSGLRYNEW  273 (325)
T ss_dssp             HHHHHHHHHCCC---TTTCCCTTTSTTCGG
T ss_pred             HHHHHHHHCCCC---hhHCCCHHHHhcChh
Confidence            999999999999   999999999999999


No 125
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=6.3e-43  Score=387.41  Aligned_cols=256  Identities=27%  Similarity=0.424  Sum_probs=221.4

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ++..++|++++.||+|+||.||+|++       .++.||||++... ........+.+|+.++++++|||||++++++.+
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            45678999999999999999999985       3557999998643 344556678899999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC---cE
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPH------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW---NV  815 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g---~V  815 (935)
                      ....++||||+++|+|.+++....      ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++   .+
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceE
Confidence            999999999999999999996422      45899999999999999999999999  99999999999999555   59


Q ss_pred             EEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 002331          816 KVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQN  892 (935)
Q Consensus       816 KL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~  892 (935)
                      ||+|||+++......  .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+....++...+. ..
T Consensus       224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~-~~  302 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG  302 (367)
T ss_dssp             EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred             EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cC
Confidence            999999998643221  22233567899999999999999999999999999999998 999999999888877765 44


Q ss_pred             cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+...+..+++.+.+||.+||+.|   |.+||++.+|+++.+
T Consensus       303 ~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~eil~~l~  341 (367)
T 3l9p_A          303 GRMDPPKNCPGPVYRIMTQCWQHQ---PEDRPNFAIILERIE  341 (367)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCC---HhHCcCHHHHHHHHH
Confidence            456678889999999999999999   999999999998754


No 126
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=4.9e-43  Score=400.58  Aligned_cols=252  Identities=29%  Similarity=0.427  Sum_probs=221.7

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++...... ......+.+|+.+|++++||||+++++++.+.+.+|+|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            36799999999999999999987  6889999999765432 23456788999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccC
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~  828 (935)
                      |||+.+++|.+++... ..+++..++.|+.||+.||.|||++|  |+||||||+||||   +.++.+||+|||+++....
T Consensus       105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            9999999999998764 46999999999999999999999999  9999999999999   5678999999999986654


Q ss_pred             CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHH
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVA  906 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~  906 (935)
                      .. ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..++...+.........+  ..+++.++
T Consensus       182 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  259 (484)
T 3nyv_A          182 SK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK  259 (484)
T ss_dssp             CC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHH
T ss_pred             cc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHH
Confidence            32 2234579999999999987 58999999999999999999999999999988888876554444433  46899999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +||.+||+.|   |.+||++.++|+|||
T Consensus       260 ~li~~~L~~d---p~~R~s~~e~l~h~~  284 (484)
T 3nyv_A          260 DLIRKMLTYV---PSMRISARDALDHEW  284 (484)
T ss_dssp             HHHHHHTCSS---GGGSCCHHHHHTSHH
T ss_pred             HHHHHHCCCC---hhHCcCHHHHhhChh
Confidence            9999999999   999999999999998


No 127
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-42  Score=365.30  Aligned_cols=256  Identities=25%  Similarity=0.442  Sum_probs=222.8

Q ss_pred             cCCCCCCeeEEE-EeeecCcEEEEEEEE----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          671 CEIPWEDLVLGE-RIGLGSYGEVYHADW----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       671 ~ei~~edy~I~e-~LG~G~fG~Vyka~~----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      +.+..++|.+.+ .||+|+||.||+|.+    .+..||||++.... .......+.+|+.++++++||||+++++++ ..
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~   81 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QA   81 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ES
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cC
Confidence            456667888877 999999999999975    56789999987653 445677889999999999999999999999 45


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      +.+++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++..
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~  159 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKA  159 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceee
Confidence            6799999999999999999876677999999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcC
Q 002331          826 KHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       826 ~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~l  901 (935)
                      ......   ......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||......++...+. ...+..++..+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~  238 (287)
T 1u59_A          160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPEC  238 (287)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCCCCCTTC
T ss_pred             eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-cCCcCCCCCCc
Confidence            643211   1223456889999999998889999999999999999998 999999988877776664 34556778899


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ++.+.+||.+||+.|   |.+||++.+|+++.+
T Consensus       239 ~~~l~~li~~~l~~~---p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          239 PPELYALMSDCWIYK---WEDRPDFLTVEQRMR  268 (287)
T ss_dssp             CHHHHHHHHHTTCSS---GGGSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCC---hhhCcCHHHHHHHHH
Confidence            999999999999999   999999999998754


No 128
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=3.5e-42  Score=366.03  Aligned_cols=257  Identities=35%  Similarity=0.604  Sum_probs=207.7

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      ...++..++|++.+.||+|+||.||+|++.+ .||||++............+.+|+.+|++++||||+++++++ ....+
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~   94 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL   94 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence            3467888999999999999999999998765 599999987776777778899999999999999999999965 45678


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++.....
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccc
Confidence            9999999999999999877778999999999999999999999999  99999999999999999999999999976542


Q ss_pred             C--cccCCCCCCCCCccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH-Hhhccccc---cCCCC
Q 002331          829 T--FLSSKSTAGTPEWMAPEVLR---NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVG-AVGFQNRR---LEIPK  899 (935)
Q Consensus       829 ~--~~~~~s~~GT~~Y~APEvl~---g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~-~I~~~~~r---~~ip~  899 (935)
                      .  ........||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+........ .+......   ..+..
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS  252 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence            1  12223457899999999987   5668889999999999999999999998865544433 33222222   23445


Q ss_pred             cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          900 ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       900 ~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       253 ~~~~~l~~li~~~l~~~---p~~Rps~~ell~~  282 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKK---RDERPSFPRILAE  282 (289)
T ss_dssp             TSCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCC---hhhCCCHHHHHHH
Confidence            78999999999999999   9999999999863


No 129
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=2.7e-42  Score=361.50  Aligned_cols=252  Identities=27%  Similarity=0.348  Sum_probs=214.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++...... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            5799999999999999999987  5889999998765432 345678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc--c
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF--L  831 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~--~  831 (935)
                      |+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.......  .
T Consensus        86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            99999999999763 46899999999999999999999999  9999999999999999999999999998654221  2


Q ss_pred             cCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCcCcHHHHHHH
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPM-QVVGAVGFQNRRLEIPKELDPLVARII  909 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~-eil~~I~~~~~r~~ip~~ls~~L~dLI  909 (935)
                      ......|++.|+|||++.+..+ +.++|||||||++|+|++|..||...... .....+............+++.+.+||
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHH
Confidence            2344678999999999988765 77999999999999999999999876543 222222222222233356899999999


Q ss_pred             HHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          910 WECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       910 ~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||+.|   |.+||++.+|++|||
T Consensus       243 ~~~l~~~---p~~Rps~~~il~~~~  264 (276)
T 2yex_A          243 HKILVEN---PSARITIPDIKKDRW  264 (276)
T ss_dssp             HHHSCSS---TTTSCCHHHHTTCTT
T ss_pred             HHHCCCC---chhCCCHHHHhcCcc
Confidence            9999999   999999999999998


No 130
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=5.6e-42  Score=363.63  Aligned_cols=253  Identities=24%  Similarity=0.355  Sum_probs=219.0

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC---C----HHHHHHHHHHHHHHHHcC-CCceeeeeccccc
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF---S----GAALLEFKREVKIMRRLR-HPNVVLFMGAVTR  744 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~---~----~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~  744 (935)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.....   .    ......+.+|+.+++++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            47899999999999999999987  578999999876531   1    123456789999999995 9999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ...+++||||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchh
Confidence            99999999999999999999753 46899999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCccccc------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLR------NEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP  898 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~------g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip  898 (935)
                      ..... .......|++.|+|||++.      ...++.++|||||||++|+|++|..||...+.......+.........+
T Consensus       173 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (298)
T 1phk_A          173 QLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP  251 (298)
T ss_dssp             ECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             hcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc
Confidence            76543 2234467899999999985      4567899999999999999999999999988877776664433333322


Q ss_pred             --CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 --KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 --~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                        ..++..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       252 ~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~h~~  286 (298)
T 1phk_A          252 EWDDYSDTVKDLVSRFLVVQ---PQKRYTAEEALAHPF  286 (298)
T ss_dssp             TGGGSCHHHHHHHHHHCCSS---GGGSCCHHHHTTSGG
T ss_pred             cccccCHHHHHHHHHHccCC---cccCCCHHHHHhChH
Confidence              468899999999999999   999999999999998


No 131
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.6e-42  Score=379.69  Aligned_cols=256  Identities=24%  Similarity=0.315  Sum_probs=217.7

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..++..++|++.+.||+|+||.||+|++.  ++.||+|++.... .......+.+|+.+++.++||||+++++++...+.
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  105 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE  105 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE
Confidence            34566789999999999999999999884  8899999987653 45566788999999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      +++||||+++++|.+++.+. ..+++..++.++.||+.||.|||.. |  |+||||||+||||+.++.+||+|||++...
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EEEEEECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            99999999999999999763 3689999999999999999999985 8  999999999999999999999999999765


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh------------------
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAV------------------  888 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I------------------  888 (935)
                      ...  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+                  
T Consensus       183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (360)
T 3eqc_A          183 IDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP  260 (360)
T ss_dssp             HHH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred             ccc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence            432  223467999999999999999999999999999999999999999887665433221                  


Q ss_pred             ------------------------hccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          889 ------------------------GFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       889 ------------------------~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                              .........+..++.++.+||.+||+.|   |.+||+++++|+|||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  327 (360)
T 3eqc_A          261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN---PAERADLKQLMVHAF  327 (360)
T ss_dssp             -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSS---TTTSCCHHHHHTSHH
T ss_pred             CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcC---hhhCCCHHHHhhChH
Confidence                                    1111111122457899999999999999   999999999999998


No 132
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.7e-42  Score=389.30  Aligned_cols=246  Identities=24%  Similarity=0.365  Sum_probs=199.1

Q ss_pred             CCeeEE-EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHH-cCCCceeeeeccccc----CCc
Q 002331          676 EDLVLG-ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRR-LRHPNVVLFMGAVTR----PPN  747 (935)
Q Consensus       676 edy~I~-e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~-L~HPNIVkl~g~~~~----~~~  747 (935)
                      ++|.+. +.||+|+||+||++.+  +++.||||++...       ..+.+|+.++.+ ++||||++++++|..    ...
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            567776 7899999999999987  5788999998643       245678888754 489999999998865    567


Q ss_pred             eEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEecccc
Q 002331          748 LSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLS  823 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA  823 (935)
                      +|||||||++|+|.+++.... ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.   ++.+||+|||++
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccc
Confidence            899999999999999997643 46999999999999999999999999  999999999999987   789999999999


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhhccccccC--C
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ----VVGAVGFQNRRLE--I  897 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e----il~~I~~~~~r~~--i  897 (935)
                      +..... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...    ....+........  .
T Consensus       212 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  290 (400)
T 1nxk_A          212 KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  290 (400)
T ss_dssp             EECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT
T ss_pred             cccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcc
Confidence            865433 22345688999999999999999999999999999999999999998764322    2223322222222  2


Q ss_pred             CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          898 PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       898 p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...+++++.+||.+||+.|   |.+||++.+|++|||
T Consensus       291 ~~~~s~~~~~li~~~L~~d---P~~Rpt~~eil~hp~  324 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLKTE---PTQRMTITEFMNHPW  324 (400)
T ss_dssp             TTTSCHHHHHHHHTTSCSS---GGGSCCHHHHHHSHH
T ss_pred             cccCCHHHHHHHHHHCCCC---hhHCcCHHHHhcCcc
Confidence            2568999999999999999   999999999999998


No 133
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1e-41  Score=385.93  Aligned_cols=253  Identities=24%  Similarity=0.296  Sum_probs=204.4

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC-----Cc
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP-----PN  747 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~-----~~  747 (935)
                      .++|++++.||+|+||.||+|.+  +++.||||++............+.+|+.+|+.++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            47899999999999999999987  578899999987655566677899999999999999999999998766     56


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|+||||++ ++|.+++... ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence            999999996 5999999764 46999999999999999999999999  9999999999999999999999999998764


Q ss_pred             CCcc----------------------cCCCCCCCCCccCcccc-cCCCCCchhHHHHHHHHHHHHHcC-----------C
Q 002331          828 NTFL----------------------SSKSTAGTPEWMAPEVL-RNEPSNEKCDVYSFGVILWELATL-----------K  873 (935)
Q Consensus       828 ~~~~----------------------~~~s~~GT~~Y~APEvl-~g~~~s~ksDIWSLG~ILyELLTG-----------~  873 (935)
                      ....                      .....+||++|+|||++ .+..++.++|||||||++|||++|           .
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~  260 (432)
T 3n9x_A          181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF  260 (432)
T ss_dssp             ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCC
T ss_pred             ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccc
Confidence            3211                      12456899999999986 566699999999999999999984           4


Q ss_pred             CCCCCCCh-----------------HHHH------------------------HHhhccccccCC-----CCcCcHHHHH
Q 002331          874 LPWIGMNP-----------------MQVV------------------------GAVGFQNRRLEI-----PKELDPLVAR  907 (935)
Q Consensus       874 ~PF~~~~~-----------------~eil------------------------~~I~~~~~r~~i-----p~~ls~~L~d  907 (935)
                      ++|.+.+.                 ...+                        ..+.........     ...+++.+.+
T Consensus       261 p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  340 (432)
T 3n9x_A          261 PLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN  340 (432)
T ss_dssp             CSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             ccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHH
Confidence            44444321                 1111                        111100111111     1457899999


Q ss_pred             HHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          908 IIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       908 LI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ||.+||+.|   |.+||+++|+|+|||
T Consensus       341 Ll~~mL~~d---P~~R~ta~e~L~Hp~  364 (432)
T 3n9x_A          341 LLESMLKFN---PNKRITIDQALDHPY  364 (432)
T ss_dssp             HHHHHSCSS---TTTSCCHHHHHTCGG
T ss_pred             HHHHHhcCC---cccCCCHHHHhcChh
Confidence            999999999   999999999999998


No 134
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.3e-42  Score=369.92  Aligned_cols=251  Identities=22%  Similarity=0.357  Sum_probs=210.7

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|++.+.||+|+||.||+|++  .++.||||++..... .......+.+|+.++++++||||+++++++.+.+.+|+
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            347899999999999999999986  578999999866433 44566789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++......
T Consensus        89 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            99999999999999764 46899999999999999999999999  9999999999999999999999999998765432


Q ss_pred             -ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---cCCCCcCcHHHH
Q 002331          831 -LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR---LEIPKELDPLVA  906 (935)
Q Consensus       831 -~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r---~~ip~~ls~~L~  906 (935)
                       .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.............+   ..++..+++.+.
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  245 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS  245 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHH
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHH
Confidence             2233457999999999999999999999999999999999999999998877665444322211   234567899999


Q ss_pred             HHHHHHHhhCCCCcCCCc-CHHHHH
Q 002331          907 RIIWECWQTGWSSLHIRT-SQAQLS  930 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRP-Sa~EIL  930 (935)
                      ++|.+||..|   |.+|| ++++++
T Consensus       246 ~li~~~l~~d---p~~R~~~~~~l~  267 (294)
T 4eqm_A          246 NVILRATEKD---KANRYKTIQEMK  267 (294)
T ss_dssp             HHHHHHSCSS---GGGSCSSHHHHH
T ss_pred             HHHHHHhcCC---HhHccccHHHHH
Confidence            9999999999   99999 555544


No 135
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.1e-42  Score=405.30  Aligned_cols=256  Identities=23%  Similarity=0.325  Sum_probs=222.6

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-HHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-AALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      .+..++|.+.+.||+|+||.||+|++  +|+.||||++....... .....+.+|+.+|+.++||||++++++|.+...+
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence            35568899999999999999999987  58899999987543211 2245678999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          749 SIITEFLPRGSLFRILHRP---HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~---~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      ||||||+++|+|.+++.+.   ...+++..++.++.||+.||.|||++|  |+||||||+||||+.+|++||+|||+++.
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeee
Confidence            9999999999999998653   346899999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhccccccCCCCcC
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMN----PMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~----~~eil~~I~~~~~r~~ip~~l  901 (935)
                      ...........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..    ..++...+.  .....+|..+
T Consensus       339 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~--~~~~~~p~~~  416 (543)
T 3c4z_A          339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF  416 (543)
T ss_dssp             CCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH--HCCCCCCTTS
T ss_pred             ccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh--hcccCCCccc
Confidence            6554333445689999999999999999999999999999999999999998753    344544443  3455678889


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcC-----HHHHHhCcC
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTS-----QAQLSHKRF  934 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPS-----a~EILqHPF  934 (935)
                      ++.+++||.+||+.|   |.+||+     +++|++|||
T Consensus       417 s~~~~~li~~lL~~d---P~~R~~~~~~~a~ei~~Hpf  451 (543)
T 3c4z_A          417 SPASKDFCEALLQKD---PEKRLGFRDGSCDGLRTHPL  451 (543)
T ss_dssp             CHHHHHHHHHHSCSS---GGGSCCCBTTBSHHHHTSGG
T ss_pred             CHHHHHHHHHhccCC---HhHCCCCcccCHHHHHcCcc
Confidence            999999999999999   999995     589999998


No 136
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.4e-42  Score=392.21  Aligned_cols=250  Identities=32%  Similarity=0.555  Sum_probs=219.8

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC-c
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP-N  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~-~  747 (935)
                      ..+++..++|++.+.||+|+||.||+|+++++.||||+++...    ....+.+|+.+|++++|||||++++++.... .
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence            4577888999999999999999999999999999999987654    2456889999999999999999999976655 7


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHC-QVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~-~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ++|||||+++|+|.+++.+.+. .+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            9999999999999999976433 4789999999999999999999999  999999999999999999999999999854


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHH
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                      ...   .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....++...+. ...+...|..+++.+
T Consensus       340 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l  415 (450)
T 1k9a_A          340 SST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAV  415 (450)
T ss_dssp             C---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             ccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHH
Confidence            332   223467889999999999999999999999999999998 999999988777776664 445677889999999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .+||.+||+.|   |.+||++.+|++
T Consensus       416 ~~li~~cl~~d---p~~Rpt~~~l~~  438 (450)
T 1k9a_A          416 YDVMKNCWHLD---AATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHcCCC---hhHCcCHHHHHH
Confidence            99999999999   999999999875


No 137
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2.6e-42  Score=397.82  Aligned_cols=252  Identities=27%  Similarity=0.438  Sum_probs=216.1

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH-----------HHHHHHHHHHHHHHHcCCCceeeeecc
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG-----------AALLEFKREVKIMRRLRHPNVVLFMGA  741 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~-----------~~~~~f~~Ei~iL~~L~HPNIVkl~g~  741 (935)
                      .++|.++++||+|+||+||+|++  .++.||||++.......           .....+.+|+.+|++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            36899999999999999999987  57889999987654322           234578899999999999999999999


Q ss_pred             cccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC---cEEEE
Q 002331          742 VTRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW---NVKVS  818 (935)
Q Consensus       742 ~~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g---~VKL~  818 (935)
                      +.+...+|||||||++|+|.+++... ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++   .+||+
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEE
Confidence            99999999999999999999988653 46999999999999999999999999  99999999999998776   69999


Q ss_pred             eccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC-
Q 002331          819 DFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEI-  897 (935)
Q Consensus       819 DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~i-  897 (935)
                      |||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..++...+......... 
T Consensus       192 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  269 (504)
T 3q5i_A          192 DFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN  269 (504)
T ss_dssp             CCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH
T ss_pred             ECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            99999876543 23345679999999999875 5889999999999999999999999999998888877544333222 


Q ss_pred             -CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          898 -PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       898 -p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                       ...+++.+++||.+||+.|   |.+||+++++|+|||
T Consensus       270 ~~~~~s~~~~~li~~~L~~d---p~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          270 DWKNISDEAKELIKLMLTYD---YNKRCTAEEALNSRW  304 (504)
T ss_dssp             HHTTSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             ccCCCCHHHHHHHHHHcCCC---hhHCCCHHHHhcCHh
Confidence             2568999999999999999   999999999999998


No 138
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.9e-42  Score=367.63  Aligned_cols=249  Identities=22%  Similarity=0.360  Sum_probs=215.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|.+.+.||+|+||.||++++  +++.||||++.....  .....+.+|+.+++.++||||+++++++.+.+.+++|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            5799999999999999999987  588999999876432  223467899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~~~  830 (935)
                      |+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+|||+   +.++.+||+|||++...... 
T Consensus        87 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-  162 (304)
T 2jam_A           87 LVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-  162 (304)
T ss_dssp             CCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred             cCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence            99999999998653 46899999999999999999999999  9999999999999   78899999999999765432 


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR--LEIPKELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r--~~ip~~ls~~L~dL  908 (935)
                       ......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+......  ...+..+++.+.+|
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  241 (304)
T 2jam_A          163 -IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDF  241 (304)
T ss_dssp             -TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHH
T ss_pred             -ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHH
Confidence             122346899999999999999999999999999999999999999998888777766433322  23446789999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       242 i~~~l~~d---p~~Rps~~~~l~h~~  264 (304)
T 2jam_A          242 ICHLLEKD---PNERYTCEKALSHPW  264 (304)
T ss_dssp             HHHHHCSS---TTTSCCHHHHHTSHH
T ss_pred             HHHHcCCC---hhHCcCHHHHhcCcc
Confidence            99999999   999999999999998


No 139
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=2.6e-42  Score=366.93  Aligned_cols=253  Identities=30%  Similarity=0.495  Sum_probs=210.5

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc-
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR-  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~-  744 (935)
                      ++..++|++++.||+|+||.||+|++      .++.||||++...  .......+.+|+.+|++++||||+++++++.. 
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   83 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA   83 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            45568899999999999999999984      5788999998754  34556778999999999999999999998854 


Q ss_pred             -CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccc
Q 002331          745 -PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLS  823 (935)
Q Consensus       745 -~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA  823 (935)
                       ...+++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccc
Confidence             45689999999999999999876667999999999999999999999998  999999999999999999999999999


Q ss_pred             ccccCCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----------------HH
Q 002331          824 RLKHNTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM----------------QV  884 (935)
Q Consensus       824 ~~~~~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~----------------ei  884 (935)
                      .......   .......++..|+|||++.+..++.++|||||||++|+|++|..||......                ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  241 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence            8764332   1122345677899999999999999999999999999999999998754221                11


Q ss_pred             HHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          885 VGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       885 l~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ...+ ....+...+..+++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       242 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~el~~~  285 (295)
T 3ugc_A          242 IELL-KNNGRLPRPDGCPDEIYMIMTECWNNN---VNQRPSFRDLALR  285 (295)
T ss_dssp             HHHH-HTTCCCCCCTTCCHHHHHHHHHHSCSS---GGGSCCHHHHHHH
T ss_pred             HHHH-hccCcCCCCcCcCHHHHHHHHHHcCCC---hhhCCCHHHHHHH
Confidence            1122 234556678889999999999999999   9999999999863


No 140
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-42  Score=372.67  Aligned_cols=252  Identities=24%  Similarity=0.364  Sum_probs=208.6

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC--ceEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP--NLSI  750 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~--~l~L  750 (935)
                      .++|++.+.||+|+||+||+|++.  ++.||||++...... .....+.+|+.+|++++||||+++++++....  .+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            468999999999999999999884  889999998754322 22456779999999999999999999987655  7899


Q ss_pred             EEeeCCCCCHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee----cCCCcEEEEeccccc
Q 002331          751 ITEFLPRGSLFRILHRPH--CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV----DKNWNVKVSDFGLSR  824 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~--~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL----d~~g~VKL~DFGlA~  824 (935)
                      ||||+++++|.+++....  ..+++..++.|+.||+.||.|||++|  |+||||||+||||    +.++.+||+|||+++
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999997643  23899999999999999999999999  9999999999999    788889999999998


Q ss_pred             cccCCcccCCCCCCCCCccCccccc--------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccc
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLR--------NEPSNEKCDVYSFGVILWELATLKLPWIGMNP----MQVVGAVGFQN  892 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~--------g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~----~eil~~I~~~~  892 (935)
                      ...... ......||+.|+|||++.        +..++.++|||||||++|||++|+.||.....    .++...+....
T Consensus       165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             ECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             ecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            765442 234467999999999986        56789999999999999999999999975332    33333332111


Q ss_pred             c-----------------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCc
Q 002331          893 R-----------------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKR  933 (935)
Q Consensus       893 ~-----------------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHP  933 (935)
                      .                       ...++..++..+.+||.+||+.|   |.+||+++|+|+||
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d---P~~R~s~~ell~h~  304 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD---QEKCWGFDQFFAET  304 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCC---TTTSCCHHHHHHHH
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCC---hhhhccHHHhhhcc
Confidence            1                       01233456778999999999999   99999999999987


No 141
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.1e-42  Score=377.06  Aligned_cols=256  Identities=29%  Similarity=0.390  Sum_probs=210.1

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ...++.+..++|++++.||+|+||.||+|++.++.||||++....   .....+.+|+.+|++++|||||++++++....
T Consensus        15 ~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           15 GTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT   91 (322)
T ss_dssp             CCCCEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             CccccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence            344566778899999999999999999999999999999986543   33445667999999999999999999998754


Q ss_pred             c----eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCEEeeCCCCCCeeecCC
Q 002331          747 N----LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS----------TPTIVHRDLKSPNLLVDKN  812 (935)
Q Consensus       747 ~----l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~----------g~~IIHrDLKPeNILLd~~  812 (935)
                      .    +++||||+++|+|.+++.+  ..+++..++.|+.||+.||.|||+.          +  |+||||||+||||+.+
T Consensus        92 ~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~  167 (322)
T 3soc_A           92 SVDVDLWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNN  167 (322)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTT
T ss_pred             CCCceEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCC
Confidence            3    6999999999999999976  3589999999999999999999998          7  9999999999999999


Q ss_pred             CcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCC-----
Q 002331          813 WNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNE-----PSNEKCDVYSFGVILWELATLKLPWIGMN-----  880 (935)
Q Consensus       813 g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~-----~~s~ksDIWSLG~ILyELLTG~~PF~~~~-----  880 (935)
                      +.+||+|||+++.......  ......||+.|+|||++.+.     .++.++|||||||++|||++|+.||.+..     
T Consensus       168 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~  247 (322)
T 3soc_A          168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML  247 (322)
T ss_dssp             CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC
T ss_pred             CeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc
Confidence            9999999999987654322  23345799999999999874     34668899999999999999999997642     


Q ss_pred             -----------hHHHHHHhhccccccCCCC-----cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 -----------PMQVVGAVGFQNRRLEIPK-----ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 -----------~~eil~~I~~~~~r~~ip~-----~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                                 ...+...+.....++.++.     ..++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~ell~~  312 (322)
T 3soc_A          248 PFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD---AEARLSAGCVGER  312 (322)
T ss_dssp             TTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             chhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCC---hhhCcCHHHHHHH
Confidence                       2233333333333333332     23456999999999999   9999999999874


No 142
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=8.7e-42  Score=370.77  Aligned_cols=258  Identities=29%  Similarity=0.499  Sum_probs=223.9

Q ss_pred             ccccCCCCCCeeEEEEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceee
Q 002331          668 VCECEIPWEDLVLGERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVL  737 (935)
Q Consensus       668 ~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVk  737 (935)
                      ...+++..++|++++.||+|+||.||+|++.         +..||||++.... .......+.+|+.+++++ +||||++
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~  105 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIIN  105 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEee
Confidence            3456778899999999999999999999863         4679999987543 445667889999999999 8999999


Q ss_pred             eecccccCCceEEEEeeCCCCCHHHHHcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCC
Q 002331          738 FMGAVTRPPNLSIITEFLPRGSLFRILHRPH---------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDL  802 (935)
Q Consensus       738 l~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~---------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDL  802 (935)
                      +++++...+.+++||||+++++|.+++....               ..+++..++.++.||+.||.|||+++  |+||||
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dl  183 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDL  183 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCC
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCC
Confidence            9999999999999999999999999997643               24889999999999999999999999  999999


Q ss_pred             CCCCeeecCCCcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002331          803 KSPNLLVDKNWNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGM  879 (935)
Q Consensus       803 KPeNILLd~~g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~  879 (935)
                      ||+||||+.++.+||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  263 (334)
T 2pvf_A          184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  263 (334)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence            99999999999999999999987654321  2233456788999999999889999999999999999999 99999999


Q ss_pred             ChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          880 NPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       880 ~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ...++...+. ...+..++..++..+.+||.+||+.|   |.+||++.+|+++
T Consensus       264 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~~  312 (334)
T 2pvf_A          264 PVEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVED  312 (334)
T ss_dssp             CHHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCC---hhhCcCHHHHHHH
Confidence            8887776654 34456677889999999999999999   9999999999875


No 143
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=9e-43  Score=378.29  Aligned_cols=254  Identities=22%  Similarity=0.351  Sum_probs=218.9

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCH---------------HHHHHHHHHHHHHHHcCCCcee
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSG---------------AALLEFKREVKIMRRLRHPNVV  736 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~---------------~~~~~f~~Ei~iL~~L~HPNIV  736 (935)
                      .+..++|++++.||+|+||.||+|+++++.||||++.......               .....+.+|+.++++++||||+
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~  106 (348)
T 2pml_X           27 DKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL  106 (348)
T ss_dssp             CEEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred             ccccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence            3456899999999999999999999999999999987543211               1126788999999999999999


Q ss_pred             eeecccccCCceEEEEeeCCCCCHHHH------HcCC-CCCCCHHHHHHHHHHHHHHHHHHHh-cCCCEEeeCCCCCCee
Q 002331          737 LFMGAVTRPPNLSIITEFLPRGSLFRI------LHRP-HCQVDEKRRIKMALDVARGMNCLHT-STPTIVHRDLKSPNLL  808 (935)
Q Consensus       737 kl~g~~~~~~~l~LVmEy~~gGsL~dl------L~~~-~~~lse~~il~Ia~QIa~AL~yLHs-~g~~IIHrDLKPeNIL  808 (935)
                      ++++++.+.+.+++||||+++++|.++      +.+. ...+++..++.++.||+.||.|||+ +|  |+||||||+|||
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil  184 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNIL  184 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEE
T ss_pred             eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEE
Confidence            999999999999999999999999998      5542 4679999999999999999999999 88  999999999999


Q ss_pred             ecCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCC-CCCc-hhHHHHHHHHHHHHHcCCCCCCCCCh-HHHH
Q 002331          809 VDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNE-PSNE-KCDVYSFGVILWELATLKLPWIGMNP-MQVV  885 (935)
Q Consensus       809 Ld~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~-~~s~-ksDIWSLG~ILyELLTG~~PF~~~~~-~eil  885 (935)
                      |+.++.+||+|||++......  ......|++.|+|||++.+. .++. ++|||||||++|+|++|..||..... .+..
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  262 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF  262 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred             EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence            999999999999999876443  23456789999999999887 5665 99999999999999999999998776 6666


Q ss_pred             HHhhccccccCCC-------------------CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          886 GAVGFQNRRLEIP-------------------KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       886 ~~I~~~~~r~~ip-------------------~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+...  ...++                   ..+++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       263 ~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d---P~~Rps~~e~l~hp~  325 (348)
T 2pml_X          263 NNIRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN---PAERITSEDALKHEW  325 (348)
T ss_dssp             HHHTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSS---GGGSCCHHHHHTSGG
T ss_pred             HHHhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCC---hhhCCCHHHHhcCcc
Confidence            555322  33333                   568999999999999999   999999999999998


No 144
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=8.6e-43  Score=381.73  Aligned_cols=244  Identities=22%  Similarity=0.333  Sum_probs=212.4

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHH------HHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGA------ALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~------~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++........      ....+.+|+.+|++++||||++++++|.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            6899999999999999999976  688999999986543221      33456789999999999999999999999999


Q ss_pred             eEEEEeeCCCC-CHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRG-SLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gG-sL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      +++||||+.+| +|.+++.+. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99999999776 999999764 46999999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHH
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                      .... ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||......        .......+..+++.+
T Consensus       181 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~l  251 (335)
T 3dls_A          181 ERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHPPYLVSKEL  251 (335)
T ss_dssp             CTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCCSSCCCHHH
T ss_pred             CCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCCCcccCHHH
Confidence            5432 2334679999999999998876 88999999999999999999999864321        223344566789999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+||.+||+.|   |.+||++.+|++|||
T Consensus       252 ~~li~~~L~~d---P~~Rps~~ell~hp~  277 (335)
T 3dls_A          252 MSLVSGLLQPV---PERRTTLEKLVTDPW  277 (335)
T ss_dssp             HHHHHHHTCSS---GGGSCCHHHHHHCTT
T ss_pred             HHHHHHHccCC---hhhCcCHHHHhcCcc
Confidence            99999999999   999999999999999


No 145
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=7.6e-43  Score=375.44  Aligned_cols=254  Identities=25%  Similarity=0.374  Sum_probs=211.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce---
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL---  748 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l---  748 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++..... .......+.+|+.++++++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            47899999999999999999986  688999999977543 345566789999999999999999999998766543   


Q ss_pred             -EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 -SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 -~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                       |+||||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++...
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence             9999999999999999753 46899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCcCc
Q 002331          828 NTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--EIPKELD  902 (935)
Q Consensus       828 ~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--~ip~~ls  902 (935)
                      ...   .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.................  .....++
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS  247 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCC
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCC
Confidence            321   12234568999999999999999999999999999999999999999988877665543222211  1235689


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +++.+||.+||+.|   |.+||+..+++.|+|
T Consensus       248 ~~l~~li~~~l~~d---P~~R~~~~~~l~~~l  276 (311)
T 3ork_A          248 ADLDAVVLKALAKN---PENRYQTAAEMRADL  276 (311)
T ss_dssp             HHHHHHHHHHTCSS---GGGSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhcC---HhhChhhHHHHHHHH
Confidence            99999999999999   999999999999887


No 146
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.4e-42  Score=365.28  Aligned_cols=255  Identities=26%  Similarity=0.439  Sum_probs=212.5

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      +..++|.....||+|+||.||+|++  +++.||||++....  ......+.+|+.+++.++||||+++++++...+.+++
T Consensus        19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   96 (295)
T 2clq_A           19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI   96 (295)
T ss_dssp             ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEE
Confidence            4445566666899999999999987  57789999987653  2345678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC-CCcEEEEecccccccc
Q 002331          751 ITEFLPRGSLFRILHRPH--CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK-NWNVKVSDFGLSRLKH  827 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~--~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~-~g~VKL~DFGlA~~~~  827 (935)
                      ||||+++++|.+++....  ..+++..++.++.||+.||.|||++|  |+||||||+||||+. ++.+||+|||++....
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            999999999999997542  34678999999999999999999998  999999999999987 8999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCcCcHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEP--SNEKCDVYSFGVILWELATLKLPWIGMNPM-QVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~--~s~ksDIWSLG~ILyELLTG~~PF~~~~~~-eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..........|++.|+|||++.+..  ++.++|||||||++|+|++|+.||...... ..............++..+++.
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE  254 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHH
T ss_pred             CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHH
Confidence            4333334567999999999997643  789999999999999999999999865432 2222222334556778889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +.+||.+||+.|   |.+||++.++|+|||
T Consensus       255 ~~~li~~~l~~d---p~~Rps~~~ll~~~~  281 (295)
T 2clq_A          255 AKAFILKCFEPD---PDKRACANDLLVDEF  281 (295)
T ss_dssp             HHHHHHHTTCSS---TTTSCCHHHHHTSGG
T ss_pred             HHHHHHHHccCC---hhhCCCHHHHhcChh
Confidence            999999999999   999999999999998


No 147
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.8e-42  Score=383.82  Aligned_cols=253  Identities=28%  Similarity=0.495  Sum_probs=210.8

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ++..++|.+.+.||+|+||.||+|++     .+..||||++.... .......+.+|+.+|++++||||+++++++.+.+
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  119 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK  119 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC
Confidence            45667899999999999999999975     35679999986543 4556678999999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+++||||+++++|.+++.+....+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            999999999999999999887778999999999999999999999998  999999999999999999999999999876


Q ss_pred             cCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCc
Q 002331          827 HNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELD  902 (935)
Q Consensus       827 ~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls  902 (935)
                      .....   ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......++...+. ...+...+..++
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~  276 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EGYRLPPPMDCP  276 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH-TTEECCCCTTCB
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCcccc
Confidence            54321   1122345778999999999999999999999999999998 999999998888777664 334555677899


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ..+.+||.+||+.|   |.+||++.+|++
T Consensus       277 ~~l~~li~~cl~~d---p~~RPs~~~i~~  302 (373)
T 2qol_A          277 AALYQLMLDCWQKD---RNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCcC---hhhCcCHHHHHH
Confidence            99999999999999   999999999886


No 148
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.9e-42  Score=368.14  Aligned_cols=260  Identities=29%  Similarity=0.474  Sum_probs=220.7

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeee
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLF  738 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl  738 (935)
                      ....+++..++|++++.||+|+||.||+|++       .++.||||++.... .......+.+|+.++.++ +||||+++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            3345677889999999999999999999974       34789999987553 445566789999999999 79999999


Q ss_pred             ecccccCC-ceEEEEeeCCCCCHHHHHcCCCCC---------------CCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCC
Q 002331          739 MGAVTRPP-NLSIITEFLPRGSLFRILHRPHCQ---------------VDEKRRIKMALDVARGMNCLHTSTPTIVHRDL  802 (935)
Q Consensus       739 ~g~~~~~~-~l~LVmEy~~gGsL~dlL~~~~~~---------------lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDL  802 (935)
                      ++++...+ .+++||||+++++|.+++......               +++..++.++.||+.||.|||+++  |+||||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~di  174 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDL  174 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccC
Confidence            99987654 489999999999999999764332               889999999999999999999999  999999


Q ss_pred             CCCCeeecCCCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002331          803 KSPNLLVDKNWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGM  879 (935)
Q Consensus       803 KPeNILLd~~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~  879 (935)
                      ||+||||+.++.+||+|||+++......  .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            9999999999999999999998654321  12233457889999999999999999999999999999998 99999887


Q ss_pred             ChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          880 NPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       880 ~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..................+..+++.+.++|.+||+.|   |.+||++.+|++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~~  304 (316)
T 2xir_A          255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE---PSQRPTFSELVEH  304 (316)
T ss_dssp             CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             chhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            6544443333344556777889999999999999999   9999999999986


No 149
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=5.6e-42  Score=379.46  Aligned_cols=250  Identities=22%  Similarity=0.289  Sum_probs=204.2

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC------
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP------  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~------  746 (935)
                      .++|++++.||+|+||.||+|.+  .++.||||++............+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            47899999999999999999976  5889999999876556666778899999999999999999999987665      


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+|+||||+++ +|.+++..   .+++..+..++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence            68999999975 78888864   4889999999999999999999999  999999999999999999999999999866


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR------------  894 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r------------  894 (935)
                      ... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+......            
T Consensus       178 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          178 GTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             ccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            543 2234467999999999999999999999999999999999999999998877665554321110            


Q ss_pred             --------cC--------------CCC------cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 --------LE--------------IPK------ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 --------~~--------------ip~------~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                              +.              +|.      ..+..+++||.+||+.|   |.+|||++++|+|||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d---P~~R~t~~e~l~hp~  321 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID---ASKRISVDEALQHPY  321 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS---GGGSCCHHHHHHSHH
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCC---hhhCCCHHHHhCCcc
Confidence                    00              010      12578999999999999   999999999999998


No 150
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=3.8e-42  Score=369.44  Aligned_cols=257  Identities=30%  Similarity=0.494  Sum_probs=222.6

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC-------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN-------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGA  741 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~-------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~  741 (935)
                      ..+++..++|++.+.||+|+||.||+|.+.       ++.||||++.... .......+.+|+.+++.++||||++++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   96 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGV   96 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence            346677789999999999999999999753       5789999987543 34455678899999999999999999999


Q ss_pred             cccCCceEEEEeeCCCCCHHHHHcCC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC
Q 002331          742 VTRPPNLSIITEFLPRGSLFRILHRP---------HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN  812 (935)
Q Consensus       742 ~~~~~~l~LVmEy~~gGsL~dlL~~~---------~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~  812 (935)
                      +.+.+..++||||+++++|.+++...         ...+++..++.++.||+.||.|||++|  |+||||||+||||+.+
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~  174 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAED  174 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTT
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCC
Confidence            99999999999999999999998642         135789999999999999999999999  9999999999999999


Q ss_pred             CcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 002331          813 WNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVG  889 (935)
Q Consensus       813 g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~  889 (935)
                      +.+||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  254 (322)
T 1p4o_A          175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  254 (322)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH
Confidence            9999999999986543321  1233456889999999999999999999999999999999 899999998887777664


Q ss_pred             ccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          890 FQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       890 ~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                       .......+..+++.+.+||.+||+.|   |.+||++.+++++
T Consensus       255 -~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~e~l~~  293 (322)
T 1p4o_A          255 -EGGLLDKPDNCPDMLFELMRMCWQYN---PKMRPSFLEIISS  293 (322)
T ss_dssp             -TTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             -cCCcCCCCCCCCHHHHHHHHHHcCCC---cccCcCHHHHHHH
Confidence             33445667889999999999999999   9999999999986


No 151
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1e-42  Score=368.76  Aligned_cols=259  Identities=28%  Similarity=0.430  Sum_probs=198.4

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      .+.+..++|++.+.||+|+||.||+|.+  +++.||||++..... ......+.+|+.++++++||||+++++++...+.
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence            3567789999999999999999999976  688999998865432 2335567899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEec
Q 002331          748 LSIITEFLPRGSLFRILHR-------PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDF  820 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~-------~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DF  820 (935)
                      .++||||+++++|.+++..       ....+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+||
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~df  165 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADF  165 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCC
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEec
Confidence            9999999999999999863       3456899999999999999999999999  999999999999999999999999


Q ss_pred             cccccccCCc-----ccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-
Q 002331          821 GLSRLKHNTF-----LSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR-  893 (935)
Q Consensus       821 GlA~~~~~~~-----~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~-  893 (935)
                      |++.......     .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||................. 
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  245 (303)
T 2vwi_A          166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP  245 (303)
T ss_dssp             HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC
T ss_pred             cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC
Confidence            9987654321     11234578999999999876 5689999999999999999999999998776655443321111 


Q ss_pred             -------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 -------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 -------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                             .......++..+.+||.+||+.|   |.+||++.+|++|||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~d---p~~Rps~~~ll~h~~  290 (303)
T 2vwi_A          246 SLETGVQDKEMLKKYGKSFRKMISLCLQKD---PEKRPTAAELLRHKF  290 (303)
T ss_dssp             CTTC-----CCCCCCCHHHHHHHHHHCCSS---GGGSCCHHHHHTSTT
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHccCC---hhhCcCHHHHhhChh
Confidence                   11233567899999999999999   999999999999998


No 152
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.5e-42  Score=405.92  Aligned_cols=255  Identities=22%  Similarity=0.291  Sum_probs=221.4

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l  748 (935)
                      .+..++|++.+.||+|+||.||+|++  +|+.||||++...... ......+.+|+.+|+.++|||||+++++|.+.+.+
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  259 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL  259 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence            45668899999999999999999987  5889999998754321 12244578999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 SIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ||||||+++|+|.+++.... ..+++..++.++.||+.||.|||++|  ||||||||+||||+.+|++||+|||+++...
T Consensus       260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecc
Confidence            99999999999999987643 35899999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhccccccCCCCcCcH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMN----PMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~----~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..    ...+...+  ...+..++..+++
T Consensus       338 ~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i--~~~~~~~p~~~s~  414 (576)
T 2acx_A          338 EGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV--KEVPEEYSERFSP  414 (576)
T ss_dssp             TTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH--HHCCCCCCTTSCH
T ss_pred             cCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh--hcccccCCccCCH
Confidence            432 2234689999999999999999999999999999999999999998753    33444443  2345567788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      ++++||.+||+.|   |.+||     ++++|++|||
T Consensus       415 ~~~dLI~~lL~~d---P~~R~g~~~~sa~eil~Hpf  447 (576)
T 2acx_A          415 QARSLCSQLLCKD---PAERLGCRGGSAREVKEHPL  447 (576)
T ss_dssp             HHHHHHHHHTCSS---GGGSTTCSSSHHHHHHTSGG
T ss_pred             HHHHHHHHhccCC---HHHcCCCCCCCHHHHHhChh
Confidence            9999999999999   99999     8999999998


No 153
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.8e-42  Score=379.41  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=206.6

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc-----
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR-----  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~-----  744 (935)
                      +...++|++++.||+|+||+||+|++  +++.||||++......      ..+|+.+|+.++|||||+++++|..     
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence            34567899999999999999999987  6889999998754321      2379999999999999999999843     


Q ss_pred             ---------------------------------CCceEEEEeeCCCCCHHHHHc---CCCCCCCHHHHHHHHHHHHHHHH
Q 002331          745 ---------------------------------PPNLSIITEFLPRGSLFRILH---RPHCQVDEKRRIKMALDVARGMN  788 (935)
Q Consensus       745 ---------------------------------~~~l~LVmEy~~gGsL~dlL~---~~~~~lse~~il~Ia~QIa~AL~  788 (935)
                                                       ...+++||||+++ +|.+++.   +....+++..++.|+.||+.||.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                             3348899999985 7777664   23457999999999999999999


Q ss_pred             HHHhcCCCEEeeCCCCCCeeec-CCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCC-CCchhHHHHHHHHH
Q 002331          789 CLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEP-SNEKCDVYSFGVIL  866 (935)
Q Consensus       789 yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~-~s~ksDIWSLG~IL  866 (935)
                      |||++|  |+||||||+||||+ .++.+||+|||+++..... .......+|+.|+|||++.+.. ++.++|||||||++
T Consensus       156 ~LH~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          156 FIHSLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HHHTTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHHHCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            999999  99999999999998 6899999999999876443 2334567899999999988754 89999999999999


Q ss_pred             HHHHcCCCCCCCCChHHHHHHhhcccc---------------------------ccCCCCcCcHHHHHHHHHHHhhCCCC
Q 002331          867 WELATLKLPWIGMNPMQVVGAVGFQNR---------------------------RLEIPKELDPLVARIIWECWQTGWSS  919 (935)
Q Consensus       867 yELLTG~~PF~~~~~~eil~~I~~~~~---------------------------r~~ip~~ls~~L~dLI~qCL~~D~ss  919 (935)
                      |+|++|+.||.+.+..+.+..+.....                           ...++..+++++.+||.+||+.|   
T Consensus       233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---  309 (383)
T 3eb0_A          233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE---  309 (383)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS---
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC---
Confidence            999999999999887766554421100                           11145668899999999999999   


Q ss_pred             cCCCcCHHHHHhCcC
Q 002331          920 LHIRTSQAQLSHKRF  934 (935)
Q Consensus       920 P~kRPSa~EILqHPF  934 (935)
                      |.+||++.|+|+|||
T Consensus       310 P~~R~t~~e~l~hp~  324 (383)
T 3eb0_A          310 PDLRINPYEAMAHPF  324 (383)
T ss_dssp             GGGSCCHHHHHTSGG
T ss_pred             hhhCCCHHHHhcCHH
Confidence            999999999999998


No 154
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3.9e-42  Score=366.02  Aligned_cols=252  Identities=23%  Similarity=0.396  Sum_probs=213.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC--HHHHHHHHHHHHHHHHcCCCceeeeeccc--ccCCce
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS--GAALLEFKREVKIMRRLRHPNVVLFMGAV--TRPPNL  748 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~--~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~--~~~~~l  748 (935)
                      .++|++++.||+|+||.||++.+  +++.||||++......  ......+.+|+.+++.++||||+++++++  .+...+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            36899999999999999999987  5779999998754321  23456789999999999999999999998  455679


Q ss_pred             EEEEeeCCCCCHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 SIITEFLPRGSLFRILHR-PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~-~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ++||||++++ |.+++.. ....+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++....
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            9999999876 6666643 3457899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CC--cccCCCCCCCCCccCcccccCCCC--CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          828 NT--FLSSKSTAGTPEWMAPEVLRNEPS--NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       828 ~~--~~~~~s~~GT~~Y~APEvl~g~~~--s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ..  ........||+.|+|||++.+...  +.++|||||||++|+|++|..||.+.+..+....+.  .....++..+++
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~  238 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG--KGSYAIPGDCGP  238 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HCCCCCCSSSCH
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh--cCCCCCCCccCH
Confidence            32  122234568999999999987543  789999999999999999999999988887777664  335567788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||++.++++|||
T Consensus       239 ~l~~li~~~l~~d---p~~Rps~~~ll~~~~  266 (305)
T 2wtk_C          239 PLSDLLKGMLEYE---PAKRFSIRQIRQHSW  266 (305)
T ss_dssp             HHHHHHHHHTCSS---TTTSCCHHHHHHSHH
T ss_pred             HHHHHHHHHccCC---hhhCCCHHHHhcCcc
Confidence            9999999999999   999999999999998


No 155
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.1e-41  Score=356.45  Aligned_cols=253  Identities=31%  Similarity=0.538  Sum_probs=219.5

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC-CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN-GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~-g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      .++++..++|++.+.||+|+||.||+|.+. +..||||++......   ...+.+|+.+++.++||||+++++++.. +.
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~   81 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP   81 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEcC-CC
Confidence            356788899999999999999999999875 558999998765433   3568899999999999999999999874 56


Q ss_pred             eEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .++||||+++++|.+++.... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++...
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLI  159 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence            899999999999999997532 26899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          827 HNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       827 ~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..... ......++..|+|||++.+..++.++|||||||++|+|++ |+.||.+....+....+. .......+..+++.
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  238 (279)
T 1qpc_A          160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEE  238 (279)
T ss_dssp             SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred             cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh-cccCCCCcccccHH
Confidence            54322 2233457889999999998889999999999999999999 999999988887776664 33455667889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +.+||.+||..|   |.+||++.+|++
T Consensus       239 l~~li~~~l~~~---p~~Rps~~~l~~  262 (279)
T 1qpc_A          239 LYQLMRLCWKER---PEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHhccC---hhhCCCHHHHHH
Confidence            999999999999   999999999876


No 156
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=9.6e-42  Score=365.53  Aligned_cols=260  Identities=27%  Similarity=0.442  Sum_probs=214.4

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEEC-----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecc
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADWN-----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGA  741 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~-----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~  741 (935)
                      ....+.+..++|.+++.||+|+||.||+|++.     +..||||++............+.+|+.++++++||||++++++
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            44566778899999999999999999999752     3479999998776666777889999999999999999999999


Q ss_pred             cccCC-----ceEEEEeeCCCCCHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC
Q 002331          742 VTRPP-----NLSIITEFLPRGSLFRILH-----RPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK  811 (935)
Q Consensus       742 ~~~~~-----~l~LVmEy~~gGsL~dlL~-----~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~  811 (935)
                      +....     ..++||||+++++|.+++.     .....+++..++.|+.||+.||.|||+++  |+||||||+||||+.
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~  182 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRD  182 (313)
T ss_dssp             EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECT
T ss_pred             EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcC
Confidence            87654     3599999999999999983     23356899999999999999999999998  999999999999999


Q ss_pred             CCcEEEEeccccccccCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 002331          812 NWNVKVSDFGLSRLKHNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAV  888 (935)
Q Consensus       812 ~g~VKL~DFGlA~~~~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I  888 (935)
                      ++.+||+|||++.......  .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  262 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL  262 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence            9999999999998654332  11233457789999999999999999999999999999999 89999998887776655


Q ss_pred             hccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          889 GFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       889 ~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      . ...+...+..+++.+.+||.+||..|   |.+||++.+|+++
T Consensus       263 ~-~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~~  302 (313)
T 3brb_A          263 L-HGHRLKQPEDCLDELYEIMYSCWRTD---PLDRPTFSVLRLQ  302 (313)
T ss_dssp             H-TTCCCCCBTTCCHHHHHHHHHTTCSS---GGGSCCHHHHHHH
T ss_pred             H-cCCCCCCCccccHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            4 34456677889999999999999999   9999999999875


No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=2.3e-42  Score=370.14  Aligned_cols=249  Identities=25%  Similarity=0.343  Sum_probs=204.0

Q ss_pred             CCeeEE-EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEE
Q 002331          676 EDLVLG-ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       676 edy~I~-e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      ++|++. +.||+|+||.||+|++  +++.||||++......  ....+.+|+.++.++ +||||+++++++.+.+.+++|
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC--CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch--hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            568884 7899999999999976  6889999998765322  345678999999985 799999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc---EEEEeccccccccC
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN---VKVSDFGLSRLKHN  828 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~---VKL~DFGlA~~~~~  828 (935)
                      |||+++++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.   +||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  166 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL  166 (316)
T ss_dssp             EECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred             EEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence            9999999999999763 46899999999999999999999999  999999999999987766   99999999876532


Q ss_pred             Cc-------ccCCCCCCCCCccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---------------
Q 002331          829 TF-------LSSKSTAGTPEWMAPEVLRN-----EPSNEKCDVYSFGVILWELATLKLPWIGMNP---------------  881 (935)
Q Consensus       829 ~~-------~~~~s~~GT~~Y~APEvl~g-----~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~---------------  881 (935)
                      ..       .......||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.+...               
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  246 (316)
T 2ac3_A          167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ  246 (316)
T ss_dssp             ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred             CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence            11       11223469999999999975     4578899999999999999999999987542               


Q ss_pred             HHHHHHhhccccccCCC----CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          882 MQVVGAVGFQNRRLEIP----KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       882 ~eil~~I~~~~~r~~ip----~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+...+.  .....++    ..+++.+++||.+||+.|   |.+||++.++|+|||
T Consensus       247 ~~~~~~i~--~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rps~~e~l~hp~  298 (316)
T 2ac3_A          247 NMLFESIQ--EGKYEFPDKDWAHISCAAKDLISKLLVRD---AKQRLSAAQVLQHPW  298 (316)
T ss_dssp             HHHHHHHH--HCCCCCCHHHHTTSCHHHHHHHHHHSCSS---TTTSCCHHHHHHSTT
T ss_pred             HHHHHHHh--ccCcccCchhcccCCHHHHHHHHHHhhCC---hhhCCCHHHHhcChh
Confidence            22333332  2223333    458899999999999999   999999999999999


No 158
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-41  Score=370.00  Aligned_cols=255  Identities=28%  Similarity=0.469  Sum_probs=216.8

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEEC------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWN------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      .++..++|.+.+.||+|+||.||+|.+.      +..||||++.... .......+.+|+.++++++||||+++++++.+
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            4677789999999999999999999763      2359999987543 44556678999999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+.++|||||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcch
Confidence            99999999999999999999876678999999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCc
Q 002331          825 LKHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKE  900 (935)
Q Consensus       825 ~~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~  900 (935)
                      .......   ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......++...+. ...+...+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~  274 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMD  274 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTT
T ss_pred             hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-CCCcCCCccc
Confidence            7643221   1222346788999999999999999999999999999999 999999998888777664 3345566788


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       275 ~~~~l~~li~~~l~~~---p~~Rps~~~l~~~  303 (333)
T 1mqb_A          275 CPSAIYQLMMQCWQQE---RARRPKFADIVSI  303 (333)
T ss_dssp             CBHHHHHHHHHHTCSS---TTTSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            9999999999999999   9999999999864


No 159
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=8.2e-42  Score=360.58  Aligned_cols=255  Identities=29%  Similarity=0.460  Sum_probs=216.7

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEEC-----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWN-----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~-----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      .+.+..++|++.+.||+|+||.||+|.+.     +..||||++.... .......+.+|+.+++.++||||+++++++.+
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   84 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE   84 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence            34567789999999999999999999763     2359999887653 34556788999999999999999999999875


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                       +..++||||+++++|.+++.+....+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++.
T Consensus        85 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           85 -EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             -CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCc
Confidence             4578999999999999999776667999999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCc
Q 002331          825 LKHNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELD  902 (935)
Q Consensus       825 ~~~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls  902 (935)
                      ....... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||...........+. .......+..++
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  240 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLCP  240 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-HTCCCCCCTTCC
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-cCCCCCCCCCCC
Confidence            7654321 2233457789999999999999999999999999999998 999999877776665553 334556778899


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+.+||.+||..|   |.+||++.+|+++
T Consensus       241 ~~l~~li~~~l~~~---p~~Rps~~ell~~  267 (281)
T 3cc6_A          241 PVLYTLMTRCWDYD---PSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCC---chhCcCHHHHHHH
Confidence            99999999999999   9999999999875


No 160
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.6e-41  Score=375.98  Aligned_cols=252  Identities=24%  Similarity=0.379  Sum_probs=217.4

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC--CH----HHHHHHHHHHHHHHHc-CCCceeeeecccccCC
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF--SG----AALLEFKREVKIMRRL-RHPNVVLFMGAVTRPP  746 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~--~~----~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~  746 (935)
                      ++|.+.+.||+|+||.||+|++  +|+.||||++.....  ..    .....+.+|+.+++++ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            5799999999999999999987  588999999876532  21    2345678999999999 8999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ..++||||+++++|.+++... ..+++..++.++.||+.||.|||+.|  |+||||||+||||+.++.+||+|||++...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            999999999999999999753 46899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcccCCCCCCCCCccCcccccC------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRN------EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--  898 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g------~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--  898 (935)
                      ... .......||+.|+|||++.+      ..++.++|||||||++|+|++|..||...+.......+.........+  
T Consensus       251 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  329 (365)
T 2y7j_A          251 EPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW  329 (365)
T ss_dssp             CTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH
T ss_pred             CCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc
Confidence            543 22345689999999999864      357889999999999999999999999988877776664333332222  


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..++..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       330 ~~~~~~~~~li~~~L~~d---P~~Rps~~ell~hp~  362 (365)
T 2y7j_A          330 DDRSSTVKDLISRLLQVD---PEARLTAEQALQHPF  362 (365)
T ss_dssp             SSSCHHHHHHHHHHSCSS---TTTSCCHHHHHHSGG
T ss_pred             ccCCHHHHHHHHHHcCCC---hhHCcCHHHHhcCcc
Confidence            467889999999999999   999999999999998


No 161
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=6.9e-42  Score=369.73  Aligned_cols=257  Identities=27%  Similarity=0.427  Sum_probs=220.8

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEECC-------ceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWNG-------TEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGA  741 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-------~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~  741 (935)
                      .+++..++|++++.||+|+||.||+|.+.+       ..||||++.... .......+.+|+.+++.+ +||||++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            467888999999999999999999998732       379999987553 344567789999999999 89999999999


Q ss_pred             cccCCceEEEEeeCCCCCHHHHHcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCee
Q 002331          742 VTRPPNLSIITEFLPRGSLFRILHRP-------------HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLL  808 (935)
Q Consensus       742 ~~~~~~l~LVmEy~~gGsL~dlL~~~-------------~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNIL  808 (935)
                      +.+.+.+++||||+++|+|.+++.+.             ...+++..++.++.||+.||.|||+++  |+||||||+|||
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl  196 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVL  196 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEE
Confidence            99999999999999999999998642             245799999999999999999999998  999999999999


Q ss_pred             ecCCCcEEEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 002331          809 VDKNWNVKVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVV  885 (935)
Q Consensus       809 Ld~~g~VKL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil  885 (935)
                      |+.++.+||+|||++........  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.......
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  276 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF  276 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence            99999999999999986543221  1233456788999999999999999999999999999998 89999987665555


Q ss_pred             HHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          886 GAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       886 ~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..+.........+..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~---p~~Rps~~~l~~~  320 (333)
T 2i1m_A          277 YKLVKDGYQMAQPAFAPKNIYSIMQACWALE---PTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHhccC---hhhCcCHHHHHHH
Confidence            4444445556677888999999999999999   9999999999874


No 162
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=7.7e-42  Score=367.10  Aligned_cols=252  Identities=28%  Similarity=0.380  Sum_probs=210.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE---CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc---CCCceeeeecccc-----c
Q 002331          676 EDLVLGERIGLGSYGEVYHADW---NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL---RHPNVVLFMGAVT-----R  744 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~---~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L---~HPNIVkl~g~~~-----~  744 (935)
                      ++|++.+.||+|+||.||+|++   +++.||||++............+.+|+.+++.+   +||||+++++++.     .
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   90 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   90 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence            6899999999999999999987   467899999875443222223455777777766   8999999999986     5


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLS  823 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA  823 (935)
                      ...+++||||++ ++|.+++... ...+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCccc
Confidence            667999999997 5999998653 345899999999999999999999999  999999999999999999999999999


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR----------  893 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~----------  893 (935)
                      ....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........+.....          
T Consensus       168 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (326)
T 1blx_A          168 RIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  246 (326)
T ss_dssp             CCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             ccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccc
Confidence            8665332 23456789999999999999999999999999999999999999999887766554421100          


Q ss_pred             ---------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 ---------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 ---------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                     ...+...++..+++||.+||+.|   |.+||++.++|+|||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  299 (326)
T 1blx_A          247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN---PAKRISAYSALSHPY  299 (326)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS---TTTSCCHHHHHTSGG
T ss_pred             cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCC---cccCCCHHHHhcCcc
Confidence                           01233568899999999999999   999999999999998


No 163
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=5.7e-42  Score=376.66  Aligned_cols=248  Identities=19%  Similarity=0.219  Sum_probs=203.5

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC--------CCceeeeecccc-
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR--------HPNVVLFMGAVT-  743 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~--------HPNIVkl~g~~~-  743 (935)
                      .++|++.++||+|+||+||+|++  .++.||||++...   ......+.+|+.+|+.++        |+||++++++|. 
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            47899999999999999999976  5789999998643   345567889999999985        788999999987 


Q ss_pred             ---cCCceEEEEeeCCCCCHHHHH-cCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCC-----
Q 002331          744 ---RPPNLSIITEFLPRGSLFRIL-HRPHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNW-----  813 (935)
Q Consensus       744 ---~~~~l~LVmEy~~gGsL~dlL-~~~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g-----  813 (935)
                         ....++|||||+.+ +|.+++ ......+++..++.|+.||+.||.|||++ |  |+||||||+||||+.++     
T Consensus       113 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          113 SGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             EETTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHH
T ss_pred             cCCCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhh
Confidence               56679999999954 555554 44446799999999999999999999998 8  99999999999998775     


Q ss_pred             --------------------------------------------cEEEEeccccccccCCcccCCCCCCCCCccCccccc
Q 002331          814 --------------------------------------------NVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLR  849 (935)
Q Consensus       814 --------------------------------------------~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~  849 (935)
                                                                  .+||+|||+++.....   .....||+.|+|||++.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~  266 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLI  266 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhc
Confidence                                                        7999999999876543   23467899999999999


Q ss_pred             CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------HHHHHHhhcc-c------------------------------
Q 002331          850 NEPSNEKCDVYSFGVILWELATLKLPWIGMNP------MQVVGAVGFQ-N------------------------------  892 (935)
Q Consensus       850 g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~------~eil~~I~~~-~------------------------------  892 (935)
                      +..++.++|||||||+||+|++|+.||.+.+.      ......+... .                              
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            99999999999999999999999999986542      1111111000 0                              


Q ss_pred             ---------cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 ---------RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ---------~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                               .....+...++.+.+||.+||+.|   |.+||++.+||+|||
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  394 (397)
T 1wak_A          347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI---PEKRATAAECLRHPW  394 (397)
T ss_dssp             CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSS---GGGSCCHHHHHTSGG
T ss_pred             CcchhHhhhhhcccchhhHHHHHHHHHHHhccC---hhhcCCHHHHhhCcc
Confidence                     001123445678999999999999   999999999999999


No 164
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=6e-42  Score=361.64  Aligned_cols=255  Identities=34%  Similarity=0.572  Sum_probs=223.3

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ..+++..++|++.+.||+|+||.||+|.+.  +..||||++....   .....+.+|+.++++++||||+++++++.+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   82 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            356778899999999999999999999884  7889999987543   24567889999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          747 NLSIITEFLPRGSLFRILHR-PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~-~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .+++||||+++++|.+++.+ ....+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++..
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999999999999975 3356899999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          826 KHNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       826 ~~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ...... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+. ...+...+..+++
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (288)
T 3kfa_A          161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE  239 (288)
T ss_dssp             SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCCH
T ss_pred             ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-ccCCCCCCCCCCH
Confidence            654321 2233456788999999999999999999999999999999 999999988877766554 3455667788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+.+||.+||+.|   |.+||++.+|++.
T Consensus       240 ~l~~li~~~l~~d---p~~Rps~~~~~~~  265 (288)
T 3kfa_A          240 KVYELMRACWQWN---PSDRPSFAEIHQA  265 (288)
T ss_dssp             HHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhCCC---hhhCcCHHHHHHH
Confidence            9999999999999   9999999999863


No 165
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=8.6e-42  Score=367.95  Aligned_cols=245  Identities=20%  Similarity=0.319  Sum_probs=204.6

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeeccccc--CCceE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTR--PPNLS  749 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~--~~~l~  749 (935)
                      .++|++++.||+|+||.||+|.+  +++.||||++....     ...+.+|+.+|++++ ||||+++++++.+  ....+
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            36899999999999999999976  68899999986443     356889999999996 9999999999987  66789


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC-cEEEEeccccccccC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW-NVKVSDFGLSRLKHN  828 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g-~VKL~DFGlA~~~~~  828 (935)
                      +||||+++++|.+++..    +++..++.++.||+.||.|||++|  |+||||||+||||+.++ .+||+|||+++....
T Consensus       110 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            99999999999999853    889999999999999999999999  99999999999999776 899999999987654


Q ss_pred             CcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhc-------------cc-
Q 002331          829 TFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGM-NPMQVVGAVGF-------------QN-  892 (935)
Q Consensus       829 ~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~-~~~eil~~I~~-------------~~-  892 (935)
                      .. ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||... ...+.+..+..             .. 
T Consensus       184 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  262 (330)
T 3nsz_A          184 GQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  262 (330)
T ss_dssp             TC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             CC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence            32 2345678999999999987 66899999999999999999999999643 22222211100             00 


Q ss_pred             ---------------------cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 ---------------------RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ---------------------~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                           .....+..+++.+.+||.+||+.|   |.+||+++++|+|||
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpta~e~l~hp~  322 (330)
T 3nsz_A          263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD---HQSRLTAREAMEHPY  322 (330)
T ss_dssp             CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSS---GGGSCCHHHHHTSGG
T ss_pred             ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCC---cccCCCHHHHhcCcc
Confidence                                 001112337899999999999999   999999999999998


No 166
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.2e-41  Score=361.09  Aligned_cols=247  Identities=32%  Similarity=0.564  Sum_probs=202.0

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHH--cCCCceeeeeccccc----CCc
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRR--LRHPNVVLFMGAVTR----PPN  747 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~--L~HPNIVkl~g~~~~----~~~  747 (935)
                      ..++|++.+.||+|+||+||+|+++++.||||++....     ...+.+|.+++..  ++||||+++++++..    ...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            34689999999999999999999999999999986542     3345567777776  799999999998643    345


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCEEeeCCCCCCeeecCCCcEEEEe
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLH--------TSTPTIVHRDLKSPNLLVDKNWNVKVSD  819 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLH--------s~g~~IIHrDLKPeNILLd~~g~VKL~D  819 (935)
                      +++||||+++|+|.++++.  ..+++..++.|+.||+.||.|||        +++  |+||||||+||||+.++.+||+|
T Consensus        81 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~D  156 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIAD  156 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEECC
T ss_pred             eEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEee
Confidence            8999999999999999965  46999999999999999999999        777  99999999999999999999999


Q ss_pred             ccccccccCCcc----cCCCCCCCCCccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCCCC
Q 002331          820 FGLSRLKHNTFL----SSKSTAGTPEWMAPEVLRNE------PSNEKCDVYSFGVILWELATL----------KLPWIGM  879 (935)
Q Consensus       820 FGlA~~~~~~~~----~~~s~~GT~~Y~APEvl~g~------~~s~ksDIWSLG~ILyELLTG----------~~PF~~~  879 (935)
                      ||+++.......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...
T Consensus       157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence            999976543321    12345799999999999876      345799999999999999999          8888653


Q ss_pred             C-----hHHHHHHhhccccccCCCC-----cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          880 N-----PMQVVGAVGFQNRRLEIPK-----ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       880 ~-----~~eil~~I~~~~~r~~ip~-----~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .     ...+...+.....+..++.     .+++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~~i~~~  296 (301)
T 3q4u_A          237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQN---PSARLTALRIKKT  296 (301)
T ss_dssp             SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSS---GGGSCCHHHHHHH
T ss_pred             CCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcC---hhhCCCHHHHHHH
Confidence            2     2333333333344444443     35688999999999999   9999999999863


No 167
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.1e-41  Score=372.86  Aligned_cols=257  Identities=19%  Similarity=0.286  Sum_probs=207.3

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCC---------CHHHHHHHHHHHHHHHHcCCCceeeeec
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDF---------SGAALLEFKREVKIMRRLRHPNVVLFMG  740 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~---------~~~~~~~f~~Ei~iL~~L~HPNIVkl~g  740 (935)
                      .....++|++++.||+|+||.||+|.+ .++.||||++.....         .......+.+|+.+|++++||||+++++
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            334568899999999999999999976 688999999865322         2234567899999999999999999999


Q ss_pred             ccc-----cCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcE
Q 002331          741 AVT-----RPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNV  815 (935)
Q Consensus       741 ~~~-----~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~V  815 (935)
                      ++.     ....+|+||||++ |+|.+++......+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~  173 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDI  173 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCE
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCCCCE
Confidence            983     3346899999997 5888888776678999999999999999999999999  9999999999999999999


Q ss_pred             EEEeccccccccCCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc
Q 002331          816 KVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR  894 (935)
Q Consensus       816 KL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r  894 (935)
                      ||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+....+......
T Consensus       174 kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  252 (362)
T 3pg1_A          174 TICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT  252 (362)
T ss_dssp             EECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            99999999755433 22344678999999999987 67899999999999999999999999998876665544211110


Q ss_pred             ------------------------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 ------------------------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 ------------------------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                                    ..++..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFN---PQRRISTEQALRHPY  319 (362)
T ss_dssp             CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHTSGG
T ss_pred             CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCC---hhhCCCHHHHHcCch
Confidence                                          0122456889999999999999   999999999999998


No 168
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.8e-41  Score=375.37  Aligned_cols=247  Identities=25%  Similarity=0.360  Sum_probs=210.6

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce-----
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL-----  748 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l-----  748 (935)
                      ++|.+.+.||+|+||.||+|.+  +++.||||++............+.+|+.+++.++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            6899999999999999999986  588999999987766666778889999999999999999999999877665     


Q ss_pred             -EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 -SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 -~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                       ++||||+. ++|.+++..   .+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus       122 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence             99999997 589888854   4899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR------------  894 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r------------  894 (935)
                      ..   .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......            
T Consensus       196 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (371)
T 4exu_A          196 AE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  272 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred             cC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence            33   234678999999999987 67899999999999999999999999998876665544211100            


Q ss_pred             -----------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 -----------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 -----------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                       ..++..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  326 (371)
T 4exu_A          273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD---VDKRLTAAQALTHPF  326 (371)
T ss_dssp             HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSC---TTTSCCHHHHHTSGG
T ss_pred             hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCC---hhhcCCHHHHhcCcc
Confidence                             0122457899999999999999   999999999999998


No 169
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=8.3e-42  Score=389.06  Aligned_cols=253  Identities=30%  Similarity=0.534  Sum_probs=221.9

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC-CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN-GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~-g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..+++..++|++.+.||+|+||.||+|+++ +..||||++......   .+.+.+|+.+|++++|||||++++++. .+.
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc---HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            457788899999999999999999999884 678999998765432   557889999999999999999999987 567


Q ss_pred             eEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ++|||||+++|+|.+++.+.. ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVI  334 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence            899999999999999997532 35888999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          827 HNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       827 ~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..... ......++..|+|||++.+..++.++|||||||+||||++ |+.||.+....++...+. ...+...|..+++.
T Consensus       335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~  413 (454)
T 1qcf_A          335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEE  413 (454)
T ss_dssp             CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-HTCCCCCCTTSCHH
T ss_pred             CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            54322 1233456788999999999999999999999999999999 999999999888877764 44566678899999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +.+||.+||+.|   |.+||++++|++
T Consensus       414 l~~li~~cl~~d---p~~RPt~~~i~~  437 (454)
T 1qcf_A          414 LYNIMMRCWKNR---PEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHccCC---hhHCcCHHHHHH
Confidence            999999999999   999999999875


No 170
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2e-41  Score=358.77  Aligned_cols=250  Identities=18%  Similarity=0.241  Sum_probs=211.4

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLS  749 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~  749 (935)
                      +..++|++++.||+|+||.||+|++  +++.||||++......    ..+.+|+.+++.+ +|+||+++++++......+
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence            3457899999999999999999985  7889999998755322    2467899999999 8999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc-----EEEEeccccc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN-----VKVSDFGLSR  824 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~-----VKL~DFGlA~  824 (935)
                      +||||+ +++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.     +||+|||+++
T Consensus        83 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A           83 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence            999999 89999999876667999999999999999999999998  999999999999987766     9999999998


Q ss_pred             cccCCcc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhccc--
Q 002331          825 LKHNTFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMN---PMQVVGAVGFQN--  892 (935)
Q Consensus       825 ~~~~~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~---~~eil~~I~~~~--  892 (935)
                      .......       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..   ..+....+....  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  239 (298)
T 1csn_A          160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS  239 (298)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence            7654321       2345579999999999999999999999999999999999999998843   333333332221  


Q ss_pred             -cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          893 -RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       893 -~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                       ....+...+++.+.+||.+||+.|   |.+||++++|++.
T Consensus       240 ~~~~~~~~~~~~~l~~li~~~l~~d---p~~RP~~~~l~~~  277 (298)
T 1csn_A          240 TPLRELCAGFPEEFYKYMHYARNLA---FDATPDYDYLQGL  277 (298)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHCC---TTCCCCHHHHHHH
T ss_pred             ccHHHHHhhCcHHHHHHHHHHhcCC---cccCCCHHHHHHH
Confidence             112234578999999999999999   9999999998763


No 171
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=5.8e-42  Score=380.80  Aligned_cols=248  Identities=24%  Similarity=0.347  Sum_probs=195.7

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC------Cc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP------PN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~------~~  747 (935)
                      ++|++++.||+|+||.||+|.+  +|+.||||++............+.+|+.+|+.++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            7899999999999999999976  688999999877655556677888999999999999999999998654      56


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|+||||+ +++|.+++..  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus       109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            89999999 6799998875  46999999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR------------  894 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r------------  894 (935)
                      ..   .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......            
T Consensus       184 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          184 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             cc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            32   234679999999999987 67899999999999999999999999998876655543211100            


Q ss_pred             ---------cC--------CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 ---------LE--------IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 ---------~~--------ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                               ..        +...+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d---P~~R~t~~e~L~hp~  314 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD---SDKRITAAQALAHAY  314 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCC---cccCcCHHHHhcChh
Confidence                     00        11346789999999999999   999999999999998


No 172
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=2.5e-42  Score=364.75  Aligned_cols=247  Identities=23%  Similarity=0.374  Sum_probs=210.6

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEEC--C-------ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADWN--G-------TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV  742 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~~--g-------~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~  742 (935)
                      ++..++|++.+.||+|+||.||+|.+.  +       ..||+|++....  ......+.+|+.++++++||||+++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   81 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVC   81 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            355689999999999999999999763  2       469999986543  23356788999999999999999999999


Q ss_pred             ccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc--------
Q 002331          743 TRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN--------  814 (935)
Q Consensus       743 ~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~--------  814 (935)
                      .+.+..++||||+++++|.+++.+....+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.        
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCcccccccce
Confidence            9999999999999999999999876656999999999999999999999999  999999999999998877        


Q ss_pred             EEEEeccccccccCCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhccc
Q 002331          815 VKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATL-KLPWIGMNPMQVVGAVGFQN  892 (935)
Q Consensus       815 VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG-~~PF~~~~~~eil~~I~~~~  892 (935)
                      +||+|||++......    ....||+.|+|||++.+ ..++.++|||||||++|+|++| .+||...+........   .
T Consensus       160 ~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~---~  232 (289)
T 4fvq_A          160 IKLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY---E  232 (289)
T ss_dssp             EEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---H
T ss_pred             eeeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh---h
Confidence            999999998765432    12357889999999987 6789999999999999999995 5566666655544433   2


Q ss_pred             cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          893 RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       893 ~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ....++...++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       233 ~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~~  269 (289)
T 4fvq_A          233 DRHQLPAPKAAELANLINNCMDYE---PDHRPSFRAIIRD  269 (289)
T ss_dssp             TTCCCCCCSSCTTHHHHHHHSCSS---GGGSCCHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHcCCC---hhHCcCHHHHHHH
Confidence            345566777889999999999999   9999999999975


No 173
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=1.3e-41  Score=361.53  Aligned_cols=254  Identities=30%  Similarity=0.453  Sum_probs=211.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      .+..++|++.+.||+|+||.||+|++      .++.||||++.... .......+.+|+.+|+.++||||+++++++...
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED   95 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            34557799999999999999999984      67899999987543 222346788999999999999999999999876


Q ss_pred             --CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccc
Q 002331          746 --PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLS  823 (935)
Q Consensus       746 --~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA  823 (935)
                        ..+++||||+++++|.+++.+....+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++
T Consensus        96 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A           96 GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             --CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECccccc
Confidence              6689999999999999999765667999999999999999999999999  999999999999999999999999999


Q ss_pred             ccccCCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--------------ChHHHHH
Q 002331          824 RLKHNTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGM--------------NPMQVVG  886 (935)
Q Consensus       824 ~~~~~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~--------------~~~eil~  886 (935)
                      .......   .......||..|+|||++.+..++.++|||||||++|+|++|..||...              .......
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV  253 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred             ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence            8765432   2233456888899999999999999999999999999999999876432              1111222


Q ss_pred             HhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          887 AVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       887 ~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .......+...+..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~  295 (302)
T 4e5w_A          254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQ---PSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSS---GGGSCCHHHHHH
T ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHHcCCC---CCCCCCHHHHHH
Confidence            222344566678889999999999999999   999999999986


No 174
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=6.5e-42  Score=371.75  Aligned_cols=252  Identities=27%  Similarity=0.465  Sum_probs=210.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCc----eEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGT----EVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~----~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      +..++|++.+.||+|+||.||+|++  +++    +||+|.+.... .......+.+|+.++++++||||+++++++... 
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-   89 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-   89 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-
Confidence            3447899999999999999999986  343    35777765432 233456788999999999999999999999875 


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ..++||||+.+|+|.+++.+....+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            478999999999999999876678999999999999999999999998  999999999999999999999999999876


Q ss_pred             cCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          827 HNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       827 ~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      .....  ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....++...+. .......+..++.
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  246 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI  246 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence            43322  2233456789999999999999999999999999999999 999999988777666554 4445667788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+.+||.+||+.|   |.+||++.+|+++
T Consensus       247 ~~~~li~~~l~~~---p~~Rps~~ell~~  272 (327)
T 3poz_A          247 DVYMIMVKCWMID---ADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSC---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCC---hhhCCCHHHHHHH
Confidence            9999999999999   9999999999875


No 175
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.7e-41  Score=360.57  Aligned_cols=254  Identities=27%  Similarity=0.425  Sum_probs=216.3

Q ss_pred             ccCCCCCCeeEEE-EeeecCcEEEEEEEE----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          670 ECEIPWEDLVLGE-RIGLGSYGEVYHADW----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       670 ~~ei~~edy~I~e-~LG~G~fG~Vyka~~----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ++.+..++|.+.+ .||+|+||.||+|.+    .++.||||++............+.+|+.+++.++||||+++++++ .
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            3456678899998 999999999999954    357899999977655555677899999999999999999999999 5


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++.
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence            56789999999999999999763 46899999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCc
Q 002331          825 LKHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKE  900 (935)
Q Consensus       825 ~~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~  900 (935)
                      .......   ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||.+....++...+. ...+..++..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~  244 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAG  244 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTT
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCC
Confidence            7643321   1222346788999999998889999999999999999999 999999998887776664 3455677888


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +++.+.+||.+||+.|   |.+||++.+|++
T Consensus       245 ~~~~l~~li~~~l~~d---p~~Rps~~~l~~  272 (291)
T 1xbb_A          245 CPREMYDLMNLCWTYD---VENRPGFAAVEL  272 (291)
T ss_dssp             CCHHHHHHHHHHTCSS---TTTSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCCC---hhhCcCHHHHHH
Confidence            9999999999999999   999999999986


No 176
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=2.1e-41  Score=373.02  Aligned_cols=250  Identities=23%  Similarity=0.335  Sum_probs=210.4

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC-----Cce
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP-----PNL  748 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~-----~~l  748 (935)
                      .+|++++.||+|+||.||+|.+  +++.||||++.... .......+.+|+.+|++++||||+++++++...     ..+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            6899999999999999999986  57889999987543 344557788999999999999999999998654     368


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      |+||||+. ++|.+++..  ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++....
T Consensus       106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            99999997 499999875  35899999999999999999999999  99999999999999999999999999987653


Q ss_pred             Ccc---cCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------
Q 002331          829 TFL---SSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRR----------  894 (935)
Q Consensus       829 ~~~---~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r----------  894 (935)
                      ...   ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......          
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  260 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII  260 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence            321   1234579999999998754 55899999999999999999999999988766555443211000          


Q ss_pred             -------------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          895 -------------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       895 -------------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                         ..+...+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  316 (364)
T 3qyz_A          261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN---PHKRIEVEQALAHPY  316 (364)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSGG
T ss_pred             hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC---hhhCCCHHHHhcCcc
Confidence                               0112457899999999999999   999999999999998


No 177
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=5.8e-42  Score=363.38  Aligned_cols=251  Identities=28%  Similarity=0.456  Sum_probs=217.6

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ++|++.+.||+|+||.||+|++  +++.||||++............+.+|+.++++++||||+++++++.....+++|||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            6799999999999999999987  58899999997655444445678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC---CcEEEEeccccccccCCc
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN---WNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~---g~VKL~DFGlA~~~~~~~  830 (935)
                      |+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+   +.+||+|||++.......
T Consensus       102 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          102 LYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            99999999988653 36899999999999999999999999  9999999999999754   479999999998664432


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CcCcHHHHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP--KELDPLVARI  908 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip--~~ls~~L~dL  908 (935)
                       ......|++.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..++...+.........+  ..+++.+.+|
T Consensus       179 -~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (287)
T 2wei_A          179 -KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL  256 (287)
T ss_dssp             -SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHH
T ss_pred             -ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHH
Confidence             22334578899999998765 8899999999999999999999999998888777765444333333  5689999999


Q ss_pred             HHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          909 IWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       909 I~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |.+||+.|   |.+||++.++|+|||
T Consensus       257 i~~~l~~d---p~~Rps~~ell~hp~  279 (287)
T 2wei_A          257 IRKMLTFH---PSLRITATQCLEHPW  279 (287)
T ss_dssp             HHHHTCSS---GGGSCCHHHHHHSHH
T ss_pred             HHHHcccC---hhhCcCHHHHhcCHH
Confidence            99999999   999999999999998


No 178
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.1e-41  Score=364.15  Aligned_cols=258  Identities=22%  Similarity=0.341  Sum_probs=199.6

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ..+.+..++|++.+.||+|+||.||+|++  +++.||||++............+..+..+++.++||||+++++++...+
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT   97 (318)
T ss_dssp             SEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             hhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC
Confidence            34556678999999999999999999987  5889999999876544444445555666788889999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .+++||||+ ++.+..++.+....+++..++.++.||+.||.|||+. |  |+||||||+||||+.++.+||+|||++..
T Consensus        98 ~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A           98 DVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGR  174 (318)
T ss_dssp             EEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             cEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence            999999999 5567766655456799999999999999999999995 8  99999999999999999999999999976


Q ss_pred             ccCCcccCCCCCCCCCccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhccccccCCC-
Q 002331          826 KHNTFLSSKSTAGTPEWMAPEVLR-----NEPSNEKCDVYSFGVILWELATLKLPWIGM-NPMQVVGAVGFQNRRLEIP-  898 (935)
Q Consensus       826 ~~~~~~~~~s~~GT~~Y~APEvl~-----g~~~s~ksDIWSLG~ILyELLTG~~PF~~~-~~~eil~~I~~~~~r~~ip-  898 (935)
                      ..... ......|++.|+|||++.     +..++.++|||||||++|+|++|+.||... ...+....+. ...+..++ 
T Consensus       175 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~  252 (318)
T 2dyl_A          175 LVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL-QEEPPLLPG  252 (318)
T ss_dssp             -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-HSCCCCCCS
T ss_pred             ccCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh-ccCCCCCCc
Confidence            54432 223457899999999994     456789999999999999999999999874 4444444432 22333333 


Q ss_pred             -CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 -KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 -~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                       ..+++.+.+||.+||+.|   |.+||++.+|++|||
T Consensus       253 ~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~h~~  286 (318)
T 2dyl_A          253 HMGFSGDFQSFVKDCLTKD---HRKRPKYNKLLEHSF  286 (318)
T ss_dssp             SSCCCHHHHHHHHHHTCSC---TTTSCCHHHHTTSHH
T ss_pred             cCCCCHHHHHHHHHHccCC---hhHCcCHHHHhhCHH
Confidence             458999999999999999   999999999999998


No 179
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-42  Score=379.84  Aligned_cols=254  Identities=23%  Similarity=0.361  Sum_probs=213.0

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCC--CHHHHHHHHHHHHHHHHc-CCCceeeeeccccc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDF--SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTR  744 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~--~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~  744 (935)
                      +..++|++.+.||+|+||.||+|++     +++.||||++.....  .......+.+|+.+|+.+ +||||+++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  130 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  130 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence            3457899999999999999999987     688999999865321  111233466799999999 69999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .+.++|||||+++++|.+++... ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++
T Consensus       131 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          131 ETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             CceEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            99999999999999999999753 46899999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCC-cccCCCCCCCCCccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhccccccCC
Q 002331          825 LKHNT-FLSSKSTAGTPEWMAPEVLRNE--PSNEKCDVYSFGVILWELATLKLPWIGMN----PMQVVGAVGFQNRRLEI  897 (935)
Q Consensus       825 ~~~~~-~~~~~s~~GT~~Y~APEvl~g~--~~s~ksDIWSLG~ILyELLTG~~PF~~~~----~~eil~~I~~~~~r~~i  897 (935)
                      ..... .......+||+.|+|||++.+.  .++.++|||||||++|+|++|+.||....    ...+...+  ......+
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~  285 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--LKSEPPY  285 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--HHCCCCC
T ss_pred             ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH--hccCCCC
Confidence            65432 1223345799999999999863  47899999999999999999999997532    23333333  2345567


Q ss_pred             CCcCcHHHHHHHHHHHhhCCCCcCCCc-----CHHHHHhCcC
Q 002331          898 PKELDPLVARIIWECWQTGWSSLHIRT-----SQAQLSHKRF  934 (935)
Q Consensus       898 p~~ls~~L~dLI~qCL~~D~ssP~kRP-----Sa~EILqHPF  934 (935)
                      +..++..+.+||.+||..|   |.+||     +++++++|||
T Consensus       286 ~~~~~~~~~~li~~~L~~d---P~~R~~~~~~s~~ell~h~~  324 (355)
T 1vzo_A          286 PQEMSALAKDLIQRLLMKD---PKKRLGCGPRDADEIKEHLF  324 (355)
T ss_dssp             CTTSCHHHHHHHHHHTCSS---GGGSTTSSTTTHHHHHTSGG
T ss_pred             CcccCHHHHHHHHHHhhhC---HHHhcCCCCCCHHHHHcCcc
Confidence            7889999999999999999   99999     9999999998


No 180
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=3.7e-42  Score=372.89  Aligned_cols=252  Identities=25%  Similarity=0.434  Sum_probs=213.2

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCce----EEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTE----VAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~----VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      +..++|++.+.||+|+||.||+|++  +++.    ||+|++..... ......+.+|+.++++++||||+++++++. +.
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~   87 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS   87 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence            4557899999999999999999987  3443    77787654321 122335678999999999999999999886 46


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ..++||||+++|+|.+++......+++..++.|+.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++..
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence            789999999999999999876668999999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          827 HNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       827 ~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      .....  ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....++...+. ...+...+..++.
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  244 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-KGERLAQPQICTI  244 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-TTCBCCCCTTBCT
T ss_pred             CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCCCcCcH
Confidence            43321  2234567889999999999999999999999999999999 999999988777766654 4456667788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+.+||.+||+.|   |.+||++.+|+++
T Consensus       245 ~~~~li~~~l~~d---p~~Rps~~el~~~  270 (325)
T 3kex_A          245 DVYMVMVKCWMID---ENIRPTFKELANE  270 (325)
T ss_dssp             TTTHHHHHHTCSC---TTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            9999999999999   9999999999875


No 181
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=7e-43  Score=387.02  Aligned_cols=247  Identities=15%  Similarity=0.136  Sum_probs=198.8

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHH---HHHHcCCCceeeee------
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVK---IMRRLRHPNVVLFM------  739 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~---iL~~L~HPNIVkl~------  739 (935)
                      ....++|++.+.||+|+||.||+|++  +++.||||++..... .......+.+|+.   +|++++|||||+++      
T Consensus        69 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           69 GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             SCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC
T ss_pred             CCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh
Confidence            34457899999999999999999985  588999999975432 3345677889995   45555899999998      


Q ss_pred             -cccccCC-----------------ceEEEEeeCCCCCHHHHHcCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 002331          740 -GAVTRPP-----------------NLSIITEFLPRGSLFRILHRPH------CQVDEKRRIKMALDVARGMNCLHTSTP  795 (935)
Q Consensus       740 -g~~~~~~-----------------~l~LVmEy~~gGsL~dlL~~~~------~~lse~~il~Ia~QIa~AL~yLHs~g~  795 (935)
                       +++...+                 ..||||||+ +|+|.+++.+..      ..+++..++.|+.||+.||.|||++| 
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-  226 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-  226 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-
Confidence             4444432                 378999999 579999997532      12335888889999999999999999 


Q ss_pred             CEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCC-----------CCCchhHHHHHHH
Q 002331          796 TIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNE-----------PSNEKCDVYSFGV  864 (935)
Q Consensus       796 ~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~-----------~~s~ksDIWSLG~  864 (935)
                       |+||||||+||||+.++.+||+|||+++.....   .....| +.|+|||++.+.           .++.++|||||||
T Consensus       227 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 -LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             -EECSCCCGGGEEECTTCCEEECCGGGCEETTCE---EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             -eecCCCCHHHEEEcCCCCEEEEechhheecCCc---ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence             999999999999999999999999999864432   234567 999999999887           8999999999999


Q ss_pred             HHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          865 ILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       865 ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ++|||++|+.||.+.+.......+      ...+..+++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       302 il~elltg~~Pf~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~d---p~~Rpt~~e~l~hp~  362 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYP---KEDRLLPLQAMETPE  362 (377)
T ss_dssp             HHHHHHHSSCCC------CCSGGG------GSSCCCCCHHHHHHHHHHTCSS---GGGCCCHHHHHTSHH
T ss_pred             HHHHHHHCCCCCcccccccchhhh------hhhccCCCHHHHHHHHHHcCCC---chhCCCHHHHhhChH
Confidence            999999999999876654332222      2233678999999999999999   999999999999998


No 182
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3.9e-41  Score=366.12  Aligned_cols=251  Identities=25%  Similarity=0.332  Sum_probs=208.8

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC-----Cc
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP-----PN  747 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~-----~~  747 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++.... .......+.+|+.+++.++||||+++++++...     ..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            47899999999999999999987  48899999986433 344566788999999999999999999987654     67


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      .++||||+. ++|.+++..  ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++....
T Consensus        89 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            899999997 589999876  36899999999999999999999999  9999999999999999999999999998754


Q ss_pred             CCcc----------cCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-
Q 002331          828 NTFL----------SSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL-  895 (935)
Q Consensus       828 ~~~~----------~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~-  895 (935)
                      ....          ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+......+ 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH  243 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence            3211          1223578999999998765 678999999999999999999999999887655443321100000 


Q ss_pred             -----------------------------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 -----------------------------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 -----------------------------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                                   .....+++.+.+||.+||+.|   |.+||++.+||+|||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  308 (353)
T 2b9h_A          244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD---PAKRITAKEALEHPY  308 (353)
T ss_dssp             STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcC---cccCCCHHHHhcCcc
Confidence                                         112467899999999999999   999999999999998


No 183
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=3.6e-41  Score=368.59  Aligned_cols=247  Identities=24%  Similarity=0.355  Sum_probs=209.5

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc------
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN------  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~------  747 (935)
                      ++|.+.+.||+|+||.||+|.+  +|+.||||++............+.+|+.+++.++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            6899999999999999999987  58899999998766666667788999999999999999999999987654      


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +|+||||+. ++|.+++..   .+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus       104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            499999997 588887753   4899999999999999999999999  9999999999999999999999999998654


Q ss_pred             CCcccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc--------------
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN--------------  892 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~--------------  892 (935)
                      ..   .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+....              
T Consensus       178 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          178 AE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             CC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence            32   234578999999999987 678999999999999999999999999988766554432110              


Q ss_pred             ---------------cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 ---------------RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ---------------~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                     ....+...+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---p~~Rpt~~e~l~hp~  308 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD---VDKRLTAAQALTHPF  308 (353)
T ss_dssp             HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSC---TTTSCCHHHHHTSGG
T ss_pred             HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCC---cccCCCHHHHhcCcc
Confidence                           011233567899999999999999   999999999999998


No 184
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.6e-41  Score=367.14  Aligned_cols=252  Identities=31%  Similarity=0.563  Sum_probs=214.7

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCce--EEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTE--VAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~--VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~  747 (935)
                      +.+++|++.+.||+|+||.||+|++  ++..  ||||++.... .......+.+|+.+++++ +||||+++++++.+.+.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  100 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY  100 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence            5568999999999999999999975  5554  4899886432 233455688999999999 89999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC
Q 002331          748 LSIITEFLPRGSLFRILHRPH---------------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN  812 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~---------------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~  812 (935)
                      +++||||+++++|.+++.+..               ..+++..++.++.||+.||.|||++|  |+||||||+||||+.+
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~  178 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN  178 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGG
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCC
Confidence            999999999999999997643               46899999999999999999999999  9999999999999999


Q ss_pred             CcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 002331          813 WNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQ  891 (935)
Q Consensus       813 g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~  891 (935)
                      +.+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+. .
T Consensus       179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~  256 (327)
T 1fvr_A          179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-Q  256 (327)
T ss_dssp             GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-G
T ss_pred             CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh-c
Confidence            99999999998754322 22233457889999999999889999999999999999998 999999998888777664 3


Q ss_pred             ccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          892 NRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       892 ~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..+...+..+++.+.+||.+||+.|   |.+||++.+++++
T Consensus       257 ~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~~  294 (327)
T 1fvr_A          257 GYRLEKPLNCDDEVYDLMRQCWREK---PYERPSFAQILVS  294 (327)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCC---hhhCcCHHHHHHH
Confidence            3455677889999999999999999   9999999999875


No 185
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=8.4e-42  Score=359.95  Aligned_cols=249  Identities=32%  Similarity=0.564  Sum_probs=210.6

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc-CCce
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR-PPNL  748 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~-~~~l  748 (935)
                      .+.+..++|++.+.||+|+||.||+++++++.||||++....    ....+.+|+.++++++||||+++++++.. .+.+
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   90 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCce
Confidence            456778999999999999999999999999999999987543    34568899999999999999999998654 4579


Q ss_pred             EEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          749 SIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ++||||+++++|.+++.+.. ..+++..++.++.||+.||.|||+++  |+||||||+|||++.++.+||+|||++....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            99999999999999997532 23789999999999999999999999  9999999999999999999999999988654


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVA  906 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~  906 (935)
                      ..   .....+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+. ...+...+..+++.+.
T Consensus       169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  244 (278)
T 1byg_A          169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY  244 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCCCCCTTCCHHHH
T ss_pred             cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCcccCCHHHH
Confidence            33   223467889999999999999999999999999999998 999999988777776654 3445667888999999


Q ss_pred             HHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          907 RIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       907 dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ++|.+||+.|   |.+||++.+|++
T Consensus       245 ~li~~~l~~~---p~~Rps~~~l~~  266 (278)
T 1byg_A          245 EVMKNCWHLD---AAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHhcCC---hhhCCCHHHHHH
Confidence            9999999999   999999999986


No 186
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=4.3e-41  Score=357.46  Aligned_cols=250  Identities=30%  Similarity=0.463  Sum_probs=212.0

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEEC-----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc-ccCCce
Q 002331          675 WEDLVLGERIGLGSYGEVYHADWN-----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV-TRPPNL  748 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~~-----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~-~~~~~l  748 (935)
                      ..+|++.+.||+|+||.||+|++.     ...||||++... ........+.+|+.++++++||||+++++++ ..++..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            357999999999999999999762     225888987653 2445567789999999999999999999985 556678


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccC
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~  828 (935)
                      ++||||+++++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+|||++.++.+||+|||+++....
T Consensus       103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECcccccccccc
Confidence            9999999999999999877777899999999999999999999999  99999999999999999999999999986643


Q ss_pred             Cc----ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          829 TF----LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       829 ~~----~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ..    .......+|+.|+|||++.+..++.++|||||||++|+|++ |.+||...+..+....+. ...+...+..+++
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  259 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD  259 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCH
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCccCCH
Confidence            32    12233457789999999999999999999999999999999 677787777666655553 3445566788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .+.+||.+||+.|   |.+||++.+|++
T Consensus       260 ~l~~li~~~l~~~---p~~Rps~~ell~  284 (298)
T 3f66_A          260 PLYEVMLKCWHPK---AEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCC---hhhCcCHHHHHH
Confidence            9999999999999   999999999986


No 187
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.6e-41  Score=362.27  Aligned_cols=250  Identities=20%  Similarity=0.253  Sum_probs=210.2

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE---CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCC------ceeeeecccc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW---NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHP------NVVLFMGAVT  743 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~---~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HP------NIVkl~g~~~  743 (935)
                      +..++|++.+.||+|+||.||+|.+   +++.||||++...   ......+.+|+.+++.++|+      +|+++++++.
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence            3457899999999999999999976   5788999998643   34456788999999988655      5999999999


Q ss_pred             cCCceEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC-----------
Q 002331          744 RPPNLSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK-----------  811 (935)
Q Consensus       744 ~~~~l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~-----------  811 (935)
                      ..+.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.           
T Consensus        88 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           88 HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC---
T ss_pred             cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCcc
Confidence            999999999999 789999886543 46899999999999999999999999  999999999999987           


Q ss_pred             --------CCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 002331          812 --------NWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ  883 (935)
Q Consensus       812 --------~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e  883 (935)
                              ++.+||+|||+++.....   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                    678999999999865432   234678999999999999999999999999999999999999999887765


Q ss_pred             HHHHhhccccc------------------------------------------cCCCCcCcHHHHHHHHHHHhhCCCCcC
Q 002331          884 VVGAVGFQNRR------------------------------------------LEIPKELDPLVARIIWECWQTGWSSLH  921 (935)
Q Consensus       884 il~~I~~~~~r------------------------------------------~~ip~~ls~~L~dLI~qCL~~D~ssP~  921 (935)
                      ....+......                                          ...+...++.+.+||.+||+.|   |.
T Consensus       242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d---P~  318 (339)
T 1z57_A          242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD---PA  318 (339)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS---TT
T ss_pred             HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC---cc
Confidence            54433111000                                          0112334678999999999999   99


Q ss_pred             CCcCHHHHHhCcC
Q 002331          922 IRTSQAQLSHKRF  934 (935)
Q Consensus       922 kRPSa~EILqHPF  934 (935)
                      +||++.|||+|||
T Consensus       319 ~Rpt~~ell~hp~  331 (339)
T 1z57_A          319 KRITLREALKHPF  331 (339)
T ss_dssp             TSCCHHHHTTSGG
T ss_pred             cccCHHHHhcCHH
Confidence            9999999999998


No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=6.8e-42  Score=386.32  Aligned_cols=252  Identities=22%  Similarity=0.349  Sum_probs=200.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC------HHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS------GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~------~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++......      ......+.+|+.+|++++||||+++++++.. +
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            36899999999999999999987  5789999998765321      1223357899999999999999999999865 4


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC---CcEEEEecccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN---WNVKVSDFGLS  823 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~---g~VKL~DFGlA  823 (935)
                      .+++||||+++++|.+++.+. ..+++..++.|+.||+.||.|||+++  |+||||||+||||+.+   +.+||+|||++
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecccc
Confidence            589999999999999998764 47999999999999999999999999  9999999999999754   45999999999


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccc--ccCC
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRN---EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ-VVGAVGFQNR--RLEI  897 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g---~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e-il~~I~~~~~--r~~i  897 (935)
                      +...... .....+||+.|+|||++.+   ..++.++|||||||++|+|++|+.||....... +...+.....  .+..
T Consensus       290 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~  368 (419)
T 3i6u_A          290 KILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV  368 (419)
T ss_dssp             TSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHH
T ss_pred             eecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchh
Confidence            8765432 2345679999999999864   567889999999999999999999998754322 2222221111  1112


Q ss_pred             CCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          898 PKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       898 p~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...+++.+.+||.+||+.|   |.+||+++++|+|||
T Consensus       369 ~~~~~~~~~~li~~~L~~d---P~~Rps~~e~l~hp~  402 (419)
T 3i6u_A          369 WAEVSEKALDLVKKLLVVD---PKARFTTEEALRHPW  402 (419)
T ss_dssp             HTTSCHHHHHHHHHHSCSS---TTTSCCHHHHHHSGG
T ss_pred             hcccCHHHHHHHHHHccCC---hhHCcCHHHHhCCcc
Confidence            2568899999999999999   999999999999999


No 189
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.5e-41  Score=392.03  Aligned_cols=254  Identities=34%  Similarity=0.572  Sum_probs=224.0

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ..+++..++|++.+.||+|+||.||+|.+.  +..||||++......   ...|.+|+.+|++++|||||++++++....
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  289 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREP  289 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            456788899999999999999999999884  788999998765432   457889999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .++|||||+++|+|.+++.+. ...+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++.
T Consensus       290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeeccccee
Confidence            999999999999999999753 356899999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          826 KHNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       826 ~~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ...... ......++..|+|||++.+..++.++|||||||+||||++ |..||.+.+..++...+. ...+...|..+++
T Consensus       368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  446 (495)
T 1opk_A          368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE  446 (495)
T ss_dssp             CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCCH
T ss_pred             ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCH
Confidence            654322 2233456778999999999899999999999999999999 999999988877766653 4556677889999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .+.+||.+||+.|   |.+||++.+|++
T Consensus       447 ~l~~li~~cl~~d---P~~RPs~~el~~  471 (495)
T 1opk_A          447 KVYELMRACWQWN---PSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCcC---hhHCcCHHHHHH
Confidence            9999999999999   999999999976


No 190
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=1.5e-42  Score=383.16  Aligned_cols=251  Identities=13%  Similarity=0.062  Sum_probs=192.1

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC-HHHHHHHHHHHHHHHHc--CCCceeeeeccc-------
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS-GAALLEFKREVKIMRRL--RHPNVVLFMGAV-------  742 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L--~HPNIVkl~g~~-------  742 (935)
                      ..+|++.+.||+|+||.||+|++  +++.||||++...... ......+.+|+.+++.|  +||||++++..+       
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            35699999999999999999986  5889999999887653 34556677886655555  699988866433       


Q ss_pred             ccC-----------------CceEEEEeeCCCCCHHHHHcCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCEEe
Q 002331          743 TRP-----------------PNLSIITEFLPRGSLFRILHRPHCQVDEKRR------IKMALDVARGMNCLHTSTPTIVH  799 (935)
Q Consensus       743 ~~~-----------------~~l~LVmEy~~gGsL~dlL~~~~~~lse~~i------l~Ia~QIa~AL~yLHs~g~~IIH  799 (935)
                      ...                 ..+||||||++ ++|.+++...+..+.+..+      +.++.||+.||.|||++|  |+|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivH  217 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVH  217 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--Ccc
Confidence            221                 33899999998 7999999764444555555      678899999999999999  999


Q ss_pred             eCCCCCCeeecCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002331          800 RDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRN--EPSNEKCDVYSFGVILWELATLKLPWI  877 (935)
Q Consensus       800 rDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g--~~~s~ksDIWSLG~ILyELLTG~~PF~  877 (935)
                      |||||+||||+.++.+||+|||+++......   ....+|+.|+|||++.+  ..++.++|||||||++|+|++|+.||.
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG---PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCEE---EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCCc---cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999998765432   13456799999999987  678999999999999999999999998


Q ss_pred             CCChHHHHH--H---hhcccccc--CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          878 GMNPMQVVG--A---VGFQNRRL--EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       878 ~~~~~eil~--~---I~~~~~r~--~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +..+.....  .   ........  ..+..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  355 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFD---RRRRLLPLEAMETPE  355 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSS---TTTCCCHHHHTTSHH
T ss_pred             CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCC---hhhCCCHHHHhcCHH
Confidence            874431110  0   00011122  223578999999999999999   999999999999998


No 191
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=4.9e-41  Score=359.57  Aligned_cols=254  Identities=24%  Similarity=0.435  Sum_probs=204.3

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|++.+.||+|+||.||+|.+  +++.||||++..... .......+.+|+.+++.++||||+++++++...+.+++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            446899999999999999999986  688999999976433 44566788999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          751 ITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ||||+++++|.+++..   ....+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++....
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999999863   3456899999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--ChHHHHHHhhccccccCCCCcCcHHH
Q 002331          828 NTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGM--NPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       828 ~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~--~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                      ..........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.  +.......+.....+...+..+++.+
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL  267 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence            4433334567899999999999999999999999999999999999999764  33444444433333333346789999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+||.+||..|   |.+||++.+|+++
T Consensus       268 ~~li~~~l~~d---p~~Rps~~~il~~  291 (310)
T 2wqm_A          268 RQLVNMCINPD---PEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCC---hhhCCCHHHHHHH
Confidence            99999999999   9999999999874


No 192
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=8.3e-42  Score=369.33  Aligned_cols=256  Identities=27%  Similarity=0.435  Sum_probs=217.3

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      ++..++|++++.||+|+||.||+|++       .++.||||++... ........+.+|+.++++++||||+++++++..
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  104 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence            45668999999999999999999973       4567999998644 344556678899999999999999999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcE
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPH------CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNV  815 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~------~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~V  815 (935)
                      ....|+||||+++++|.+++....      ..+++..++.++.||+.||.|||++|  |+||||||+||||+.   +..+
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceE
Confidence            999999999999999999997533      35889999999999999999999999  999999999999984   4569


Q ss_pred             EEEeccccccccCCcc--cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 002331          816 KVSDFGLSRLKHNTFL--SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQN  892 (935)
Q Consensus       816 KL~DFGlA~~~~~~~~--~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~  892 (935)
                      ||+|||++........  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+. ..
T Consensus       183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~  261 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG  261 (327)
T ss_dssp             EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred             EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh-cC
Confidence            9999999976533221  1223467889999999999999999999999999999998 999999988877776664 34


Q ss_pred             cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 ~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .....+..+++.+.+||.+||+.|   |.+||++.+|+++.|
T Consensus       262 ~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~~l~  300 (327)
T 2yfx_A          262 GRMDPPKNCPGPVYRIMTQCWQHQ---PEDRPNFAIILERIE  300 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCC---hhhCcCHHHHHHHHH
Confidence            456677889999999999999999   999999999999865


No 193
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=7.7e-42  Score=368.83  Aligned_cols=251  Identities=23%  Similarity=0.360  Sum_probs=203.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCC------HHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFS------GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~------~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ++|++.+.||+|+||.||+|.+  +++.||||++......      ......+.+|+.+|+.++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            5799999999999999999987  5789999998764321      122345789999999999999999999987654 


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc---EEEEeccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN---VKVSDFGLSR  824 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~---VKL~DFGlA~  824 (935)
                      +|+||||+++++|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.   +||+|||+++
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            89999999999999998763 57899999999999999999999999  999999999999987654   9999999998


Q ss_pred             cccCCcccCCCCCCCCCccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccc--ccCCC
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLR---NEPSNEKCDVYSFGVILWELATLKLPWIGMNPM-QVVGAVGFQNR--RLEIP  898 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~---g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~-eil~~I~~~~~--r~~ip  898 (935)
                      ....... .....||+.|+|||++.   +..++.++|||||||++|+|++|..||...... .+...+.....  ....+
T Consensus       166 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T 2ycf_A          166 ILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW  244 (322)
T ss_dssp             ECCCCHH-HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred             ecccccc-cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence            7654321 12346899999999974   466889999999999999999999999865432 22222211111  11223


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       245 ~~~~~~~~~li~~~l~~d---P~~Rps~~~~l~h~~  277 (322)
T 2ycf_A          245 AEVSEKALDLVKKLLVVD---PKARFTTEEALRHPW  277 (322)
T ss_dssp             TTSCHHHHHHHHHHSCSS---TTTSCCHHHHHTSGG
T ss_pred             hhcCHHHHHHHHHHcccC---HhhCCCHHHHhhCcC
Confidence            567899999999999999   999999999999998


No 194
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.6e-41  Score=362.70  Aligned_cols=256  Identities=20%  Similarity=0.284  Sum_probs=214.8

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC--CCceeeeecccccCCc
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR--HPNVVLFMGAVTRPPN  747 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~--HPNIVkl~g~~~~~~~  747 (935)
                      +.+..++|++.+.||+|+||.||++.+ +++.||||++............+.+|+.++++++  |+||+++++++...+.
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~  102 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY  102 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence            456668899999999999999999976 5778999999877667777888999999999996  5999999999999999


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +++||| +.+++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||||++ +.+||+|||++....
T Consensus       103 ~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQ  177 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred             EEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeecccccccc
Confidence            999999 5578999999764 47899999999999999999999998  999999999999964 899999999998764


Q ss_pred             CCcc--cCCCCCCCCCccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccc
Q 002331          828 NTFL--SSKSTAGTPEWMAPEVLRN-----------EPSNEKCDVYSFGVILWELATLKLPWIGMNP-MQVVGAVGFQNR  893 (935)
Q Consensus       828 ~~~~--~~~s~~GT~~Y~APEvl~g-----------~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~-~eil~~I~~~~~  893 (935)
                      ....  ......|++.|+|||++.+           ..++.++|||||||++|+|++|..||..... ......+.....
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  257 (313)
T 3cek_A          178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH  257 (313)
T ss_dssp             ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred             CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence            3321  1234578999999999876           4678899999999999999999999987543 333444444445


Q ss_pred             ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...++...+..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~h~~  295 (313)
T 3cek_A          258 EIEFPDIPEKDLQDVLKCCLKRD---PKQRISIPELLAHPY  295 (313)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             ccCCcccchHHHHHHHHHHccCC---cccCcCHHHHhcCcc
Confidence            56677888999999999999999   999999999999998


No 195
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.6e-41  Score=354.78  Aligned_cols=249  Identities=31%  Similarity=0.532  Sum_probs=212.8

Q ss_pred             CeeEEEEeeecCcEEEEEEEE--CC---ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCce-EE
Q 002331          677 DLVLGERIGLGSYGEVYHADW--NG---TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNL-SI  750 (935)
Q Consensus       677 dy~I~e~LG~G~fG~Vyka~~--~g---~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l-~L  750 (935)
                      .|.+.++||+|+||.||+|++  ++   ..||||++.... .......+.+|+.+++.++||||+++++++.+.+.. ++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            466789999999999999976  22   269999886533 445667889999999999999999999999876665 99


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+.+++|.+++......+++..++.|+.||+.||.|||++|  |+||||||+|||++.++.+||+|||+++......
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            99999999999999887778999999999999999999999999  9999999999999999999999999998654321


Q ss_pred             ----ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhccccccCCCCcCcHHH
Q 002331          831 ----LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATL-KLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLV  905 (935)
Q Consensus       831 ----~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG-~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L  905 (935)
                          .......+++.|+|||++.+..++.++|||||||++|+|++| .+||...+..+....+. .......+..+++.+
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  257 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSL  257 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCccchHHH
Confidence                222345678899999999999999999999999999999995 55666777666665553 444566778899999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+||.+||+.|   |.+||++.++++.
T Consensus       258 ~~li~~~l~~~---p~~Rps~~~ll~~  281 (298)
T 3pls_A          258 YQVMQQCWEAD---PAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHccCC---hhhCcCHHHHHHH
Confidence            99999999999   9999999999863


No 196
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.8e-41  Score=367.61  Aligned_cols=246  Identities=17%  Similarity=0.251  Sum_probs=207.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++......    ..+.+|+.+++.+ +||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence            47899999999999999999985  6889999998765432    2477899999999 999999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc-----EEEEeccccccc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN-----VKVSDFGLSRLK  826 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~-----VKL~DFGlA~~~  826 (935)
                      |||+ +++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.     +||+|||+++..
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            9999 89999999865668999999999999999999999999  999999999999998887     999999999876


Q ss_pred             cCCcc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhccccccC
Q 002331          827 HNTFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP---MQVVGAVGFQNRRLE  896 (935)
Q Consensus       827 ~~~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~---~eil~~I~~~~~r~~  896 (935)
                      .....       ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+...   .+....+........
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~  240 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP  240 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence            44321       12456899999999999999999999999999999999999999998543   333333321111111


Q ss_pred             ---CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          897 ---IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       897 ---ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                         +...++ .+.+||.+||..|   |.+||++++|++
T Consensus       241 ~~~~~~~~p-~~~~li~~~l~~~---p~~RP~~~~l~~  274 (330)
T 2izr_A          241 IEVLCENFP-EMATYLRYVRRLD---FFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHTTTCH-HHHHHHHHHHHCC---TTCCCCHHHHHH
T ss_pred             HHHHhccCh-HHHHHHHHHHhCC---CCCCCCHHHHHH
Confidence               123355 9999999999999   999999999876


No 197
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.1e-41  Score=359.67  Aligned_cols=255  Identities=32%  Similarity=0.519  Sum_probs=211.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEEC---Cc--eEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADWN---GT--EVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~~---g~--~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      .+..++|++.+.||+|+||.||+|++.   ++  .||||++..... .......+.+|+.++++++||||+++++++...
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   93 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence            345578999999999999999999852   22  589998876543 234567889999999999999999999999876


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      . .++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.+||+|||++..
T Consensus        94 ~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           94 P-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             S-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             C-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEcccccccc
Confidence            5 89999999999999999765567999999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcC
Q 002331          826 KHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       826 ~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~l  901 (935)
                      ......   ......++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+.....+...+..+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC  250 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTC
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCc
Confidence            643321   1233457788999999999889999999999999999999 999999999888888776666666777889


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +..+.++|.+||..|   |.+||++.+|+++
T Consensus       251 ~~~l~~li~~~l~~~---p~~Rps~~~l~~~  278 (291)
T 1u46_A          251 PQDIYNVMVQCWAHK---PEDRPTFVALRDF  278 (291)
T ss_dssp             CHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCC---cccCcCHHHHHHH
Confidence            999999999999999   9999999999874


No 198
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=5.4e-41  Score=361.44  Aligned_cols=245  Identities=29%  Similarity=0.590  Sum_probs=204.2

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEE
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVm  752 (935)
                      +..++|++.+.||+|+||.||++++.++.||||++...    .....+.+|+.+|++++||||+++++++.+  ..++||
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~   78 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM   78 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence            45678999999999999999999999999999998543    245678899999999999999999999874  489999


Q ss_pred             eeCCCCCHHHHHcCCCC--CCCHHHHHHHHHHHHHHHHHHHh---cCCCEEeeCCCCCCeeecCCCc-EEEEeccccccc
Q 002331          753 EFLPRGSLFRILHRPHC--QVDEKRRIKMALDVARGMNCLHT---STPTIVHRDLKSPNLLVDKNWN-VKVSDFGLSRLK  826 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~--~lse~~il~Ia~QIa~AL~yLHs---~g~~IIHrDLKPeNILLd~~g~-VKL~DFGlA~~~  826 (935)
                      ||+++++|.+++.....  .+++..++.++.||+.||.|||+   ++  |+||||||+||||+.++. +||+|||++...
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A           79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA--LIHRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC--CCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC--eecCCCChhHEEEeCCCCEEEEccccccccc
Confidence            99999999999976432  47889999999999999999999   66  999999999999998886 799999999765


Q ss_pred             cCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHhhccccccCCCCcCcHH
Q 002331          827 HNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP--MQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       827 ~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~--~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ...   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....  ......+ ....+..++..+++.
T Consensus       157 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  232 (307)
T 2eva_A          157 QTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP  232 (307)
T ss_dssp             -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH-HTTCCCCCBTTCCHH
T ss_pred             ccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH-hcCCCCCcccccCHH
Confidence            432   2234689999999999999999999999999999999999999986533  2233333 234456667889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+||.+||+.|   |.+||++.+|+++
T Consensus       233 l~~li~~~l~~d---p~~Rps~~ell~~  257 (307)
T 2eva_A          233 IESLMTRCWSKD---PSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCC---hhhCcCHHHHHHH
Confidence            999999999999   9999999999873


No 199
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.8e-41  Score=359.89  Aligned_cols=250  Identities=21%  Similarity=0.311  Sum_probs=203.5

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc---------
Q 002331          675 WEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT---------  743 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~---------  743 (935)
                      .++|++++.||+|+||.||+|.+.  ++.||||++....  ......+.+|+.++++++||||+++++++.         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            378999999999999999999874  8899999987543  455677899999999999999999998863         


Q ss_pred             -----cCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEE
Q 002331          744 -----RPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKV  817 (935)
Q Consensus       744 -----~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL  817 (935)
                           +...+++||||++ ++|.+++.+  ..+++..++.++.||+.||.|||++|  |+||||||+||||+ .++.+||
T Consensus        88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             ---CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEEE
T ss_pred             cccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEEE
Confidence                 4467899999997 599999975  46899999999999999999999999  99999999999997 5779999


Q ss_pred             EeccccccccCCc---ccCCCCCCCCCccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc
Q 002331          818 SDFGLSRLKHNTF---LSSKSTAGTPEWMAPEVLRN-EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR  893 (935)
Q Consensus       818 ~DFGlA~~~~~~~---~~~~s~~GT~~Y~APEvl~g-~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~  893 (935)
                      +|||+++......   .......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus       163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  242 (320)
T 2i6l_A          163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP  242 (320)
T ss_dssp             CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred             ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999998754321   11233467999999998865 6789999999999999999999999999887665554421110


Q ss_pred             c----------------------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 R----------------------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 r----------------------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .                            ..++..++..+.+||.+||+.|   |.+||++.++|+|||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  308 (320)
T 2i6l_A          243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFS---PMDRLTAEEALSHPY  308 (320)
T ss_dssp             CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSS---GGGSCCHHHHHTSHH
T ss_pred             CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCC---ccccCCHHHHhCCcc
Confidence            0                            0122467899999999999999   999999999999998


No 200
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.8e-41  Score=357.90  Aligned_cols=248  Identities=25%  Similarity=0.387  Sum_probs=202.6

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc---------
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR---------  744 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~---------  744 (935)
                      ++|++++.||+|+||.||+|++  +++.||||++...   ......+.+|+.++++++||||+++++++.+         
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            4799999999999999999986  6889999998643   3456778899999999999999999998754         


Q ss_pred             ----CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEec
Q 002331          745 ----PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDF  820 (935)
Q Consensus       745 ----~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DF  820 (935)
                          ...+++||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~df  160 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDF  160 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEeeC
Confidence                45689999999999999999866667889999999999999999999999  999999999999999999999999


Q ss_pred             cccccccCCc--------------ccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHH
Q 002331          821 GLSRLKHNTF--------------LSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGM-NPMQV  884 (935)
Q Consensus       821 GlA~~~~~~~--------------~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~-~~~ei  884 (935)
                      |++.......              .......|++.|+|||++.+. .++.++|||||||++|+|++   ||... +....
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~  237 (303)
T 1zy4_A          161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI  237 (303)
T ss_dssp             CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred             cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence            9998654221              122345689999999999865 68999999999999999998   55533 33333


Q ss_pred             HHHhhcc--ccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          885 VGAVGFQ--NRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       885 l~~I~~~--~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...+...  ..+..++...++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d---p~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD---PNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSS---GGGSCCHHHHHHSSC
T ss_pred             HHhccccccccCccccccchHHHHHHHHHHHhcC---cccCcCHHHHhCCCC
Confidence            4333221  2233455667888999999999999   999999999999999


No 201
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.2e-41  Score=380.92  Aligned_cols=246  Identities=23%  Similarity=0.295  Sum_probs=202.2

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc------CCc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR------PPN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~------~~~  747 (935)
                      .+|++++.||+|+||.||+|++  +++.||||++.....      .+.+|+++|+.++|||||+++++|..      ...
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            4699999999999999999988  588999999865421      23479999999999999999998843      223


Q ss_pred             eEEEEeeCCCCCHHHHHc---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC-CcEEEEecccc
Q 002331          748 LSIITEFLPRGSLFRILH---RPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN-WNVKVSDFGLS  823 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~---~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~-g~VKL~DFGlA  823 (935)
                      +++||||+++ +|.+++.   +....+++..++.|+.||+.||.|||++|  |+||||||+||||+.+ +.+||+|||++
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchhh
Confidence            7799999976 6666553   23457999999999999999999999999  9999999999999955 67899999999


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN----------  892 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~----------  892 (935)
                      +..... .......||+.|+|||++.+. .++.++|||||||+||||++|+.||.+.+..+.+..+....          
T Consensus       205 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          205 KQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             EECCTT-CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             hhcccC-CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            876443 223456789999999999765 68999999999999999999999999987665544332110          


Q ss_pred             -----cccC------------CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          893 -----RRLE------------IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       893 -----~r~~------------ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                           ....            ++..+++++.+||.+||..|   |.+||++.|+|+|||
T Consensus       284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~d---P~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT---PTARLTPLEACAHSF  339 (420)
T ss_dssp             HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSS---GGGSCCHHHHHTSGG
T ss_pred             hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCC---hhHCCCHHHHhCCHh
Confidence                 0111            23467899999999999999   999999999999998


No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=8e-41  Score=378.99  Aligned_cols=248  Identities=23%  Similarity=0.261  Sum_probs=209.6

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc------CCCceeeeecccccCC
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL------RHPNVVLFMGAVTRPP  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L------~HPNIVkl~g~~~~~~  746 (935)
                      ..+|++++.||+|+||.||+|.+  .++.||||++...   ......+.+|+.+++.+      +|+||+++++++...+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            36799999999999999999977  5789999998653   33455677888888877      5779999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc--EEEEecccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN--VKVSDFGLS  823 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~--VKL~DFGlA  823 (935)
                      .+++||||+. ++|.+++.... ..+++..++.|+.||+.||.|||+++  ||||||||+||||+.++.  +||+|||++
T Consensus       173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            9999999996 58998886543 45899999999999999999999999  999999999999999887  999999999


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRL--------  895 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~--------  895 (935)
                      +.....   .....||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+......+        
T Consensus       250 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~  326 (429)
T 3kvw_A          250 CYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDAS  326 (429)
T ss_dssp             EETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTB
T ss_pred             eecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence            765433   234679999999999999999999999999999999999999999988766554432110000        


Q ss_pred             -------------------------------------------------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCH
Q 002331          896 -------------------------------------------------EIPKELDPLVARIIWECWQTGWSSLHIRTSQ  926 (935)
Q Consensus       896 -------------------------------------------------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa  926 (935)
                                                                       .++...++.+.+||.+||+.|   |.+|||+
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~d---P~~Rpta  403 (429)
T 3kvw_A          327 KRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWD---PAVRMTP  403 (429)
T ss_dssp             TTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSS---TTTSCCH
T ss_pred             hhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCC---hhhCCCH
Confidence                                                             011234788999999999999   9999999


Q ss_pred             HHHHhCcC
Q 002331          927 AQLSHKRF  934 (935)
Q Consensus       927 ~EILqHPF  934 (935)
                      .|+|+|||
T Consensus       404 ~e~L~Hpw  411 (429)
T 3kvw_A          404 GQALRHPW  411 (429)
T ss_dssp             HHHHTSTT
T ss_pred             HHHhCChh
Confidence            99999999


No 203
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.9e-41  Score=366.05  Aligned_cols=257  Identities=26%  Similarity=0.403  Sum_probs=191.6

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHH-HHHHcCCCceeeeecccccC
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVK-IMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~-iL~~L~HPNIVkl~g~~~~~  745 (935)
                      ..+++..++|++.+.||+|+||.||+|.+  +++.||||++..... ......+.+|+. +++.++||||+++++++...
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~   93 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE   93 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence            45678889999999999999999999987  488999999976543 334445556665 66677999999999999999


Q ss_pred             CceEEEEeeCCCCCHHHHHcC----CCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeecCCCcEEEEec
Q 002331          746 PNLSIITEFLPRGSLFRILHR----PHCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVDKNWNVKVSDF  820 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~----~~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd~~g~VKL~DF  820 (935)
                      +..++||||+++ +|.+++..    ....+++..++.++.|++.||.|||+. |  |+||||||+||||+.++.+||+||
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Df  170 (327)
T 3aln_A           94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDF  170 (327)
T ss_dssp             SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCC
T ss_pred             CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccC
Confidence            999999999975 78777652    345789999999999999999999998 8  999999999999999999999999


Q ss_pred             cccccccCCcccCCCCCCCCCccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccc
Q 002331          821 GLSRLKHNTFLSSKSTAGTPEWMAPEVL----RNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM-QVVGAVGFQNRRL  895 (935)
Q Consensus       821 GlA~~~~~~~~~~~s~~GT~~Y~APEvl----~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~-eil~~I~~~~~r~  895 (935)
                      |+++...... ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||...... +....+ ......
T Consensus       171 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~  248 (327)
T 3aln_A          171 GISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV-VKGDPP  248 (327)
T ss_dssp             SSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC-CCSCCC
T ss_pred             CCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH-hcCCCC
Confidence            9998765432 22334789999999998    4566899999999999999999999999876432 222222 122222


Q ss_pred             CCC----CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 EIP----KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ~ip----~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .++    ..+++.+.+||.+||+.|   |.+||++.+|++|||
T Consensus       249 ~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~ell~hp~  288 (327)
T 3aln_A          249 QLSNSEEREFSPSFINFVNLCLTKD---ESKRPKYKELLKHPF  288 (327)
T ss_dssp             CCCCCSSCCCCHHHHHHHHHHTCSS---GGGSCCHHHHTTSHH
T ss_pred             CCCCcccccCCHHHHHHHHHHhhCC---hhhCcCHHHHHhChH
Confidence            222    468899999999999999   999999999999998


No 204
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=2.2e-41  Score=365.95  Aligned_cols=253  Identities=27%  Similarity=0.435  Sum_probs=214.6

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc--c
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT--R  744 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~--~  744 (935)
                      +..++|++.+.||+|+||.||+|++      .++.||||++....  ......+.+|+.++++++||||+++++++.  .
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   97 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPG   97 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence            4457899999999999999999984      57789999987553  445667899999999999999999999876  4


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ...+++||||+++++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||++.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEcccccce
Confidence            55689999999999999999765557999999999999999999999998  9999999999999999999999999998


Q ss_pred             cccCCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--------------HHHHH
Q 002331          825 LKHNTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM--------------QVVGA  887 (935)
Q Consensus       825 ~~~~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~--------------eil~~  887 (935)
                      ......   .......+|+.|+|||++.+..++.++|||||||++|+|++|..||......              .....
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE  255 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred             ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence            764322   1233456788899999999998999999999999999999999998754332              11222


Q ss_pred             hhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          888 VGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       888 I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ......+...+..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~ell~~  297 (327)
T 3lxl_A          256 LLEEGQRLPAPPACPAEVHELMKLCWAPS---PQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HhhcccCCCCCCcccHHHHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            22344556678889999999999999999   9999999999764


No 205
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=3.5e-41  Score=384.05  Aligned_cols=253  Identities=32%  Similarity=0.546  Sum_probs=216.7

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECC-ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNG-TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..+++..++|++.+.||+|+||.||+|.+.+ ..||||++......   .+.+.+|+.+|++++||||+++++++.+ +.
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence            4467888999999999999999999999864 57999998765433   3568899999999999999999999876 67


Q ss_pred             eEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ++|||||+++|+|.+++... ...+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLI  330 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceec
Confidence            89999999999999999642 345899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          827 HNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       827 ~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..... ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+....++...+. ...+...|..+++.
T Consensus       331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~  409 (452)
T 1fmk_A          331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPES  409 (452)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHH
T ss_pred             CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            54322 1223456788999999999999999999999999999999 999999999888877764 44566778899999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +.+||.+||+.|   |.+||++++|++
T Consensus       410 l~~li~~cl~~d---P~~Rpt~~~l~~  433 (452)
T 1fmk_A          410 LHDLMCQCWRKE---PEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             HHHHHHHHccCC---hhhCcCHHHHHH
Confidence            999999999999   999999999876


No 206
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.7e-41  Score=367.80  Aligned_cols=252  Identities=27%  Similarity=0.471  Sum_probs=209.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCce----EEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTE----VAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~----VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      +..++|++.+.||+|+||.||+|.+  +++.    ||+|.+.... .......+.+|+.++++++||||+++++++....
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            4457899999999999999999987  4444    5777665432 2234567889999999999999999999998754


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                       .++||||+.+++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++..
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence             88999999999999999876678999999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcH
Q 002331          827 HNTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDP  903 (935)
Q Consensus       827 ~~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~  903 (935)
                      ....  .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....++...+. .......+..++.
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  246 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI  246 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence            4322  12233456788999999999999999999999999999999 999999988877766554 4455667788999


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+.+||.+||+.|   |.+||++.+|++.
T Consensus       247 ~l~~li~~~l~~d---p~~Rps~~ell~~  272 (327)
T 3lzb_A          247 DVYMIMRKCWMID---ADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCC---hhHCcCHHHHHHH
Confidence            9999999999999   9999999999863


No 207
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=5.1e-41  Score=375.91  Aligned_cols=248  Identities=23%  Similarity=0.259  Sum_probs=202.6

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC------c
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP------N  747 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~------~  747 (935)
                      ..+|.+.+.||+|+||.||+|++ .+..||+|++......      ..+|+.+|+.++||||++++++|....      .
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            35799999999999999999987 4566999988654321      236999999999999999999985433      3


Q ss_pred             eEEEEeeCCCCCHHHHHc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEEEeccccc
Q 002331          748 LSIITEFLPRGSLFRILH--RPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSDFGLSR  824 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~--~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~DFGlA~  824 (935)
                      +++||||++++.+..+..  .....+++..++.|+.||+.||.|||++|  |+||||||+||||+ .++.+||+|||+++
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~  190 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAK  190 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence            889999998754433321  23457899999999999999999999999  99999999999999 79999999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR----------  893 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~----------  893 (935)
                      ..... .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.....          
T Consensus       191 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~  269 (394)
T 4e7w_A          191 ILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM  269 (394)
T ss_dssp             ECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             cccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            76443 223456789999999999775 489999999999999999999999999887665544321100          


Q ss_pred             -----c------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 -----R------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 -----r------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                           .            ..++..+++++.+||.+||+.|   |.+||++.++++|||
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~R~t~~e~l~hp~  324 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT---PSARLTAIEALCHPF  324 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS---GGGSCCHHHHHTSGG
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC---hhhCCCHHHHhcChh
Confidence                 0            0133458899999999999999   999999999999998


No 208
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=9.2e-42  Score=368.07  Aligned_cols=255  Identities=28%  Similarity=0.419  Sum_probs=210.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      +...++|++.+.||+|+||.||+|++ +++.||||++.....  .....+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred             HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            34557899999999999999999987 478999998766533  345678899999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          751 ITEFLPRGSLFRILHRPH---CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~---~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      ||||+++++|.+++....   ..+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++...
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            999999999999996532   35899999999999999999999998  9999999999999999999999999998654


Q ss_pred             CCc--ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH---H----Hhhc--------
Q 002331          828 NTF--LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVV---G----AVGF--------  890 (935)
Q Consensus       828 ~~~--~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil---~----~I~~--------  890 (935)
                      ...  .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..+.+..   .    ....        
T Consensus       191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (321)
T 2qkw_B          191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD  270 (321)
T ss_dssp             SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred             cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence            321  1223346899999999999989999999999999999999999999865432211   0    0000        


Q ss_pred             cccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCc
Q 002331          891 QNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKR  933 (935)
Q Consensus       891 ~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHP  933 (935)
                      ......++..++..+.++|.+||+.|   |.+||++.+++++.
T Consensus       271 ~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~ell~~L  310 (321)
T 2qkw_B          271 PNLADKIRPESLRKFGDTAVKCLALS---SEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSCTTCSCHHHHHHHHHHHHHHTCSS---GGGSCCHHHHHHHH
T ss_pred             hhhccccCHHHHHHHHHHHHHHcCCC---cccCcCHHHHHHHH
Confidence            00111233445678999999999999   99999999999863


No 209
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=5.6e-41  Score=365.86  Aligned_cols=251  Identities=19%  Similarity=0.238  Sum_probs=194.4

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc----
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN----  747 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~----  747 (935)
                      ..++|++.+.||+|+||.||+|++  +++.||||++......   ...+.+|++.+..++||||++++++|.....    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            347899999999999999999987  4889999988654322   1234567788888999999999999865433    


Q ss_pred             ---eEEEEeeCCCCCHHHHHc---CCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCEEeeCCCCCCeeecC-CCcEEEE
Q 002331          748 ---LSIITEFLPRGSLFRILH---RPHCQVDEKRRIKMALDVARGMNCLH--TSTPTIVHRDLKSPNLLVDK-NWNVKVS  818 (935)
Q Consensus       748 ---l~LVmEy~~gGsL~dlL~---~~~~~lse~~il~Ia~QIa~AL~yLH--s~g~~IIHrDLKPeNILLd~-~g~VKL~  818 (935)
                         +++||||+++ +|.+.+.   .....+++..++.++.||+.||.|||  ++|  |+||||||+||||+. ++.+||+
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETTTTEEEEC
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCCCCcEEEe
Confidence               8899999987 5544332   34567899999999999999999999  777  999999999999996 8999999


Q ss_pred             eccccccccCCcccCCCCCCCCCccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----
Q 002331          819 DFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEP-SNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR----  893 (935)
Q Consensus       819 DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~-~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~----  893 (935)
                      |||+++...... ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+....+..+.....    
T Consensus       175 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          175 DFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             eCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            999998765432 234567899999999987654 89999999999999999999999999887766655421100    


Q ss_pred             --------------------------ccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          894 --------------------------RLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       894 --------------------------r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                                                ....+..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rpt~~e~l~hp~  317 (360)
T 3e3p_A          254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYL---PEERMKPYEALCHPY  317 (360)
T ss_dssp             HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSS---GGGSCCHHHHTTSGG
T ss_pred             HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccC---ccccCCHHHHhcCcc
Confidence                                      01122336789999999999999   999999999999998


No 210
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=6.2e-42  Score=366.70  Aligned_cols=259  Identities=32%  Similarity=0.526  Sum_probs=218.1

Q ss_pred             cccccCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          667 DVCECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       667 e~~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ....+++..++|++++.||+|+||.||+|++.+ .||||++............+.+|+.++++++||||+++++++.+.+
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            345678889999999999999999999998866 5999998765433333445778999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .+++||||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+ ++.+||+|||++...
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            999999999999999999876667999999999999999999999999  99999999999998 679999999998754


Q ss_pred             cCC-----cccCCCCCCCCCccCcccccC---------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 002331          827 HNT-----FLSSKSTAGTPEWMAPEVLRN---------EPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQN  892 (935)
Q Consensus       827 ~~~-----~~~~~s~~GT~~Y~APEvl~g---------~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~  892 (935)
                      ...     ........|++.|+|||++.+         ..++.++|||||||++|+|++|+.||...........+....
T Consensus       180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~  259 (319)
T 2y4i_B          180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM  259 (319)
T ss_dssp             --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTC
T ss_pred             ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCC
Confidence            321     112233468899999999874         457889999999999999999999999998888777765444


Q ss_pred             cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          893 RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       893 ~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .....+..++..+.+||.+||..|   |.+||++.+|++.
T Consensus       260 ~~~~~~~~~~~~l~~li~~~l~~~---p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          260 KPNLSQIGMGKEISDILLFCWAFE---QEERPTFTKLMDM  296 (319)
T ss_dssp             CCCCCCSSCCTTHHHHHHHHHCSS---TTTSCCHHHHHHH
T ss_pred             CCCCCcCCCCHHHHHHHHHHhcCC---hhhCcCHHHHHHH
Confidence            444444578899999999999999   9999999999864


No 211
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-40  Score=359.31  Aligned_cols=246  Identities=32%  Similarity=0.558  Sum_probs=200.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc--CCCceeeeecccccC----Cce
Q 002331          675 WEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL--RHPNVVLFMGAVTRP----PNL  748 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L--~HPNIVkl~g~~~~~----~~l  748 (935)
                      .++|++.+.||+|+||.||+|+++++.||||++....     ...+.+|.+++..+  +||||+++++++...    ..+
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            3689999999999999999999999999999986542     22344555555544  999999999998776    679


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCEEeeCCCCCCeeecCCCcEEEEec
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS--------TPTIVHRDLKSPNLLVDKNWNVKVSDF  820 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~--------g~~IIHrDLKPeNILLd~~g~VKL~DF  820 (935)
                      ++||||+++++|.++++..  .+++..++.++.||+.||.|||.+        +  |+||||||+||||+.++.+||+||
T Consensus       111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~kl~Df  186 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA--IAHRDLKSKNILVKKNGTCCIADL  186 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC--EECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--EEecccchHHEEECCCCCEEEEeC
Confidence            9999999999999999763  689999999999999999999998        7  999999999999999999999999


Q ss_pred             cccccccCCccc----CCCCCCCCCccCcccccCCCCCch------hHHHHHHHHHHHHHcC----------CCCCCCCC
Q 002331          821 GLSRLKHNTFLS----SKSTAGTPEWMAPEVLRNEPSNEK------CDVYSFGVILWELATL----------KLPWIGMN  880 (935)
Q Consensus       821 GlA~~~~~~~~~----~~s~~GT~~Y~APEvl~g~~~s~k------sDIWSLG~ILyELLTG----------~~PF~~~~  880 (935)
                      |+++........    .....||+.|+|||++.+..+...      +|||||||++|||++|          ..||....
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~  266 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV  266 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence            999765432211    234579999999999988766554      9999999999999999          77776532


Q ss_pred             -----hHHHHHHhhccccccCCCC-----cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 -----PMQVVGAVGFQNRRLEIPK-----ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 -----~~eil~~I~~~~~r~~ip~-----~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                           .......+.....+..++.     .+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~ell~~  325 (337)
T 3mdy_A          267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHN---PASRLTALRVKKT  325 (337)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSS---GGGSCCHHHHHHH
T ss_pred             CCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhC---hhhCCCHHHHHHH
Confidence                 2233333333344444443     56788999999999999   9999999999976


No 212
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.7e-40  Score=358.97  Aligned_cols=249  Identities=20%  Similarity=0.263  Sum_probs=206.1

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CC-ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc------eeeeeccccc
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NG-TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN------VVLFMGAVTR  744 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g-~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN------IVkl~g~~~~  744 (935)
                      ..++|++.+.||+|+||.||+|.+  .+ +.||||++...   ......+.+|+.+++.++|++      |+.+++++..
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            357899999999999999999987  33 68999998643   344567888999999987655      8999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee--------------
Q 002331          745 PPNLSIITEFLPRGSLFRILHR-PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV--------------  809 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~-~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL--------------  809 (935)
                      .+.++|||||+ +++|.+++.. ....+++..++.|+.||+.||.|||++|  |+||||||+||||              
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeccccccccccccc
Confidence            99999999999 5566666543 3357999999999999999999999998  9999999999999              


Q ss_pred             -----cCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 002331          810 -----DKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQV  884 (935)
Q Consensus       810 -----d~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~ei  884 (935)
                           +.++.+||+|||+++.....   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 56889999999999865433   2346799999999999999999999999999999999999999998877655


Q ss_pred             HHHhhcccccc------------------------------------------CCCCcCcHHHHHHHHHHHhhCCCCcCC
Q 002331          885 VGAVGFQNRRL------------------------------------------EIPKELDPLVARIIWECWQTGWSSLHI  922 (935)
Q Consensus       885 l~~I~~~~~r~------------------------------------------~ip~~ls~~L~dLI~qCL~~D~ssP~k  922 (935)
                      ...+.......                                          ......+..+.+||.+||+.|   |.+
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d---P~~  324 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD---PAQ  324 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS---TTT
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC---hhh
Confidence            44332111000                                          011223568999999999999   999


Q ss_pred             CcCHHHHHhCcC
Q 002331          923 RTSQAQLSHKRF  934 (935)
Q Consensus       923 RPSa~EILqHPF  934 (935)
                      ||++.++|+|||
T Consensus       325 Rpt~~e~l~hp~  336 (355)
T 2eu9_A          325 RITLAEALLHPF  336 (355)
T ss_dssp             SCCHHHHTTSGG
T ss_pred             CcCHHHHhcChh
Confidence            999999999998


No 213
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=3.9e-42  Score=370.60  Aligned_cols=260  Identities=26%  Similarity=0.405  Sum_probs=210.0

Q ss_pred             ccccCCCCCCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          668 VCECEIPWEDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       668 ~~~~ei~~edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      ..++++..++|++.+.||+|+||.||+|++ +++.||||++...... .....+.+|+.+++.++||||+++++++....
T Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             THHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred             HHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEecCC
Confidence            345567778999999999999999999976 5889999998754321 12225789999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCC---CCCCHHHHHHHHHHHHHHHHHHHhc---CCCEEeeCCCCCCeeecCCCcEEEEec
Q 002331          747 NLSIITEFLPRGSLFRILHRPH---CQVDEKRRIKMALDVARGMNCLHTS---TPTIVHRDLKSPNLLVDKNWNVKVSDF  820 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~---~~lse~~il~Ia~QIa~AL~yLHs~---g~~IIHrDLKPeNILLd~~g~VKL~DF  820 (935)
                      ..++||||+++++|.+++....   ..+++..++.|+.||+.||.|||++   +  |+||||||+||||+.++.+||+||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~Df  178 (326)
T 3uim_A          101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDF  178 (326)
T ss_dssp             CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC--EECCCCSGGGEEECTTCCEEECCC
T ss_pred             ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeCCCchhhEEECCCCCEEeccC
Confidence            9999999999999999997632   3489999999999999999999998   8  999999999999999999999999


Q ss_pred             cccccccCCc-ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----Ch---HHHHHHhhc-
Q 002331          821 GLSRLKHNTF-LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGM-----NP---MQVVGAVGF-  890 (935)
Q Consensus       821 GlA~~~~~~~-~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~-----~~---~eil~~I~~-  890 (935)
                      |+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...     ..   ......... 
T Consensus       179 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  258 (326)
T 3uim_A          179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE  258 (326)
T ss_dssp             SSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS
T ss_pred             ccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc
Confidence            9998764322 2233456999999999999888999999999999999999999999521     11   111111100 


Q ss_pred             --------cccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCc
Q 002331          891 --------QNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKR  933 (935)
Q Consensus       891 --------~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHP  933 (935)
                              ......++...+..+.+||.+||+.|   |.+||++.+|++|-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~ell~~L  306 (326)
T 3uim_A          259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS---PMERPKMSEVVRML  306 (326)
T ss_dssp             CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSC---GGGSCCHHHHHHHH
T ss_pred             hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcC---CccCCCHHHHHHHh
Confidence                    00111223344578999999999999   99999999999874


No 214
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2.3e-41  Score=372.67  Aligned_cols=253  Identities=18%  Similarity=0.190  Sum_probs=201.5

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEEC-------CceEEEEEeeccCCCHHH---------HHHHHHHHHHHHHcCCCce
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADWN-------GTEVAVKKFLDQDFSGAA---------LLEFKREVKIMRRLRHPNV  735 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~~-------g~~VAVK~i~~~~~~~~~---------~~~f~~Ei~iL~~L~HPNI  735 (935)
                      ++..++|++++.||+|+||.||+|.+.       ++.||||++.........         ...+..|+..+..++||||
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            355679999999999999999999873       468999998765311100         0123345666777889999


Q ss_pred             eeeecccccC----CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-
Q 002331          736 VLFMGAVTRP----PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-  810 (935)
Q Consensus       736 Vkl~g~~~~~----~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-  810 (935)
                      +++++++...    ..++|||||+ +++|.+++......+++..++.|+.||+.||.|||+++  |+||||||+||||+ 
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~  187 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNY  187 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEES
T ss_pred             CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEec
Confidence            9999998765    4489999999 99999999876678999999999999999999999998  99999999999999 


Q ss_pred             -CCCcEEEEeccccccccCCcc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 002331          811 -KNWNVKVSDFGLSRLKHNTFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM  882 (935)
Q Consensus       811 -~~g~VKL~DFGlA~~~~~~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~  882 (935)
                       .++.+||+|||+++.......       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~  267 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD  267 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence             889999999999986543211       113345999999999999999999999999999999999999999864322


Q ss_pred             -HHHHHhhcccccc---------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          883 -QVVGAVGFQNRRL---------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       883 -eil~~I~~~~~r~---------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                       ....... .....         ..+..+++++.+||.+||..+   |.+||++.+|++
T Consensus       268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~---p~~RP~~~~l~~  322 (364)
T 3op5_A          268 PKYVRDSK-IRYRENIASLMDKCFPAANAPGEIAKYMETVKLLD---YTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHH-HHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCC---TTCCCCHHHHHH
T ss_pred             HHHHHHHH-HHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCC---CCCCCCHHHHHH
Confidence             2111110 00001         112567899999999999999   999999999875


No 215
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=5.5e-41  Score=362.51  Aligned_cols=249  Identities=29%  Similarity=0.436  Sum_probs=195.8

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHH--HHHcCCCceeeeeccc-----c
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKI--MRRLRHPNVVLFMGAV-----T  743 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~i--L~~L~HPNIVkl~g~~-----~  743 (935)
                      ..+..++|++++.||+|+||.||+|+++++.||||++....     ...+..|..+  +..++||||+++++.+     .
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence            45677999999999999999999999999999999986543     2233334444  4458999999999743     3


Q ss_pred             cCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCEEeeCCCCCCeeecCCCc
Q 002331          744 RPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS---------TPTIVHRDLKSPNLLVDKNWN  814 (935)
Q Consensus       744 ~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~---------g~~IIHrDLKPeNILLd~~g~  814 (935)
                      ....+++||||+++|+|.+++...  ..++..++.|+.||+.||.|||+.         +  |+||||||+||||+.++.
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~--ivH~Dikp~Nill~~~~~  158 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLNSRNVLVKNDGT  158 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC--EECSSCSGGGEEECTTSC
T ss_pred             CCceEEEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccc--eeecccccceEEEcCCCc
Confidence            334578999999999999999763  458899999999999999999998         8  999999999999999999


Q ss_pred             EEEEeccccccccCCc--------ccCCCCCCCCCccCcccccC-------CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002331          815 VKVSDFGLSRLKHNTF--------LSSKSTAGTPEWMAPEVLRN-------EPSNEKCDVYSFGVILWELATLKLPWIGM  879 (935)
Q Consensus       815 VKL~DFGlA~~~~~~~--------~~~~s~~GT~~Y~APEvl~g-------~~~s~ksDIWSLG~ILyELLTG~~PF~~~  879 (935)
                      +||+|||+++......        .......||+.|+|||++.+       ..++.++|||||||++|||++|..||...
T Consensus       159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  238 (336)
T 3g2f_A          159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG  238 (336)
T ss_dssp             EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred             EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence            9999999998654321        11234579999999999987       34567899999999999999997776432


Q ss_pred             Ch------------------HHHHHHhhccccccCCCCc------CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          880 NP------------------MQVVGAVGFQNRRLEIPKE------LDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       880 ~~------------------~eil~~I~~~~~r~~ip~~------ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ..                  ......+.....+..++..      +++.+.+||.+||+.|   |.+||++.+|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~e~l~  311 (336)
T 3g2f_A          239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD---AEARLTAQXAEE  311 (336)
T ss_dssp             SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSS---GGGSCCHHHHHH
T ss_pred             cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCC---hhhCcchHHHHH
Confidence            11                  1222222223344445543      4568999999999999   999999999964


No 216
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=8.4e-41  Score=389.48  Aligned_cols=254  Identities=32%  Similarity=0.540  Sum_probs=222.5

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEEECC-ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHADWNG-TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN  747 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~~~g-~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~  747 (935)
                      ..+++..++|++.++||+|+||.||+|++.+ ..||||++......   .+.|.+|+.+|++++|||||++++++.+ +.
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee-cc
Confidence            4577888999999999999999999999864 67999999765433   3568899999999999999999999876 67


Q ss_pred             eEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      +||||||+++|+|.+++... ...+++..++.|+.||+.||.|||+++  ||||||||+||||+.++.+||+|||+++..
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            89999999999999999642 345899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          827 HNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       827 ~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..... ......++..|+|||++.+..++.++|||||||+||||++ |+.||.+....++...+. ...+...+..++..
T Consensus       414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~  492 (535)
T 2h8h_A          414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPES  492 (535)
T ss_dssp             CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred             CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            54321 1233456788999999999999999999999999999999 899999999888877764 44566778899999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+||.+||+.|   |.+||++++|++.
T Consensus       493 l~~li~~cl~~d---P~~RPt~~~l~~~  517 (535)
T 2h8h_A          493 LHDLMCQCWRKE---PEERPTFEYLQAF  517 (535)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCC---hhHCcCHHHHHHH
Confidence            999999999999   9999999998763


No 217
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2e-40  Score=358.27  Aligned_cols=248  Identities=27%  Similarity=0.406  Sum_probs=209.7

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC--Cc
Q 002331          676 EDLVLGERIGLGSYGEVYHADW------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP--PN  747 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~--~~  747 (935)
                      +.|++++.||+|+||+||++.+      +++.||||++... ........+.+|+.+|++++||||+++++++.+.  ..
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            4469999999999999999865      5788999998765 3445667789999999999999999999999774  56


Q ss_pred             eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccccc
Q 002331          748 LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKH  827 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~  827 (935)
                      +++||||+++++|.+++.+.  .+++..++.|+.||+.||.|||+.|  |+||||||+||||+.++.+||+|||++....
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            89999999999999999764  4899999999999999999999999  9999999999999999999999999998765


Q ss_pred             CCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--------------HHHHhhc
Q 002331          828 NTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ--------------VVGAVGF  890 (935)
Q Consensus       828 ~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e--------------il~~I~~  890 (935)
                      ...   .......+++.|+|||++.+..++.++|||||||++|+|++|..||.......              .......
T Consensus       186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence            432   12234567888999999999889999999999999999999999997643211              1112222


Q ss_pred             cccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          891 QNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       891 ~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .......+..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       266 ~~~~~~~~~~~~~~l~~li~~~l~~d---P~~Rps~~ell~  303 (318)
T 3lxp_A          266 RGERLPRPDKCPAEVYHLMKNCWETE---ASFRPTFENLIP  303 (318)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSS---GGGSCCHHHHHH
T ss_pred             cccCCCCCccccHHHHHHHHHHcCCC---cccCcCHHHHHH
Confidence            44556677889999999999999999   999999999986


No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1e-40  Score=358.01  Aligned_cols=254  Identities=26%  Similarity=0.393  Sum_probs=192.6

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeeccc----
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAV----  742 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~----  742 (935)
                      .+++...+|++.+.||+|+||.||+|++  +++.||||++....  ......+.+|+.+++++. ||||+++++++    
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK   99 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence            3455667899999999999999999988  78899999886543  445667889999999995 99999999988    


Q ss_pred             ----ccCCceEEEEeeCCCCCHHHHHcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEE
Q 002331          743 ----TRPPNLSIITEFLPRGSLFRILHR--PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVK  816 (935)
Q Consensus       743 ----~~~~~l~LVmEy~~gGsL~dlL~~--~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VK  816 (935)
                          .....+++||||+. |+|.+++.+  ....+++..++.|+.||+.||.|||+++++|+||||||+||||+.++.+|
T Consensus       100 ~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k  178 (337)
T 3ll6_A          100 EESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK  178 (337)
T ss_dssp             TTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred             cccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence                34445899999996 689888854  34579999999999999999999999877799999999999999999999


Q ss_pred             EEeccccccccCCcc------------cCCCCCCCCCccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 002331          817 VSDFGLSRLKHNTFL------------SSKSTAGTPEWMAPEVL---RNEPSNEKCDVYSFGVILWELATLKLPWIGMNP  881 (935)
Q Consensus       817 L~DFGlA~~~~~~~~------------~~~s~~GT~~Y~APEvl---~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~  881 (935)
                      |+|||+++.......            ......||+.|+|||++   .+..++.++|||||||++|+|++|+.||.....
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  258 (337)
T 3ll6_A          179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK  258 (337)
T ss_dssp             BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence            999999987643211            11134689999999998   566789999999999999999999999987665


Q ss_pred             HHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCc
Q 002331          882 MQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKR  933 (935)
Q Consensus       882 ~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHP  933 (935)
                      ..+...    ......+..++..+.+||.+||+.|   |.+||++.+++++.
T Consensus       259 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~---p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          259 LRIVNG----KYSIPPHDTQYTVFHSLIRAMLQVN---PEERLSIAEVVHQL  303 (337)
T ss_dssp             -----------CCCCTTCCSSGGGHHHHHHHSCSS---GGGSCCHHHHHHHH
T ss_pred             HHhhcC----cccCCcccccchHHHHHHHHHccCC---hhhCcCHHHHHHHH
Confidence            544332    2233445667788999999999999   99999999999874


No 219
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.2e-41  Score=373.66  Aligned_cols=250  Identities=30%  Similarity=0.496  Sum_probs=204.6

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--C-C--ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc-cCCceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--N-G--TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT-RPPNLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~-g--~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~-~~~~l~  749 (935)
                      ..|.+.+.||+|+||.||+|++  . +  ..||||.+.... .......+.+|+.++++++||||+++++++. .++..+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence            4588899999999999999976  2 2  358999876532 3355678999999999999999999999864 456789


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCC
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~  829 (935)
                      +||||+++++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||+++.....
T Consensus       168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccccc
Confidence            999999999999999887777899999999999999999999999  999999999999999999999999999865432


Q ss_pred             cc----cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCcHH
Q 002331          830 FL----SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPL  904 (935)
Q Consensus       830 ~~----~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~  904 (935)
                      ..    ......+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..+....+. ...+...|..+++.
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~  324 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDP  324 (373)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTTCCHH
T ss_pred             ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            21    1233457788999999999999999999999999999999 688888877666655543 34456677889999


Q ss_pred             HHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          905 VARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       905 L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+||.+||+.|   |.+||++.+|+++
T Consensus       325 l~~li~~cl~~d---p~~RPs~~ell~~  349 (373)
T 3c1x_A          325 LYEVMLKCWHPK---AEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCC---hhhCcCHHHHHHH
Confidence            999999999999   9999999999874


No 220
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=3.4e-40  Score=366.13  Aligned_cols=252  Identities=23%  Similarity=0.245  Sum_probs=207.8

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CC-----ceeeeeccccc
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HP-----NVVLFMGAVTR  744 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HP-----NIVkl~g~~~~  744 (935)
                      ...++|++.+.||+|+||+||+|.+  +++.||||++...   ......+.+|+.+++.++ |+     +|+++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  127 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF  127 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence            3458999999999999999999987  5788999998643   344566788999988884 55     49999999999


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec--CCCcEEEEecc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD--KNWNVKVSDFG  821 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd--~~g~VKL~DFG  821 (935)
                      .+.++|||||+++ +|.+++.... ..+++..++.++.||+.||.|||.+..+||||||||+||||+  .++.+||+|||
T Consensus       128 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          128 RNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             TTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             CCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            9999999999964 9999886543 468999999999999999999995333499999999999995  57889999999


Q ss_pred             ccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC-----
Q 002331          822 LSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE-----  896 (935)
Q Consensus       822 lA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~-----  896 (935)
                      +++.....   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......+.     
T Consensus       207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  283 (382)
T 2vx3_A          207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD  283 (382)
T ss_dssp             TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred             Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            99876543   2346799999999999999999999999999999999999999999887766655432111000     


Q ss_pred             -----------CCC----------------------------------------------cCcHHHHHHHHHHHhhCCCC
Q 002331          897 -----------IPK----------------------------------------------ELDPLVARIIWECWQTGWSS  919 (935)
Q Consensus       897 -----------ip~----------------------------------------------~ls~~L~dLI~qCL~~D~ss  919 (935)
                                 ++.                                              ...+.+.+||.+||+.|   
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d---  360 (382)
T 2vx3_A          284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD---  360 (382)
T ss_dssp             TCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC---
T ss_pred             hhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC---
Confidence                       000                                              01147899999999999   


Q ss_pred             cCCCcCHHHHHhCcC
Q 002331          920 LHIRTSQAQLSHKRF  934 (935)
Q Consensus       920 P~kRPSa~EILqHPF  934 (935)
                      |.+|||+.|+|+|||
T Consensus       361 P~~Rpta~e~L~hp~  375 (382)
T 2vx3_A          361 PKTRIQPYYALQHSF  375 (382)
T ss_dssp             TTTSCCHHHHTTSGG
T ss_pred             hhhCCCHHHHhcCcc
Confidence            999999999999998


No 221
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.9e-40  Score=393.01  Aligned_cols=253  Identities=25%  Similarity=0.444  Sum_probs=215.9

Q ss_pred             cCCCCCCeeEEE-EeeecCcEEEEEEEE----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          671 CEIPWEDLVLGE-RIGLGSYGEVYHADW----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       671 ~ei~~edy~I~e-~LG~G~fG~Vyka~~----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      +.+..+++.+.+ .||+|+||.||+|.+    .+..||||+++... .......+.+|+++|++++|||||++++++.. 
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-  407 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-  407 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-
Confidence            445667777776 899999999999976    34579999987653 22345678999999999999999999999976 


Q ss_pred             CceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          746 PNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       746 ~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      +.++|||||+++|+|.+++......+++..++.|+.||+.||.|||+++  ||||||||+||||+.++.+||+|||+++.
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~  485 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKA  485 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred             CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence            5699999999999999999876677999999999999999999999999  99999999999999999999999999987


Q ss_pred             ccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcC
Q 002331          826 KHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKEL  901 (935)
Q Consensus       826 ~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~l  901 (935)
                      ......   ......+++.|+|||++.+..++.++|||||||+||||++ |+.||.+.+..++...+. ...+..+|..+
T Consensus       486 ~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~  564 (613)
T 2ozo_A          486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPEC  564 (613)
T ss_dssp             CC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCCCCCTTC
T ss_pred             ccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcC
Confidence            643211   1122345689999999999999999999999999999998 999999998888877765 45567788899


Q ss_pred             cHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          902 DPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       902 s~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ++.+.+||.+||+.|   |.+||++.+|++
T Consensus       565 ~~~l~~li~~cl~~d---P~~RPs~~~l~~  591 (613)
T 2ozo_A          565 PPELYALMSDCWIYK---WEDRPDFLTVEQ  591 (613)
T ss_dssp             CHHHHHHHHHTTCSS---TTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCC---hhHCcCHHHHHH
Confidence            999999999999999   999999999865


No 222
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.9e-40  Score=356.92  Aligned_cols=252  Identities=20%  Similarity=0.258  Sum_probs=205.4

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|++.+.||+|+||.||+|++  +++.||||++..... .......+.+|+.++++++||||+++++++...+.+++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            357899999999999999999986  588999999876533 34456778999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++.......
T Consensus       112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            99999999999999753 46899999999999999999999999  9999999999999999999999999998664432


Q ss_pred             -ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCcCcHHHHHH
Q 002331          831 -LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNR-RLEIPKELDPLVARI  908 (935)
Q Consensus       831 -~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~-r~~ip~~ls~~L~dL  908 (935)
                       .......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...+...+..... ...++..+++.+.+|
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  268 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV  268 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence             122345789999999999999999999999999999999999999998876655444432221 224567789999999


Q ss_pred             HHHHHhhCCCCcCCCc-CHHHHHh
Q 002331          909 IWECWQTGWSSLHIRT-SQAQLSH  931 (935)
Q Consensus       909 I~qCL~~D~ssP~kRP-Sa~EILq  931 (935)
                      |.+||+.|   |.+|| +++++++
T Consensus       269 i~~~l~~d---P~~Rp~s~~~l~~  289 (309)
T 2h34_A          269 IARGMAKN---PEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHTCSS---GGGSCSSHHHHHH
T ss_pred             HHHhccCC---HHHHHHhHHHHHH
Confidence            99999999   99999 8888875


No 223
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.6e-41  Score=367.70  Aligned_cols=252  Identities=21%  Similarity=0.236  Sum_probs=199.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE-----CCceEEEEEeeccCCCHH---------HHHHHHHHHHHHHHcCCCceee
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW-----NGTEVAVKKFLDQDFSGA---------ALLEFKREVKIMRRLRHPNVVL  737 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~-----~g~~VAVK~i~~~~~~~~---------~~~~f~~Ei~iL~~L~HPNIVk  737 (935)
                      ++..++|++++.||+|+||.||+|.+     .+..||||++........         ....+.+|+.+++.++||||++
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            34568899999999999999999987     457899999876532111         1123567888999999999999


Q ss_pred             eeccccc----CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC
Q 002331          738 FMGAVTR----PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW  813 (935)
Q Consensus       738 l~g~~~~----~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g  813 (935)
                      +++++..    ...+|+||||+ +++|.+++.... .+++..++.|+.||+.||.|||+++  |+||||||+||||+.++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSS
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCC
Confidence            9999877    67899999999 999999997644 7999999999999999999999998  99999999999998877


Q ss_pred             --cEEEEeccccccccCCcc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--ChH
Q 002331          814 --NVKVSDFGLSRLKHNTFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGM--NPM  882 (935)
Q Consensus       814 --~VKL~DFGlA~~~~~~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~--~~~  882 (935)
                        .+||+|||+++.......       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.  +..
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence              999999999986543211       113457999999999999999999999999999999999999999652  322


Q ss_pred             HHHHHhhccccccCCC---------CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          883 QVVGAVGFQNRRLEIP---------KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       883 eil~~I~~~~~r~~ip---------~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ......  ......++         ..+++.+.+||.+||..|   |.+||++++|++.
T Consensus       269 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~~  322 (345)
T 2v62_A          269 AVQTAK--TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLA---YDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHH--HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCC---TTCCCCHHHHHHH
T ss_pred             HHHHHH--HhhcccccHHHHhhccccccHHHHHHHHHHHhhcC---cccCCCHHHHHHH
Confidence            222111  11112222         278899999999999999   9999999999864


No 224
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=5e-40  Score=347.72  Aligned_cols=247  Identities=21%  Similarity=0.258  Sum_probs=204.2

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc-ccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV-TRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~-~~~~~l~LV  751 (935)
                      .++|++.+.||+|+||.||+|++  +++.||||++......    ..+.+|+.+++.++|++++..+.++ ......++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence            36899999999999999999985  6889999998765433    2477899999999987766655554 566778999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccC
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~  828 (935)
                      |||+ +++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||   +.++.+||+|||++.....
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            9999 88999999855567999999999999999999999999  9999999999999   4889999999999987654


Q ss_pred             Ccc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhc---ccccc
Q 002331          829 TFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP---MQVVGAVGF---QNRRL  895 (935)
Q Consensus       829 ~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~---~eil~~I~~---~~~r~  895 (935)
                      ...       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...   .+....+..   .....
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (296)
T 3uzp_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE  240 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred             cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH
Confidence            322       12456799999999999999999999999999999999999999987432   122222211   11112


Q ss_pred             CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          896 EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       896 ~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .++..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       241 ~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~  273 (296)
T 3uzp_A          241 VLCKGYPSEFATYLNFCRSLR---FDDKPDYSYLRQ  273 (296)
T ss_dssp             HHTTTSCHHHHHHHHHHHTSC---TTCCCCHHHHHH
T ss_pred             HHHhhCCHHHHHHHHHHHhcC---cCcCCCHHHHHH
Confidence            234678999999999999999   999999999876


No 225
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=372.40  Aligned_cols=248  Identities=21%  Similarity=0.311  Sum_probs=186.0

Q ss_pred             CeeE-EEEeeecCcEEEEEEEEC----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc--ccCCceE
Q 002331          677 DLVL-GERIGLGSYGEVYHADWN----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV--TRPPNLS  749 (935)
Q Consensus       677 dy~I-~e~LG~G~fG~Vyka~~~----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~--~~~~~l~  749 (935)
                      .|.+ +++||+|+||.||+|++.    ++.||||++.......    .+.+|+.+|+.++|||||+++++|  .....+|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM----SACREIALLRELKHPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCH----HHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH----HHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence            4555 567999999999999863    6789999987665433    567899999999999999999999  4567899


Q ss_pred             EEEeeCCCCCHHHHHcC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee----cCCCcEEE
Q 002331          750 IITEFLPRGSLFRILHR--------PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV----DKNWNVKV  817 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~--------~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL----d~~g~VKL  817 (935)
                      |||||+.+ +|.+++..        ....+++..++.|+.||+.||.|||+++  |+||||||+||||    +.++.+||
T Consensus        97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            99999965 88877742        1235899999999999999999999999  9999999999999    67899999


Q ss_pred             EeccccccccCCc---ccCCCCCCCCCccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH---------HH
Q 002331          818 SDFGLSRLKHNTF---LSSKSTAGTPEWMAPEVLRNE-PSNEKCDVYSFGVILWELATLKLPWIGMNPM---------QV  884 (935)
Q Consensus       818 ~DFGlA~~~~~~~---~~~~s~~GT~~Y~APEvl~g~-~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~---------ei  884 (935)
                      +|||+++......   ......+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+....         +.
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            9999998765321   223446799999999999874 4899999999999999999999999865431         22


Q ss_pred             HHHhhcccccc------------------------------------CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHH
Q 002331          885 VGAVGFQNRRL------------------------------------EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQ  928 (935)
Q Consensus       885 l~~I~~~~~r~------------------------------------~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~E  928 (935)
                      +..+......+                                    ......++.+.+||.+||+.|   |.+|||++|
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~d---P~~R~ta~e  330 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD---PIKRITSEQ  330 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSS---GGGSCCHHH
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCC---cccCCCHHH
Confidence            22211000000                                    001122678899999999999   999999999


Q ss_pred             HHhCcC
Q 002331          929 LSHKRF  934 (935)
Q Consensus       929 ILqHPF  934 (935)
                      +|+|||
T Consensus       331 ~L~hp~  336 (405)
T 3rgf_A          331 AMQDPY  336 (405)
T ss_dssp             HHTSGG
T ss_pred             HhcChh
Confidence            999999


No 226
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.4e-40  Score=363.90  Aligned_cols=250  Identities=18%  Similarity=0.279  Sum_probs=203.9

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-----------CCceeeee
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-----------HPNVVLFM  739 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-----------HPNIVkl~  739 (935)
                      +..++|++.+.||+|+||.||+|++  +++.||||++...   ......+.+|+.++++++           ||||++++
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~   92 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL   92 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence            3457899999999999999999986  6889999998643   334566788999998885           89999999


Q ss_pred             cccccCC----ceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhc-CCCEEeeCCCCCCeeec---
Q 002331          740 GAVTRPP----NLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTS-TPTIVHRDLKSPNLLVD---  810 (935)
Q Consensus       740 g~~~~~~----~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~-g~~IIHrDLKPeNILLd---  810 (935)
                      +++...+    .+++||||+ +++|.+++.+. ...+++..++.|+.||+.||.|||++ |  |+||||||+||||+   
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~  169 (373)
T 1q8y_A           93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVD  169 (373)
T ss_dssp             EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEE
T ss_pred             HHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccC
Confidence            9987654    689999999 88999998653 34589999999999999999999998 8  99999999999994   


Q ss_pred             ---CCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------
Q 002331          811 ---KNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP------  881 (935)
Q Consensus       811 ---~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~------  881 (935)
                         ..+.+||+|||+++.....   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.      
T Consensus       170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence               4458999999999876543   2345789999999999999999999999999999999999999986542      


Q ss_pred             HHHHHHhhc----------------------------------------cccccCCCCcCcHHHHHHHHHHHhhCCCCcC
Q 002331          882 MQVVGAVGF----------------------------------------QNRRLEIPKELDPLVARIIWECWQTGWSSLH  921 (935)
Q Consensus       882 ~eil~~I~~----------------------------------------~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~  921 (935)
                      ...+..+..                                        ......++..++..+.+||.+||+.|   |.
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~  323 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD---PR  323 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSS---TT
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccC---cc
Confidence            111111100                                        00112344566788999999999999   99


Q ss_pred             CCcCHHHHHhCcC
Q 002331          922 IRTSQAQLSHKRF  934 (935)
Q Consensus       922 kRPSa~EILqHPF  934 (935)
                      +||++.+||+|||
T Consensus       324 ~Rpt~~ell~hp~  336 (373)
T 1q8y_A          324 KRADAGGLVNHPW  336 (373)
T ss_dssp             TCBCHHHHHTCGG
T ss_pred             ccCCHHHHhhChh
Confidence            9999999999998


No 227
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.7e-41  Score=357.57  Aligned_cols=247  Identities=22%  Similarity=0.377  Sum_probs=202.8

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHc----CCCceeeeecc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRL----RHPNVVLFMGA  741 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L----~HPNIVkl~g~  741 (935)
                      +...++|++++.||+|+||.||+|++  +++.||||++.......    .....+.+|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34457899999999999999999977  67899999987654322    1233456799999998    89999999999


Q ss_pred             cccCCceEEEEee-CCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEEEe
Q 002331          742 VTRPPNLSIITEF-LPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSD  819 (935)
Q Consensus       742 ~~~~~~l~LVmEy-~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~D  819 (935)
                      +...+..++|||| +.+++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||||+ .++.+||+|
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECC
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEE
Confidence            9999999999999 7899999999763 46899999999999999999999999  99999999999999 899999999


Q ss_pred             ccccccccCCcccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC
Q 002331          820 FGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIP  898 (935)
Q Consensus       820 FGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip  898 (935)
                      ||++.......  .....|++.|+|||++.+..+ +.++|||||||++|+|++|+.||.....  ..      .....++
T Consensus       184 fg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~------~~~~~~~  253 (312)
T 2iwi_A          184 FGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--IL------EAELHFP  253 (312)
T ss_dssp             CSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HH------HTCCCCC
T ss_pred             cchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hh------hhccCCc
Confidence            99998765432  234678999999999987666 4589999999999999999999976421  11      2344567


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..++..+.+||.+||+.|   |.+||++.++++|||
T Consensus       254 ~~~~~~~~~li~~~l~~~---p~~Rps~~e~l~~~~  286 (312)
T 2iwi_A          254 AHVSPDCCALIRRCLAPK---PSSRPSLEEILLDPW  286 (312)
T ss_dssp             TTSCHHHHHHHHHHTCSS---TTTSCCHHHHHHSTT
T ss_pred             ccCCHHHHHHHHHHccCC---hhhCcCHHHHhcChh
Confidence            889999999999999999   999999999999999


No 228
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.7e-40  Score=348.70  Aligned_cols=241  Identities=23%  Similarity=0.362  Sum_probs=206.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc---------
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR---------  744 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~---------  744 (935)
                      .+|++.+.||+|+||.||+|++  +++.||||++....      ..+.+|+.++++++||||+++++++..         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            5799999999999999999988  48899999987653      246789999999999999999998754         


Q ss_pred             -------CCceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEE
Q 002331          745 -------PPNLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVK  816 (935)
Q Consensus       745 -------~~~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VK  816 (935)
                             ...+++||||+++++|.+++... ...+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCEE
Confidence                   44589999999999999999643 356899999999999999999999999  99999999999999999999


Q ss_pred             EEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC
Q 002331          817 VSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLE  896 (935)
Q Consensus       817 L~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~  896 (935)
                      |+|||++....... ......|++.|+|||++.+..++.++|||||||++|+|++|..||....  .....+.    ...
T Consensus       163 l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~----~~~  235 (284)
T 2a19_B          163 IGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--KFFTDLR----DGI  235 (284)
T ss_dssp             ECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--HHHHHHH----TTC
T ss_pred             ECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--HHHHHhh----ccc
Confidence            99999998765432 2344579999999999999999999999999999999999998875321  2222221    233


Q ss_pred             CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          897 IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       897 ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ++..++..+.+||.+||+.|   |.+||++.+++++.+
T Consensus       236 ~~~~~~~~~~~li~~~l~~d---p~~Rps~~e~l~~l~  270 (284)
T 2a19_B          236 ISDIFDKKEKTLLQKLLSKK---PEDRPNTSEILRTLT  270 (284)
T ss_dssp             CCTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCC---hhhCcCHHHHHHHHH
Confidence            56778999999999999999   999999999999865


No 229
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.6e-40  Score=356.39  Aligned_cols=245  Identities=35%  Similarity=0.602  Sum_probs=205.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHH--cCCCceeeeecccccCC----ceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRR--LRHPNVVLFMGAVTRPP----NLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~--L~HPNIVkl~g~~~~~~----~l~  749 (935)
                      ++|++.+.||+|+||.||+|+++++.||||++....     ...+.+|++++..  ++||||+++++++....    .++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence            679999999999999999999999999999986442     3456788899888  69999999999998776    799


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCEEeeCCCCCCeeecCCCcEEEEecc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLH--------TSTPTIVHRDLKSPNLLVDKNWNVKVSDFG  821 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLH--------s~g~~IIHrDLKPeNILLd~~g~VKL~DFG  821 (935)
                      +||||+++++|.+++.+  ..+++..++.++.||+.||.|||        +.+  |+||||||+||||+.++.+||+|||
T Consensus       117 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg  192 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADLG  192 (342)
T ss_dssp             EEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEEEEECC
Confidence            99999999999999976  35899999999999999999999        777  9999999999999999999999999


Q ss_pred             ccccccCCcc----cCCCCCCCCCccCcccccCCC------CCchhHHHHHHHHHHHHHcC----------CCCCCCCC-
Q 002331          822 LSRLKHNTFL----SSKSTAGTPEWMAPEVLRNEP------SNEKCDVYSFGVILWELATL----------KLPWIGMN-  880 (935)
Q Consensus       822 lA~~~~~~~~----~~~s~~GT~~Y~APEvl~g~~------~s~ksDIWSLG~ILyELLTG----------~~PF~~~~-  880 (935)
                      ++........    ......||+.|+|||++.+..      ++.++|||||||++|+|++|          ..||.... 
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~  272 (342)
T 1b6c_B          193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  272 (342)
T ss_dssp             TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence            9987654321    234557999999999998763      23689999999999999999          78987652 


Q ss_pred             ----hHHHHHHhhccccccCCCC-----cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          881 ----PMQVVGAVGFQNRRLEIPK-----ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       881 ----~~eil~~I~~~~~r~~ip~-----~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                          ...+...+.....++.++.     .++..+.+||.+||+.|   |.+||++.+|++|
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---p~~Rps~~~i~~~  330 (342)
T 1b6c_B          273 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN---GAARLTALRIKKT  330 (342)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSS---GGGSCCHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccC---hhhCCCHHHHHHH
Confidence                2344444433444455553     34578999999999999   9999999999976


No 230
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=5.2e-40  Score=346.92  Aligned_cols=246  Identities=21%  Similarity=0.266  Sum_probs=200.5

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc-ccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV-TRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~-~~~~~l~LVm  752 (935)
                      ++|++.+.||+|+||.||+|++  .++.||||++......    ..+.+|+.+++.++|++++..+..+ ...+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            6899999999999999999985  6889999987654322    2477899999999887766666554 6667789999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccCC
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHNT  829 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~~  829 (935)
                      ||+ +++|.+++......+++..++.++.||+.||.|||+++  |+||||||+||||   +.++.+||+|||+++.....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence            999 88999999865567999999999999999999999999  9999999999999   78999999999999876543


Q ss_pred             cc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc---cccccC
Q 002331          830 FL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM---QVVGAVGF---QNRRLE  896 (935)
Q Consensus       830 ~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~---eil~~I~~---~~~r~~  896 (935)
                      ..       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....   .....+..   ......
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (296)
T 4hgt_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV  241 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred             ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhh
Confidence            21       223567999999999999999999999999999999999999999875332   12222111   111112


Q ss_pred             CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          897 IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       897 ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +...+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       242 ~~~~~~~~l~~li~~~l~~~---p~~Rpt~~~l~~  273 (296)
T 4hgt_A          242 LCKGYPSEFATYLNFCRSLR---FDDKPDYSYLRQ  273 (296)
T ss_dssp             HTTTSCHHHHHHHHHHHTSC---TTCCCCHHHHHH
T ss_pred             hhccCCHHHHHHHHHHHhcC---CCCCCCHHHHHH
Confidence            33667899999999999999   999999999986


No 231
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.4e-40  Score=354.91  Aligned_cols=249  Identities=29%  Similarity=0.439  Sum_probs=205.8

Q ss_pred             eeEEEEeeecCcEEEEEEEECCceEEEEEeeccC--CCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEeeC
Q 002331          678 LVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQD--FSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEFL  755 (935)
Q Consensus       678 y~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~--~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmEy~  755 (935)
                      |..++.||+|+||.||+|.++++.||||++....  ........+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  112 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM  112 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence            4456889999999999999999999999987542  23345667899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc--c
Q 002331          756 PRGSLFRILHRP--HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF--L  831 (935)
Q Consensus       756 ~gGsL~dlL~~~--~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~--~  831 (935)
                      ++++|.+++...  ...+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||++.......  .
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence            999999998642  346899999999999999999999999  9999999999999999999999999998654321  1


Q ss_pred             cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhhc---------cccccCCC
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQ----VVGAVGF---------QNRRLEIP  898 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~e----il~~I~~---------~~~r~~ip  898 (935)
                      ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.......    +...+..         .......+
T Consensus       191 ~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (307)
T 2nru_A          191 MTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD  269 (307)
T ss_dssp             ECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred             cccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccc
Confidence            22345789999999998764 7889999999999999999999998754322    1111110         01112233


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..++..+.++|.+||+.|   |.+||++.+|+++
T Consensus       270 ~~~~~~l~~li~~cl~~~---p~~Rps~~~l~~~  300 (307)
T 2nru_A          270 STSVEAMYSVASQCLHEK---KNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSS---TTTSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHcCCC---cccCcCHHHHHHH
Confidence            456678999999999999   9999999999875


No 232
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=357.33  Aligned_cols=254  Identities=20%  Similarity=0.283  Sum_probs=206.2

Q ss_pred             cCCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccc----c
Q 002331          671 CEIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVT----R  744 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~----~  744 (935)
                      +.+..++|++.+.||+|+||.||++++  +++.||||++...  .......+.+|+.+++.++||||+++++++.    .
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            345668899999999999999999986  6889999988654  3455677899999999999999999999986    3


Q ss_pred             CCceEEEEeeCCCCCHHHHHcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecc
Q 002331          745 PPNLSIITEFLPRGSLFRILHR---PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFG  821 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~---~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFG  821 (935)
                      ...+++||||+++++|.+++.+   ....+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg  179 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLG  179 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCS
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecC
Confidence            4568999999999999998864   3567999999999999999999999998  9999999999999999999999999


Q ss_pred             ccccccCCccc---------CCCCCCCCCccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHH
Q 002331          822 LSRLKHNTFLS---------SKSTAGTPEWMAPEVLRNEP---SNEKCDVYSFGVILWELATLKLPWIGMNP--MQVVGA  887 (935)
Q Consensus       822 lA~~~~~~~~~---------~~s~~GT~~Y~APEvl~g~~---~s~ksDIWSLG~ILyELLTG~~PF~~~~~--~eil~~  887 (935)
                      ++.........         .....||+.|+|||++.+..   ++.++|||||||++|+|++|+.||.....  ......
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  259 (317)
T 2buj_A          180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA  259 (317)
T ss_dssp             SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH
T ss_pred             cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH
Confidence            98764321100         11235799999999997654   68899999999999999999999964211  111111


Q ss_pred             hhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          888 VGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       888 I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +. .......+..+++.+.+||.+||+.|   |.+||++.+|+++
T Consensus       260 ~~-~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~ll~~  300 (317)
T 2buj_A          260 VQ-NQLSIPQSPRHSSALWQLLNSMMTVD---PHQRPHIPLLLSQ  300 (317)
T ss_dssp             HH-CC--CCCCTTSCHHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             hh-ccCCCCccccCCHHHHHHHHHHhhcC---hhhCCCHHHHHHH
Confidence            21 22334445678999999999999999   9999999999976


No 233
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=6.8e-41  Score=362.69  Aligned_cols=247  Identities=20%  Similarity=0.344  Sum_probs=210.5

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCH----HHHHHHHHHHHHHHHcC--CCceeeeecccc
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSG----AALLEFKREVKIMRRLR--HPNVVLFMGAVT  743 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~----~~~~~f~~Ei~iL~~L~--HPNIVkl~g~~~  743 (935)
                      +...++|++++.||+|+||.||+|.+  +++.||||++.......    .....+.+|+.++++++  |+||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34567899999999999999999987  68899999987654322    12234667999999996  599999999999


Q ss_pred             cCCceEEEEeeCCC-CCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec-CCCcEEEEecc
Q 002331          744 RPPNLSIITEFLPR-GSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD-KNWNVKVSDFG  821 (935)
Q Consensus       744 ~~~~l~LVmEy~~g-GsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd-~~g~VKL~DFG  821 (935)
                      ..+.+++||||+.+ ++|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||||+ .++.+||+|||
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg  195 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG  195 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCT
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence            99999999999976 8999998753 46899999999999999999999999  99999999999999 78999999999


Q ss_pred             ccccccCCcccCCCCCCCCCccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCc
Q 002331          822 LSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPS-NEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKE  900 (935)
Q Consensus       822 lA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~-s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~  900 (935)
                      +++......  .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.....  ..      .....++..
T Consensus       196 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~------~~~~~~~~~  265 (320)
T 3a99_A          196 SGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--II------RGQVFFRQR  265 (320)
T ss_dssp             TCEECCSSC--BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HH------HCCCCCSSC
T ss_pred             ccccccccc--ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hh------ccccccccc
Confidence            998765432  234679999999999987665 6889999999999999999999976431  11      223456678


Q ss_pred             CcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          901 LDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       901 ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      +++.+.+||.+||+.|   |.+||++++|++|||
T Consensus       266 ~~~~~~~li~~~l~~d---p~~Rps~~~ll~hp~  296 (320)
T 3a99_A          266 VSSECQHLIRWCLALR---PSDRPTFEEIQNHPW  296 (320)
T ss_dssp             CCHHHHHHHHHHTCSS---GGGSCCHHHHHTSGG
T ss_pred             CCHHHHHHHHHHccCC---hhhCcCHHHHhcCHh
Confidence            8999999999999999   999999999999998


No 234
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.3e-40  Score=354.99  Aligned_cols=252  Identities=30%  Similarity=0.491  Sum_probs=211.7

Q ss_pred             CCCCCCeeEEEEeeecCcEEEEEEEE------CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          672 EIPWEDLVLGERIGLGSYGEVYHADW------NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       672 ei~~edy~I~e~LG~G~fG~Vyka~~------~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      .+..++|++++.||+|+||.||++++      .++.||||++....  ......+.+|+.++++++||||+++++++...
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            45567899999999999999999984      57889999987642  34566789999999999999999999988665


Q ss_pred             C--ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEecccc
Q 002331          746 P--NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLS  823 (935)
Q Consensus       746 ~--~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA  823 (935)
                      +  .+++||||+++++|.+++.+....+++..++.++.||+.||.|||+++  |+||||||+||||+.++.+||+|||++
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcch
Confidence            4  789999999999999999876667999999999999999999999998  999999999999999999999999999


Q ss_pred             ccccCCcc---cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----------------HH
Q 002331          824 RLKHNTFL---SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPM----------------QV  884 (935)
Q Consensus       824 ~~~~~~~~---~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~----------------ei  884 (935)
                      ........   ......++..|+|||++.+..++.++|||||||++|+|++|..||......                .+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence            87654321   123345777899999999988999999999999999999999998643111                11


Q ss_pred             HHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          885 VGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       885 l~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ...+ ....+...+..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       273 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~el~~  315 (326)
T 2w1i_A          273 IELL-KNNGRLPRPDGCPDEIYMIMTECWNNN---VNQRPSFRDLAL  315 (326)
T ss_dssp             HHHH-HTTCCCCCCTTCCHHHHHHHHHHSCSS---GGGSCCHHHHHH
T ss_pred             HHHh-hcCCCCCCCCcccHHHHHHHHHHcCCC---hhhCcCHHHHHH
Confidence            1111 233455677889999999999999999   999999999986


No 235
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6.1e-40  Score=390.58  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=214.1

Q ss_pred             CCCCCCeeEE-EEeeecCcEEEEEEEE----CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC
Q 002331          672 EIPWEDLVLG-ERIGLGSYGEVYHADW----NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP  746 (935)
Q Consensus       672 ei~~edy~I~-e~LG~G~fG~Vyka~~----~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~  746 (935)
                      .+....+.+. +.||+|+||.||+|.+    .++.||||+++...........+.+|+.+|++++|||||++++++.. +
T Consensus       364 ~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~  442 (635)
T 4fl3_A          364 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E  442 (635)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-S
T ss_pred             cccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            3444555554 4899999999999965    35789999998765555556789999999999999999999999965 5


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccc
Q 002331          747 NLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      .++|||||+++|+|.+++... ..+++..++.|+.||+.||.|||+++  ||||||||+||||+.++.+||+|||+++..
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~  519 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKAL  519 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred             CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence            689999999999999999753 46899999999999999999999999  999999999999999999999999999876


Q ss_pred             cCCc---ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCc
Q 002331          827 HNTF---LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELD  902 (935)
Q Consensus       827 ~~~~---~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls  902 (935)
                      ....   .......+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+.+..++...+. ...+..+|..++
T Consensus       520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~  598 (635)
T 4fl3_A          520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCP  598 (635)
T ss_dssp             TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCC
T ss_pred             ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCC
Confidence            4322   11223356788999999999999999999999999999998 999999999888777664 455677888999


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      +++.+||.+||+.|   |.+||++.+|++
T Consensus       599 ~~l~~li~~cl~~d---P~~RPs~~~l~~  624 (635)
T 4fl3_A          599 REMYDLMNLCWTYD---VENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHHHHHTCSS---TTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCC---HhHCcCHHHHHH
Confidence            99999999999999   999999999976


No 236
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=5.2e-40  Score=361.56  Aligned_cols=246  Identities=16%  Similarity=0.165  Sum_probs=202.1

Q ss_pred             cccCCCCCCeeEEEEeeecCcEEEEEEE-------ECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC---CCceeee
Q 002331          669 CECEIPWEDLVLGERIGLGSYGEVYHAD-------WNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR---HPNVVLF  738 (935)
Q Consensus       669 ~~~ei~~edy~I~e~LG~G~fG~Vyka~-------~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~---HPNIVkl  738 (935)
                      ..+++..++|.+.+.||+|+||+||+|.       ..++.||||++....     ...+.+|+.+++.++   |+||+++
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~  132 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKF  132 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCE
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhh
Confidence            3456677899999999999999999993       267899999986543     345778888888886   8999999


Q ss_pred             ecccccCCceEEEEeeCCCCCHHHHHcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---
Q 002331          739 MGAVTRPPNLSIITEFLPRGSLFRILHR----PHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---  811 (935)
Q Consensus       739 ~g~~~~~~~l~LVmEy~~gGsL~dlL~~----~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---  811 (935)
                      ++++...+..||||||+++|+|.+++..    ....+++..++.|+.||+.||+|||+++  ||||||||+||||+.   
T Consensus       133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~  210 (365)
T 3e7e_A          133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFL  210 (365)
T ss_dssp             EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGT
T ss_pred             heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEeccccc
Confidence            9999999999999999999999999963    3457999999999999999999999998  999999999999998   


Q ss_pred             --------CCcEEEEeccccccccC--CcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 002331          812 --------NWNVKVSDFGLSRLKHN--TFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP  881 (935)
Q Consensus       812 --------~g~VKL~DFGlA~~~~~--~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~  881 (935)
                              ++.+||+|||+++....  ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  290 (365)
T 3e7e_A          211 EQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG  290 (365)
T ss_dssp             CC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred             CccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence                    89999999999975431  22233456899999999999999999999999999999999999999975433


Q ss_pred             HHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHH
Q 002331          882 MQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLS  930 (935)
Q Consensus       882 ~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EIL  930 (935)
                      ...      ...........++.+.+++..||+.+   |.+|+...+.+
T Consensus       291 ~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~---p~~r~~~~~~l  330 (365)
T 3e7e_A          291 GEC------KPEGLFRRLPHLDMWNEFFHVMLNIP---DCHHLPSLDLL  330 (365)
T ss_dssp             TEE------EECSCCTTCSSHHHHHHHHHHHHCCC---CTTCCCCHHHH
T ss_pred             Cce------eechhccccCcHHHHHHHHHHHcCCC---CCCcchHHHHH
Confidence            210      00011111134788999999999999   99995443333


No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=6.3e-40  Score=358.35  Aligned_cols=246  Identities=24%  Similarity=0.349  Sum_probs=177.9

Q ss_pred             CCeeEE-EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc----CCce
Q 002331          676 EDLVLG-ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR----PPNL  748 (935)
Q Consensus       676 edy~I~-e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~----~~~l  748 (935)
                      ++|.+. +.||+|+||.||+|.+  +++.||||++....   ..   .......++.++||||+++++++..    ...+
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KA---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            678885 4699999999999987  48899999986532   11   1222334566799999999999875    4458


Q ss_pred             EEEEeeCCCCCHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEeccccc
Q 002331          749 SIITEFLPRGSLFRILHRPH-CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLSR  824 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~-~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA~  824 (935)
                      ++||||+++|+|.+++.+.. ..+++..++.|+.||+.||.|||++|  |+||||||+||||+.   ++.+||+|||+++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence            99999999999999997643 46999999999999999999999999  999999999999975   4569999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH----Hhhccc--cccCCC
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVG----AVGFQN--RRLEIP  898 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~----~I~~~~--~r~~ip  898 (935)
                      .....  ......||+.|+|||++.+..++.++|||||||++|+|++|..||..........    .+....  .+....
T Consensus       180 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
T 3fhr_A          180 ETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW  257 (336)
T ss_dssp             EC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTS
T ss_pred             ecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhh
Confidence            65433  2234578999999999988889999999999999999999999998766544321    111111  112223


Q ss_pred             CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 ~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       258 ~~~~~~~~~li~~~L~~d---P~~Rpt~~ell~hp~  290 (336)
T 3fhr_A          258 SEVSEDAKQLIRLLLKTD---PTERLTITQFMNHPW  290 (336)
T ss_dssp             TTCCHHHHHHHHHHSCSS---GGGSCCHHHHHHSHH
T ss_pred             ccCCHHHHHHHHHHCCCC---hhHCcCHHHHhcCcc
Confidence            578999999999999999   999999999999998


No 238
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.4e-40  Score=367.07  Aligned_cols=251  Identities=24%  Similarity=0.365  Sum_probs=205.7

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCC--ceEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPP--NLSI  750 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~--~l~L  750 (935)
                      .++|++.+.||+|+||.||+|++.  ++.||||++...... .....+.+|+.+|++++||||+++++++....  .+++
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            468999999999999999999874  889999998754322 22456779999999999999999999987655  6899


Q ss_pred             EEeeCCCCCHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee----cCCCcEEEEeccccc
Q 002331          751 ITEFLPRGSLFRILHRPH--CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV----DKNWNVKVSDFGLSR  824 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~--~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL----d~~g~VKL~DFGlA~  824 (935)
                      ||||+++++|.+++.+..  ..+++..++.|+.||+.||.|||++|  |+||||||+||||    +.++.+||+|||+++
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999997632  23899999999999999999999999  9999999999999    788889999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccC--------CCCCchhHHHHHHHHHHHHHcCCCCCCCC----ChHHHHHHhhccc
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRN--------EPSNEKCDVYSFGVILWELATLKLPWIGM----NPMQVVGAVGFQN  892 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g--------~~~s~ksDIWSLG~ILyELLTG~~PF~~~----~~~eil~~I~~~~  892 (935)
                      ...... ......||+.|+|||++.+        ..++.++|||||||++|+|++|+.||...    ...++...+....
T Consensus       165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            765442 2345679999999999875        45678999999999999999999999753    2233443332111


Q ss_pred             cc-----------------------cCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          893 RR-----------------------LEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       893 ~r-----------------------~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      ..                       ..++..++..+.++|.+||+.|   |.+||++.+++++
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~d---P~~R~s~~e~l~~  303 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD---QEKCWGFDQFFAE  303 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCC---TTTSCCHHHHHHH
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccC---hhhhccHHHHHHH
Confidence            10                       1122446678999999999999   9999999998754


No 239
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.4e-42  Score=363.32  Aligned_cols=245  Identities=36%  Similarity=0.618  Sum_probs=187.8

Q ss_pred             CCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHH--cCCCceeeeecccccCC----ceE
Q 002331          676 EDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRR--LRHPNVVLFMGAVTRPP----NLS  749 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~--L~HPNIVkl~g~~~~~~----~l~  749 (935)
                      ++|++.+.||+|+||.||+|+++++.||||++....     ...+.+|.+++..  ++||||+++++++....    .++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT-----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEEcCcceEEEEecccc-----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            578899999999999999999999999999976432     3456678888877  79999999999998776    789


Q ss_pred             EEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCEEeeCCCCCCeeecCCCcEEEEecc
Q 002331          750 IITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLH--------TSTPTIVHRDLKSPNLLVDKNWNVKVSDFG  821 (935)
Q Consensus       750 LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLH--------s~g~~IIHrDLKPeNILLd~~g~VKL~DFG  821 (935)
                      +||||+++|+|.+++.+  ..+++..++.++.|++.||.|||        +.+  |+||||||+||||+.++.+||+|||
T Consensus        78 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~DFg  153 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred             EEEeccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEeecC
Confidence            99999999999999975  35788889999999999999999        877  9999999999999999999999999


Q ss_pred             ccccccCCccc----CCCCCCCCCccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCCCCCh
Q 002331          822 LSRLKHNTFLS----SKSTAGTPEWMAPEVLRNE------PSNEKCDVYSFGVILWELATL----------KLPWIGMNP  881 (935)
Q Consensus       822 lA~~~~~~~~~----~~s~~GT~~Y~APEvl~g~------~~s~ksDIWSLG~ILyELLTG----------~~PF~~~~~  881 (935)
                      +++........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.....
T Consensus       154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~  233 (303)
T 3gxj_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred             cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence            99765443221    2334799999999999876      334689999999999999999          778865422


Q ss_pred             -----HHHHHHhhccccccCCCC-----cCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          882 -----MQVVGAVGFQNRRLEIPK-----ELDPLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       882 -----~eil~~I~~~~~r~~ip~-----~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                           .++...+.....++.++.     .+++.+.+||.+||+.|   |.+||++.+|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d---P~~Rps~~~i~~~  291 (303)
T 3gxj_A          234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN---GAARLTALRIKKT  291 (303)
T ss_dssp             -CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSS---GGGSCCHHHHHHH
T ss_pred             CCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccC---cccCCCHHHHHHH
Confidence                 233333333344444544     34568999999999999   9999999999863


No 240
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.7e-40  Score=358.04  Aligned_cols=246  Identities=15%  Similarity=0.162  Sum_probs=201.3

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEEC----------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceee-----
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADWN----------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVL-----  737 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~~----------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVk-----  737 (935)
                      ...++|++.+.||+|+||.||+|++.          ++.||||++...       ..+.+|+.++++++||||++     
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~  111 (352)
T 2jii_A           39 KSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKL  111 (352)
T ss_dssp             TTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhh
Confidence            34578999999999999999999873          678999998755       25778999999999999998     


Q ss_pred             ----------eeccccc-CCceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCC
Q 002331          738 ----------FMGAVTR-PPNLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSP  805 (935)
Q Consensus       738 ----------l~g~~~~-~~~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPe  805 (935)
                                +++++.. ...+++||||+ +++|.+++... ...+++..++.|+.||+.||.|||+++  |+||||||+
T Consensus       112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~  188 (352)
T 2jii_A          112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAE  188 (352)
T ss_dssp             TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGG
T ss_pred             ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHH
Confidence                      4445544 67789999999 99999999764 357999999999999999999999998  999999999


Q ss_pred             CeeecCCC--cEEEEeccccccccCCcc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002331          806 NLLVDKNW--NVKVSDFGLSRLKHNTFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPW  876 (935)
Q Consensus       806 NILLd~~g--~VKL~DFGlA~~~~~~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF  876 (935)
                      ||||+.++  .+||+|||+++.......       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  268 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW  268 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            99999998  999999999986543211       123447999999999999999999999999999999999999999


Q ss_pred             CCCC--hHHHHHHhh-ccccccCCC------CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          877 IGMN--PMQVVGAVG-FQNRRLEIP------KELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       877 ~~~~--~~eil~~I~-~~~~r~~ip------~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      ....  ...+..... .......++      ..+++.+.+||.+||+.|   |.+||++.+|++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d---p~~Rps~~~l~~  329 (352)
T 2jii_A          269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALT---YEEKPPYAMLRN  329 (352)
T ss_dssp             GGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCC---TTCCCCHHHHHH
T ss_pred             ccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCC---hhhCCCHHHHHH
Confidence            8764  333322221 111122221      256899999999999999   999999999976


No 241
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1e-39  Score=371.08  Aligned_cols=253  Identities=25%  Similarity=0.341  Sum_probs=201.4

Q ss_pred             cCCCCCCeeEEEEeeecCcEE-EEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCce
Q 002331          671 CEIPWEDLVLGERIGLGSYGE-VYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNL  748 (935)
Q Consensus       671 ~ei~~edy~I~e~LG~G~fG~-Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l  748 (935)
                      +.+...+|.+.+.||+|+||+ ||++..+++.||||++......     .+.+|+.+|+.+ +|||||++++++.+...+
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~   93 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQ   93 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred             EEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence            445566899999999999998 5556678999999998654322     246899999999 899999999999999999


Q ss_pred             EEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC-----CCcEEEEecccc
Q 002331          749 SIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK-----NWNVKVSDFGLS  823 (935)
Q Consensus       749 ~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~-----~g~VKL~DFGlA  823 (935)
                      |||||||. |+|.+++......+.+..++.|+.||+.||.|||+++  |+||||||+||||+.     ...+||+|||++
T Consensus        94 ~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           94 YIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             EEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             EEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            99999996 5999999876656666677889999999999999999  999999999999953     346889999999


Q ss_pred             ccccCCc---ccCCCCCCCCCccCcccccC---CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccc-c
Q 002331          824 RLKHNTF---LSSKSTAGTPEWMAPEVLRN---EPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRR-L  895 (935)
Q Consensus       824 ~~~~~~~---~~~~s~~GT~~Y~APEvl~g---~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r-~  895 (935)
                      +......   .......||+.|+|||++.+   ..++.++|||||||++|+|++ |..||...........+...... .
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~  250 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL  250 (432)
T ss_dssp             ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTS
T ss_pred             eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcccc
Confidence            8764321   22344679999999999974   557889999999999999999 89999776555443333211111 1


Q ss_pred             CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          896 EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       896 ~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ..+...+..+.+||.+||+.|   |.+||++.+|++|||
T Consensus       251 ~~~~~~~~~~~~li~~~L~~d---P~~Rps~~evl~hp~  286 (432)
T 3p23_A          251 HPEKHEDVIARELIEKMIAMD---PQKRPSAKHVLKHPF  286 (432)
T ss_dssp             CTTCHHHHHHHHHHHHHSCSS---GGGSCCHHHHHTSTT
T ss_pred             CccccccHHHHHHHHHHHhCC---HhhCCCHHHHHhCcc
Confidence            122345677999999999999   999999999999998


No 242
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.2e-39  Score=383.21  Aligned_cols=255  Identities=29%  Similarity=0.483  Sum_probs=218.3

Q ss_pred             ccCCCCCCeeEEEEeeecCcEEEEEEEEC-----CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc
Q 002331          670 ECEIPWEDLVLGERIGLGSYGEVYHADWN-----GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR  744 (935)
Q Consensus       670 ~~ei~~edy~I~e~LG~G~fG~Vyka~~~-----g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~  744 (935)
                      .+++..++|++++.||+|+||.||+|.+.     +..||||++.... .......+.+|+.+|++++||||+++++++.+
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITE  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            34566789999999999999999999873     3469999876532 44556788999999999999999999999854


Q ss_pred             CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          745 PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       745 ~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                       +.+++||||+++|+|.+++......+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+++
T Consensus       463 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          463 -NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             -CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCe
Confidence             5789999999999999999866667999999999999999999999999  9999999999999999999999999998


Q ss_pred             cccCCcc-cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCcCc
Q 002331          825 LKHNTFL-SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELAT-LKLPWIGMNPMQVVGAVGFQNRRLEIPKELD  902 (935)
Q Consensus       825 ~~~~~~~-~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~eil~~I~~~~~r~~ip~~ls  902 (935)
                      ....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+. ...+..++..++
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~  618 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCP  618 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-HTCCCCCCTTCC
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCCCCCCcccc
Confidence            7654322 2223456789999999999999999999999999999997 999999998888877764 345566788999


Q ss_pred             HHHHHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          903 PLVARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       903 ~~L~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      +.+.+||.+||..|   |.+||++.+|++.
T Consensus       619 ~~l~~li~~~l~~d---P~~RPs~~el~~~  645 (656)
T 2j0j_A          619 PTLYSLMTKCWAYD---PSRRPRFTELKAQ  645 (656)
T ss_dssp             HHHHHHHHHHTCSS---GGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCC---hhHCcCHHHHHHH
Confidence            99999999999999   9999999999864


No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.2e-38  Score=361.41  Aligned_cols=246  Identities=24%  Similarity=0.328  Sum_probs=191.1

Q ss_pred             CCeeEEEEeeecCcEEEEEE-EECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEEEe
Q 002331          676 EDLVLGERIGLGSYGEVYHA-DWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka-~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      +.|.+.+.||+|+||+||.+ ..+|+.||||++....     ...+.+|+.+|+.+ +|||||++++++.+...+|||||
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            45667899999999999655 5589999999986542     34567899999876 89999999999999999999999


Q ss_pred             eCCCCCHHHHHcCCCCCC------CHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCC-------------Cc
Q 002331          754 FLPRGSLFRILHRPHCQV------DEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKN-------------WN  814 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~l------se~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~-------------g~  814 (935)
                      ||. |+|.+++.......      .+..++.|+.||+.||.|||+++  |+||||||+||||+.+             +.
T Consensus        90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccCCCceE
Confidence            996 59999997643211      22345679999999999999999  9999999999999754             48


Q ss_pred             EEEEeccccccccCCcc----cCCCCCCCCCccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 002331          815 VKVSDFGLSRLKHNTFL----SSKSTAGTPEWMAPEVLRN-------EPSNEKCDVYSFGVILWELAT-LKLPWIGMNPM  882 (935)
Q Consensus       815 VKL~DFGlA~~~~~~~~----~~~s~~GT~~Y~APEvl~g-------~~~s~ksDIWSLG~ILyELLT-G~~PF~~~~~~  882 (935)
                      +||+|||+++.......    ......||+.|+|||++.+       ..++.++|||||||++|||++ |..||......
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~  246 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR  246 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence            99999999987654321    1234579999999999976       568999999999999999999 89999876544


Q ss_pred             HHHHHhhcccccc-C----CCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          883 QVVGAVGFQNRRL-E----IPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       883 eil~~I~~~~~r~-~----ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...  +....... .    .+..+++++.+||.+||+.|   |.+||++.+|++|||
T Consensus       247 ~~~--i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d---P~~Rps~~eil~hp~  298 (434)
T 2rio_A          247 ESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD---PLKRPTAMKVLRHPL  298 (434)
T ss_dssp             HHH--HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS---GGGSCCHHHHHTSGG
T ss_pred             HHH--HhcCCCCcccccccccccchHHHHHHHHHHhhCC---hhhCCCHHHHHhCCc
Confidence            321  11111111 1    12245688999999999999   999999999999998


No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.9e-38  Score=366.77  Aligned_cols=247  Identities=21%  Similarity=0.269  Sum_probs=205.9

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCC-CceeeeecccccCCceEEE
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRH-PNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~H-PNIVkl~g~~~~~~~l~LV  751 (935)
                      .++|+++++||+|+||.||+|++  +++.||||++.......    .+.+|+++++.|+| ++|..+..++...+..+||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv   81 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV   81 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence            47899999999999999999986  58899999887654322    46789999999976 6666666677778889999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeee---cCCCcEEEEeccccccccC
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLV---DKNWNVKVSDFGLSRLKHN  828 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILL---d~~g~VKL~DFGlA~~~~~  828 (935)
                      |||+ +++|.+++......+++..++.|+.||+.||.|||+++  ||||||||+||||   +.++.+||+|||+++....
T Consensus        82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            9999 88999999865668999999999999999999999999  9999999999999   6889999999999987654


Q ss_pred             Ccc-------cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhcc---cccc
Q 002331          829 TFL-------SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNP---MQVVGAVGFQ---NRRL  895 (935)
Q Consensus       829 ~~~-------~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~---~eil~~I~~~---~~r~  895 (935)
                      ...       ......||+.|+|||++.+..++.++|||||||+||||++|+.||.+...   .+.+..+...   ....
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  238 (483)
T 3sv0_A          159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE  238 (483)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence            321       12356799999999999999999999999999999999999999987544   2223222111   1112


Q ss_pred             CCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHh
Q 002331          896 EIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSH  931 (935)
Q Consensus       896 ~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILq  931 (935)
                      .++..+++++.+||.+||+.+   |.+||++.+|++
T Consensus       239 ~l~~~~p~~l~~li~~cl~~d---P~~RPs~~el~~  271 (483)
T 3sv0_A          239 ALCRGYPTEFASYFHYCRSLR---FDDKPDYSYLKR  271 (483)
T ss_dssp             HHHTTSCHHHHHHHHHHHTCC---TTCCCCHHHHHH
T ss_pred             HHhcCCcHHHHHHHHHHhcCC---hhhCcCHHHHHH
Confidence            233678899999999999999   999999999875


No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.5e-38  Score=336.49  Aligned_cols=225  Identities=24%  Similarity=0.387  Sum_probs=184.4

Q ss_pred             CCeeEE-EEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHH-HHcCCCceeeeeccccc----CCc
Q 002331          676 EDLVLG-ERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIM-RRLRHPNVVLFMGAVTR----PPN  747 (935)
Q Consensus       676 edy~I~-e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL-~~L~HPNIVkl~g~~~~----~~~  747 (935)
                      ++|.+. +.||+|+||.||++.+  +++.||||++...       ..+.+|+.++ +.++||||+++++++..    ...
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            567776 8899999999999987  6789999998643       2456788888 55599999999999876    677


Q ss_pred             eEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecC---CCcEEEEecccc
Q 002331          748 LSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDK---NWNVKVSDFGLS  823 (935)
Q Consensus       748 l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~---~g~VKL~DFGlA  823 (935)
                      +++||||+++++|.+++.+. ...+++..++.++.||+.||.|||+++  |+||||||+||||+.   ++.+||+|||++
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            99999999999999999754 346999999999999999999999999  999999999999997   789999999998


Q ss_pred             ccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--cccccCCC---
Q 002331          824 RLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGF--QNRRLEIP---  898 (935)
Q Consensus       824 ~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~--~~~r~~ip---  898 (935)
                      ....                      +..++.++|||||||++|+|++|+.||.+.........+..  ......++   
T Consensus       168 ~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (299)
T 3m2w_A          168 KETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  225 (299)
T ss_dssp             EECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred             cccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence            6432                      23467899999999999999999999988765543322211  11122233   


Q ss_pred             -CcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          899 -KELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       899 -~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                       ..+++.+.+||.+||+.|   |.+||++.++|+|||
T Consensus       226 ~~~~~~~~~~li~~~l~~d---P~~Rps~~e~l~hp~  259 (299)
T 3m2w_A          226 WSEVSEEVKMLIRNLLKTE---PTQRMTITEFMNHPW  259 (299)
T ss_dssp             HTTSCHHHHHHHHHHTCSS---TTTSCCHHHHHTSHH
T ss_pred             cccCCHHHHHHHHHHcccC---hhhCCCHHHHhcChh
Confidence             568999999999999999   999999999999998


No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.7e-39  Score=352.96  Aligned_cols=244  Identities=18%  Similarity=0.176  Sum_probs=194.2

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCC------CHHHHHHHHHHHHHHHHcC---------------
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDF------SGAALLEFKREVKIMRRLR---------------  731 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~------~~~~~~~f~~Ei~iL~~L~---------------  731 (935)
                      +..++|++++.||+|+||+||+|+++++.||||++.....      .......+.+|+.+|+.++               
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            3457899999999999999999999999999999986542      1223467888999998886               


Q ss_pred             -----------CCceeeeeccccc-------------CCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Q 002331          732 -----------HPNVVLFMGAVTR-------------PPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGM  787 (935)
Q Consensus       732 -----------HPNIVkl~g~~~~-------------~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL  787 (935)
                                 ||||++++++|.+             .+.+||||||+++|++.+.+.+  ..+++..++.|+.||+.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence                       5666666666654             7789999999999977666644  4689999999999999999


Q ss_pred             HHHH-hcCCCEEeeCCCCCCeeecCCC--------------------cEEEEeccccccccCCcccCCCCCCCCCccCcc
Q 002331          788 NCLH-TSTPTIVHRDLKSPNLLVDKNW--------------------NVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPE  846 (935)
Q Consensus       788 ~yLH-s~g~~IIHrDLKPeNILLd~~g--------------------~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APE  846 (935)
                      .||| +++  |+||||||+||||+.++                    .+||+|||+++.....     ..+||+.|+|||
T Consensus       175 ~~lH~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE  247 (336)
T 2vuw_A          175 AVAEASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSG
T ss_pred             HHHHHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChh
Confidence            9999 898  99999999999999887                    8999999999876543     347999999999


Q ss_pred             cccCCCCCchhHHHHHHHH-HHHHHcCCCCCCCCCh-HHHHHHhhcc-ccc----cCCCCcCcHHHHHHHHHHHhhCCCC
Q 002331          847 VLRNEPSNEKCDVYSFGVI-LWELATLKLPWIGMNP-MQVVGAVGFQ-NRR----LEIPKELDPLVARIIWECWQTGWSS  919 (935)
Q Consensus       847 vl~g~~~s~ksDIWSLG~I-LyELLTG~~PF~~~~~-~eil~~I~~~-~~r----~~ip~~ls~~L~dLI~qCL~~D~ss  919 (935)
                      ++.+.. +.++|||||+++ .++++.|..||.+... ......+... ...    ..++..+++++++||.+||+.|   
T Consensus       248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d---  323 (336)
T 2vuw_A          248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS---  323 (336)
T ss_dssp             GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS---
T ss_pred             hhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC---
Confidence            999877 899999998777 7888999999865322 1111121100 111    1122457889999999999865   


Q ss_pred             cCCCcCHHHHH-hCcC
Q 002331          920 LHIRTSQAQLS-HKRF  934 (935)
Q Consensus       920 P~kRPSa~EIL-qHPF  934 (935)
                           |++|+| +|||
T Consensus       324 -----sa~e~l~~Hp~  334 (336)
T 2vuw_A          324 -----SATDLLCQHSL  334 (336)
T ss_dssp             -----SHHHHHHHCGG
T ss_pred             -----CHHHHHhcCCC
Confidence                 999999 9998


No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.4e-38  Score=356.69  Aligned_cols=246  Identities=17%  Similarity=0.131  Sum_probs=193.6

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcCC-Cceeee----------
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLRH-PNVVLF----------  738 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~H-PNIVkl----------  738 (935)
                      .....|.+++.||+|+||+||+|++.  |+.||||++..... .....+.+.+|+.+++.++| +|+..+          
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence            44567899999999999999999974  89999999874332 22345678899999999977 322111          


Q ss_pred             -----------eccccc-----CCceEEEEeeCCCCCHHHHHc------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 002331          739 -----------MGAVTR-----PPNLSIITEFLPRGSLFRILH------RPHCQVDEKRRIKMALDVARGMNCLHTSTPT  796 (935)
Q Consensus       739 -----------~g~~~~-----~~~l~LVmEy~~gGsL~dlL~------~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~  796 (935)
                                 +.++..     ...++++|+++ +++|.+++.      ..+..+++..++.|+.||+.||.|||+++  
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--  231 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--  231 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence                       111111     22467777766 679999884      33445788899999999999999999999  


Q ss_pred             EEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccc----------cCCCCCchhHHHHHHHHH
Q 002331          797 IVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVL----------RNEPSNEKCDVYSFGVIL  866 (935)
Q Consensus       797 IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl----------~g~~~s~ksDIWSLG~IL  866 (935)
                      ||||||||+||||+.++.+||+|||+++.....   ....+| +.|+|||++          .+..++.++|||||||++
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            999999999999999999999999999876543   334577 999999999          555688899999999999


Q ss_pred             HHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          867 WELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       867 yELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      |+|++|+.||...+.......+      ......+++.+.+||.+||+.|   |.+||++.++++|||
T Consensus       308 ~elltg~~Pf~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~d---P~~Rpt~~~~l~~~~  366 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYP---KEDRLLPLQAMETPE  366 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSCSGGG------GSSCCCCCHHHHHHHHHHTCSS---GGGSCCHHHHTTSHH
T ss_pred             HHHHHCCCCCCCcchhhhHHHH------HhhcccCCHHHHHHHHHHccCC---hhhCcCHHHHHhCHH
Confidence            9999999999887655433222      1222467899999999999999   999999999999997


No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.3e-37  Score=372.11  Aligned_cols=253  Identities=22%  Similarity=0.274  Sum_probs=205.3

Q ss_pred             CCCeeEEEEeeecCcEEEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccccc------CC
Q 002331          675 WEDLVLGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTR------PP  746 (935)
Q Consensus       675 ~edy~I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~------~~  746 (935)
                      .++|++.+.||+|+||.||+|.+  +++.||||++... ........+.+|+.++++++||||+++++++..      .+
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            37899999999999999999976  6889999988654 345567788999999999999999999998765      67


Q ss_pred             ceEEEEeeCCCCCHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCc---EEEEecc
Q 002331          747 NLSIITEFLPRGSLFRILHRPH--CQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWN---VKVSDFG  821 (935)
Q Consensus       747 ~l~LVmEy~~gGsL~dlL~~~~--~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~---VKL~DFG  821 (935)
                      ..++||||+++++|.+++....  ..+++..++.|+.||+.||.|||+.|  |+||||||+||||+.++.   +||+|||
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            7899999999999999997633  35889999999999999999999999  999999999999987665   9999999


Q ss_pred             ccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH---------Hhh---
Q 002331          822 LSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVG---------AVG---  889 (935)
Q Consensus       822 lA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~---------~I~---  889 (935)
                      ++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+........         .+.   
T Consensus       170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            998765442 2345689999999999999999999999999999999999999997653321100         000   


Q ss_pred             ccc----------cccCCCCcCcHHHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          890 FQN----------RRLEIPKELDPLVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       890 ~~~----------~r~~ip~~ls~~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      ...          .+..++..+++.+.+||.+||..|   |.+||++.++++|||
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D---P~kRPTa~elL~hp~  300 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH---QRQRGTDPQNPNVGC  300 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS---CC---CCTTCCCCTT
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCC---HhhCcCHHHHhcCHH
Confidence            000          011233457889999999999999   999999999999998


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.7e-37  Score=366.49  Aligned_cols=238  Identities=21%  Similarity=0.246  Sum_probs=197.6

Q ss_pred             CCCCCeeEEEEeeecCcEEEEEEEE---CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecccccCCc--
Q 002331          673 IPWEDLVLGERIGLGSYGEVYHADW---NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPN--  747 (935)
Q Consensus       673 i~~edy~I~e~LG~G~fG~Vyka~~---~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~--  747 (935)
                      +..++|++.+.||+|+||.||+|.+   +++.||||++.... .......+.+|+.+|++++|||||+++++|...+.  
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            3457899999999999999999987   47899999886543 34556678899999999999999999999987666  


Q ss_pred             ---eEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          748 ---LSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       748 ---l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                         +||||||+++++|.+++..   .+++..++.|+.||+.||.|||++|  ||||||||+||||+.+ .+||+|||+++
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccch
Confidence               7999999999999988765   6899999999999999999999999  9999999999999885 99999999998


Q ss_pred             cccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC-CCcCcH
Q 002331          825 LKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEI-PKELDP  903 (935)
Q Consensus       825 ~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~i-p~~ls~  903 (935)
                      .....    ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.+.....         ..... ....++
T Consensus       230 ~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------~~~~~~~~~~~~  295 (681)
T 2pzi_A          230 RINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG---------LPEDDPVLKTYD  295 (681)
T ss_dssp             ETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS---------CCTTCHHHHHCH
T ss_pred             hcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc---------ccccccccccCH
Confidence            76543    3467999999999998764 889999999999999999999887532110         00000 012457


Q ss_pred             HHHHHHHHHHhhCCCCcCCCcCHHHHHhCcC
Q 002331          904 LVARIIWECWQTGWSSLHIRTSQAQLSHKRF  934 (935)
Q Consensus       904 ~L~dLI~qCL~~D~ssP~kRPSa~EILqHPF  934 (935)
                      .+.+||.+||+.|   |.+||+..+.+.|+|
T Consensus       296 ~l~~li~~~l~~d---P~~R~~~~~~l~~~l  323 (681)
T 2pzi_A          296 SYGRLLRRAIDPD---PRQRFTTAEEMSAQL  323 (681)
T ss_dssp             HHHHHHHHHTCSS---GGGSCSSHHHHHHHH
T ss_pred             HHHHHHhhhccCC---hhhCCCHHHHHHHHH
Confidence            8999999999999   999998888887765


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.2e-36  Score=323.15  Aligned_cols=223  Identities=15%  Similarity=0.099  Sum_probs=186.4

Q ss_pred             CCCCeeEEEEeeecCcEEEEEEEEC--CceEEEEEeeccCCC-HHHHHHHHHHHHHHHHcCCCceeeeecccccCCceEE
Q 002331          674 PWEDLVLGERIGLGSYGEVYHADWN--GTEVAVKKFLDQDFS-GAALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       674 ~~edy~I~e~LG~G~fG~Vyka~~~--g~~VAVK~i~~~~~~-~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~L  750 (935)
                      ..++|++.+.||+|+||.||+|++.  ++.||||++...... ......+.+|+.++.+++||||+++++++.+.+.+|+
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            3468999999999999999999884  889999999876443 4566788999999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCc
Q 002331          751 ITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTF  830 (935)
Q Consensus       751 VmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~  830 (935)
                      ||||+++++|.+++++.   .....+..|+.||+.||.|||++|  |+||||||+||||+.+|.+||+++|         
T Consensus       109 v~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~---------  174 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPA---------  174 (286)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred             EEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecc---------
Confidence            99999999999999652   456678889999999999999999  9999999999999999999998543         


Q ss_pred             ccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hccccc----cCCCCcCcHHH
Q 002331          831 LSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAV-GFQNRR----LEIPKELDPLV  905 (935)
Q Consensus       831 ~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I-~~~~~r----~~ip~~ls~~L  905 (935)
                                 |++       .++.++|||||||++|+|++|+.||.+.+....+... ......    ..++..+++.+
T Consensus       175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (286)
T 3uqc_A          175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI  236 (286)
T ss_dssp             -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred             -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence                       233       3689999999999999999999999987654321100 000111    12346789999


Q ss_pred             HHHHHHHHhhCCCCcCCCcCHHHHHhC
Q 002331          906 ARIIWECWQTGWSSLHIRTSQAQLSHK  932 (935)
Q Consensus       906 ~dLI~qCL~~D~ssP~kRPSa~EILqH  932 (935)
                      .+||.+||+.|   |.+| ++.++++.
T Consensus       237 ~~li~~~l~~d---P~~R-s~~el~~~  259 (286)
T 3uqc_A          237 SAVAARSVQGD---GGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHHCTT---SSCC-CHHHHHHH
T ss_pred             HHHHHHHcccC---CccC-CHHHHHHH
Confidence            99999999999   9999 99999863


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96  E-value=1.2e-30  Score=307.30  Aligned_cols=185  Identities=16%  Similarity=0.092  Sum_probs=133.4

Q ss_pred             EeeecCcEEEEEEEE--CCceEEEEEeeccCC--------CHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEE
Q 002331          683 RIGLGSYGEVYHADW--NGTEVAVKKFLDQDF--------SGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       683 ~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~--------~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LV  751 (935)
                      .++.|++|.+..++.  -|+.||||++.....        .+...++|.+|+++|+++ .|+||+++++++++++.+|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            467888887777643  689999999976532        123456799999999999 799999999999999999999


Q ss_pred             EeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcc
Q 002331          752 TEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFL  831 (935)
Q Consensus       752 mEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~  831 (935)
                      |||++|++|.++|.+. .++++.   +|+.||+.||+|||++|  ||||||||+||||+.+|++||+|||+++.......
T Consensus       321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred             EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence            9999999999999874 456664   47899999999999999  99999999999999999999999999987765544


Q ss_pred             cCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 002331          832 SSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKL  874 (935)
Q Consensus       832 ~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~  874 (935)
                      ...+.+||+.|+|||++.+. +..++|+|++|+++++|.++..
T Consensus       395 ~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence            45567899999999999875 5578999999999888766543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=7.2e-27  Score=273.40  Aligned_cols=185  Identities=15%  Similarity=0.221  Sum_probs=148.6

Q ss_pred             EEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHH------HHHHHHHHHHHHHHcCCCceeeeecccccCCceEEEEe
Q 002331          680 LGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGA------ALLEFKREVKIMRRLRHPNVVLFMGAVTRPPNLSIITE  753 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~------~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~LVmE  753 (935)
                      ..+.||+|+||.||++++.++.+++|++........      ..+.+.+|+++|++++||||+++..++...+..|||||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            356899999999999998999999998765443321      23458999999999999999966555556777899999


Q ss_pred             eCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCccc-
Q 002331          754 FLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLS-  832 (935)
Q Consensus       754 y~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~-  832 (935)
                      |+++++|.+++.+         ++.|+.||+.||.|||+++  |+||||||+||||+.  .+||+|||+++........ 
T Consensus       420 ~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~  486 (540)
T 3en9_A          420 YINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA  486 (540)
T ss_dssp             CCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred             CCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence            9999999999975         5579999999999999999  999999999999998  9999999999977543211 


Q ss_pred             ------CCCCCCCCCccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002331          833 ------SKSTAGTPEWMAPEVLRN--EPSNEKCDVYSFGVILWELATLKLPWI  877 (935)
Q Consensus       833 ------~~s~~GT~~Y~APEvl~g--~~~s~ksDIWSLG~ILyELLTG~~PF~  877 (935)
                            .....||+.|+|||++.+  ..|+..+|+|+..+-..+.+.++.+|.
T Consensus       487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence                  135679999999999987  567788999999999988887776663


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87  E-value=1.7e-22  Score=217.42  Aligned_cols=145  Identities=19%  Similarity=0.170  Sum_probs=116.5

Q ss_pred             CeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCH----------------HHHHHHHHHHHHHHHcCCCceeeee
Q 002331          677 DLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSG----------------AALLEFKREVKIMRRLRHPNVVLFM  739 (935)
Q Consensus       677 dy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~----------------~~~~~f~~Ei~iL~~L~HPNIVkl~  739 (935)
                      .|.+++.||+|+||.||+|.+ +|+.||||++.......                .....+.+|+.+|++++  | ++++
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            455679999999999999988 58899999986432111                24567889999999998  5 6666


Q ss_pred             cccccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEe
Q 002331          740 GAVTRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSD  819 (935)
Q Consensus       740 g~~~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~D  819 (935)
                      +++.. +..|+||||+++++|.+ +..       .....++.||+.||.|||++|  |+||||||+||||+ ++.+||+|
T Consensus       168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~D  235 (282)
T 1zar_A          168 KVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWIID  235 (282)
T ss_dssp             CEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEECC
T ss_pred             eEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEEE
Confidence            65543 56799999999999998 422       123468999999999999999  99999999999999 99999999


Q ss_pred             ccccccccCCcccCCCCCCCCCccCccccc
Q 002331          820 FGLSRLKHNTFLSSKSTAGTPEWMAPEVLR  849 (935)
Q Consensus       820 FGlA~~~~~~~~~~~s~~GT~~Y~APEvl~  849 (935)
                      ||+++.             +..|.|||.+.
T Consensus       236 FG~a~~-------------~~~~~a~e~l~  252 (282)
T 1zar_A          236 FPQSVE-------------VGEEGWREILE  252 (282)
T ss_dssp             CTTCEE-------------TTSTTHHHHHH
T ss_pred             CCCCeE-------------CCCCCHHHHHH
Confidence            999863             33578899874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78  E-value=6.9e-19  Score=186.23  Aligned_cols=138  Identities=20%  Similarity=0.232  Sum_probs=107.5

Q ss_pred             CeeEEEEeeecCcEEEEEEEE--CCce--EEEEEeeccCCC----------------------HHHHHHHHHHHHHHHHc
Q 002331          677 DLVLGERIGLGSYGEVYHADW--NGTE--VAVKKFLDQDFS----------------------GAALLEFKREVKIMRRL  730 (935)
Q Consensus       677 dy~I~e~LG~G~fG~Vyka~~--~g~~--VAVK~i~~~~~~----------------------~~~~~~f~~Ei~iL~~L  730 (935)
                      -|.+.+.||+|+||.||+|.+  +|+.  ||||+++.....                      ......+.+|+.+|..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            378899999999999999987  8888  999987543211                      11223678999999999


Q ss_pred             CCCce--eeeecccccCCceEEEEeeCCC-C----CHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCEEeeCC
Q 002331          731 RHPNV--VLFMGAVTRPPNLSIITEFLPR-G----SLFRILHRPHCQVDEKRRIKMALDVARGMNCLH-TSTPTIVHRDL  802 (935)
Q Consensus       731 ~HPNI--Vkl~g~~~~~~~l~LVmEy~~g-G----sL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLH-s~g~~IIHrDL  802 (935)
                      .|++|  ..+++.    ...+|||||+.+ |    .|.++...    .++..+..++.||+.||.||| .+|  ||||||
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl  197 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE--LVHADL  197 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence            87754  344432    357899999942 3    77776532    234566789999999999999 888  999999


Q ss_pred             CCCCeeecCCCcEEEEeccccccc
Q 002331          803 KSPNLLVDKNWNVKVSDFGLSRLK  826 (935)
Q Consensus       803 KPeNILLd~~g~VKL~DFGlA~~~  826 (935)
                      ||+||||+.  .++|+|||++...
T Consensus       198 kp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEET
T ss_pred             CHHHEEEcC--cEEEEECcccccC
Confidence            999999998  9999999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64  E-value=1.5e-16  Score=179.68  Aligned_cols=136  Identities=15%  Similarity=0.164  Sum_probs=97.4

Q ss_pred             eeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCC---------------CHH-----HHHHHHHHHHHHHHcCCCcee
Q 002331          678 LVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDF---------------SGA-----ALLEFKREVKIMRRLRHPNVV  736 (935)
Q Consensus       678 y~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~---------------~~~-----~~~~f~~Ei~iL~~L~HPNIV  736 (935)
                      |.+++.||.|+||.||+|.. +|+.||||+++....               ...     ......+|...|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            89999999999999999976 789999998753211               000     011123455556655433321


Q ss_pred             --eeecccccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeecCCC-
Q 002331          737 --LFMGAVTRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNW-  813 (935)
Q Consensus       737 --kl~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd~~g-  813 (935)
                        ..++.    ...+|||||++|+.|.++...       .....++.||+.+|.+||++|  ||||||||.||||++++ 
T Consensus       177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             CCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEEEC
T ss_pred             CCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCCCC
Confidence              12211    124799999999888765432       123457889999999999999  99999999999998776 


Q ss_pred             ---------cEEEEeccccccc
Q 002331          814 ---------NVKVSDFGLSRLK  826 (935)
Q Consensus       814 ---------~VKL~DFGlA~~~  826 (935)
                               .+.|+||+.+...
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCEET
T ss_pred             cccccccccceEEEEeCCcccC
Confidence                     3899999987653


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27  E-value=6.9e-12  Score=131.01  Aligned_cols=141  Identities=16%  Similarity=0.037  Sum_probs=111.3

Q ss_pred             CCeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCceeeeecccccCCceEEEEee
Q 002331          676 EDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPNVVLFMGAVTRPPNLSIITEF  754 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPNIVkl~g~~~~~~~l~LVmEy  754 (935)
                      ..|.+...++.|+++.||++...++.+++|+.......  ....+.+|+.+++.+ .+..+.++++++.+.+..|+||||
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            46888888999999999999888899999987653211  122478899999998 467788899998888889999999


Q ss_pred             CCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 002331          755 LPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTST----------------------------------------  794 (935)
Q Consensus       755 ~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g----------------------------------------  794 (935)
                      ++|.+|.+.+..      ......++.+++.+|..||...                                        
T Consensus        92 i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (263)
T 3tm0_A           92 ADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK  165 (263)
T ss_dssp             CSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred             cCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence            999999876421      1123367789999999999810                                        


Q ss_pred             -----------------CCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          795 -----------------PTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       795 -----------------~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                                       +.++|+|++|.|||++.++.+.|+||+.+.
T Consensus       166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                             239999999999999876566799998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.08  E-value=1.9e-10  Score=118.40  Aligned_cols=135  Identities=19%  Similarity=0.135  Sum_probs=99.1

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc--eeeeecccccCCceEEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN--VVLFMGAVTRPPNLSIIT  752 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN--IVkl~g~~~~~~~l~LVm  752 (935)
                      ..|.+....+.|..+.||++.. +|+.|+||+.....     ...+.+|+.+++.+.+.+  +.++++++...+..++||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence            4556655445666799999976 36779999865442     134678999999885434  556888888878899999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTST--------------------------------------  794 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g--------------------------------------  794 (935)
                      ||++|.+|.  ...    .+.   ..++.+++..|..||...                                      
T Consensus        95 e~i~G~~l~--~~~----~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           95 GEVPGQDLL--SSH----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             ECCSSEETT--TSC----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             EecCCcccC--cCc----CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            999998874  221    122   246677888888888743                                      


Q ss_pred             ------------------CCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          795 ------------------PTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       795 ------------------~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                                        ..++|+|++|.|||++.++.++|+|||.+.
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                              129999999999999877667799999875


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05  E-value=3.9e-10  Score=123.82  Aligned_cols=142  Identities=19%  Similarity=0.206  Sum_probs=106.9

Q ss_pred             EEEEeeecCcEEEEEEEECCceEEEEEee--ccCCCHHHHHHHHHHHHHHHHcC--CCceeeeecccccC---CceEEEE
Q 002331          680 LGERIGLGSYGEVYHADWNGTEVAVKKFL--DQDFSGAALLEFKREVKIMRRLR--HPNVVLFMGAVTRP---PNLSIIT  752 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~~g~~VAVK~i~--~~~~~~~~~~~f~~Ei~iL~~L~--HPNIVkl~g~~~~~---~~l~LVm  752 (935)
                      ..+.|+.|.++.||+++..+..+++|+..  .... ......+.+|+.+++.|.  +..+.+++.++.+.   +..|+||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            45779999999999998888889999765  3221 112346788999999996  45578888887766   4589999


Q ss_pred             eeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 002331          753 EFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTS---------------------------------------  793 (935)
Q Consensus       753 Ey~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~---------------------------------------  793 (935)
                      ||++|..+.+..   ...++......++.+++..|..||..                                       
T Consensus       121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (359)
T 3dxp_A          121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM  197 (359)
T ss_dssp             ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred             EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence            999987764321   12467888888999999999999983                                       


Q ss_pred             -----------------CCCEEeeCCCCCCeeecCCCc--EEEEecccccc
Q 002331          794 -----------------TPTIVHRDLKSPNLLVDKNWN--VKVSDFGLSRL  825 (935)
Q Consensus       794 -----------------g~~IIHrDLKPeNILLd~~g~--VKL~DFGlA~~  825 (935)
                                       ...++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                             135999999999999997653  69999998874


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87  E-value=2.1e-09  Score=115.39  Aligned_cols=185  Identities=19%  Similarity=0.184  Sum_probs=121.9

Q ss_pred             EEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHc-CCCc--eeeeecccccCC---ceEEEEeeC
Q 002331          682 ERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRL-RHPN--VVLFMGAVTRPP---NLSIITEFL  755 (935)
Q Consensus       682 e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L-~HPN--IVkl~g~~~~~~---~l~LVmEy~  755 (935)
                      +.++.|....||++.   ..++||+....    .....+.+|+.+|+.+ .+..  +.+++......+   ..|+||||+
T Consensus        26 ~~~~~G~~n~v~~v~---~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CEEEECSSEEEEEST---TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             EecCCCCcceEEEEC---CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            458999999999974   67889975422    3456788999999888 3332  344554443333   358999999


Q ss_pred             CCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 002331          756 PRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTST-----------------------------------------  794 (935)
Q Consensus       756 ~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g-----------------------------------------  794 (935)
                      +|..|.....   ..++......++.+++..|..||...                                         
T Consensus        99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  175 (304)
T 3sg8_A           99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD  175 (304)
T ss_dssp             CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence            9988865332   23667777788888888888888611                                         


Q ss_pred             ---------------CCEEeeCCCCCCeeecC--CCcEEEEeccccccccCCcccCCCCCCCCCccCcccccC-----CC
Q 002331          795 ---------------PTIVHRDLKSPNLLVDK--NWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRN-----EP  852 (935)
Q Consensus       795 ---------------~~IIHrDLKPeNILLd~--~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g-----~~  852 (935)
                                     +.++|+|++|.|||++.  .+.+.|+||+.+..-... ...........-..|+.+..     ..
T Consensus       176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y~~  254 (304)
T 3sg8_A          176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHYKH  254 (304)
T ss_dssp             HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHcCC
Confidence                           24899999999999998  556889999988653221 10000000000023332211     11


Q ss_pred             C---------CchhHHHHHHHHHHHHHcCCCCCC
Q 002331          853 S---------NEKCDVYSFGVILWELATLKLPWI  877 (935)
Q Consensus       853 ~---------s~ksDIWSLG~ILyELLTG~~PF~  877 (935)
                      .         ....+.|+++.++|.+.+|..+|.
T Consensus       255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            1         123689999999999999987753


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.72  E-value=5.7e-08  Score=105.41  Aligned_cols=179  Identities=16%  Similarity=0.107  Sum_probs=117.3

Q ss_pred             EEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCC----CceeeeecccccCCceEEEEeeC
Q 002331          680 LGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRH----PNVVLFMGAVTRPPNLSIITEFL  755 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~H----PNIVkl~g~~~~~~~l~LVmEy~  755 (935)
                      -.+.|+.|....||++   +..+++|+...    ......+.+|..+|+.+.+    ..+.++++.    +..++||||+
T Consensus        41 ~v~~l~~G~~n~vy~v---g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i  109 (320)
T 3r70_A           41 ELRYLSSGDDSDTFLC---NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI  109 (320)
T ss_dssp             CEEEEEECSSEEEEEE---TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred             EEEeCCCCCCceEEEE---CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence            3567899999999998   77899997532    2234458899999998865    123445444    4678999999


Q ss_pred             CCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 002331          756 PRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTP----------------------------------------  795 (935)
Q Consensus       756 ~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~----------------------------------------  795 (935)
                      +|..+.....   ..++......++.+++..|..||....                                        
T Consensus       110 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (320)
T 3r70_A          110 KGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML  186 (320)
T ss_dssp             CCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred             CCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence            9988864321   235666777788888888888885432                                        


Q ss_pred             ---------------------CEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCCCCCCCCCccCccccc---CC
Q 002331          796 ---------------------TIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLR---NE  851 (935)
Q Consensus       796 ---------------------~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~---g~  851 (935)
                                           .++|+|++|.|||++.++.+.|+||+.+..-..................||...   ..
T Consensus       187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~l~~  266 (320)
T 3r70_A          187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKY  266 (320)
T ss_dssp             HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHHHHHHHHHH
Confidence                                 259999999999999866679999999865332111100011111123444332   11


Q ss_pred             C-------CCchhHHHHHHHHHHHHHcC
Q 002331          852 P-------SNEKCDVYSFGVILWELATL  872 (935)
Q Consensus       852 ~-------~s~ksDIWSLG~ILyELLTG  872 (935)
                      .       ...+.++|..-..+++|+.|
T Consensus       267 Y~~~~~~~~~~~~~~~~~~~~l~~l~~~  294 (320)
T 3r70_A          267 YQHKAPEVAERKAELNDVYWSIDQIIYG  294 (320)
T ss_dssp             TTCSCHHHHHHHHHHHHHTHHHHHHHSS
T ss_pred             HhccCcHHHHHHHHHHHHHhHHHHHHHH
Confidence            1       12456777655557888876


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.38  E-value=3e-06  Score=91.63  Aligned_cols=135  Identities=18%  Similarity=0.150  Sum_probs=94.5

Q ss_pred             EEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCC---ceeeeecccc-cCCceEEEEeeCC
Q 002331          681 GERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHP---NVVLFMGAVT-RPPNLSIITEFLP  756 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HP---NIVkl~g~~~-~~~~l~LVmEy~~  756 (935)
                      .+.++.|....||+.   +..++||+-.    .......+.+|+.+|+.|.+.   .+.+++.++. ..+..++||||++
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            355899999999998   6789999742    223456788999999999642   2455555553 4456789999999


Q ss_pred             CCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 002331          757 RGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTST------------------------------------------  794 (935)
Q Consensus       757 gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g------------------------------------------  794 (935)
                      |..|....-.   .++......++.++...|..||...                                          
T Consensus        97 G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           97 GQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             SEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             CeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            9888763211   2344455555555655555555422                                          


Q ss_pred             ----------------CCEEeeCCCCCCeeecC---CCcE-EEEecccccc
Q 002331          795 ----------------PTIVHRDLKSPNLLVDK---NWNV-KVSDFGLSRL  825 (935)
Q Consensus       795 ----------------~~IIHrDLKPeNILLd~---~g~V-KL~DFGlA~~  825 (935)
                                      +.++|+|++|.|||++.   ++.+ .|+||+.+..
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                            23799999999999987   4554 8999998764


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36  E-value=1.5e-06  Score=90.87  Aligned_cols=132  Identities=18%  Similarity=0.219  Sum_probs=94.2

Q ss_pred             EeeecCcE-EEEEEEE--CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeecccccCCceEEEEeeCCCC
Q 002331          683 RIGLGSYG-EVYHADW--NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTRPPNLSIITEFLPRG  758 (935)
Q Consensus       683 ~LG~G~fG-~Vyka~~--~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~~~~l~LVmEy~~gG  758 (935)
                      .+..|..| .||+...  .+..++||+-...     ....+.+|..+|+.|. +--+.++++++.+.+..++|||+++|.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            34555554 6898764  4567899975432     3456788999999884 333667888888888899999999998


Q ss_pred             CHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 002331          759 SLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTP-------------------------------------------  795 (935)
Q Consensus       759 sL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~-------------------------------------------  795 (935)
                      ++.+.....     ......++.++...|..||....                                           
T Consensus       106 ~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          106 TAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             EHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             cccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            887765321     11223455666667777775320                                           


Q ss_pred             -------------CEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          796 -------------TIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       796 -------------~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                                   .++|+|+.+.|||++.++.+-|+||+.+.
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                         17999999999999987777899999775


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.35  E-value=1.7e-06  Score=96.24  Aligned_cols=76  Identities=9%  Similarity=0.012  Sum_probs=57.2

Q ss_pred             eeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc--eeeeecccccC-CceEEEEee
Q 002331          678 LVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN--VVLFMGAVTRP-PNLSIITEF  754 (935)
Q Consensus       678 y~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN--IVkl~g~~~~~-~~l~LVmEy  754 (935)
                      ..-.+.|+.|....+|+.+..+..++||+....       ..+.+|+.+++.|....  +.+++.++... +..|+||||
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~  115 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR  115 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEETTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred             CceEEECCCCCcceEEEEEECCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence            345677999999999999888999999976432       14778999999885433  45666665544 568999999


Q ss_pred             CCCCCH
Q 002331          755 LPRGSL  760 (935)
Q Consensus       755 ~~gGsL  760 (935)
                      ++|..+
T Consensus       116 l~G~~l  121 (362)
T 3ovc_A          116 AQGVTL  121 (362)
T ss_dssp             CCSEET
T ss_pred             cCCCCc
Confidence            987654


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18  E-value=2e-06  Score=93.86  Aligned_cols=84  Identities=6%  Similarity=-0.031  Sum_probs=55.1

Q ss_pred             eeEEEEe-eecCcEEEEEEEEC--------CceEEEEEeeccCC-CHHHHHHHHHHHHHHHHcC-C--Cceeeeeccccc
Q 002331          678 LVLGERI-GLGSYGEVYHADWN--------GTEVAVKKFLDQDF-SGAALLEFKREVKIMRRLR-H--PNVVLFMGAVTR  744 (935)
Q Consensus       678 y~I~e~L-G~G~fG~Vyka~~~--------g~~VAVK~i~~~~~-~~~~~~~f~~Ei~iL~~L~-H--PNIVkl~g~~~~  744 (935)
                      ....+.| +.|....+|+....        +..+++|+...... .......+.+|+.+|+.|. +  -.+.+++.++.+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3445778 88999999998764        67899997643220 0000124567888888773 2  346677777655


Q ss_pred             C---CceEEEEeeCCCCCHH
Q 002331          745 P---PNLSIITEFLPRGSLF  761 (935)
Q Consensus       745 ~---~~l~LVmEy~~gGsL~  761 (935)
                      .   +..++||||++|..+.
T Consensus       102 ~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          102 GDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             STTTSSCEEEEECCCCBCCC
T ss_pred             CCccCCceEEEEecCCCChh
Confidence            4   3568999999886543


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.06  E-value=1.2e-05  Score=86.72  Aligned_cols=76  Identities=18%  Similarity=0.140  Sum_probs=57.3

Q ss_pred             eEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCC---ceeeeecccccCCceEEEEee
Q 002331          679 VLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHP---NVVLFMGAVTRPPNLSIITEF  754 (935)
Q Consensus       679 ~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HP---NIVkl~g~~~~~~~l~LVmEy  754 (935)
                      .-.+.|+.|.++.||+++. +|+.|+||+......  .....+..|+..|+.|.+.   .+.+++++.    ..++||||
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~   91 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence            4467899999999999986 578899998643321  1124678999999999764   577777753    36899999


Q ss_pred             CCCCCH
Q 002331          755 LPRGSL  760 (935)
Q Consensus       755 ~~gGsL  760 (935)
                      ++++.+
T Consensus        92 l~g~~~   97 (288)
T 3d1u_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             cccCCC
Confidence            998864


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.05  E-value=2.5e-05  Score=83.69  Aligned_cols=139  Identities=15%  Similarity=0.083  Sum_probs=79.8

Q ss_pred             EEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC--CCceeeeecc------cccCCceEEEE
Q 002331          681 GERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR--HPNVVLFMGA------VTRPPNLSIIT  752 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~--HPNIVkl~g~------~~~~~~l~LVm  752 (935)
                      .+.|+.|..+.||++...+..+++|+....   .   ..+..|+.+++.|.  .-.+.+++..      ....+..+++|
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSGAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EEECC----CEEEEEEETTEEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCCCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence            456777788999999887777999987652   1   22334555555552  1123333331      12456688999


Q ss_pred             eeCCCCCHH-----------HHH---cC--CCC--C---------CCHHH------------------------------
Q 002331          753 EFLPRGSLF-----------RIL---HR--PHC--Q---------VDEKR------------------------------  775 (935)
Q Consensus       753 Ey~~gGsL~-----------dlL---~~--~~~--~---------lse~~------------------------------  775 (935)
                      ||++|..+.           +.+   +.  ...  +         ..+..                              
T Consensus       111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  190 (346)
T 2q83_A          111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ  190 (346)
T ss_dssp             ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred             EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence            999986431           111   11  000  0         11111                              


Q ss_pred             -HHHHHHHHHHHHHHHHh-----------cCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          776 -RIKMALDVARGMNCLHT-----------STPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       776 -il~Ia~QIa~AL~yLHs-----------~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                       ...+..++..++.+|+.           ....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             01111223445666653           223599999999999998888999999998753


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88  E-value=3e-05  Score=86.17  Aligned_cols=77  Identities=17%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             EEEEeeecCcEEEEEEEE--CCceEEEEEeeccCC--CH---HHHHHHHHHHHHHHHcC-C-Cc-eeeeecccccCCceE
Q 002331          680 LGERIGLGSYGEVYHADW--NGTEVAVKKFLDQDF--SG---AALLEFKREVKIMRRLR-H-PN-VVLFMGAVTRPPNLS  749 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~--~g~~VAVK~i~~~~~--~~---~~~~~f~~Ei~iL~~L~-H-PN-IVkl~g~~~~~~~l~  749 (935)
                      -.+.||.|.++.||+++.  .++.|+||.......  ..   .....+..|..+|+.+. + +. +.+++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            356799999999999954  567899997653211  00   11234567888888873 2 33 3455543  344568


Q ss_pred             EEEeeCCCC
Q 002331          750 IITEFLPRG  758 (935)
Q Consensus       750 LVmEy~~gG  758 (935)
                      +||||+++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999764


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.67  E-value=0.00015  Score=79.35  Aligned_cols=76  Identities=20%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             EEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC---CCceeeeecccccCCceEEEEeeCC
Q 002331          680 LGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR---HPNVVLFMGAVTRPPNLSIITEFLP  756 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~---HPNIVkl~g~~~~~~~l~LVmEy~~  756 (935)
                      -.+.|+.|.+..+|+....+..++||+....     ....+..|...|+.|.   ...+.+++.+....+..++||||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            4577999999999999888889999986543     2456788999998883   3567788888877788999999999


Q ss_pred             CCCH
Q 002331          757 RGSL  760 (935)
Q Consensus       757 gGsL  760 (935)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8754


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53  E-value=0.00019  Score=80.63  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=45.8

Q ss_pred             CCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCCCCCC--CCCccCcccccCC---CCCchhHHHHHHHHHHHH
Q 002331          795 PTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTAG--TPEWMAPEVLRNE---PSNEKCDVYSFGVILWEL  869 (935)
Q Consensus       795 ~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s~~G--T~~Y~APEvl~g~---~~s~ksDIWSLG~ILyEL  869 (935)
                      +.++|+|++|.|||++.++ ++|+||+.+..-...... .....  ...|++|+.....   ......++..+...+|+.
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            3599999999999998876 999999988743211000 00000  1235666554321   112234555777777777


Q ss_pred             HcC
Q 002331          870 ATL  872 (935)
Q Consensus       870 LTG  872 (935)
                      +.+
T Consensus       310 y~~  312 (420)
T 2pyw_A          310 FNK  312 (420)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764


No 270
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.31  E-value=0.00088  Score=70.23  Aligned_cols=140  Identities=16%  Similarity=0.141  Sum_probs=95.0

Q ss_pred             CCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCEEeeCCCCCCeeecCCCcEEEEeccccccccCCcccCCC
Q 002331          757 RGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLH-TSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKS  835 (935)
Q Consensus       757 gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLH-s~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~~~~~~~~~~s  835 (935)
                      ..+|.++|...+.+++++++|.++.|.+.+|.-+- ...  -..+=+.|..|+|..+|.|-+.+ +.+.           
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ--PRHRVRSAAQIRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc--CCceecCCcceEEecCCceeccc-cccc-----------
Confidence            44899999888889999999999999999987662 111  11233457899999999998763 1110           


Q ss_pred             CCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCcCcHHHHHHHHHHHhh
Q 002331          836 TAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWIGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQT  915 (935)
Q Consensus       836 ~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~~~~~~eil~~I~~~~~r~~ip~~ls~~L~dLI~qCL~~  915 (935)
                       .....+.+||.+. ...+.+.=|||||++||.-+--.                   .+...+..+++.|.+||..|...
T Consensus        98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg-------------------L~e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A           98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG-------------------LKENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTT-------------------CCTTEEECCCHHHHHHHHHHTTC
T ss_pred             -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC-------------------CCcccchhhCHHHHHHHHHHHhc
Confidence             1233567888763 34568899999999999988522                   22233456899999999999866


Q ss_pred             C-----------------C-----CCcCCCcCHHHHHh
Q 002331          916 G-----------------W-----SSLHIRTSQAQLSH  931 (935)
Q Consensus       916 D-----------------~-----ssP~kRPSa~EILq  931 (935)
                      .                 |     ..+..|+++++|++
T Consensus       157 ~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          157 VEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             CC--------------------CCSCCCCCCSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCcCCHHHHHH
Confidence            2                 1     12468899999986


No 271
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.26  E-value=0.00086  Score=71.78  Aligned_cols=145  Identities=12%  Similarity=0.085  Sum_probs=81.4

Q ss_pred             CeeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc--eeeeeccc------ccCCce
Q 002331          677 DLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN--VVLFMGAV------TRPPNL  748 (935)
Q Consensus       677 dy~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN--IVkl~g~~------~~~~~l  748 (935)
                      +..-.+.|+.|....+|++...+..+++|+.....    ....+..|+.+++.|...+  +.+++...      ...+..
T Consensus        23 ~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~   98 (322)
T 2ppq_A           23 SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRP   98 (322)
T ss_dssp             CEEEEEEECC---EEEEEEEESSCCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEE
T ss_pred             cceEeeccCCCcccceEEEEeCCccEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEE
Confidence            34456778889999999998776689999876521    1224456777777663212  23333221      123457


Q ss_pred             EEEEeeCCCCCHH-----------HH---HcC--C--CCC----CC---HHHHHH------------HHHHHHHHHHHHH
Q 002331          749 SIITEFLPRGSLF-----------RI---LHR--P--HCQ----VD---EKRRIK------------MALDVARGMNCLH  791 (935)
Q Consensus       749 ~LVmEy~~gGsL~-----------dl---L~~--~--~~~----ls---e~~il~------------Ia~QIa~AL~yLH  791 (935)
                      +++|+|++|..+.           +.   ++.  .  ...    ..   +...+.            +...+...+.+|+
T Consensus        99 ~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~  178 (322)
T 2ppq_A           99 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA  178 (322)
T ss_dssp             EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence            8999999875431           11   111  0  000    11   111000            0011344555555


Q ss_pred             hc-----CCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          792 TS-----TPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       792 s~-----g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      ..     ...++|+|+++.|||++.++.+.|+||+.+..
T Consensus       179 ~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          179 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            32     12499999999999998876668999998764


No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.21  E-value=0.00077  Score=72.87  Aligned_cols=137  Identities=14%  Similarity=0.100  Sum_probs=70.4

Q ss_pred             EEeeecCcEE-EEEEEEC-CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-C-CceeeeecccccCCceEEEEeeCCC
Q 002331          682 ERIGLGSYGE-VYHADWN-GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-H-PNVVLFMGAVTRPPNLSIITEFLPR  757 (935)
Q Consensus       682 e~LG~G~fG~-Vyka~~~-g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-H-PNIVkl~g~~~~~~~l~LVmEy~~g  757 (935)
                      +.|+.|.... +|+.... +..+++|.......     ..+..|+.+++.|. + -.+.+++.+....  -+++||++.+
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~   96 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGD   96 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCS
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCC
Confidence            3465555544 6677764 77787776433210     22345667776663 2 2344566543332  2789999977


Q ss_pred             CCHHHHHcC---------------------C----CCCCCHHHHH-------HHH-------------HHHHHHHHHHH-
Q 002331          758 GSLFRILHR---------------------P----HCQVDEKRRI-------KMA-------------LDVARGMNCLH-  791 (935)
Q Consensus       758 GsL~dlL~~---------------------~----~~~lse~~il-------~Ia-------------~QIa~AL~yLH-  791 (935)
                      ..+.+++..                     .    ...++.....       .+.             ..+...+..|. 
T Consensus        97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~  176 (333)
T 3csv_A           97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS  176 (333)
T ss_dssp             CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence            666543321                     0    0112221110       000             01111222221 


Q ss_pred             ---hcCCCEEeeCCCCCCeeecCC----CcEEEEecccccc
Q 002331          792 ---TSTPTIVHRDLKSPNLLVDKN----WNVKVSDFGLSRL  825 (935)
Q Consensus       792 ---s~g~~IIHrDLKPeNILLd~~----g~VKL~DFGlA~~  825 (935)
                         .....++|||+.+.|||++.+    +.+.|+||+.+..
T Consensus       177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence               112359999999999999874    6899999998864


No 273
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.19  E-value=0.00071  Score=72.32  Aligned_cols=135  Identities=15%  Similarity=0.098  Sum_probs=74.2

Q ss_pred             EEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCce-eeeecccccCCceEEEEeeC-CCC
Q 002331          681 GERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNV-VLFMGAVTRPPNLSIITEFL-PRG  758 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNI-Vkl~g~~~~~~~l~LVmEy~-~gG  758 (935)
                      .+.|+.|....+|++    ..+++|+.....   .......+|+.+++.+...++ .++++.+.  +.-++|+||+ ++.
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~   93 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQ   93 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCE
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCc
Confidence            577999999999999    678889765421   111123467777777632222 45555433  3346899999 654


Q ss_pred             CHHH---------------H---HcCCCCC----CCH-HHHHHHHH--------------HHHHHHH----HHH--hcCC
Q 002331          759 SLFR---------------I---LHRPHCQ----VDE-KRRIKMAL--------------DVARGMN----CLH--TSTP  795 (935)
Q Consensus       759 sL~d---------------l---L~~~~~~----lse-~~il~Ia~--------------QIa~AL~----yLH--s~g~  795 (935)
                      .|..               .   ++.....    ++. ..+..+..              .+...+.    .|.  ....
T Consensus        94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~  173 (301)
T 3dxq_A           94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL  173 (301)
T ss_dssp             ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence            4321               0   1111111    111 11111111              0111111    111  1122


Q ss_pred             CEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          796 TIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       796 ~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .++|+|+.+.||| ..++.+.|+||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            4899999999999 5667789999998764


No 274
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.15  E-value=0.0016  Score=69.05  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=54.4

Q ss_pred             CCeeEEEEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-C--CceeeeecccccCCceEEE
Q 002331          676 EDLVLGERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-H--PNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-H--PNIVkl~g~~~~~~~l~LV  751 (935)
                      .++.-.+.+|.|..+.||+.+. +|+.|+||+.......  ....|..|+..|+.|. .  --+.+++++.    .-++|
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv   88 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA   88 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc--hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence            4556678899999999999987 6889999976543221  1234678999998883 2  2244555542    24799


Q ss_pred             EeeCCCCC
Q 002331          752 TEFLPRGS  759 (935)
Q Consensus       752 mEy~~gGs  759 (935)
                      |||++++.
T Consensus        89 ~e~l~~~~   96 (288)
T 3f7w_A           89 MEWVDERP   96 (288)
T ss_dssp             EECCCCCC
T ss_pred             EEeecccC
Confidence            99998664


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.89  E-value=0.002  Score=73.18  Aligned_cols=70  Identities=14%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             EEEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc-eeeeecccccCCceEE
Q 002331          681 GERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN-VVLFMGAVTRPPNLSI  750 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN-IVkl~g~~~~~~~l~L  750 (935)
                      .+.|+.|-...||++...         +..|++|+..... .   ...+.+|..+++.|...+ ..++++.+.+    .+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~  149 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR  149 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence            466888999999999864         4689999874321 1   123447888888884223 3566766543    38


Q ss_pred             EEeeCCCC
Q 002331          751 ITEFLPRG  758 (935)
Q Consensus       751 VmEy~~gG  758 (935)
                      ||||++|.
T Consensus       150 v~e~l~G~  157 (429)
T 1nw1_A          150 LEEYIPSR  157 (429)
T ss_dssp             EECCCCEE
T ss_pred             EEEEeCCc
Confidence            99999863


No 276
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.75  E-value=0.0067  Score=66.39  Aligned_cols=30  Identities=23%  Similarity=0.426  Sum_probs=27.2

Q ss_pred             CEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          796 TIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       796 ~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                      .++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            599999999999999888899999987764


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.60  E-value=0.0059  Score=70.23  Aligned_cols=73  Identities=18%  Similarity=0.100  Sum_probs=47.4

Q ss_pred             EEEeeecCcEEEEEEEECC--ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCce-eeeecccccCCceEEEEeeCCC
Q 002331          681 GERIGLGSYGEVYHADWNG--TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNV-VLFMGAVTRPPNLSIITEFLPR  757 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~g--~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNI-Vkl~g~~~~~~~l~LVmEy~~g  757 (935)
                      .+.|+.|-...+|++...+  ..|++|+.......   .....+|..+++.|...+| .++++.+..    .+||||++|
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~---~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G  185 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE---IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG  185 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS---CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh---hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence            4568889999999998866  78999986432100   1112578899998854444 567776632    359999986


Q ss_pred             CCH
Q 002331          758 GSL  760 (935)
Q Consensus       758 GsL  760 (935)
                      ..|
T Consensus       186 ~~l  188 (458)
T 2qg7_A          186 YAL  188 (458)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            443


No 278
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.58  E-value=0.0043  Score=69.69  Aligned_cols=137  Identities=13%  Similarity=0.160  Sum_probs=80.2

Q ss_pred             EEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeecccccCCceEEE
Q 002331          682 ERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTRPPNLSII  751 (935)
Q Consensus       682 e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~~~~l~LV  751 (935)
                      +.|..|-...+|++...         ++.|++|+.... .  .....+.+|..+++.|. +.-..++++.+.+    .+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v  128 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L--QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL  128 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence            45777888889999763         368889875321 1  12345568999998883 3333566766654    299


Q ss_pred             EeeCCCCCHH--------------HHH---cCC----CCCCC--HHHHHHHHHHHHH-------------------HHHH
Q 002331          752 TEFLPRGSLF--------------RIL---HRP----HCQVD--EKRRIKMALDVAR-------------------GMNC  789 (935)
Q Consensus       752 mEy~~gGsL~--------------dlL---~~~----~~~ls--e~~il~Ia~QIa~-------------------AL~y  789 (935)
                      |||++|..|.              +.|   +..    .....  +.++.++..++..                   .+..
T Consensus       129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  208 (379)
T 3feg_A          129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN  208 (379)
T ss_dssp             EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred             EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence            9999875442              111   121    11122  3444445443321                   2333


Q ss_pred             HH----hcC--CCEEeeCCCCCCeeecCC----CcEEEEecccccc
Q 002331          790 LH----TST--PTIVHRDLKSPNLLVDKN----WNVKVSDFGLSRL  825 (935)
Q Consensus       790 LH----s~g--~~IIHrDLKPeNILLd~~----g~VKL~DFGlA~~  825 (935)
                      |.    ..+  ..++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            32    222  259999999999999876    7899999998764


No 279
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.56  E-value=0.015  Score=62.29  Aligned_cols=138  Identities=13%  Similarity=0.085  Sum_probs=77.7

Q ss_pred             EEeeecCcEEEEEEEE-CCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCC--Cceeeeecc-----cccCCceEEEEe
Q 002331          682 ERIGLGSYGEVYHADW-NGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRH--PNVVLFMGA-----VTRPPNLSIITE  753 (935)
Q Consensus       682 e~LG~G~fG~Vyka~~-~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~H--PNIVkl~g~-----~~~~~~l~LVmE  753 (935)
                      +.|+ |....||++.. +|+.+++|+.......   ...+..|..+++.|..  -.+++++..     ....+..+++|+
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~  107 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  107 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence            3466 88889999876 4568999988644332   2345667788777732  124444443     112345678999


Q ss_pred             eCCCCCHH-----------HHH---c----CC----CCCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 002331          754 FLPRGSLF-----------RIL---H----RP----HCQVDEKRR----IKM---------------ALDVARGMNCLHT  792 (935)
Q Consensus       754 y~~gGsL~-----------dlL---~----~~----~~~lse~~i----l~I---------------a~QIa~AL~yLHs  792 (935)
                      |++|..+.           +.+   +    ..    ....+....    ..+               ...+-..+..+..
T Consensus       108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~  187 (328)
T 1zyl_A          108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA  187 (328)
T ss_dssp             CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            99875321           111   1    00    011221111    001               0011112223322


Q ss_pred             -----cCCCEEeeCCCCCCeeecCCCcEEEEecccccc
Q 002331          793 -----STPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRL  825 (935)
Q Consensus       793 -----~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~~  825 (935)
                           ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                 223489999999999999 4 899999988754


No 280
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55  E-value=0.0029  Score=69.47  Aligned_cols=72  Identities=13%  Similarity=0.156  Sum_probs=42.8

Q ss_pred             EEEeeecCcEEEEEEEECC----------ceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCc-eeeeecccccCCceE
Q 002331          681 GERIGLGSYGEVYHADWNG----------TEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPN-VVLFMGAVTRPPNLS  749 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~g----------~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPN-IVkl~g~~~~~~~l~  749 (935)
                      .+.|+.|....+|++...+          ..|++|+.....   ........|..+++.|...+ ..++++.+.    -+
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~  110 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GG  110 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEecC----Cc
Confidence            4568888889999998754          678888764321   11112357888888774223 346665442    36


Q ss_pred             EEEeeCCCCC
Q 002331          750 IITEFLPRGS  759 (935)
Q Consensus       750 LVmEy~~gGs  759 (935)
                      +||||++|..
T Consensus       111 ~v~e~i~G~~  120 (369)
T 3c5i_A          111 RIEEWLYGDP  120 (369)
T ss_dssp             EEEECCCSEE
T ss_pred             EEEEEecCCc
Confidence            8999998753


No 281
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=96.40  E-value=0.0038  Score=68.00  Aligned_cols=101  Identities=15%  Similarity=0.099  Sum_probs=67.1

Q ss_pred             HHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCCChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchhhHHHHH
Q 002331          196 LVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVKDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRHRALLFK  275 (935)
Q Consensus       196 L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rhRalLfK  275 (935)
                      |.++|..+..+  .....+.++.|...|.+.+. ...........   ...-|+            -+.|+|++-|.||.
T Consensus       128 i~~~A~~~~~~--~~~~~~~~~ai~~~v~~~~~-Y~~~~~~~~~~---a~~~l~------------~~~G~C~d~A~l~v  189 (293)
T 3isr_A          128 LQKLAYKEFGK--IENVYSKVLAITDWIYNNVE-YISGSTNSQTS---AFDTIT------------ERAGVCRDFAHLGI  189 (293)
T ss_dssp             SHHHHHHHHTT--CCSHHHHHHHHHHHHHHHSE-ECTTSCCTTCC---HHHHHH------------HCEECHHHHHHHHH
T ss_pred             HHHHHHHHhcc--CCCHHHHHHHHHHHHHhhcE-EeccCCCCCCC---HHHhhc------------CCcEehHHHHHHHH
Confidence            55667776655  34556788999999988654 21111100001   111222            35899999999999


Q ss_pred             HhhhccCCCeeeecccCCCC--CCCCceEEEEecCcceeeee
Q 002331          276 VLADSIRLPCRLVKGSHYTG--VEDDAVNIIKLEEEREFLVD  315 (935)
Q Consensus       276 vLaD~i~l~c~lv~G~~~~g--~~~~a~~~v~~~~~~~~ivD  315 (935)
                      .||-.+|||||+|.|.....  .+.+||++|.+.+ .=+.+|
T Consensus       190 al~Ra~GIPAR~VsGy~~~~~~~~~HAW~Evyl~g-gWv~~D  230 (293)
T 3isr_A          190 ALCRALSIPARYFTGYAFKLNPPDFHACFEAYIGG-NWIIFD  230 (293)
T ss_dssp             HHHHHTTCCEEEEEEEETTCSSCCEEEEEEEEETT-EEEEEC
T ss_pred             HHHHHCCCCEEEEEEECCCCCCCCeEEEEEEEECC-cEEEEE
Confidence            99999999999999976432  3448999999965 444444


No 282
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.80  E-value=0.029  Score=63.55  Aligned_cols=145  Identities=14%  Similarity=0.135  Sum_probs=83.0

Q ss_pred             CCeeEEEEeeecCcEEEEEEEEC---------CceEEEEEeeccCC------------CHH----HHHHHHHHHHHHHHc
Q 002331          676 EDLVLGERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDF------------SGA----ALLEFKREVKIMRRL  730 (935)
Q Consensus       676 edy~I~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~------------~~~----~~~~f~~Ei~iL~~L  730 (935)
                      +++.+ +.|..|-...+|++...         .+.|.+++.-....            ...    ..+.+..|..+++.+
T Consensus        53 ~~i~v-~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L  131 (401)
T 3f2s_A           53 DEFHI-SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAIL  131 (401)
T ss_dssp             GGCEE-EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHH
T ss_pred             hheEE-EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHH
Confidence            34444 45666888899999764         25788887643210            000    011233588888888


Q ss_pred             C-CCceeeeecccccCCceEEEEeeCCCCCHH--------------HHH---cCCC----CCCC--HHHHHHHHHHHH--
Q 002331          731 R-HPNVVLFMGAVTRPPNLSIITEFLPRGSLF--------------RIL---HRPH----CQVD--EKRRIKMALDVA--  784 (935)
Q Consensus       731 ~-HPNIVkl~g~~~~~~~l~LVmEy~~gGsL~--------------dlL---~~~~----~~ls--e~~il~Ia~QIa--  784 (935)
                      . +--..++++++..+    +|+||++|..|.              ..+   +...    ..+.  +..+.++..++.  
T Consensus       132 ~~~Gi~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~  207 (401)
T 3f2s_A          132 AERSLGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRI  207 (401)
T ss_dssp             HHTTSSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHC
T ss_pred             HhcCCCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhc
Confidence            3 44455777776542    899999865431              111   1111    1122  223333333221  


Q ss_pred             --------------------HHH----HHHHhcC--CCEEeeCCCCCCeeecCC------CcEEEEecccccc
Q 002331          785 --------------------RGM----NCLHTST--PTIVHRDLKSPNLLVDKN------WNVKVSDFGLSRL  825 (935)
Q Consensus       785 --------------------~AL----~yLHs~g--~~IIHrDLKPeNILLd~~------g~VKL~DFGlA~~  825 (935)
                                          .-+    .+|...+  ..++|+|+.+.|||++.+      +.+.|+||..+..
T Consensus       208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                                112    2233322  248999999999999876      7899999988763


No 283
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=95.10  E-value=0.065  Score=62.35  Aligned_cols=106  Identities=11%  Similarity=0.055  Sum_probs=66.1

Q ss_pred             HHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCCChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchhhHHHHH
Q 002331          196 LVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVKDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRHRALLFK  275 (935)
Q Consensus       196 L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rhRalLfK  275 (935)
                      +.++|..+..+  ..+..+.++.|-.+|.+.+.=.....+..-..-.....-|+..            .|.|+-.|+||.
T Consensus       230 i~~~a~~l~~~--~~~~~ek~~~iy~~V~~~i~y~~~~~~~~g~~~~~a~~vl~~~------------~G~C~d~a~Ll~  295 (506)
T 3kd4_A          230 SKTFAQFLTDK--SGNEQEKVNIIRDHILNNLSTCPIPMAMTGYTVRDIDTVLRSA------------YGTPLEIAQLLN  295 (506)
T ss_dssp             HHHHHHHHHSS--CSSHHHHHHHHHHHHHHHCEECCCCGGGGTTCCCCHHHHHHHT------------EECHHHHHHHHH
T ss_pred             HHHHHHHHHhc--CCCHHHHHHHHHHHHHhccEecceecccCCCCCCCHHHHHHhC------------CcchHHHHHHHH
Confidence            44455555555  4455566777777777666311000000000000112233333            699999999999


Q ss_pred             HhhhccCCCeeeecccCC--------CCCCCCceEEEEecCcceeeeec
Q 002331          276 VLADSIRLPCRLVKGSHY--------TGVEDDAVNIIKLEEEREFLVDL  316 (935)
Q Consensus       276 vLaD~i~l~c~lv~G~~~--------~g~~~~a~~~v~~~~~~~~ivDl  316 (935)
                      .|+-..||||++|-+.-.        -...+++|..|.+ +|+.|++|-
T Consensus       296 AllRa~GIpA~~v~~~t~~~~~~~~~lp~~nh~i~~v~~-~g~~y~lDa  343 (506)
T 3kd4_A          296 VMLNAAGIPSEVLAVYPGHLDTDACGLAAIQTLAVKATV-DGKDQYLSA  343 (506)
T ss_dssp             HHHHHTTCCEEEEEEEETTSCGGGCCSTTCCEEEEEEEE-TTEEEEESS
T ss_pred             HHHHHCCCCcEEEEEEcCCCCCccCCCCCCCEEEEEEEE-CCEEEEEec
Confidence            999999999999987732        1123678988886 789999997


No 284
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=94.77  E-value=0.022  Score=61.99  Aligned_cols=49  Identities=16%  Similarity=0.138  Sum_probs=41.4

Q ss_pred             cccccchhhHHHHHHhhhccCCCeeeecccCCCCCCCCceEEEEecC-cceeeee
Q 002331          262 INIGLSRHRALLFKVLADSIRLPCRLVKGSHYTGVEDDAVNIIKLEE-EREFLVD  315 (935)
Q Consensus       262 i~~G~~rhRalLfKvLaD~i~l~c~lv~G~~~~g~~~~a~~~v~~~~-~~~~ivD  315 (935)
                      -+.|+|++-|.||-+||-.+|||||+|-|.     +++||++|.+.. ..=+-||
T Consensus       138 ~r~G~C~d~A~lf~al~Ra~GIpAR~V~Gy-----~~HaW~Evy~~g~~gWv~~D  187 (295)
T 2f4m_A          138 TRCGRCGEWANCFTLCCRALGFEARYVWDY-----TDHVWTEVYSPSQQRWLHCD  187 (295)
T ss_dssp             HCEESHHHHHHHHHHHHHHTTCCEEEEEET-----TTEEEEEEEETTTTEEEEEE
T ss_pred             cCCEeeHHHHHHHHHHHHHCCCCEEEEcCC-----CCEEEEEEEECCCCeEEEEe
Confidence            368999999999999999999999999997     578999999975 3333444


No 285
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.93  E-value=0.074  Score=60.61  Aligned_cols=72  Identities=13%  Similarity=0.130  Sum_probs=47.0

Q ss_pred             EEEeeecCcEEEEEEEEC---------CceEEEEEeeccCCCHHHHHHHHHHHHHHHHcC-CCceeeeecccccCCceEE
Q 002331          681 GERIGLGSYGEVYHADWN---------GTEVAVKKFLDQDFSGAALLEFKREVKIMRRLR-HPNVVLFMGAVTRPPNLSI  750 (935)
Q Consensus       681 ~e~LG~G~fG~Vyka~~~---------g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~-HPNIVkl~g~~~~~~~l~L  750 (935)
                      .+.|..|-...+|++...         +..|++|+.....   .......+|..+++.|. +.-..++++.+.    -++
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~  147 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGR  147 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence            456777888899999875         6789999854321   11112357888888773 322345555432    278


Q ss_pred             EEeeCCCCC
Q 002331          751 ITEFLPRGS  759 (935)
Q Consensus       751 VmEy~~gGs  759 (935)
                      ||||++|..
T Consensus       148 I~efI~G~~  156 (424)
T 3mes_A          148 IEEFIDGEP  156 (424)
T ss_dssp             EEECCCSEE
T ss_pred             EEEEeCCcc
Confidence            999998865


No 286
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.12  E-value=0.25  Score=55.25  Aligned_cols=29  Identities=24%  Similarity=0.425  Sum_probs=25.3

Q ss_pred             EEeeCCCCCCeee------cCCCcEEEEecccccc
Q 002331          797 IVHRDLKSPNLLV------DKNWNVKVSDFGLSRL  825 (935)
Q Consensus       797 IIHrDLKPeNILL------d~~g~VKL~DFGlA~~  825 (935)
                      ++|+|+.+.|||+      +++..++++||-.+..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6799999999999      4567899999998874


No 287
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=92.42  E-value=0.095  Score=57.79  Aligned_cols=48  Identities=23%  Similarity=0.166  Sum_probs=40.3

Q ss_pred             ccccchhhHHHHHHhhhccCCCeeeecccCCCCCCCCceEEEEecCccee-eee
Q 002331          263 NIGLSRHRALLFKVLADSIRLPCRLVKGSHYTGVEDDAVNIIKLEEEREF-LVD  315 (935)
Q Consensus       263 ~~G~~rhRalLfKvLaD~i~l~c~lv~G~~~~g~~~~a~~~v~~~~~~~~-ivD  315 (935)
                      +.|.|.|=|.||=.|+=.+|||||+|-|.     .+++|++|.+.....+ =||
T Consensus       180 r~G~C~e~A~lF~~llRalGi~aR~V~~~-----~~H~W~EV~~~~~~rWv~vD  228 (335)
T 1x3z_A          180 RKGRCGEWCNLFTLILKSFGLDVRYVWNR-----EDHVWCEYFSNFLNRWVHVD  228 (335)
T ss_dssp             CEECHHHHHHHHHHHHHTTTCCEEEEEET-----TTEEEEEEEETTTTEEEEEE
T ss_pred             CCcChHHHHHHHHHHHHHCCCCeEEEecC-----CCcEEEEEEECCCCCEEEEC
Confidence            47999999999999999999999999873     5889999998764333 345


No 288
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.17  E-value=2.3  Score=44.23  Aligned_cols=116  Identities=11%  Similarity=0.096  Sum_probs=77.3

Q ss_pred             CCCceeeeecccccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCEEeeCCCCCCeeec
Q 002331          731 RHPNVVLFMGAVTRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVD  810 (935)
Q Consensus       731 ~HPNIVkl~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~yLHs~g~~IIHrDLKPeNILLd  810 (935)
                      .||+++.. .+-.+++.+.|.++.-+.+.=+..++    ..+...+++++.+|+....+++.    =+|--|+|+||+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL~f~  113 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDELFFT  113 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGEEEC
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceEEEc
Confidence            58888866 45555666666666544332222233    36788999999999988765544    37889999999999


Q ss_pred             CCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002331          811 KNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWI  877 (935)
Q Consensus       811 ~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~  877 (935)
                      .++.+++.=-|+-..                 ++|.     ..+...=+-.+=|++..+++++..|.
T Consensus       114 ~~~~p~i~~RGik~~-----------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          114 RDGLPIAKTRGLQNV-----------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             TTSCEEESCCEETTT-----------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             CCCCEEEEEccCccC-----------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999999976664321                 1222     12222333457788889999888774


No 289
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.35  E-value=0.097  Score=60.13  Aligned_cols=60  Identities=13%  Similarity=0.090  Sum_probs=16.3

Q ss_pred             EEEEeeecCcEEEEEEEECC--ceEEE------EEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeeccc
Q 002331          680 LGERIGLGSYGEVYHADWNG--TEVAV------KKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGAV  742 (935)
Q Consensus       680 I~e~LG~G~fG~Vyka~~~g--~~VAV------K~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~~  742 (935)
                      +.+.||   ||.||++.+.+  .+|||      |..............+.+|..+++.++|||+++.+++.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            344566   99999998864  47888      76655555555566788899999999999999988764


No 290
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=71.95  E-value=2.1  Score=51.43  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=47.9

Q ss_pred             chHHHHHHHHHHHHhhc-CCCCC-------ChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchhhHHHHHHhhhccC
Q 002331          211 DVGILVQQLADLVNGHM-GGPVK-------DANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRHRALLFKVLADSIR  282 (935)
Q Consensus       211 ~~~~~~~~LA~lV~~~m-gg~~~-------~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rhRalLfKvLaD~i~  282 (935)
                      +...++..|+..|...- .|.+.       ..+..-..|.-....|++-+.+.+.|   ++.|.|+|=|-+|=.|+=.+|
T Consensus       211 dpv~v~r~lsa~vn~~~d~gvl~g~w~~~y~~g~~P~~~~gs~~il~~~~~~~~~P---V~~G~C~~fA~~~~~~lR~lG  287 (692)
T 1vjj_A          211 DPKYVGRVLSAMINSNDDNGVLAGNWSGTYTGGRDPRSWNGSVEILKNWKKSGLSP---VRYGQCWVFAGTLNTALRSLG  287 (692)
T ss_dssp             CHHHHHHHHHHHTBCTTTTCSEEECCSSCCTTSCCGGGCCBSHHHHHHHHHTTSCC---EEEECHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhhccCccceeecccccccCCCcCCcccCChHHHHHHHHHcCCCc---ccceeeHHHHHHHHHHHHhCC
Confidence            44556777777775431 11110       11112233432222333333334444   578999999999999999999


Q ss_pred             CCeeeeccc
Q 002331          283 LPCRLVKGS  291 (935)
Q Consensus       283 l~c~lv~G~  291 (935)
                      ||||+|.|.
T Consensus       288 IPaR~Vtgy  296 (692)
T 1vjj_A          288 IPSRVITNF  296 (692)
T ss_dssp             CCEEEEEEE
T ss_pred             CCeeEEccc
Confidence            999999998


No 291
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.26  E-value=4.3  Score=42.33  Aligned_cols=115  Identities=10%  Similarity=0.096  Sum_probs=76.0

Q ss_pred             CCCceeeeecccccCCceEEEEeeCCCCCHHHHHcCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCEEeeCCCCCCeee
Q 002331          731 RHPNVVLFMGAVTRPPNLSIITEFLPRGSLFRILHRPHCQVDEKRRIKMALDVARGMN-CLHTSTPTIVHRDLKSPNLLV  809 (935)
Q Consensus       731 ~HPNIVkl~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~~~lse~~il~Ia~QIa~AL~-yLHs~g~~IIHrDLKPeNILL  809 (935)
                      .||++.  -.+-.+++.+.|.++.-+++.=+..++    .++...+++++.+|+.... +++.    -+|--|+|+||++
T Consensus        48 ~~~~f~--~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~f  117 (219)
T 4ano_A           48 VDPCIV--RDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLMF  117 (219)
T ss_dssp             SCSSSE--EEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEEE
T ss_pred             cCCCCC--eEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEEE
Confidence            578883  233356667777777654544444553    3678889988988887666 5544    4788899999999


Q ss_pred             cCCCcEEEEeccccccccCCcccCCCCCCCCCccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002331          810 DKNWNVKVSDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWI  877 (935)
Q Consensus       810 d~~g~VKL~DFGlA~~~~~~~~~~~s~~GT~~Y~APEvl~g~~~s~ksDIWSLG~ILyELLTG~~PF~  877 (935)
                      +.++.++|.-.|+-..                 ++|..     .+..-=+-.+=|++..++.++..|.
T Consensus       118 ~~~~~p~i~hRGi~~~-----------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          118 NRALEPFFLHVGVKES-----------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             CTTCCEEESCCEETTT-----------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             eCCCcEEEEEcCCccc-----------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999977664321                 22322     1222223347788888888877663


No 292
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=69.59  E-value=2.4  Score=51.05  Aligned_cols=31  Identities=16%  Similarity=0.230  Sum_probs=29.5

Q ss_pred             cccccchhhHHHHHHhhhccCCCeeeecccC
Q 002331          262 INIGLSRHRALLFKVLADSIRLPCRLVKGSH  292 (935)
Q Consensus       262 i~~G~~rhRalLfKvLaD~i~l~c~lv~G~~  292 (935)
                      .+.|.|++=|-||=+|+-.+|||||+|.|..
T Consensus       272 ~k~G~C~dfA~~~~~llRalGIPAR~VsGy~  302 (687)
T 2q3z_A          272 VKYGQCWVFAAVACTVLRCLGIPTRVVTNYN  302 (687)
T ss_dssp             EEEECHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             cceeehHHHHHHHHHHHHhCCCCcEEEeecc
Confidence            7899999999999999999999999999974


No 293
>2d3g_P Ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase...; protein-protein complex, UIM and ubiquitin; 1.70A {Bos taurus}
Probab=64.25  E-value=2.4  Score=29.53  Aligned_cols=14  Identities=64%  Similarity=0.812  Sum_probs=10.1

Q ss_pred             hHHHHHHHHHhhcccC
Q 002331           75 EEEFQVQLAMAISASS   90 (935)
Q Consensus        75 e~~~~~qla~a~~~~~   90 (935)
                      ||+  +|||+|||.|.
T Consensus         4 eEE--l~LAlAlS~sE   17 (26)
T 2d3g_P            4 EEE--LQLALALSQSE   17 (26)
T ss_pred             HHH--HHHHHHHHHHH
Confidence            455  77888888873


No 294
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=62.77  E-value=35  Score=37.82  Aligned_cols=146  Identities=13%  Similarity=0.152  Sum_probs=76.8

Q ss_pred             CCCCCC---eeEEEEeeecCcEEEEEEEECCceEEEEEeeccCCCHHHHHHHHHHHHHHHHcCCCceeeeecc-------
Q 002331          672 EIPWED---LVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALLEFKREVKIMRRLRHPNVVLFMGA-------  741 (935)
Q Consensus       672 ei~~ed---y~I~e~LG~G~fG~Vyka~~~g~~VAVK~i~~~~~~~~~~~~f~~Ei~iL~~L~HPNIVkl~g~-------  741 (935)
                      .|.|..   ++.++..-.|..|. |.+..++..|+||-.  .   ....+.+--++...-.+.-|+..-+...       
T Consensus        62 ~i~w~~l~~v~~I~~s~~Gstgv-ff~~td~~~~VVK~s--~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~  135 (342)
T 1cja_A           62 DINWKNLQQFKGIERSEKGTEGL-FFVETESGVFIVKRS--T---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNM  135 (342)
T ss_dssp             CCCTTCGGGEEEEEECCSTTSCE-EEEEESSCEEEEECC--T---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHH
T ss_pred             ccccccccCeeEEEeccCCCCCe-EEEEeCCCEEEEeCc--H---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHH
Confidence            455665   77778777777554 544447888999943  1   2223333334444444566654322211       


Q ss_pred             ------c---------ccCCceEEEEeeCCCCCHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcC-C-CEEe-eCC
Q 002331          742 ------V---------TRPPNLSIITEFLPRGSLFRILHRP-HCQVDEKRRIKMALDVARGMNCLHTST-P-TIVH-RDL  802 (935)
Q Consensus       742 ------~---------~~~~~l~LVmEy~~gGsL~dlL~~~-~~~lse~~il~Ia~QIa~AL~yLHs~g-~-~IIH-rDL  802 (935)
                            +         .....++++|||.+|..|..+-... ...+.+.....+.  -+-++..+..+. + +.+. .--
T Consensus       136 ~~~L~~~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~G  213 (342)
T 1cja_A          136 LECLAAIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEG  213 (342)
T ss_dssp             HHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCC
T ss_pred             HHHHHHhhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCC
Confidence                  0         0122467999999876655432110 0112333322211  133455555433 1 2222 124


Q ss_pred             CCCCeeecCCC-cEEEEecccccc
Q 002331          803 KSPNLLVDKNW-NVKVSDFGLSRL  825 (935)
Q Consensus       803 KPeNILLd~~g-~VKL~DFGlA~~  825 (935)
                      .+.|||++.++ .+.++|-+++..
T Consensus       214 N~~NIL~~~~n~~~~~IDhn~af~  237 (342)
T 1cja_A          214 NLDNIMLSERGATVVPIDSKIIPL  237 (342)
T ss_dssp             CGGGEEEESBTTCEEECSCCCCCC
T ss_pred             ChhheEEeCCCCeEEEEcCCcccc
Confidence            78999997644 488999988854


No 295
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=56.57  E-value=7.4  Score=46.79  Aligned_cols=80  Identities=16%  Similarity=0.234  Sum_probs=49.6

Q ss_pred             CchHHHHHHHHHHHHhhc-CCCCC-------ChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchhhHHHHHHhhhcc
Q 002331          210 TDVGILVQQLADLVNGHM-GGPVK-------DANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRHRALLFKVLADSI  281 (935)
Q Consensus       210 ~~~~~~~~~LA~lV~~~m-gg~~~-------~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rhRalLfKvLaD~i  281 (935)
                      .+...++..|+..|...- .|.+.       .....-..|.-....|++-+.+.+.|   ++.|.|.|=|-+|-.|+=.+
T Consensus       210 ~dpv~v~r~lsa~vn~~dD~gvl~g~W~~~y~~g~~P~~w~gs~~il~~~~~~~~~P---V~~G~C~~fA~v~~t~lR~l  286 (695)
T 1g0d_A          210 SDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTDGVAPYRWTGSVPILQQWSKAGVRP---VKYGQCWVFAAVACTVLRCL  286 (695)
T ss_dssp             TCHHHHHHHHHHHHTTCTTTCSEEECCSSCCTTSCCGGGCSBSHHHHHHHHHTTSCC---EEEECHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhccCcCceeecccccccCCCcCCcccCChHHHHHHHHHcCCCc---ccceeeHHHHHHHHHHHHhC
Confidence            345566788888886542 11111       01111233433333333333333333   58899999999999999999


Q ss_pred             CCCeeeecccC
Q 002331          282 RLPCRLVKGSH  292 (935)
Q Consensus       282 ~l~c~lv~G~~  292 (935)
                      |||||+|.|..
T Consensus       287 GIPaR~Vtgy~  297 (695)
T 1g0d_A          287 GIPTRPITNFA  297 (695)
T ss_dssp             TCCEEEEEEEE
T ss_pred             CCCeeEEcccc
Confidence            99999999984


No 296
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=51.03  E-value=61  Score=39.19  Aligned_cols=45  Identities=22%  Similarity=0.108  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHH--HHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          774 KRRIKMALDVAR--GMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       774 ~~il~Ia~QIa~--AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      ..+..++..+|-  -+.|+=..|      |-+++||||+.+|++.=+|||..-
T Consensus       529 ~ar~nF~~SlA~~Svv~YILGlG------DRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLLGVG------DRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCC------CCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHccCC------CCCCcceEEeCCCCEEEEeehhhh
Confidence            344555555443  345665554      999999999999999999999864


No 297
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=46.97  E-value=13  Score=40.08  Aligned_cols=102  Identities=18%  Similarity=0.225  Sum_probs=67.0

Q ss_pred             ChHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCCChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchh
Q 002331          190 DHALEELVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVKDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRH  269 (935)
Q Consensus       190 D~~L~~L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rh  269 (935)
                      .+.|..|.++-+.-...++..+...           ++|.++.=+..          .|-+++      +.+=+=|.|.+
T Consensus        32 ~~tl~~L~~L~~~hl~~IPFENLdv-----------~~g~~i~Ld~~----------~l~~Ki------V~~~RGGyC~E   84 (293)
T 3d9w_A           32 APTLATLRELVYRHTTAIPFENLEA-----------VLGRPVRLDLA----------TLQDKL------VHSRRGGYCYE   84 (293)
T ss_dssp             SSCHHHHHHHHHHHHHHSCBCCHHH-----------HTTCCCCCSHH----------HHHHHH------TSSSCCBCHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCccChhh-----------hcCCCCCCCHH----------HHHHHH------HHcCCCcChHH
Confidence            4677777777777777788877432           34555432221          111110      11224699999


Q ss_pred             hHHHHHHhhhccCCCeeeecccCCCCC-----CCCceEEE-EecCcceeeeeccc
Q 002331          270 RALLFKVLADSIRLPCRLVKGSHYTGV-----EDDAVNII-KLEEEREFLVDLMA  318 (935)
Q Consensus       270 RalLfKvLaD~i~l~c~lv~G~~~~g~-----~~~a~~~v-~~~~~~~~ivDlm~  318 (935)
                      --.||..+=-.+|..+.++.|.-+.+.     ..+..++| .++||+.||||.=+
T Consensus        85 lN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~H~~l~V~~l~dg~~ylvDVGF  139 (293)
T 3d9w_A           85 NAGLFAAALERLGFGVTGHTGRVTMGAGGLRPATHALLRVTTADDDRVWMCDVGF  139 (293)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEECTTCCSCCCEEEEEEEEECSSCSCEEEECCSS
T ss_pred             HHHHHHHHHHHcCCeEEEEEEEEecCCCCCCCCccEEEEEEEcCCCCeEEEecCC
Confidence            999999999999999888887765432     23566777 66558999999643


No 298
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=46.67  E-value=9.8  Score=46.04  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=29.7

Q ss_pred             ecccccchhhHHHHHHhhhccCCCeeeecccC
Q 002331          261 SINIGLSRHRALLFKVLADSIRLPCRLVKGSH  292 (935)
Q Consensus       261 ~i~~G~~rhRalLfKvLaD~i~l~c~lv~G~~  292 (935)
                      .++.|.|-|=|-+|-++.=.+|||||+|.|..
T Consensus       308 PV~~G~C~~fA~v~~~~lR~lGIPaRvVtgy~  339 (731)
T 1ex0_A          308 PVRYGQCWVFAGVFNTFLRCLGIPARIVTNYF  339 (731)
T ss_dssp             CEEEECHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             ccceeeehhHHHHHHHHHHhCCCCeeEEcccc
Confidence            36889999999999999999999999999975


No 299
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=46.58  E-value=17  Score=38.95  Aligned_cols=98  Identities=14%  Similarity=0.206  Sum_probs=61.7

Q ss_pred             ChHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCC-ChhHHHHhHHHHHHHHHHhhCCceeEeeecccccch
Q 002331          190 DHALEELVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVK-DANIMLARWMERSTELRRSLQTSVLPIGSINIGLSR  268 (935)
Q Consensus       190 D~~L~~L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~-~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~r  268 (935)
                      .+.|..|.++-+.-...++..+...+           +|.++. +.+....      +.+           ..=+=|.|.
T Consensus        22 ~~~l~~L~~L~~~h~~~IPFENLdv~-----------~g~~i~ld~~~l~~------KiV-----------~~~RGGyC~   73 (284)
T 1e2t_A           22 VPTVEALRTLHLAHNCAIPFENLDVL-----------LPREIQLDETALEE------KLL-----------YARRGGYCF   73 (284)
T ss_dssp             SCCHHHHHHHHHHHHHHSCEECHHHH-----------TTCCCCCSTTHHHH------HHT-----------TTCCCBCHH
T ss_pred             CCCHHHHHHHHHHHhhcCCcCChhHh-----------cCCCCCCCHHHHHH------HHh-----------cCCCcEEhH
Confidence            35666666666666667787774332           354543 2221111      111           122458999


Q ss_pred             hhHHHHHHhhhccCCCeeeecccCCCCC------CCCceEEEEecCcceeeeec
Q 002331          269 HRALLFKVLADSIRLPCRLVKGSHYTGV------EDDAVNIIKLEEEREFLVDL  316 (935)
Q Consensus       269 hRalLfKvLaD~i~l~c~lv~G~~~~g~------~~~a~~~v~~~~~~~~ivDl  316 (935)
                      +--.||..+=-.+|..+.++.|.-+.+.      .++..++|.+ +++.||||.
T Consensus        74 ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~H~~l~V~i-dg~~ylvDV  126 (284)
T 1e2t_A           74 ELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDV-EDEQWIADV  126 (284)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEE-TTEEEEECS
T ss_pred             HHHHHHHHHHHHCCCeEEEEEEEEecCCCCCCCCCccEEEEEEE-CCceEEEec
Confidence            9999999888899999999887655432      2234455666 788999994


No 300
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=39.33  E-value=24  Score=38.17  Aligned_cols=99  Identities=17%  Similarity=0.218  Sum_probs=63.2

Q ss_pred             ChHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCCChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchh
Q 002331          190 DHALEELVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVKDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRH  269 (935)
Q Consensus       190 D~~L~~L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rh  269 (935)
                      .+.|..|.++-+.-...++..+...+           +|.++.=+.          ..|-+++      +..=+=|.|.+
T Consensus        43 ~~~l~~L~~L~~~h~~~IPFENLdv~-----------~g~~i~ld~----------~~l~~Ki------V~~~RGGyC~E   95 (299)
T 1w4t_A           43 PPSLANLDRLIDAHLRRVAFENLDVL-----------LDRPIEIDA----------DKVFAKV------VEGSRGGYCFE   95 (299)
T ss_dssp             SSCHHHHHHHHHHHHHHSCEECHHHH-----------TTCCCCCSH----------HHHHHHH------TTTTCCBCHHH
T ss_pred             CCCHHHHHHHHHHHhhcCCCCChhHh-----------cCCCCCCCH----------HHHHHHH------HhcCCCcchHh
Confidence            46777777777777777887774432           355543222          1111110      11224599999


Q ss_pred             hHHHHHHhhhccCCCeeeecccCCCCC--------CCCceEEEEecCcceeeeec
Q 002331          270 RALLFKVLADSIRLPCRLVKGSHYTGV--------EDDAVNIIKLEEEREFLVDL  316 (935)
Q Consensus       270 RalLfKvLaD~i~l~c~lv~G~~~~g~--------~~~a~~~v~~~~~~~~ivDl  316 (935)
                      --.||..+=-.+|..+.++.|.-+.+.        .+...++|.+ +++.||||.
T Consensus        96 lN~Lf~~~L~~LGF~V~~l~arV~~~~~~~~~~~~~~H~~l~V~i-dg~~ylvDV  149 (299)
T 1w4t_A           96 LNSLFARLLLALGYELELLVARVRWGLPDDAPLTQQSHLMLRLYL-AEGEFLVDV  149 (299)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEECTTCCTTSCCCCEEEEEEEEEE-TTEEEEECS
T ss_pred             HHHHHHHHHHHcCCeEEEEEEEEEeCCCCcCCCCCCccEEEEEEE-CCceEEEeC
Confidence            999999888999999999877654322        1234466666 778999994


No 301
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.23  E-value=1.4e+02  Score=35.49  Aligned_cols=82  Identities=13%  Similarity=0.110  Sum_probs=49.7

Q ss_pred             eeeecccccCCceEEEEeeCCCCCHHHHHcCCC--------------CC--CCHHHHHHHHHHHHH--HHHHHHhcCCCE
Q 002331          736 VLFMGAVTRPPNLSIITEFLPRGSLFRILHRPH--------------CQ--VDEKRRIKMALDVAR--GMNCLHTSTPTI  797 (935)
Q Consensus       736 Vkl~g~~~~~~~l~LVmEy~~gGsL~dlL~~~~--------------~~--lse~~il~Ia~QIa~--AL~yLHs~g~~I  797 (935)
                      ++.|.+.-......| .|++++.++.+++.+.+              ..  ..+..+..++..+|-  -+.|+=..|   
T Consensus       402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGig---  477 (614)
T 3ls8_A          402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVG---  477 (614)
T ss_dssp             CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTCC---
T ss_pred             eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeecc---
Confidence            344444444444443 46777655555443211              00  123455556655443  455665554   


Q ss_pred             EeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          798 VHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       798 IHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                         |=.++||||+.+|++.=+|||..-
T Consensus       478 ---DRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          478 ---DRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             ---CCCTTSEEECTTSCEEECCCSSCT
T ss_pred             ---CCCCcceeEcCCCCEeeeehHHhh
Confidence               889999999999999999999873


No 302
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=35.02  E-value=30  Score=37.00  Aligned_cols=99  Identities=15%  Similarity=0.244  Sum_probs=61.5

Q ss_pred             ChHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCCCChhHHHHhHHHHHHHHHHhhCCceeEeeecccccchh
Q 002331          190 DHALEELVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPVKDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSRH  269 (935)
Q Consensus       190 D~~L~~L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~rh  269 (935)
                      .+.|..|.++-+.-...+|..+...+           +|.++.=+..          .|-+++      +..=+=|.|.+
T Consensus        23 ~~~l~~L~~L~~~h~~~IPFENLdv~-----------~g~~i~ld~~----------~l~~Ki------V~~~RGGyC~E   75 (278)
T 2bsz_A           23 NASLDTLKALHFAHPQAIPFENIDPF-----------LGRPVRLDLA----------ALQDKI------VLGGRGGYCFE   75 (278)
T ss_dssp             SSCHHHHHHHHHHHHHHSCEECHHHH-----------TTCCCCCSHH----------HHHHHH------TTSCCCBCHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCcCChhHh-----------cCCCCCCCHH----------HHHHHH------HhCCCCeehHH
Confidence            35666666666666666777774332           3544432221          111110      12224599999


Q ss_pred             hHHHHHHhhhccCCCeeeecccCCCCC-------CCCceEEEEecCcceeeeec
Q 002331          270 RALLFKVLADSIRLPCRLVKGSHYTGV-------EDDAVNIIKLEEEREFLVDL  316 (935)
Q Consensus       270 RalLfKvLaD~i~l~c~lv~G~~~~g~-------~~~a~~~v~~~~~~~~ivDl  316 (935)
                      --.||..+=-.+|..+.++.|.-+.+.       .++..++|.+ +|+.||||.
T Consensus        76 lN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~H~~l~V~i-dg~~ylvDV  128 (278)
T 2bsz_A           76 HNLLFMHALKALGFEVGGLAARVLWGQSEDAITARSHMLLRVEL-DGRTYIADV  128 (278)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEECSSCCSSSSCCCCEEEEEEEE-TTEEEEECS
T ss_pred             HHHHHHHHHHHCCCeEEEEEEEEeeCCCCCCCCCCccEEEEEEE-CCceEEEeC
Confidence            999999888899999999877654322       2234455666 778999994


No 303
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=34.38  E-value=28  Score=38.02  Aligned_cols=54  Identities=15%  Similarity=0.220  Sum_probs=41.3

Q ss_pred             ccccchhhHHHHHHhhhccCCCeeeecccCCCCC------C-CCceEEEEecCcceeeeecc
Q 002331          263 NIGLSRHRALLFKVLADSIRLPCRLVKGSHYTGV------E-DDAVNIIKLEEEREFLVDLM  317 (935)
Q Consensus       263 ~~G~~rhRalLfKvLaD~i~l~c~lv~G~~~~g~------~-~~a~~~v~~~~~~~~ivDlm  317 (935)
                      +=|.|.+--.||..+=-.+|..+.++.|.-+.+.      . ....++|.+ +++.||||.=
T Consensus        95 RGGyC~ElN~lf~~~L~~lGf~v~~~~arV~~~~~~~~~~~~~H~~l~V~~-~g~~ylvDVG  155 (309)
T 3lnb_A           95 RGGLCYELNSLLYYFLMDCGFQVYKVAGTVYDLYDNKWKPDDGHVIIILHH-NKKDYVIDAG  155 (309)
T ss_dssp             CCBCHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECSTTCEEEEEEEE-TTEEEEECSC
T ss_pred             CCcchHHHHHHHHHHHHHcCCeEEEEeEEEecCCCCCCCCCCccEEEEEEE-CCeEEEEecC
Confidence            4599999999999999999999999987755321      1 234455555 7889999963


No 304
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=31.55  E-value=30  Score=37.26  Aligned_cols=53  Identities=15%  Similarity=0.194  Sum_probs=39.3

Q ss_pred             ccccchhhHHHHHHhhhccCCCeeeecccCCCC-------CCCCceEEEEecCcceeeeec
Q 002331          263 NIGLSRHRALLFKVLADSIRLPCRLVKGSHYTG-------VEDDAVNIIKLEEEREFLVDL  316 (935)
Q Consensus       263 ~~G~~rhRalLfKvLaD~i~l~c~lv~G~~~~g-------~~~~a~~~v~~~~~~~~ivDl  316 (935)
                      +=|.|.+--.||..+=-.+|..+.++.|.-+..       ..++..++|.+ +++.||||.
T Consensus        69 RGGyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~~H~~l~V~i-dg~~ylvDV  128 (295)
T 2ija_A           69 RGGWCLQVNHLLYWALTTIGFETTMLGGYVYSTPAKKYSTGMIHLLLQVTI-DGRNYIVDA  128 (295)
T ss_dssp             CCBCHHHHHHHHHHHHHHHTCEEEEEEEEEEETTTTEECSSCCEEEEEEEE-TTEEEEECS
T ss_pred             CcEEhHHHHHHHHHHHHHcCCcEEEEEEEEeeCCCCCCCCCCCcEEEEEEE-CCceEEEeC
Confidence            458999999999988888998888877654432       12345566666 788999994


No 305
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.93  E-value=2e+02  Score=36.59  Aligned_cols=60  Identities=15%  Similarity=0.042  Sum_probs=39.0

Q ss_pred             CHHHHHcCCCCCCCHHH-HHHHHHHHHH--HHHHHHhcCCCEEeeCCCCCCeeecCCCcEEEEeccccc
Q 002331          759 SLFRILHRPHCQVDEKR-RIKMALDVAR--GMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSR  824 (935)
Q Consensus       759 sL~dlL~~~~~~lse~~-il~Ia~QIa~--AL~yLHs~g~~IIHrDLKPeNILLd~~g~VKL~DFGlA~  824 (935)
                      .|.+++........+.. +..++..+|-  .+.|+=..|      |=.++||||+.+|++.=+|||..-
T Consensus       899 ~L~~~f~~~~~~~~~~~ar~nF~~S~A~ysvv~YiLgig------DRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          899 TLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIG------DRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             HHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHTCC------CCCTTTEEEETTSCEEECCCCCCS
T ss_pred             HHHHHHHhcCChHHHHHHHHHHHHHhhhhhheEEEEeec------CCCCcceEEeCCCCEEEEeehhhh
Confidence            45555554332333333 3445555443  345655444      889999999999999999999873


No 306
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=22.60  E-value=66  Score=34.32  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=39.1

Q ss_pred             ccccchhhHHHHHHhhhccCCCeeeecccCCCC--------CCCCceEEEEecCcce--eeeec
Q 002331          263 NIGLSRHRALLFKVLADSIRLPCRLVKGSHYTG--------VEDDAVNIIKLEEERE--FLVDL  316 (935)
Q Consensus       263 ~~G~~rhRalLfKvLaD~i~l~c~lv~G~~~~g--------~~~~a~~~v~~~~~~~--~ivDl  316 (935)
                      +=|.|.+--.||..+=-.+|..+.++.|.-+.+        ..++..++|.+ +++.  ||||.
T Consensus        66 RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~i-dg~~~~ylvDV  128 (280)
T 2vfb_A           66 RGGYCYEHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTF-PGCQGPYLVDV  128 (280)
T ss_dssp             CCBCHHHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEEC-TTCSSCEEECS
T ss_pred             CceEhHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEE-CCeEEEEEEec
Confidence            459999999999988888999998877765422        12234455666 6778  99994


No 307
>1ffk_I Ribosomal protein L15E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.12.1.2
Probab=22.04  E-value=32  Score=34.95  Aligned_cols=37  Identities=30%  Similarity=0.430  Sum_probs=27.0

Q ss_pred             CCCCCChhhhcc--ccCCCC---eEEEEEec-----ccChHHHHHHH
Q 002331          162 QGKLPSLAHLES--NLGNSG---FEVVIVNR-----TIDHALEELVQ  198 (935)
Q Consensus       162 ~~~iPsl~~L~~--~~~~~~---~EvIlVDr-----~~D~~L~~L~~  198 (935)
                      .-+.|.|+=|.+  +.+|+.   |||||||-     +.|++++=+.+
T Consensus       106 grk~~nLrVLNSYWV~qD~~yK~yEVILVDp~H~aIr~Dp~~nWI~~  152 (194)
T 1ffk_I          106 NRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSR  152 (194)
T ss_pred             hccCCCceeeeeEEeccCCceeEEEEEEEcCCcHhhhcCcccccccc
Confidence            567888888888  455554   39999995     57888776544


No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.62  E-value=10  Score=43.22  Aligned_cols=30  Identities=7%  Similarity=-0.061  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHHHHcCCCceeeeecccccC
Q 002331          716 ALLEFKREVKIMRRLRHPNVVLFMGAVTRP  745 (935)
Q Consensus       716 ~~~~f~~Ei~iL~~L~HPNIVkl~g~~~~~  745 (935)
                      ...+|..|++++.+++|+|+|+++|||...
T Consensus       322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          322 GSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            356799999999999999999999999764


No 309
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=21.53  E-value=61  Score=34.57  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=60.9

Q ss_pred             ChHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhcCCCC-CChhHHHHhHHHHHHHHHHhhCCceeEeeecccccch
Q 002331          190 DHALEELVQVAQCIALDLPATDVGILVQQLADLVNGHMGGPV-KDANIMLARWMERSTELRRSLQTSVLPIGSINIGLSR  268 (935)
Q Consensus       190 D~~L~~L~~~a~~~~~~l~~~~~~~~~~~LA~lV~~~mgg~~-~~~~~~~~~~~~~~~~l~~~~~s~v~plg~i~~G~~r  268 (935)
                      .+.|..|.++-+.-...++..+...+           +|.++ .=+.          ..|-+++      +..=+=|.|.
T Consensus        22 ~~~l~~L~~L~~~h~~~IPFENLdv~-----------~g~~i~~ld~----------~~l~~Ki------V~~~RGGyC~   74 (278)
T 1w5r_A           22 RPDLGTLHAIVAAHNRSIPFENLDPL-----------LGIPVADLSA----------EALFAKL------VDRRRGGYQY   74 (278)
T ss_dssp             CSSHHHHHHHHHHHHHHSCEECHHHH-----------TTCCCCCCSH----------HHHHHHH------TTTCCCBCHH
T ss_pred             CCCHHHHHHHHHHHhhCCCccChhhh-----------cCCCCCCCCH----------HHHHHHH------hcCCCceehH
Confidence            46677776666666677887774332           35444 2111          1111110      1122459999


Q ss_pred             hhHHHHHHhhhccCCCeeeecccCCCCC--------CCCceEEEEecCcce--eeeec
Q 002331          269 HRALLFKVLADSIRLPCRLVKGSHYTGV--------EDDAVNIIKLEEERE--FLVDL  316 (935)
Q Consensus       269 hRalLfKvLaD~i~l~c~lv~G~~~~g~--------~~~a~~~v~~~~~~~--~ivDl  316 (935)
                      +--.||..+=-.+|..+.++.|.-+.+.        .++..++|.+ +++.  ||||.
T Consensus        75 ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~i-dg~~~~ylvDV  131 (278)
T 1w5r_A           75 EHNGLLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAV-PGADGRYLVDV  131 (278)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEEC-SSCSCCEEECS
T ss_pred             HHHHHHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEE-CCeEEEEEEec
Confidence            9999999888899999998777654221        1234455666 6778  99994


No 310
>3jyw_L 60S ribosomal protein L15(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 3izc_P 3izs_P 3o58_O 3o5h_O 3u5e_N 3u5i_N 4b6a_N 1s1i_L
Probab=20.41  E-value=29  Score=35.21  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=25.0

Q ss_pred             CCCCCChhhhcc--ccCCCCe---EEEEEec-----ccChHHHHH
Q 002331          162 QGKLPSLAHLES--NLGNSGF---EVVIVNR-----TIDHALEEL  196 (935)
Q Consensus       162 ~~~iPsl~~L~~--~~~~~~~---EvIlVDr-----~~D~~L~~L  196 (935)
                      .-+.|.|+=|.+  ..+|+.+   ||||||-     +.|++++=+
T Consensus       106 grk~~nLrVLNSYwV~eDg~yK~fEVILVDp~H~aIr~Dp~~nWI  150 (192)
T 3jyw_L          106 GRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWI  150 (192)
T ss_dssp             HTTSSSSEEEEEEEEEECSSCEEEEEEEECSSCSSTTTSSTTTGG
T ss_pred             hccCCCcEEeeeeeecCCCCcceEEEEEecCCchhhccCCccccc
Confidence            557888888888  4445433   9999995     678876554


Done!