Query 002336
Match_columns 935
No_of_seqs 639 out of 4457
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 22:09:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002336.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002336hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 5.8E-49 2E-53 437.7 17.8 259 614-891 42-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-49 7.6E-54 435.2 12.3 261 612-891 12-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 3.6E-49 1.2E-53 435.3 13.2 262 609-889 22-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.9E-47 6.4E-52 420.2 17.0 257 615-890 38-300 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 5.6E-47 1.9E-51 420.6 18.4 261 615-900 60-326 (336)
6 4fih_A Serine/threonine-protei 100.0 1E-46 3.5E-51 419.7 18.6 247 615-883 76-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 1E-46 3.5E-51 420.3 17.8 249 614-883 25-276 (350)
8 3fpq_A Serine/threonine-protei 100.0 4.4E-46 1.5E-50 406.3 20.5 244 616-883 29-282 (290)
9 3hmm_A TGF-beta receptor type- 100.0 2.6E-46 9E-51 412.6 17.1 267 615-891 5-298 (303)
10 4ase_A Vascular endothelial gr 100.0 1.5E-46 5E-51 421.8 13.2 266 609-892 60-349 (353)
11 4fie_A Serine/threonine-protei 100.0 1E-45 3.6E-50 421.5 20.2 247 615-883 153-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-46 6.5E-51 411.5 11.8 246 614-882 33-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 2.4E-45 8.1E-50 397.2 15.9 244 614-883 14-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-45 6.1E-50 403.6 8.3 246 614-883 25-281 (304)
15 4g31_A Eukaryotic translation 100.0 6.4E-44 2.2E-48 392.1 18.3 249 614-883 6-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 6.2E-42 2.1E-46 380.6 21.8 276 615-893 41-318 (321)
17 4b99_A Mitogen-activated prote 100.0 6.3E-42 2.1E-46 390.6 16.1 260 614-884 55-345 (398)
18 3uim_A Brassinosteroid insensi 100.0 1.3E-41 4.3E-46 378.6 17.2 287 605-891 20-312 (326)
19 4f9c_A Cell division cycle 7-r 100.0 1.2E-40 4.3E-45 375.7 19.4 194 614-818 22-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 1.3E-40 4.5E-45 397.6 19.1 250 614-883 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 4.4E-40 1.5E-44 391.3 18.1 247 615-884 191-450 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 4.1E-40 1.4E-44 363.9 15.0 259 614-894 11-286 (310)
23 3p86_A Serine/threonine-protei 100.0 2E-39 6.9E-44 358.9 17.9 261 612-892 36-300 (309)
24 2nru_A Interleukin-1 receptor- 100.0 2.1E-38 7.2E-43 349.3 24.1 279 604-890 14-306 (307)
25 3fxz_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 351.8 19.8 248 614-883 21-269 (297)
26 2psq_A Fibroblast growth facto 100.0 6.8E-39 2.3E-43 363.8 19.5 264 612-894 80-368 (370)
27 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.4E-39 8.1E-44 349.7 14.1 259 612-892 7-266 (268)
28 3kul_A Ephrin type-A receptor 100.0 3.3E-39 1.1E-43 359.7 15.7 264 609-893 45-316 (325)
29 4hcu_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 348.0 15.5 256 613-890 10-266 (269)
30 3soc_A Activin receptor type-2 100.0 2.2E-39 7.5E-44 360.5 13.2 264 614-891 25-319 (322)
31 4eqm_A Protein kinase; transfe 100.0 1.1E-38 3.8E-43 350.2 17.8 264 613-894 11-279 (294)
32 2c30_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 349.3 22.9 257 605-883 25-294 (321)
33 3gen_A Tyrosine-protein kinase 100.0 8.8E-39 3E-43 348.1 15.9 259 612-892 23-282 (283)
34 3ugc_A Tyrosine-protein kinase 100.0 5.9E-40 2E-44 359.8 6.6 267 611-891 8-292 (295)
35 3zgw_A Maternal embryonic leuc 100.0 8.7E-39 3E-43 359.4 15.4 248 614-884 11-261 (347)
36 3q4u_A Activin receptor type-1 100.0 3.6E-38 1.2E-42 345.9 20.0 259 614-888 9-300 (301)
37 3fe3_A MAP/microtubule affinit 100.0 1.6E-38 5.4E-43 354.8 16.9 245 615-884 17-265 (328)
38 3tt0_A Basic fibroblast growth 100.0 2E-38 6.9E-43 361.5 16.6 273 609-900 65-362 (382)
39 3tki_A Serine/threonine-protei 100.0 3E-38 1E-42 351.8 17.1 250 615-884 9-262 (323)
40 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-39 1.4E-43 366.5 10.2 258 613-891 114-375 (377)
41 1qcf_A Haematopoetic cell kina 100.0 6.5E-39 2.2E-43 374.0 11.2 259 612-892 187-446 (454)
42 1csn_A Casein kinase-1; phosph 100.0 1.5E-37 5.2E-42 340.5 21.5 263 614-893 11-286 (298)
43 4euu_A Serine/threonine-protei 100.0 2.3E-37 7.9E-42 343.4 23.0 269 615-890 11-309 (319)
44 1opk_A P150, C-ABL, proto-onco 100.0 6E-39 2E-43 378.2 10.6 258 612-890 219-478 (495)
45 2qol_A Ephrin receptor; recept 100.0 5E-39 1.7E-43 365.3 9.5 261 611-892 43-311 (373)
46 2izr_A Casein kinase I isoform 100.0 8.4E-38 2.9E-42 348.8 18.8 260 615-892 11-283 (330)
47 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-38 2.6E-42 345.7 17.8 261 614-897 9-270 (307)
48 1o6l_A RAC-beta serine/threoni 100.0 9.6E-38 3.3E-42 349.7 18.5 246 615-884 7-261 (337)
49 3t9t_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42 339.0 14.9 255 614-890 9-264 (267)
50 1mp8_A Focal adhesion kinase 1 100.0 2.5E-38 8.6E-43 344.5 12.9 260 612-893 14-279 (281)
51 3niz_A Rhodanese family protei 100.0 1.2E-37 4E-42 345.0 18.3 260 614-883 22-300 (311)
52 4e5w_A Tyrosine-protein kinase 100.0 7.2E-39 2.5E-43 352.0 8.4 266 610-889 18-301 (302)
53 3kfa_A Tyrosine-protein kinase 100.0 3.2E-38 1.1E-42 344.3 13.1 261 610-891 10-272 (288)
54 1k9a_A Carboxyl-terminal SRC k 100.0 7.2E-38 2.5E-42 364.7 16.9 252 613-891 193-446 (450)
55 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-38 6.2E-43 370.0 11.7 259 613-893 184-443 (452)
56 2ivs_A Proto-oncogene tyrosine 100.0 8.1E-38 2.8E-42 345.3 16.2 261 612-891 22-312 (314)
57 3lb7_A RAF proto-oncogene seri 100.0 1.1E-37 3.7E-42 344.7 17.2 265 609-892 32-302 (307)
58 1luf_A Muscle-specific tyrosin 100.0 9.9E-38 3.4E-42 349.3 17.1 261 613-892 47-337 (343)
59 2y0a_A Death-associated protei 100.0 1.7E-37 5.9E-42 346.0 18.6 252 612-884 10-272 (326)
60 3lxl_A Tyrosine-protein kinase 100.0 7E-39 2.4E-43 356.9 7.3 270 612-895 22-308 (327)
61 3poz_A Epidermal growth factor 100.0 2.2E-38 7.6E-43 353.2 11.4 257 613-891 15-279 (327)
62 2yab_A Death-associated protei 100.0 2.9E-37 9.9E-42 349.0 20.5 249 614-883 13-272 (361)
63 3vhe_A Vascular endothelial gr 100.0 5.1E-38 1.8E-42 354.1 14.3 263 612-892 21-357 (359)
64 2bdw_A Hypothetical protein K1 100.0 2.7E-37 9.3E-42 349.6 20.3 254 610-884 26-285 (362)
65 2zv2_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41 338.5 20.4 247 614-883 14-292 (298)
66 3dtc_A Mitogen-activated prote 100.0 9.6E-38 3.3E-42 337.5 15.5 249 614-888 8-271 (271)
67 1rjb_A FL cytokine receptor; k 100.0 3.4E-38 1.2E-42 353.6 12.2 266 610-893 42-337 (344)
68 1qpc_A LCK kinase; alpha beta 100.0 5.4E-38 1.8E-42 341.1 13.4 259 613-893 13-272 (279)
69 3lxp_A Non-receptor tyrosine-p 100.0 3E-38 1E-42 350.6 11.6 263 616-894 34-314 (318)
70 1t46_A HOMO sapiens V-KIT hard 100.0 4.8E-38 1.6E-42 347.0 13.0 263 612-892 22-309 (313)
71 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-37 6E-42 345.8 17.6 249 619-883 17-270 (325)
72 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-38 7.6E-43 359.2 10.3 266 609-893 67-348 (367)
73 4f0f_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 334.6 20.8 252 613-888 19-287 (287)
74 3qd2_B Eukaryotic translation 100.0 1.9E-37 6.6E-42 344.6 17.5 250 613-883 6-325 (332)
75 3qup_A Tyrosine-protein kinase 100.0 8.9E-38 3.1E-42 347.0 14.7 264 611-893 21-301 (323)
76 4dc2_A Protein kinase C IOTA t 100.0 2.6E-37 9E-42 353.0 18.9 248 614-878 53-307 (396)
77 3c0i_A Peripheral plasma membr 100.0 1.6E-37 5.6E-42 349.9 16.9 255 611-883 22-286 (351)
78 3op5_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 349.7 18.2 269 613-893 35-332 (364)
79 3gni_B Strad alpha; kinase fol 100.0 6E-37 2E-41 349.9 20.9 260 614-884 26-334 (389)
80 3ll6_A Cyclin G-associated kin 100.0 2.5E-37 8.4E-42 344.5 17.3 259 612-893 27-311 (337)
81 4fvq_A Tyrosine-protein kinase 100.0 7.1E-38 2.4E-42 341.8 12.7 255 611-892 6-277 (289)
82 3soa_A Calcium/calmodulin-depe 100.0 6.6E-37 2.3E-41 355.3 21.4 253 612-884 10-268 (444)
83 1tki_A Titin; serine kinase, m 100.0 7.4E-37 2.5E-41 340.2 20.7 250 614-884 6-258 (321)
84 1ob3_A PFPK5, cell division co 100.0 2.1E-37 7.3E-42 338.5 16.0 259 615-883 4-280 (288)
85 4fr4_A YANK1, serine/threonine 100.0 4.4E-37 1.5E-41 349.9 19.1 249 613-883 15-271 (384)
86 3mdy_A Bone morphogenetic prot 100.0 9.7E-37 3.3E-41 340.2 21.4 268 609-893 33-334 (337)
87 1kob_A Twitchin; kinase, intra 100.0 5.9E-37 2E-41 349.7 20.0 251 614-884 52-305 (387)
88 2pvf_A Fibroblast growth facto 100.0 1.9E-37 6.5E-42 346.5 15.3 265 612-895 34-323 (334)
89 3a8x_A Protein kinase C IOTA t 100.0 4.7E-37 1.6E-41 345.3 18.5 248 614-878 10-264 (345)
90 3kmu_A ILK, integrin-linked ki 100.0 4.5E-37 1.6E-41 331.4 17.5 252 613-890 10-270 (271)
91 3cc6_A Protein tyrosine kinase 100.0 1.2E-37 4E-42 339.0 13.0 258 614-893 13-276 (281)
92 1b6c_B TGF-B superfamily recep 100.0 1.1E-36 3.7E-41 340.7 21.0 268 608-892 37-338 (342)
93 3o0g_A Cell division protein k 100.0 3.7E-37 1.3E-41 337.2 16.6 260 615-883 4-282 (292)
94 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-37 3.6E-42 351.6 12.6 247 613-883 23-280 (353)
95 4aw2_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 356.7 16.9 253 615-884 76-339 (437)
96 2buj_A Serine/threonine-protei 100.0 5E-37 1.7E-41 339.9 17.3 261 613-890 29-306 (317)
97 3kex_A Receptor tyrosine-prote 100.0 1E-37 3.5E-42 347.5 11.8 256 614-891 14-277 (325)
98 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-37 7.4E-42 346.6 14.3 244 615-884 11-259 (336)
99 4hgt_A Casein kinase I isoform 100.0 1.4E-36 4.9E-41 332.2 20.3 264 613-893 9-283 (296)
100 2wqm_A Serine/threonine-protei 100.0 9.5E-37 3.3E-41 336.7 19.1 264 614-894 33-301 (310)
101 1u59_A Tyrosine-protein kinase 100.0 1.1E-36 3.9E-41 332.4 19.4 259 616-896 12-278 (287)
102 2h8h_A Proto-oncogene tyrosine 100.0 5.6E-38 1.9E-42 373.4 9.8 259 612-892 266-525 (535)
103 2h34_A Serine/threonine-protei 100.0 1E-36 3.6E-41 336.8 19.3 259 614-892 35-298 (309)
104 3p1a_A MYT1 kinase, membrane-a 100.0 4.9E-37 1.7E-41 339.9 16.5 250 607-883 51-304 (311)
105 2x4f_A Myosin light chain kina 100.0 1.1E-36 3.6E-41 346.1 19.3 251 618-888 94-349 (373)
106 1fot_A TPK1 delta, CAMP-depend 100.0 6.1E-37 2.1E-41 340.4 16.8 243 615-884 8-259 (318)
107 3uzp_A CKI-delta, CKID, casein 100.0 3E-36 1E-40 329.9 22.1 263 614-893 10-283 (296)
108 3a62_A Ribosomal protein S6 ki 100.0 5.7E-37 1.9E-41 341.9 16.4 248 613-884 17-277 (327)
109 3og7_A AKAP9-BRAF fusion prote 100.0 3.7E-37 1.3E-41 336.8 14.6 263 609-890 20-288 (289)
110 3f66_A Hepatocyte growth facto 100.0 7.5E-37 2.6E-41 335.4 17.0 258 615-893 27-294 (298)
111 2a19_B Interferon-induced, dou 100.0 8.3E-37 2.8E-41 332.0 17.2 256 609-895 7-279 (284)
112 3v8s_A RHO-associated protein 100.0 3.1E-37 1.1E-41 354.2 14.5 251 614-884 70-330 (410)
113 2pmi_A Negative RE, cyclin-dep 100.0 7.1E-37 2.4E-41 339.5 16.7 262 614-883 6-293 (317)
114 3pls_A Macrophage-stimulating 100.0 7.9E-37 2.7E-41 334.8 16.8 260 616-895 24-292 (298)
115 3g2f_A Bone morphogenetic prot 100.0 5.2E-37 1.8E-41 342.6 15.3 272 614-898 14-326 (336)
116 4eut_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 348.9 18.1 271 615-892 11-311 (396)
117 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-36 5.9E-41 328.9 18.7 249 613-883 9-261 (277)
118 3ork_A Serine/threonine protei 100.0 5E-37 1.7E-41 339.6 14.6 259 614-891 13-282 (311)
119 1xjd_A Protein kinase C, theta 100.0 2.5E-37 8.5E-42 347.4 12.3 245 614-882 18-268 (345)
120 4agu_A Cyclin-dependent kinase 100.0 7E-37 2.4E-41 337.7 15.7 260 615-884 5-285 (311)
121 2vd5_A DMPK protein; serine/th 100.0 5.6E-37 1.9E-41 352.3 15.4 253 614-884 62-328 (412)
122 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-36 3.9E-41 342.7 17.6 248 614-883 54-305 (349)
123 1mqb_A Ephrin type-A receptor 100.0 5.8E-37 2E-41 342.7 14.9 261 612-893 43-312 (333)
124 2v62_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41 341.9 17.4 268 610-890 34-328 (345)
125 2a2a_A Death-associated protei 100.0 3.2E-36 1.1E-40 334.6 20.6 251 612-883 11-272 (321)
126 2yex_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 326.1 19.9 251 613-883 7-261 (276)
127 3cok_A Serine/threonine-protei 100.0 1.7E-36 6E-41 329.0 17.7 246 615-883 13-262 (278)
128 2jii_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 341.2 18.4 264 614-893 43-339 (352)
129 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.7E-37 3.3E-41 343.4 16.1 244 614-884 42-294 (350)
130 2xir_A Vascular endothelial gr 100.0 8.4E-37 2.9E-41 337.5 15.3 264 612-893 26-313 (316)
131 3dbq_A Dual specificity protei 100.0 8.5E-37 2.9E-41 342.7 15.5 248 615-884 11-274 (343)
132 3gxj_A TGF-beta receptor type- 100.0 1.9E-38 6.6E-43 348.3 2.0 262 614-892 4-299 (303)
133 2w1i_A JAK2; chromosomal rearr 100.0 8.9E-37 3.1E-41 339.8 15.4 266 612-891 40-323 (326)
134 3g33_A Cell division protein k 100.0 6.5E-37 2.2E-41 337.9 14.1 265 609-883 5-296 (308)
135 2eue_A Carbon catabolite derep 100.0 1E-36 3.5E-41 330.5 15.3 243 615-883 15-262 (275)
136 3fdn_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 330.7 15.6 244 615-884 11-258 (279)
137 3lzb_A Epidermal growth factor 100.0 3.4E-37 1.2E-41 343.8 11.6 258 613-892 15-280 (327)
138 2jam_A Calcium/calmodulin-depe 100.0 4.4E-36 1.5E-40 330.6 20.3 250 612-883 8-261 (304)
139 1p4o_A Insulin-like growth fac 100.0 3E-37 1E-41 342.4 11.0 261 612-891 24-300 (322)
140 3c1x_A Hepatocyte growth facto 100.0 9.1E-37 3.1E-41 346.6 15.2 260 615-895 91-360 (373)
141 2i0e_A Protein kinase C-beta I 100.0 9.3E-37 3.2E-41 343.8 15.0 248 613-884 20-277 (353)
142 3llt_A Serine/threonine kinase 100.0 5.4E-37 1.9E-41 346.2 13.0 200 611-820 33-263 (360)
143 3hko_A Calcium/calmodulin-depe 100.0 2.1E-36 7.2E-41 339.0 17.7 256 612-883 25-330 (345)
144 2i1m_A Macrophage colony-stimu 100.0 2.4E-37 8.4E-42 345.0 9.9 264 612-893 45-329 (333)
145 3brb_A Proto-oncogene tyrosine 100.0 1.2E-36 4E-41 336.5 15.2 262 612-892 33-310 (313)
146 2ozo_A Tyrosine-protein kinase 100.0 2.1E-36 7.1E-41 365.2 18.4 253 620-894 343-602 (613)
147 3bhy_A Death-associated protei 100.0 2.2E-36 7.6E-41 328.9 16.8 257 612-889 4-273 (283)
148 1xbb_A Tyrosine-protein kinase 100.0 1.4E-36 4.8E-41 332.4 15.2 258 614-894 17-283 (291)
149 3is5_A Calcium-dependent prote 100.0 3.6E-36 1.2E-40 328.4 18.4 251 613-883 22-278 (285)
150 1fvr_A Tyrosine-protein kinase 100.0 4E-37 1.4E-41 342.7 11.0 263 610-893 22-303 (327)
151 2qr7_A Ribosomal protein S6 ki 100.0 1.3E-36 4.6E-41 341.2 15.2 251 612-883 21-277 (342)
152 3uc3_A Serine/threonine-protei 100.0 2E-36 7E-41 342.3 16.6 251 614-884 21-275 (361)
153 1byg_A CSK, protein (C-termina 100.0 3.2E-37 1.1E-41 335.0 9.5 253 613-892 21-275 (278)
154 2zmd_A Dual specificity protei 100.0 1.6E-36 5.5E-41 346.7 15.6 248 615-884 58-321 (390)
155 3dls_A PAS domain-containing s 100.0 1.8E-36 6.2E-41 339.1 15.6 242 612-884 23-275 (335)
156 2y94_A 5'-AMP-activated protei 100.0 2.9E-36 9.8E-41 352.4 17.9 244 615-883 18-266 (476)
157 3kk8_A Calcium/calmodulin depe 100.0 5.1E-36 1.8E-40 326.2 18.6 248 615-883 8-261 (284)
158 1u5q_A Serine/threonine protei 100.0 5.3E-36 1.8E-40 337.2 19.2 247 612-884 53-306 (348)
159 2rku_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 329.9 16.7 246 615-884 17-266 (294)
160 4ejn_A RAC-alpha serine/threon 100.0 6.1E-37 2.1E-41 356.5 11.7 248 614-884 149-405 (446)
161 3lm5_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 334.9 17.5 257 609-884 24-288 (327)
162 2ac3_A MAP kinase-interacting 100.0 4E-36 1.4E-40 332.5 17.2 257 615-883 14-295 (316)
163 1t4h_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 325.1 20.2 245 615-883 28-282 (290)
164 2clq_A Mitogen-activated prote 100.0 4.7E-36 1.6E-40 328.1 17.3 248 618-883 27-278 (295)
165 4fl3_A Tyrosine-protein kinase 100.0 2E-36 6.9E-41 366.4 15.7 249 619-890 375-631 (635)
166 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-36 5.9E-41 342.0 13.8 254 613-885 54-323 (355)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.4E-36 2.2E-40 338.4 18.5 253 613-892 65-341 (365)
168 2r5t_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 345.6 12.2 249 613-885 38-291 (373)
169 3mtl_A Cell division protein k 100.0 1.5E-36 5E-41 338.0 12.6 259 615-883 4-281 (324)
170 2vgo_A Serine/threonine-protei 100.0 4.5E-36 1.5E-40 327.0 16.1 244 614-883 15-262 (284)
171 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-36 1.1E-40 327.4 14.9 245 612-883 10-279 (289)
172 3eqc_A Dual specificity mitoge 100.0 1.7E-36 5.8E-41 342.2 13.1 264 612-884 32-325 (360)
173 2yfx_A Tyrosine-protein kinase 100.0 1.2E-36 4.2E-41 338.7 11.6 266 609-893 26-307 (327)
174 3oz6_A Mitogen-activated prote 100.0 2.8E-36 9.7E-41 344.3 14.7 262 612-884 8-329 (388)
175 1nxk_A MAP kinase-activated pr 100.0 1.6E-35 5.3E-40 339.7 20.8 245 619-884 68-322 (400)
176 2owb_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 336.2 15.4 246 614-883 42-291 (335)
177 2acx_A G protein-coupled recep 100.0 6.2E-36 2.1E-40 354.9 17.9 251 615-884 186-445 (576)
178 3ttj_A Mitogen-activated prote 100.0 1E-35 3.6E-40 347.5 19.5 260 614-884 63-356 (464)
179 3i6u_A CDS1, serine/threonine- 100.0 6.8E-36 2.3E-40 344.8 17.5 255 609-884 131-400 (419)
180 3a7i_A MST3 kinase, serine/thr 100.0 7.7E-36 2.6E-40 328.3 17.0 246 615-884 24-271 (303)
181 4aaa_A Cyclin-dependent kinase 100.0 2.3E-36 7.7E-41 337.3 12.8 262 614-884 26-307 (331)
182 3sv0_A Casein kinase I-like; t 100.0 2.1E-35 7.1E-40 345.8 21.5 262 614-892 8-280 (483)
183 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-36 7.4E-41 337.4 12.6 259 614-883 35-318 (329)
184 2w5a_A Serine/threonine-protei 100.0 2.7E-36 9.3E-41 327.5 12.8 253 614-886 7-270 (279)
185 2h6d_A 5'-AMP-activated protei 100.0 7.2E-36 2.5E-40 323.6 16.1 246 614-884 12-262 (276)
186 2wtk_C Serine/threonine-protei 100.0 2.2E-35 7.5E-40 324.6 20.0 248 615-884 7-264 (305)
187 2j7t_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 329.1 14.4 250 614-883 20-275 (302)
188 1ua2_A CAK, cell division prot 100.0 1.1E-35 3.8E-40 334.1 17.1 263 612-884 9-292 (346)
189 1u46_A ACK-1, activated CDC42 100.0 5.8E-36 2E-40 326.7 14.4 258 613-891 18-285 (291)
190 3mi9_A Cell division protein k 100.0 9.8E-36 3.3E-40 334.8 16.5 261 614-883 18-311 (351)
191 3byv_A Rhoptry kinase; malaria 100.0 8.6E-37 2.9E-41 347.3 7.6 239 615-883 75-359 (377)
192 3n9x_A Phosphotransferase; mal 100.0 4.4E-35 1.5E-39 339.4 21.6 197 614-817 27-253 (432)
193 1cm8_A Phosphorylated MAP kina 100.0 9.7E-36 3.3E-40 337.5 15.8 255 614-884 26-308 (367)
194 3com_A Serine/threonine-protei 100.0 2.6E-35 9E-40 325.6 18.9 251 611-883 27-278 (314)
195 3rp9_A Mitogen-activated prote 100.0 1.6E-35 5.6E-40 345.6 18.0 191 614-811 54-279 (458)
196 1wak_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 337.4 17.9 266 608-883 32-391 (397)
197 3nsz_A CK II alpha, casein kin 100.0 4.5E-35 1.5E-39 326.1 20.4 256 613-883 36-319 (330)
198 2y7j_A Phosphorylase B kinase 100.0 2.2E-35 7.6E-40 334.3 18.0 250 613-883 94-359 (365)
199 3fme_A Dual specificity mitoge 100.0 9.3E-36 3.2E-40 324.9 14.1 251 613-883 7-266 (290)
200 3lij_A Calcium/calmodulin depe 100.0 1.7E-35 5.7E-40 348.9 17.0 251 612-884 36-292 (494)
201 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-35 8.5E-40 348.7 18.0 247 615-878 187-438 (543)
202 2ycf_A Serine/threonine-protei 100.0 2.3E-35 8E-40 327.7 16.6 254 609-883 6-274 (322)
203 3mwu_A Calmodulin-domain prote 100.0 1.8E-35 6.3E-40 347.9 16.3 251 612-884 21-277 (486)
204 3nyv_A Calmodulin-domain prote 100.0 1.8E-35 6.1E-40 347.8 16.0 252 611-884 24-282 (484)
205 2vwi_A Serine/threonine-protei 100.0 4.4E-36 1.5E-40 329.4 9.8 256 614-883 16-287 (303)
206 3q60_A ROP5B; pseudokinase, tr 100.0 3.9E-36 1.3E-40 341.0 9.7 251 615-883 64-352 (371)
207 2pml_X PFPK7, Ser/Thr protein 100.0 4.6E-35 1.6E-39 328.5 17.9 257 614-883 32-322 (348)
208 2r3i_A Cell division protein k 100.0 4.6E-35 1.6E-39 321.1 17.5 258 615-883 5-283 (299)
209 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-35 5.2E-40 328.1 13.5 257 613-892 33-304 (319)
210 3pg1_A Mitogen-activated prote 100.0 1.5E-35 5E-40 334.7 13.6 260 614-884 23-317 (362)
211 4e7w_A Glycogen synthase kinas 100.0 1.7E-35 5.9E-40 338.7 14.3 259 614-884 41-322 (394)
212 3qyz_A Mitogen-activated prote 100.0 1.1E-34 3.8E-39 328.2 20.8 260 614-884 28-314 (364)
213 1blx_A Cyclin-dependent kinase 100.0 3.5E-35 1.2E-39 326.2 16.3 260 614-883 12-296 (326)
214 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-35 9.7E-40 358.7 16.7 246 614-883 342-597 (674)
215 1phk_A Phosphorylase kinase; g 100.0 5.1E-35 1.8E-39 320.6 17.1 249 614-883 18-283 (298)
216 2j0j_A Focal adhesion kinase 1 100.0 2.1E-35 7.3E-40 358.7 15.4 261 610-892 387-653 (656)
217 1z57_A Dual specificity protei 100.0 5.3E-35 1.8E-39 325.6 17.3 262 613-884 14-329 (339)
218 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-34 3.8E-39 342.8 20.9 250 613-884 36-302 (504)
219 2xrw_A Mitogen-activated prote 100.0 9.8E-35 3.3E-39 329.6 19.4 260 614-884 26-319 (371)
220 2x7f_A TRAF2 and NCK-interacti 100.0 5.5E-35 1.9E-39 324.8 17.0 248 615-883 26-286 (326)
221 1q8y_A SR protein kinase; tran 100.0 1.4E-34 4.7E-39 327.6 20.5 268 613-890 19-342 (373)
222 3an0_A Dual specificity mitoge 100.0 3.6E-35 1.2E-39 328.6 15.5 250 614-883 52-310 (340)
223 1zy4_A Serine/threonine-protei 100.0 1.1E-34 3.8E-39 317.7 18.8 250 613-883 6-283 (303)
224 3eb0_A Putative uncharacterize 100.0 2.4E-35 8.2E-40 336.1 13.9 258 614-884 8-322 (383)
225 2i6l_A Mitogen-activated prote 100.0 2.6E-35 8.8E-40 325.7 13.6 259 614-883 12-305 (320)
226 3kvw_A DYRK2, dual specificity 100.0 8.5E-35 2.9E-39 336.6 18.5 198 613-820 97-303 (429)
227 3rgf_A Cyclin-dependent kinase 100.0 1.5E-34 5.1E-39 332.1 19.7 200 615-820 22-240 (405)
228 2fst_X Mitogen-activated prote 100.0 1.5E-35 5.1E-40 335.9 11.0 255 614-884 30-312 (367)
229 3cek_A Dual specificity protei 100.0 1.5E-34 5.1E-39 319.7 18.4 250 613-884 28-293 (313)
230 1j1b_A Glycogen synthase kinas 100.0 3.6E-35 1.2E-39 338.9 13.9 259 614-884 55-337 (420)
231 3e3p_A Protein kinase, putativ 100.0 3.8E-35 1.3E-39 330.7 12.3 262 613-884 23-315 (360)
232 2b9h_A MAP kinase FUS3, mitoge 100.0 6.7E-35 2.3E-39 327.8 14.1 258 614-883 12-305 (353)
233 2vx3_A Dual specificity tyrosi 100.0 6.5E-34 2.2E-38 324.1 21.7 199 614-820 55-262 (382)
234 4exu_A Mitogen-activated prote 100.0 3.2E-34 1.1E-38 325.4 18.2 254 614-884 43-324 (371)
235 3aln_A Dual specificity mitoge 100.0 1.4E-34 4.7E-39 322.1 14.7 252 615-883 24-285 (327)
236 2eu9_A Dual specificity protei 100.0 1.6E-34 5.4E-39 324.2 15.3 259 612-883 18-333 (355)
237 2wei_A Calmodulin-domain prote 100.0 4.4E-34 1.5E-38 311.9 18.4 253 609-883 18-276 (287)
238 3coi_A Mitogen-activated prote 100.0 1.8E-34 6.2E-39 324.9 15.7 253 615-884 26-306 (353)
239 3fhr_A MAP kinase-activated pr 100.0 7.2E-34 2.4E-38 318.1 18.2 249 615-883 30-287 (336)
240 2iwi_A Serine/threonine-protei 100.0 1.1E-34 3.8E-39 320.5 10.8 243 609-883 27-283 (312)
241 2rio_A Serine/threonine-protei 100.0 5.8E-34 2E-38 330.2 16.5 247 618-883 20-295 (434)
242 3qa8_A MGC80376 protein; kinas 100.0 3.7E-34 1.3E-38 343.0 14.4 268 613-890 14-309 (676)
243 2dyl_A Dual specificity mitoge 100.0 1E-33 3.6E-38 312.9 16.7 249 614-883 26-283 (318)
244 3a99_A Proto-oncogene serine/t 100.0 3.5E-34 1.2E-38 318.3 11.8 239 613-883 43-293 (320)
245 3p23_A Serine/threonine-protei 100.0 1.7E-33 5.9E-38 325.8 14.9 246 615-883 26-283 (432)
246 3uqc_A Probable conserved tran 100.0 1.1E-32 3.7E-37 301.5 19.4 234 613-893 31-268 (286)
247 2pzi_A Probable serine/threoni 100.0 3.9E-33 1.3E-37 341.4 15.3 239 613-889 80-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 9.5E-32 3.3E-36 295.5 19.5 220 619-883 24-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.8E-32 6E-37 315.7 13.5 237 617-883 82-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 9.5E-33 3.2E-37 308.6 10.8 242 611-882 18-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 5.1E-27 1.7E-31 280.2 4.5 186 619-815 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 6.3E-24 2.1E-28 252.0 5.2 183 618-817 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 5E-21 1.7E-25 208.4 6.1 140 617-788 94-251 (282)
254 1zth_A RIO1 serine protein kin 99.7 1.9E-17 6.3E-22 177.8 9.4 137 616-765 50-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.6 2.4E-16 8.2E-21 174.0 10.1 150 369-518 3-161 (313)
256 4ecn_A Leucine-rich repeat pro 99.6 1.6E-15 5.5E-20 188.3 10.0 158 354-517 248-526 (876)
257 4eco_A Uncharacterized protein 99.5 4.6E-15 1.6E-19 179.8 8.3 145 368-517 26-284 (636)
258 4gyi_A RIO2 kinase; protein ki 99.5 6.8E-15 2.3E-19 165.0 6.6 136 615-764 97-264 (397)
259 3rgz_A Protein brassinosteroid 99.5 1.6E-14 5.5E-19 179.0 4.2 111 412-522 631-743 (768)
260 2wfh_A SLIT homolog 2 protein 99.4 2.9E-13 9.8E-18 138.5 8.2 120 401-522 11-142 (193)
261 1w8a_A SLIT protein; signaling 99.4 3.5E-13 1.2E-17 137.6 7.1 123 400-522 8-142 (192)
262 3rgz_A Protein brassinosteroid 99.3 5.5E-13 1.9E-17 165.2 7.7 131 368-503 8-145 (768)
263 2o6r_A Variable lymphocyte rec 99.3 2.2E-12 7.6E-17 129.6 8.6 125 395-521 3-139 (177)
264 2v70_A SLIT-2, SLIT homolog 2 99.3 1.9E-12 6.4E-17 135.2 7.6 111 412-522 56-169 (220)
265 3e6j_A Variable lymphocyte rec 99.3 2.6E-12 9E-17 134.9 8.6 122 392-517 14-146 (229)
266 4fcg_A Uncharacterized protein 99.3 5.7E-13 2E-17 147.9 2.5 132 368-505 23-171 (328)
267 2v9t_B SLIT homolog 2 protein 99.3 4.6E-12 1.6E-16 132.2 8.4 111 412-522 55-168 (220)
268 3g39_A Variable lymphocyte rec 99.2 1.2E-11 4.1E-16 123.7 7.4 103 416-522 12-118 (170)
269 3g39_A Variable lymphocyte rec 99.2 9.2E-12 3.1E-16 124.5 6.5 102 400-501 9-119 (170)
270 3e6j_A Variable lymphocyte rec 99.2 1.7E-11 5.8E-16 128.7 8.8 109 412-522 63-175 (229)
271 1ogq_A PGIP-2, polygalacturona 99.2 1.9E-12 6.3E-17 142.8 1.3 108 415-522 199-307 (313)
272 2r9u_A Variable lymphocyte rec 99.2 1.7E-11 5.9E-16 123.0 8.0 103 416-522 15-121 (174)
273 2o6s_A Variable lymphocyte rec 99.2 3.1E-11 1E-15 124.5 8.9 121 395-517 3-135 (208)
274 2v9t_B SLIT homolog 2 protein 99.2 2.3E-11 8E-16 126.9 7.2 119 400-518 11-140 (220)
275 1w8a_A SLIT protein; signaling 99.2 1.3E-11 4.4E-16 125.9 5.0 91 412-502 53-144 (192)
276 1p9a_G Platelet glycoprotein I 99.2 4.5E-11 1.5E-15 130.2 9.0 110 412-522 99-211 (290)
277 2ifg_A High affinity nerve gro 99.1 1.7E-11 5.7E-16 136.9 5.5 102 418-522 13-119 (347)
278 3m19_A Variable lymphocyte rec 99.1 6.6E-11 2.3E-15 125.8 9.1 110 412-521 82-194 (251)
279 2v70_A SLIT-2, SLIT homolog 2 99.1 3.6E-11 1.2E-15 125.4 6.5 123 395-518 7-141 (220)
280 2jwp_A Malectin, MGC80075; sug 99.1 3.4E-10 1.1E-14 113.5 12.8 141 25-171 7-171 (174)
281 2r9u_A Variable lymphocyte rec 99.1 5.4E-11 1.8E-15 119.4 6.8 90 412-502 32-122 (174)
282 2o6s_A Variable lymphocyte rec 99.1 1.1E-10 3.8E-15 120.2 9.1 109 412-521 51-163 (208)
283 3rfs_A Internalin B, repeat mo 99.1 1E-10 3.6E-15 125.9 9.3 111 412-522 108-221 (272)
284 2ell_A Acidic leucine-rich nuc 99.1 4E-11 1.4E-15 119.2 5.3 104 412-517 23-131 (168)
285 4fcg_A Uncharacterized protein 99.1 4.8E-11 1.7E-15 132.3 6.4 107 412-519 182-290 (328)
286 2je0_A Acidic leucine-rich nuc 99.1 3.2E-11 1.1E-15 117.3 3.2 104 413-517 17-124 (149)
287 4g8a_A TOLL-like receptor 4; l 99.1 7.2E-11 2.5E-15 142.0 6.9 113 411-523 467-584 (635)
288 3tm0_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.5E-15 121.6 9.9 140 615-763 16-212 (263)
289 2o6q_A Variable lymphocyte rec 99.1 2.4E-10 8.4E-15 122.8 9.1 110 412-522 108-221 (270)
290 3m19_A Variable lymphocyte rec 99.1 2E-10 7E-15 122.0 8.3 105 412-517 34-142 (251)
291 2o6q_A Variable lymphocyte rec 99.0 1.5E-10 5.3E-15 124.4 7.4 106 412-517 36-144 (270)
292 2z81_A CD282 antigen, TOLL-lik 99.0 9.5E-11 3.2E-15 139.0 6.1 117 400-517 4-134 (549)
293 4g8a_A TOLL-like receptor 4; l 99.0 1.3E-10 4.6E-15 139.6 5.9 105 412-517 51-159 (635)
294 3v47_A TOLL-like receptor 5B a 99.0 2.1E-10 7.1E-15 132.6 6.7 111 412-523 298-412 (455)
295 2ifg_A High affinity nerve gro 99.0 2.4E-10 8.3E-15 127.4 6.5 103 396-499 4-118 (347)
296 2z66_A Variable lymphocyte rec 99.0 2.4E-10 8E-15 125.1 6.1 111 412-522 149-264 (306)
297 1ozn_A Reticulon 4 receptor; N 99.0 2.3E-10 7.8E-15 123.9 5.7 110 412-522 128-241 (285)
298 3v47_A TOLL-like receptor 5B a 99.0 1.7E-10 5.7E-15 133.4 4.3 106 412-517 29-140 (455)
299 2xot_A Amphoterin-induced prot 99.0 3.5E-10 1.2E-14 127.1 6.7 117 401-517 19-147 (361)
300 2o6r_A Variable lymphocyte rec 99.0 3.7E-10 1.3E-14 113.2 5.9 90 412-501 51-141 (177)
301 4b8c_D Glucose-repressible alc 99.0 4.6E-10 1.6E-14 137.8 7.7 105 412-519 223-329 (727)
302 4eco_A Uncharacterized protein 99.0 5.2E-10 1.8E-14 135.4 8.1 106 413-520 488-601 (636)
303 2z80_A TOLL-like receptor 2, v 99.0 3.6E-10 1.2E-14 126.4 6.0 116 400-517 30-160 (353)
304 3zyj_A Leucine-rich repeat-con 99.0 4.4E-10 1.5E-14 129.7 6.8 109 412-523 184-296 (440)
305 3vq2_A TLR4, TOLL-like recepto 99.0 2.7E-10 9.2E-15 136.9 5.2 111 412-523 447-562 (606)
306 1p9a_G Platelet glycoprotein I 99.0 7.9E-10 2.7E-14 120.3 8.3 106 411-518 75-184 (290)
307 2xot_A Amphoterin-induced prot 99.0 4.8E-10 1.7E-14 125.9 6.7 107 413-521 88-204 (361)
308 3rfs_A Internalin B, repeat mo 98.9 1E-09 3.5E-14 118.1 8.8 107 412-518 84-193 (272)
309 2xwt_C Thyrotropin receptor; s 98.9 3.3E-10 1.1E-14 119.3 4.7 124 393-518 4-142 (239)
310 1nd4_A Aminoglycoside 3'-phosp 98.9 1.5E-09 5.1E-14 115.2 9.8 131 620-764 26-214 (264)
311 2wfh_A SLIT homolog 2 protein 98.9 5.3E-10 1.8E-14 114.1 5.9 89 412-500 53-142 (193)
312 1dce_A Protein (RAB geranylger 98.9 4.6E-10 1.6E-14 133.6 6.1 82 414-497 464-546 (567)
313 2z62_A TOLL-like receptor 4, v 98.9 6.8E-10 2.3E-14 119.5 6.5 106 412-517 27-135 (276)
314 1dce_A Protein (RAB geranylger 98.9 4.2E-10 1.4E-14 134.0 5.3 102 414-519 442-546 (567)
315 4ecn_A Leucine-rich repeat pro 98.9 9.3E-10 3.2E-14 136.7 8.0 104 414-519 729-840 (876)
316 3zyi_A Leucine-rich repeat-con 98.9 6.7E-10 2.3E-14 128.7 6.1 109 412-523 195-307 (452)
317 3zyi_A Leucine-rich repeat-con 98.9 1.2E-09 4.1E-14 126.5 7.5 115 402-517 56-182 (452)
318 4b8c_D Glucose-repressible alc 98.9 3.2E-10 1.1E-14 139.1 2.6 93 412-506 246-338 (727)
319 4ezg_A Putative uncharacterize 98.9 9E-10 3.1E-14 112.5 5.2 103 412-517 87-192 (197)
320 3vq2_A TLR4, TOLL-like recepto 98.9 1.4E-09 4.7E-14 130.6 7.7 106 412-517 31-139 (606)
321 2id5_A Lingo-1, leucine rich r 98.9 1.5E-09 5.1E-14 126.4 7.3 118 401-518 12-140 (477)
322 3oja_A Leucine-rich immune mol 98.9 8.1E-10 2.8E-14 129.3 4.7 107 412-521 143-252 (487)
323 1ozn_A Reticulon 4 receptor; N 98.9 2.1E-09 7.1E-14 116.3 7.4 107 412-518 104-213 (285)
324 1xku_A Decorin; proteoglycan, 98.9 1.8E-09 6.1E-14 119.4 7.0 106 413-520 192-307 (330)
325 1a9n_A U2A', U2A'; complex (nu 98.9 1.2E-09 4.1E-14 109.5 5.0 101 413-518 19-125 (176)
326 3o6n_A APL1; leucine-rich repe 98.9 7.7E-10 2.6E-14 125.4 3.7 108 412-521 247-354 (390)
327 1wwl_A Monocyte differentiatio 98.9 5.9E-10 2E-14 122.5 2.6 106 412-517 94-212 (312)
328 2z63_A TOLL-like receptor 4, v 98.9 1.5E-09 5E-14 129.1 6.2 112 412-523 420-535 (570)
329 2ell_A Acidic leucine-rich nuc 98.8 9.1E-10 3.1E-14 109.2 3.7 89 413-502 71-164 (168)
330 3t6q_A CD180 antigen; protein- 98.8 1.7E-09 5.9E-14 129.8 6.8 127 391-517 2-140 (606)
331 2z62_A TOLL-like receptor 4, v 98.8 2.6E-09 9E-14 114.9 7.3 93 413-505 52-146 (276)
332 3j0a_A TOLL-like receptor 5; m 98.8 1.7E-09 5.7E-14 135.4 6.4 106 412-517 23-134 (844)
333 2je0_A Acidic leucine-rich nuc 98.8 6.6E-10 2.3E-14 107.9 2.0 89 411-502 40-130 (149)
334 3oja_B Anopheles plasmodium-re 98.8 9.2E-10 3.1E-14 132.2 3.7 108 412-521 253-360 (597)
335 2ft3_A Biglycan; proteoglycan, 98.8 2.3E-09 7.9E-14 118.7 6.0 106 413-520 193-308 (332)
336 3t6q_A CD180 antigen; protein- 98.8 1.9E-09 6.5E-14 129.4 5.4 108 413-521 449-562 (606)
337 1a9n_A U2A', U2A'; complex (nu 98.8 1.1E-09 3.7E-14 109.8 2.6 87 413-503 42-131 (176)
338 3o53_A Protein LRIM1, AGAP0063 98.8 2.3E-09 7.8E-14 118.1 4.7 107 412-521 143-252 (317)
339 3j0a_A TOLL-like receptor 5; m 98.8 2.1E-09 7.2E-14 134.5 4.9 107 412-521 450-562 (844)
340 3oja_B Anopheles plasmodium-re 98.8 5.4E-09 1.9E-13 125.5 8.0 106 411-517 97-203 (597)
341 3zyj_A Leucine-rich repeat-con 98.8 4.8E-09 1.6E-13 121.0 7.2 115 402-517 45-171 (440)
342 2z66_A Variable lymphocyte rec 98.8 3.8E-09 1.3E-13 115.4 5.7 108 412-519 125-236 (306)
343 3dxp_A Putative acyl-COA dehyd 98.8 1.3E-08 4.5E-13 114.0 9.8 141 618-764 43-248 (359)
344 2ft3_A Biglycan; proteoglycan, 98.8 5.9E-09 2E-13 115.4 6.7 115 400-518 33-159 (332)
345 2id5_A Lingo-1, leucine rich r 98.8 6.5E-09 2.2E-13 121.0 7.1 105 413-517 56-163 (477)
346 2z7x_B TOLL-like receptor 1, v 98.8 2.8E-09 9.7E-14 125.4 4.1 106 412-517 323-432 (520)
347 4glp_A Monocyte differentiatio 98.8 2.7E-09 9.1E-14 117.1 3.6 106 412-518 168-284 (310)
348 2z7x_B TOLL-like receptor 1, v 98.7 5.3E-09 1.8E-13 123.1 6.3 105 413-521 374-483 (520)
349 4ezg_A Putative uncharacterize 98.7 4E-09 1.4E-13 107.7 4.5 88 414-504 45-132 (197)
350 1xku_A Decorin; proteoglycan, 98.7 1E-08 3.6E-13 113.2 7.6 116 400-518 31-157 (330)
351 1ziw_A TOLL-like receptor 3; i 98.7 8.1E-09 2.8E-13 125.7 7.3 85 413-497 25-110 (680)
352 3a79_B TLR6, VLRB.59, TOLL-lik 98.7 6.5E-09 2.2E-13 123.8 6.3 103 412-517 51-157 (562)
353 3o6n_A APL1; leucine-rich repe 98.7 1.4E-08 4.7E-13 115.0 8.6 105 412-517 92-197 (390)
354 3a79_B TLR6, VLRB.59, TOLL-lik 98.7 1.1E-08 3.7E-13 121.8 7.2 106 412-517 352-461 (562)
355 3oja_A Leucine-rich immune mol 98.7 4.4E-09 1.5E-13 123.1 2.9 106 411-518 56-181 (487)
356 1ziw_A TOLL-like receptor 3; i 98.7 1.3E-08 4.4E-13 124.0 7.1 106 412-517 72-182 (680)
357 2z81_A CD282 antigen, TOLL-lik 98.7 8.9E-09 3.1E-13 121.9 5.5 90 413-502 50-141 (549)
358 1wwl_A Monocyte differentiatio 98.7 2.1E-09 7.2E-14 118.1 0.0 105 412-517 120-239 (312)
359 4glp_A Monocyte differentiatio 98.7 7.7E-09 2.6E-13 113.4 4.3 85 414-498 92-183 (310)
360 2z63_A TOLL-like receptor 4, v 98.7 1.7E-08 5.9E-13 119.8 7.5 93 412-504 75-169 (570)
361 2xwt_C Thyrotropin receptor; s 98.7 9.7E-09 3.3E-13 108.0 4.5 103 413-517 80-190 (239)
362 3cvr_A Invasion plasmid antige 98.7 7.5E-09 2.6E-13 122.9 3.7 87 402-502 50-137 (571)
363 4ay9_X Follicle-stimulating ho 98.6 1.9E-08 6.6E-13 112.3 6.2 103 399-503 8-122 (350)
364 2z80_A TOLL-like receptor 2, v 98.6 1.8E-08 6.1E-13 112.5 5.0 93 413-505 100-195 (353)
365 1h6t_A Internalin B; cell adhe 98.6 2.8E-08 9.6E-13 108.0 5.4 100 412-518 111-212 (291)
366 3cvr_A Invasion plasmid antige 98.6 4.9E-08 1.7E-12 115.9 7.5 92 414-518 121-219 (571)
367 4fmz_A Internalin; leucine ric 98.6 2.4E-08 8.1E-13 111.0 4.4 103 412-517 242-344 (347)
368 3sg8_A APH(2'')-ID; antibiotic 98.6 1.2E-08 4E-13 111.7 1.9 186 619-817 26-288 (304)
369 1xeu_A Internalin C; cellular 98.6 5.6E-08 1.9E-12 104.0 7.1 99 412-518 62-162 (263)
370 1h6t_A Internalin B; cell adhe 98.6 5.2E-08 1.8E-12 105.9 6.8 101 412-517 89-189 (291)
371 1h6u_A Internalin H; cell adhe 98.6 3.1E-08 1E-12 108.6 4.9 102 412-518 128-229 (308)
372 1h6u_A Internalin H; cell adhe 98.5 6.1E-08 2.1E-12 106.2 6.8 101 412-518 106-207 (308)
373 1ds9_A Outer arm dynein; leuci 98.5 1.7E-09 5.9E-14 110.5 -5.5 102 412-518 47-152 (198)
374 1m9s_A Internalin B; cell inva 98.5 5.7E-08 2E-12 116.4 6.6 99 412-517 108-208 (605)
375 1ds9_A Outer arm dynein; leuci 98.5 3.6E-09 1.2E-13 108.1 -3.9 100 414-517 19-126 (198)
376 1xeu_A Internalin C; cellular 98.5 8.8E-08 3E-12 102.5 6.5 99 412-518 40-140 (263)
377 1m9s_A Internalin B; cell inva 98.5 5.8E-08 2E-12 116.3 5.5 85 412-502 130-214 (605)
378 3o53_A Protein LRIM1, AGAP0063 98.5 2.1E-08 7.1E-13 110.4 1.1 91 412-505 168-259 (317)
379 2jwp_A Malectin, MGC80075; sug 98.5 1.7E-07 5.8E-12 93.7 7.6 152 189-361 7-170 (174)
380 1o6v_A Internalin A; bacterial 98.4 9.6E-08 3.3E-12 110.9 4.6 100 413-517 287-386 (466)
381 1o6v_A Internalin A; bacterial 98.4 1.4E-07 5E-12 109.4 6.1 80 413-497 265-344 (466)
382 1jl5_A Outer protein YOPM; leu 98.4 1.1E-07 3.6E-12 110.2 4.9 87 413-506 317-420 (454)
383 3bz5_A Internalin-J, INLJ; leu 98.4 2.2E-07 7.5E-12 107.7 7.2 18 434-451 188-205 (457)
384 3bz5_A Internalin-J, INLJ; leu 98.4 2.7E-07 9.3E-12 106.9 7.5 96 412-516 63-158 (457)
385 1jl5_A Outer protein YOPM; leu 98.4 4.4E-07 1.5E-11 105.1 8.0 96 413-517 131-226 (454)
386 3g06_A SSPH2 (leucine-rich rep 98.3 1.3E-07 4.6E-12 113.4 3.2 85 413-505 221-305 (622)
387 4fmz_A Internalin; leucine ric 98.3 2.3E-07 8E-12 102.9 4.6 103 412-519 220-324 (347)
388 3r70_A Aminoglycoside phosphot 98.3 1.9E-06 6.4E-11 94.9 10.0 133 618-765 42-238 (320)
389 2ca6_A RAN GTPase-activating p 98.2 4.4E-08 1.5E-12 110.8 -3.7 84 414-497 160-257 (386)
390 3g06_A SSPH2 (leucine-rich rep 98.2 8.2E-07 2.8E-11 106.6 7.1 94 414-519 202-297 (622)
391 2ca6_A RAN GTPase-activating p 98.2 5.2E-08 1.8E-12 110.2 -4.3 107 413-519 187-316 (386)
392 3d1u_A Putative fructosamine-3 98.2 4.5E-06 1.5E-10 90.4 11.0 140 618-763 20-215 (288)
393 3ovc_A Hygromycin-B 4-O-kinase 98.2 1.6E-06 5.4E-11 97.3 7.3 74 618-697 46-122 (362)
394 3rw6_A Nuclear RNA export fact 98.2 3.4E-07 1.2E-11 97.7 1.7 65 435-501 168-237 (267)
395 3goz_A Leucine-rich repeat-con 98.2 1.7E-07 5.7E-12 105.1 -1.0 89 413-501 22-126 (362)
396 4gkh_A Aminoglycoside 3'-phosp 98.1 6.4E-06 2.2E-10 87.9 10.8 135 619-763 30-222 (272)
397 3tdw_A Gentamicin resistance p 98.1 9.2E-06 3.1E-10 88.8 11.5 135 619-764 25-224 (306)
398 2ast_B S-phase kinase-associat 98.1 1.6E-07 5.3E-12 103.7 -2.8 103 413-516 70-178 (336)
399 2ast_B S-phase kinase-associat 98.0 5.5E-07 1.9E-11 99.3 -1.7 102 413-517 47-153 (336)
400 3ats_A Putative uncharacterize 97.9 1E-05 3.5E-10 90.1 7.9 80 619-698 26-122 (357)
401 3rw6_A Nuclear RNA export fact 97.9 5.9E-07 2E-11 95.8 -2.2 78 412-490 169-257 (267)
402 4ay9_X Follicle-stimulating ho 97.9 9.5E-06 3.2E-10 90.3 6.9 102 414-516 129-233 (350)
403 3goz_A Leucine-rich repeat-con 97.9 1.1E-06 3.8E-11 98.4 -1.5 101 417-517 2-120 (362)
404 1z7x_W Ribonuclease inhibitor; 97.7 1.5E-06 5.2E-11 100.2 -5.3 105 413-517 284-409 (461)
405 1z7x_W Ribonuclease inhibitor; 97.6 8.7E-07 3E-11 102.2 -7.6 90 413-502 256-359 (461)
406 2olc_A MTR kinase, methylthior 97.6 0.00014 4.7E-09 82.3 9.8 75 618-694 35-120 (397)
407 2q83_A YTAA protein; 2635576, 97.5 0.00017 5.9E-09 79.2 9.5 140 619-763 38-251 (346)
408 3sb4_A Hypothetical leucine ri 97.4 5.5E-05 1.9E-09 83.2 3.9 90 413-506 226-318 (329)
409 3f7w_A Putative fructosamine-3 97.3 0.00057 2E-08 73.5 10.3 74 618-695 20-96 (288)
410 3un9_A NLR family member X1; l 97.3 8E-06 2.7E-10 91.8 -4.6 84 414-497 156-252 (372)
411 2pyw_A Uncharacterized protein 97.3 0.00025 8.4E-09 80.9 7.3 80 733-813 231-313 (420)
412 3jr1_A Putative fructosamine-3 97.3 0.00062 2.1E-08 74.3 9.8 137 619-760 42-232 (312)
413 3un9_A NLR family member X1; l 97.1 2.6E-05 9E-10 87.6 -3.4 84 414-497 102-196 (372)
414 1io0_A Tropomodulin; LRR prote 96.9 4.9E-05 1.7E-09 76.4 -3.3 85 413-497 36-136 (185)
415 3ogk_B Coronatine-insensitive 96.8 6.5E-05 2.2E-09 89.4 -4.3 65 433-497 432-501 (592)
416 1io0_A Tropomodulin; LRR prote 96.7 5.8E-05 2E-09 75.9 -4.7 85 413-497 65-164 (185)
417 3dxq_A Choline/ethanolamine ki 96.7 0.003 1E-07 68.3 8.5 138 618-764 23-202 (301)
418 3csv_A Aminoglycoside phosphot 96.7 0.0058 2E-07 66.9 10.7 142 619-765 24-218 (333)
419 1nw1_A Choline kinase (49.2 KD 96.6 0.0029 9.9E-08 72.2 8.2 71 619-695 79-158 (429)
420 2ppq_A HSK, HK, homoserine kin 96.6 0.01 3.4E-07 64.5 11.5 142 619-763 28-216 (322)
421 1zyl_A Hypothetical protein YI 96.5 0.012 4E-07 64.2 11.8 141 620-764 33-223 (328)
422 2qg7_A Ethanolamine kinase PV0 96.5 0.0075 2.6E-07 69.3 10.1 73 619-696 114-188 (458)
423 2p1m_B Transport inhibitor res 96.4 0.00015 5E-09 86.3 -5.0 106 412-518 396-518 (594)
424 3feg_A Choline/ethanolamine ki 96.4 0.0075 2.6E-07 67.5 9.1 141 619-764 56-254 (379)
425 3e4g_A ATP synthase subunit S, 96.3 0.00035 1.2E-08 69.3 -1.9 85 413-497 61-153 (176)
426 3ogk_B Coronatine-insensitive 96.3 0.00086 3E-08 79.6 0.8 34 458-492 218-251 (592)
427 3c5i_A Choline kinase; choline 96.2 0.0065 2.2E-07 67.7 7.5 72 619-695 39-120 (369)
428 3rfe_A Platelet glycoprotein I 96.1 0.0035 1.2E-07 59.0 4.0 55 417-473 12-68 (130)
429 2p1m_B Transport inhibitor res 96.0 0.00043 1.5E-08 82.1 -3.3 83 413-495 105-195 (594)
430 3i1a_A Spectinomycin phosphotr 95.8 0.026 8.9E-07 62.1 10.2 68 622-696 32-108 (339)
431 2ra8_A Uncharacterized protein 95.8 0.00099 3.4E-08 74.3 -1.4 86 413-498 193-293 (362)
432 2yle_A Protein spire homolog 1 95.8 0.057 2E-06 54.9 11.4 104 694-816 33-136 (229)
433 3sb4_A Hypothetical leucine ri 95.4 0.0067 2.3E-07 66.3 3.4 77 413-491 250-328 (329)
434 3f2s_A CK, chetk-alpha, cholin 95.4 0.034 1.2E-06 62.5 9.0 141 619-763 58-279 (401)
435 3rfe_A Platelet glycoprotein I 95.3 0.011 3.6E-07 55.6 3.8 53 441-496 12-67 (130)
436 2ra8_A Uncharacterized protein 95.1 0.0022 7.6E-08 71.4 -1.7 86 412-500 171-268 (362)
437 4fdw_A Leucine rich hypothetic 93.8 0.042 1.4E-06 62.0 4.8 75 415-492 250-331 (401)
438 3mes_A Choline kinase; malaria 93.8 0.13 4.3E-06 58.4 8.8 141 618-764 75-291 (424)
439 4fdw_A Leucine rich hypothetic 93.3 0.05 1.7E-06 61.4 4.3 88 413-505 271-365 (401)
440 1pgv_A TMD-1, tropomodulin TMD 90.8 0.025 8.6E-07 56.9 -1.9 83 413-495 41-137 (197)
441 3e4g_A ATP synthase subunit S, 88.0 0.058 2E-06 53.3 -1.6 70 428-497 52-128 (176)
442 3g15_A CK, chetk-alpha, cholin 87.1 1.1 3.7E-05 50.2 8.0 30 735-764 245-280 (401)
443 4h09_A Hypothetical leucine ri 83.9 0.73 2.5E-05 50.9 4.5 87 414-505 264-352 (379)
444 4fs7_A Uncharacterized protein 83.8 0.62 2.1E-05 51.9 3.9 78 413-494 297-376 (394)
445 1pgv_A TMD-1, tropomodulin TMD 82.7 0.051 1.7E-06 54.7 -5.0 84 413-496 70-169 (197)
446 4gt6_A Cell surface protein; l 79.5 1.9 6.4E-05 47.9 5.8 58 432-492 283-342 (394)
447 4ann_A ESSB; membrane protein, 77.7 7.5 0.00026 39.2 9.0 115 667-817 43-158 (215)
448 4gt6_A Cell surface protein; l 76.3 1.5 5.2E-05 48.7 3.8 79 413-496 288-369 (394)
449 4h09_A Hypothetical leucine ri 74.8 1.9 6.6E-05 47.4 4.1 88 414-506 241-330 (379)
450 2ks1_B Epidermal growth factor 72.7 0.73 2.5E-05 34.1 -0.0 26 532-557 13-38 (44)
451 4fs7_A Uncharacterized protein 71.0 1.8 6.1E-05 48.1 2.7 72 413-489 320-393 (394)
452 3cxl_A N-chimerin; SH2, RHO-GA 69.4 0.55 1.9E-05 53.8 -2.1 59 618-679 147-214 (463)
453 4ano_A ESSB; membrane protein, 65.7 8.9 0.0003 38.9 6.2 114 667-817 48-163 (219)
454 2jwa_A Receptor tyrosine-prote 64.7 0.82 2.8E-05 33.7 -1.2 27 530-556 12-38 (44)
455 2l2t_A Receptor tyrosine-prote 58.7 1.9 6.7E-05 31.8 -0.1 26 532-557 12-37 (44)
456 2k1k_A Ephrin type-A receptor 31.3 10 0.00035 27.0 0.0 25 531-555 12-36 (38)
457 2w3j_A Carbohydrate binding mo 27.6 3.6E+02 0.012 24.8 10.2 91 80-175 38-133 (145)
458 1nrp_R Receptor based peptide 21.0 34 0.0012 21.1 0.9 16 200-215 6-21 (26)
459 1nro_R Receptor based peptide 20.1 38 0.0013 21.1 1.0 16 200-215 6-21 (27)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.8e-49 Score=437.66 Aligned_cols=259 Identities=26% Similarity=0.429 Sum_probs=207.5
Q ss_pred HHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
...+.++||+|+||.||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3456789999999999999875 4788999999877666778899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEE
Q 002336 688 YEYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 755 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~------------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vk 755 (935)
||||++|+|.++++... ...+++|.++++|+.|+|+||+|||+ ++|+||||||+||||++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEE
Confidence 99999999999997542 23469999999999999999999998 8999999999999999999999
Q ss_pred Eeeccccccccccc-cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHH
Q 002336 756 VSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 756 L~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
|+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..+. .
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~----~ 271 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAI----D 271 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHH----H
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHH----H
Confidence 99999998754332 222344569999999999999999999999999999999999 8999974322 1122 2
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
.+..+.... .+......+.+++.+||+.||++|||++||++.|+.+...
T Consensus 272 ~i~~g~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQGRELE---------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHcCCCCC---------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 232332111 1222234688999999999999999999999999987653
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-49 Score=435.15 Aligned_cols=261 Identities=28% Similarity=0.446 Sum_probs=214.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
...+.+.+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 344567889999999999999874 47789999998776667788999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC----------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEE
Q 002336 686 LVYEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 755 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vk 755 (935)
+|||||++|+|.++|+... ....++|.++++++.|+|+||+|||+ ++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997531 34579999999999999999999998 8999999999999999999999
Q ss_pred Eeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHH
Q 002336 756 VSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 756 L~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
|+|||+++........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..+ ..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~----~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEV----IE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHH----HH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH----HH
Confidence 9999999875443322 2233458999999999999999999999999999999999 8999974322 112 22
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
.+..+.... .+...+..+.+++.+||+.||++|||++||++.|+++...
T Consensus 242 ~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 233333211 1222334688999999999999999999999999987653
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-49 Score=435.30 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=213.8
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeecc
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 681 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~ 681 (935)
++...+.+|.++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.++
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~ 101 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 101 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence 444456678899999999999999873 467899999975433 3357899999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 748 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl 748 (935)
+..++|||||++|+|.++|.... ....++|.++++++.|||+||+|||+ ++|+||||||+||||
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEE
Confidence 99999999999999999996432 12468999999999999999999998 899999999999999
Q ss_pred cCCCcEEEeeccccccccccc-cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchh
Q 002336 749 DINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 826 (935)
Q Consensus 749 d~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~ 826 (935)
++++.+||+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||.+... ..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~ 255 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QD 255 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HH
Confidence 999999999999998754332 222344568999999999999999999999999999999999 8999974322 12
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhh
Q 002336 827 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 889 (935)
Q Consensus 827 l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~ 889 (935)
+. ..+..+.... .+...+..+.+++.+||+.||++||||+||++.|+...
T Consensus 256 ~~----~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 256 VV----EMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HH----HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HH----HHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 22 2333333221 12233446889999999999999999999999998653
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=420.24 Aligned_cols=257 Identities=31% Similarity=0.505 Sum_probs=202.2
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
..+.++||+|+||+||+|++++ .||||+++.. .....+.|.+|+++|++++|||||+++|++.+ +..++|||||+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~ 114 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE 114 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred eEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence 4578899999999999999763 5999998643 33456789999999999999999999999865 46899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc-cc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 771 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~-~~ 771 (935)
+|+|.++|+.. ...+++.+++.|+.|||+||+|||+ ++|+||||||+||||++++.+||+|||+|+...... ..
T Consensus 115 gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 115 GSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp SCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 99999999743 4579999999999999999999998 899999999999999999999999999998754322 22
Q ss_pred eeecccCCccccCCCCCC---CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 772 ISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~---~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
......||+.|||||++. ...++.++|||||||++|||+||+.||...... ..+...+..+.. .|.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~----~p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA----SPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCC----CCCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCC----CCCc
Confidence 233457999999999885 346899999999999999999999999743221 112222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
...+...+..+.+++.+||+.+|++|||++||++.|+.+..
T Consensus 260 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 260 -SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp -TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred -ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11222334578899999999999999999999999987654
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.6e-47 Score=420.56 Aligned_cols=261 Identities=24% Similarity=0.263 Sum_probs=209.2
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
+.+.++||+|+||.||+|+++ +|+.||||+++... ...+|+.+|+.++|||||++++++.+++..|||||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 445678999999999999986 68999999986432 234799999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC-cEEEeeccccccccccccc-
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 771 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~-~vkL~DFGla~~~~~~~~~- 771 (935)
|+|.++++. .+.+++.++..++.||+.||+|||+ ++|+||||||+||||+.++ ++||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999974 4579999999999999999999998 8999999999999999987 6999999999876543211
Q ss_pred ---eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 772 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 772 ---~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
......||+.|||||++.+..++.++|||||||++|||++|+.||........ ... +..+... +
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~~----i~~~~~~------~ 275 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CLK----IASEPPP------I 275 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HHH----HHHSCCG------G
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HHH----HHcCCCC------c
Confidence 12234699999999999999999999999999999999999999975433221 111 1111110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCCCCCcc
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 900 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~~ 900 (935)
...+......+.+++.+||+.||++|||++|+++.|...+.....-..+|-
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 011222334688999999999999999999999999887766555445543
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-46 Score=419.74 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=205.9
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
|++.++||+|+||.||+|.++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||++
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 566788999999999999986 6999999999765455567789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccccee
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 773 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 773 (935)
|+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+........ .
T Consensus 156 g~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 227 (346)
T 4fih_A 156 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 227 (346)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-B
T ss_pred CcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-c
Confidence 999999973 459999999999999999999998 99999999999999999999999999999876544332 3
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 853 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~ 853 (935)
....||+.|||||++.+..|+.++||||+||++|||++|+.||...... ... ..+..+.... +. ..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~----~~i~~~~~~~-----~~--~~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAM----KMIRDNLPPR-----LK--NL 293 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH----HHHHHSSCCC-----CS--CG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHH----HHHHcCCCCC-----CC--cc
Confidence 3457999999999999999999999999999999999999999743221 111 1222221111 10 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 854 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 854 ~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
......+.+++.+||+.||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122346889999999999999999999875
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1e-46 Score=420.34 Aligned_cols=249 Identities=26% Similarity=0.376 Sum_probs=201.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.|++.+.||+|+||+||+|++. +|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 3677899999999999999875 6999999998653 233457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
|+||+|.+++... ....+++.+++.++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+++.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999743 34567899999999999999999998 9999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......||+.|||||++.+..++.++|||||||++|||++|+.||..... .+.... +..+.... +..
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~-i~~~~~~~-----~~~ 247 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLK-IISGSFPP-----VSL 247 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH-HHHTCCCC-----CCT
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHH-HHcCCCCC-----CCc
Confidence 12345699999999999999999999999999999999999999974332 111222 22222211 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ....+.+++.+||+.||++|||++|+++
T Consensus 248 ~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 H----YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2 2236889999999999999999999976
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-46 Score=406.35 Aligned_cols=244 Identities=28% Similarity=0.422 Sum_probs=196.7
Q ss_pred hhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeec----cceEEEEE
Q 002336 616 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 688 (935)
Q Consensus 616 ~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~----~~~~~lV~ 688 (935)
++.++||+|+||.||+|.+. +++.||+|++... .....+.|.+|+++|++++|||||++++++.+ +...+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999876 6889999998643 23345679999999999999999999999864 45689999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCcccc-CCCcEEEeeccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQA 765 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld-~~~~vkL~DFGla~~~ 765 (935)
|||++|+|.+++.. ...+++..+..++.||+.||+|||+ ++ |+||||||+||||+ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999974 4679999999999999999999997 66 99999999999997 4799999999999864
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
... ......||+.|||||++.+ .++.++|||||||++|||+||+.||...... .. +...+..+.....++
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--~~----~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQ----IYRRVTSGVKPASFD 252 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HH----HHHHHTTTCCCGGGG
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--HH----HHHHHHcCCCCCCCC
Confidence 332 2334579999999998875 5999999999999999999999999632211 11 222333332211111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+ ..+ ..+.+++.+||+.||++|||++|+++
T Consensus 253 ~----~~~----~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 K----VAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c----cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 112 25789999999999999999999875
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-46 Score=412.60 Aligned_cols=267 Identities=25% Similarity=0.362 Sum_probs=201.5
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc----eEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~----~~~lV~E~ 690 (935)
+.+.++||+|+||+||+|+++ |+.||||++.... .....+..|+..+.+++|||||+++|+|.+++ ..+|||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 345789999999999999985 8999999986532 22223345666667889999999999997653 57999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----CCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-----NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~-----~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
|++|+|.++|+. .++++..+++++.|+++||+|||+.+ .++|+||||||+||||+.++++||+|||+++..
T Consensus 83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999974 46899999999999999999999721 249999999999999999999999999999876
Q ss_pred cccccc---eeecccCCccccCCCCCCCC------CCCchhHHHHHHHHHHHHHhCCCCCCccCcccc--------hhHH
Q 002336 766 EEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIV 828 (935)
Q Consensus 766 ~~~~~~---~~~~~~gt~~y~APE~l~~~------~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~--------~~l~ 828 (935)
...... ......||+.|||||++.+. .++.++|||||||++|||+||+.|+........ ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12235699999999998654 467899999999999999999887753322110 0111
Q ss_pred HHHHHhhhcCCeeecccccccCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 829 HWARSMIKKGDVISIVDPVLIGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 829 ~~~~~~i~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
+.+...+..+. ++|.+.... ..+....+.+++.+||+.||++||||+||++.|+++...
T Consensus 239 ~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22222222211 222222211 235567889999999999999999999999999987654
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-46 Score=421.77 Aligned_cols=266 Identities=26% Similarity=0.401 Sum_probs=214.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECC------CcEEEEEEccCcch-hhhHHHHHHHHHHHhcCC-Ccccccceeeec
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEE 680 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~~------g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~H-pnIv~l~g~~~~ 680 (935)
|+....+++.+.||+|+||.||+|.+.. ++.||||++..... ...+.|.+|+++|.+++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3444567788999999999999998752 36899999976543 345779999999999965 999999999966
Q ss_pred -cceEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCc
Q 002336 681 -EHQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 746 (935)
Q Consensus 681 -~~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NI 746 (935)
++..++|||||++|+|.++|+... ....+++.+++.++.|||+||+|||+ ++|+||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccce
Confidence 456899999999999999997532 13458999999999999999999998 8999999999999
Q ss_pred cccCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccc
Q 002336 747 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 824 (935)
Q Consensus 747 Lld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~ 824 (935)
|+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+.....
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999876544332 2334568999999999999999999999999999999998 999997433221
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 825 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 825 ~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.+...+.++..... +......+.+++.+||+.||++|||++||++.|+++++..
T Consensus 296 -----~~~~~i~~g~~~~~---------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 296 -----EFCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp -----HHHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 12233333322111 1122346889999999999999999999999999987644
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-45 Score=421.47 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=206.1
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
|++.++||+|+||.||+|.+. +|+.||||++........+.+.+|+.+|+.++|||||++++++.+++..|||||||+|
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 566789999999999999986 6999999999765555567899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccccee
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 773 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 773 (935)
|+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+||||+.+|.+||+|||+|+........ .
T Consensus 233 G~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 304 (423)
T 4fie_A 233 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 304 (423)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-B
T ss_pred CcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-c
Confidence 999999973 459999999999999999999998 99999999999999999999999999999876544322 3
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 853 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~ 853 (935)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||...... ... ..+..+.... +. ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~----~~i~~~~~~~-----~~--~~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAM----KMIRDNLPPR-----LK--NL 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH----HHHHHSCCCC-----CS--CT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHH----HHHHcCCCCC-----Cc--cc
Confidence 3457999999999999999999999999999999999999999743221 111 1222221111 11 01
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 854 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 854 ~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
......+.+++.+||+.||++|||++|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112236789999999999999999999875
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-46 Score=411.51 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=205.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 3778999999999999999876 69999999986532 2234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|++||+|.+++.. .+.+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999973 4679999999999999999999998 999999999999999999999999999998765332
Q ss_pred -cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 770 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 770 -~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.......+||+.|||||++.+..++.++||||+||++|||++|+.||...+.. .+ ...+..+.+ .+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~----~~~i~~~~~------~~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LI----FAKIIKLEY------DF 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH----HHHHHHTCC------CC
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HH----HHHHHcCCC------CC
Confidence 22334567999999999999999999999999999999999999999743321 11 122222222 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 882 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~ 882 (935)
.... ...+.+++.+||+.||++|||++|+.
T Consensus 254 p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKF----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred Cccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1122 23678999999999999999999863
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-45 Score=397.23 Aligned_cols=244 Identities=25% Similarity=0.373 Sum_probs=189.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|++.+.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3677899999999999999875 69999999986542 2234679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+ +|+|.+.+.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||+++++++||+|||+|+...+..
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 6899999874 4679999999999999999999998 999999999999999999999999999998754432
Q ss_pred cceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
. .....||+.|||||++.+..+ +.++||||+||++|||++|+.||...... .+ .+.+..+.. .+
T Consensus 167 ~--~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---~~----~~~i~~~~~------~~ 231 (275)
T 3hyh_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---VL----FKNISNGVY------TL 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH----HHHHHHTCC------CC
T ss_pred c--cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---HH----HHHHHcCCC------CC
Confidence 2 234579999999999988765 58999999999999999999999743221 11 122222221 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.... ...+.+++.+||+.||++|||++|+++
T Consensus 232 p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCC----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1112 236789999999999999999999976
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-45 Score=403.64 Aligned_cols=246 Identities=26% Similarity=0.336 Sum_probs=194.6
Q ss_pred HHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
.|++.+.||+|+||+||+|+.. .++.||||+++.... .....+.+|+++|++++|||||++++++.+++..|+|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4678899999999999999863 478999999875422 2335688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
||||+||+|.+++.. .+.+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999974 4679999999999999999999998 9999999999999999999999999999986543
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
... ......||+.|||||++.+..++.++||||+||++|||++|+.||.+.+.. .+ . ..+.++.. .
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~---~-~~i~~~~~------~ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---ET---M-TMILKAKL------G 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---H-HHHHHCCC------C
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---HH---H-HHHHcCCC------C
Confidence 322 223457999999999999999999999999999999999999999743321 11 1 12222221 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 883 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~ev~~ 883 (935)
+ +......+.+++.+||+.||++|||+ +|+++
T Consensus 245 ~----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 M----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 11122367899999999999999984 56653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.4e-44 Score=392.15 Aligned_cols=249 Identities=23% Similarity=0.356 Sum_probs=187.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccc---------
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--------- 682 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~--------- 682 (935)
.|++.+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3667899999999999999876 689999999865433 34567999999999999999999999986543
Q ss_pred ---eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeec
Q 002336 683 ---QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 759 (935)
Q Consensus 683 ---~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DF 759 (935)
..|+|||||++|+|.+++.........++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999854333445677789999999999999998 89999999999999999999999999
Q ss_pred cccccccccccc-----------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHH
Q 002336 760 GLSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 828 (935)
Q Consensus 760 Gla~~~~~~~~~-----------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~ 828 (935)
|+|+........ ......||+.|||||++.+..++.++|||||||++|||++ ||.... +..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHH
Confidence 999876543211 1123469999999999999999999999999999999996 775211 111
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 829 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 829 ~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
..+ ..+........ .......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11222221111 1122235678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.2e-42 Score=380.55 Aligned_cols=276 Identities=41% Similarity=0.718 Sum_probs=242.3
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 694 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~g 694 (935)
|++.+.||+|+||.||+|.+++|+.||||++........+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 120 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence 44578899999999999999889999999988766666788999999999999999999999999999999999999999
Q ss_pred CHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc-cce
Q 002336 695 TLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-THI 772 (935)
Q Consensus 695 sL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~-~~~ 772 (935)
+|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9999987543 23468999999999999999999998 899999999999999999999999999998654322 222
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||.............|.......+.+...+++.+....
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 23345899999999998888999999999999999999999999866555666778888777778888888888887778
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
+.+....+.+++.+||+.||++|||++||++.|+.++...+
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 88889999999999999999999999999999999887654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=390.56 Aligned_cols=260 Identities=19% Similarity=0.311 Sum_probs=198.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeec------cceE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~------~~~~ 684 (935)
.|++.+.||+|+||+||+|.+. +|+.||||+++... ....+.+.+|+++|+.++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 3677899999999999999876 79999999996542 2345678899999999999999999998753 4678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
|+|||||+ |+|.+++. ..+.+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999996 68999987 35679999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccc---cceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 765 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 765 ~~~~~---~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+.. ..+........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l---~~I~~~~g~p~- 283 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL---QLIMMVLGTPS- 283 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH---HHHHHHHCCCC-
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH---HHHHHhcCCCC-
Confidence 54321 1223446799999999987764 5799999999999999999999999854432211 11111110000
Q ss_pred eeccc-----------ccccCCC--C-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 841 ISIVD-----------PVLIGNV--K-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 841 ~~~~d-----------~~l~~~~--~-----~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..... ..+.... + +.....+.+++.+||+.||++|||++|+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 0000000 0 0112367899999999999999999998763
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-41 Score=378.57 Aligned_cols=287 Identities=39% Similarity=0.705 Sum_probs=242.8
Q ss_pred CChhhHHHHHH--hhcccccccccEEEEEEEECCCcEEEEEEccCcchh-hhHHHHHHHHHHHhcCCCcccccceeeecc
Q 002336 605 IPLPELEEATN--NFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEE 681 (935)
Q Consensus 605 ~~~~~l~~~~~--~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~ 681 (935)
+++.++..... ++.+.||+|+||.||+|.+.+|+.||||++...... ....+.+|+++++.++||||+++++++...
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 44556655444 447899999999999999888999999998764332 234789999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 760 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFG 760 (935)
+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 179 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence 99999999999999999998653 34459999999999999999999998322399999999999999999999999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCc--ccchhHHHHHHHhhhcC
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--GAELNIVHWARSMIKKG 838 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~--~~~~~l~~~~~~~i~~~ 838 (935)
+++..............||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .......+|+.......
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch
Confidence 9987765544445556699999999999888899999999999999999999999973322 23446778888888888
Q ss_pred CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 839 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 839 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
......+..+....+......+.+++.+||+.+|++|||++||+++|++....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 88888888888888888899999999999999999999999999999875443
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-40 Score=375.68 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=166.5
Q ss_pred HHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.|++.+.||+|+||+||+|+.+ .++.||+|++.... ...++.+|+++|+.+ +|||||++++++.+.++.++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 3677889999999999999764 46789999986542 345688999999998 6999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC-CcEEEeeccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 767 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~-~~vkL~DFGla~~~~~ 767 (935)
||+++|+|.+++. .+++.++..++.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999984 38899999999999999999998 999999999999999876 7999999999976543
Q ss_pred cccc---------------------------eeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCc
Q 002336 768 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSV 818 (935)
Q Consensus 768 ~~~~---------------------------~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~ 818 (935)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2110 11234699999999988764 589999999999999999999999963
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-40 Score=397.59 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=207.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||+|.++ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+....++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 3677899999999999999886 699999999977666667789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC--CcEEEeecccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~--~~vkL~DFGla~~~~~~~~ 770 (935)
||+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.......
T Consensus 238 gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999864 24569999999999999999999998 999999999999999854 8999999999988754332
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|||||++.+..++.++||||+||++|||++|+.||.+....+ .. ..+..+... +.+....
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~~----~~i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TL----RNVKSCDWN--MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HH----HHHHTTCCC--CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HH----HHHHhCCCC--CCccccc
Confidence 234569999999999999999999999999999999999999997443211 11 122222110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ....+.+++.+||+.||++|||++|+++
T Consensus 382 ~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 G----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp T----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 2236789999999999999999999987
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.4e-40 Score=391.27 Aligned_cols=247 Identities=22% Similarity=0.272 Sum_probs=196.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHH---HHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVT---EVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~---E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
|++.+.||+|+||.||+|+++ +|+.||||++..... .....+.+ ++.+++.++|||||++++++.+.+.+|+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 566789999999999999886 699999999864321 11223333 45666677899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||++||+|.++|.. .+.+++..+..++.||+.||+|||+ ++|+||||||+||||+.+|++||+|||+|+....
T Consensus 271 mEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp ECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999974 4679999999999999999999998 9999999999999999999999999999987654
Q ss_pred cccceeecccCCccccCCCCCC-CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 846 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~-~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~ 846 (935)
.. ....+||+.|||||++. +..++.++|+||+||++|||++|+.||......+...+. ..+.....
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~----~~i~~~~~------ 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLTMAV------ 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH----HHHHHCCC------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhhcCCCC------
Confidence 32 23457999999999986 457999999999999999999999999744332221111 12211111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002336 847 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVLA 884 (935)
Q Consensus 847 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~ev~~~ 884 (935)
.+ +......+.+++.+||+.||++|++ ++||.++
T Consensus 412 ~~----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 EL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CC----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 11 1122236789999999999999998 6777553
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=363.86 Aligned_cols=259 Identities=25% Similarity=0.387 Sum_probs=212.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.+.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 90 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence 4566789999999999999886 689999999877666677889999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+|+|.+++... ...+++.+++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 91 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 91 GGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 99999999753 4569999999999999999999998 899999999999999999999999999998754332211
Q ss_pred -------------eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc---hhHHHHHHHhhh
Q 002336 773 -------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMIK 836 (935)
Q Consensus 773 -------------~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~---~~l~~~~~~~i~ 836 (935)
.....||+.|+|||.+.+..++.++||||||+++|||++|..|+........ ........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---- 241 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD---- 241 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH----
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc----
Confidence 1134689999999999999999999999999999999999999864322211 11111111
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 837 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 837 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
....... ...+.+++.+||+.||++|||++|+++.|+++......
T Consensus 242 ---------~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 242 ---------RYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp ---------HTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ---------ccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1111111 23578999999999999999999999999988765543
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2e-39 Score=358.90 Aligned_cols=261 Identities=34% Similarity=0.509 Sum_probs=202.7
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
...+++.+.||+|+||.||+|++. |+.||||++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 345677899999999999999885 8899999986543 3345679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|+++|+|.+++........+++..++.++.|+++||+|||+ ++ |+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 99999999999854323348999999999999999999998 78 99999999999999999999999999976543
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+ .......
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~---~~~~~~~------ 258 (309)
T 3p86_A 192 TFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAV---GFKCKRL------ 258 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHH---HHSCCCC------
T ss_pred ccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH---HhcCCCC------
Confidence 322 123356899999999999999999999999999999999999999743221 111111 1111110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
..+......+.+++.+||+.+|++|||++|+++.|+.++...
T Consensus 259 ---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 ---EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 111222336889999999999999999999999999887643
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-38 Score=349.28 Aligned_cols=279 Identities=37% Similarity=0.589 Sum_probs=224.7
Q ss_pred cCChhhHHHHHHhhc--------ccccccccEEEEEEEECCCcEEEEEEccCcc----hhhhHHHHHHHHHHHhcCCCcc
Q 002336 604 FIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNL 671 (935)
Q Consensus 604 ~~~~~~l~~~~~~~~--------~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~----~~~~~~~~~E~~iL~~L~HpnI 671 (935)
.+.+.++.+++.+|. +.||+|+||.||+|.+. ++.||+|++.... ....+.+.+|++++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 456788888888874 56999999999999874 8999999986532 2345679999999999999999
Q ss_pred cccceeeeccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC
Q 002336 672 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 751 (935)
Q Consensus 672 v~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~ 751 (935)
+++++++.+.+..++||||+++++|.+++........+++..++.++.|+++||+|||+ ++|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCC
Confidence 99999999999999999999999999998755445679999999999999999999998 899999999999999999
Q ss_pred CcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHH
Q 002336 752 MRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 830 (935)
Q Consensus 752 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~ 830 (935)
+.+||+|||++......... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||........ ...+
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~ 246 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 246 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHHH
Confidence 99999999999875443222 2233468999999998765 578999999999999999999999975433221 1122
Q ss_pred HHHhhh-cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 831 ARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 831 ~~~~i~-~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
...... ...+...+++.+ ...+......+.+++.+||+.+|++||+++||++.|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222111 112333344433 23456677789999999999999999999999999998753
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.4e-39 Score=351.75 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=204.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 3566789999999999999864 789999999876555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999974 358999999999999999999998 89999999999999999999999999998876543322
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ........+.. .. ..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~~~~~~~-~~-------~~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNGTP-EL-------QN 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHHCSC-CC-------SC
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCC-CC-------CC
Confidence 234569999999999998899999999999999999999999997432211 11111111111 00 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1222346889999999999999999999975
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.8e-39 Score=363.82 Aligned_cols=264 Identities=24% Similarity=0.454 Sum_probs=212.9
Q ss_pred HHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeecc
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 681 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~ 681 (935)
...+.+.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+.+++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 345667889999999999999863 356799999976533 3456899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 748 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl 748 (935)
+..++||||+++|+|.+++.... ....+++.+++.++.||++||+|||+ ++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999997542 12458999999999999999999998 899999999999999
Q ss_pred cCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchh
Q 002336 749 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 826 (935)
Q Consensus 749 d~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~ 826 (935)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~ 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---E 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence 99999999999999865443221 1223346789999999988899999999999999999999 99999744322 1
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 827 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 827 l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
+.. .+..+... ..+......+.+++.+||+.+|++||+++|+++.|++++.....
T Consensus 314 ~~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 314 LFK----LLKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHH----HHHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHH----HHhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 221 22222111 11122234688999999999999999999999999998876543
No 27
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.4e-39 Score=349.70 Aligned_cols=259 Identities=27% Similarity=0.444 Sum_probs=211.7
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
...+++.+.||+|+||.||+|.++++..||+|++..... ..+++.+|++++++++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 345677899999999999999999888999999875432 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++++|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 86 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp TTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred CCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 999999998742 3468999999999999999999998 89999999999999999999999999999876554433
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||....... ... .+..+.. ...
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~-~~~~~~~--~~~----- 226 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVL-KVSQGHR--LYR----- 226 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHH-HHHTTCC--CCC-----
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHH-HHHcCCC--CCC-----
Confidence 3334456778999999988889999999999999999999 999997332211 111 1111111 001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
+......+.+++.+||+.+|++|||++|+++.|+.+...+
T Consensus 227 --~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 --PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1111236889999999999999999999999999887644
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=359.67 Aligned_cols=264 Identities=27% Similarity=0.499 Sum_probs=211.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccce
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~ 683 (935)
++....+++.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 344556777899999999999999985 35569999997643 3445789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 684 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999743 4569999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 764 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 764 ~~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... ..+..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~----~~~~~~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVI----SSVEEGYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHH----HHHHTTCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHH----HHHHcCCC
Confidence 76543222 1222346778999999988889999999999999999999 99999733221 111 11222211
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
. ..+......+.+++.+||+.+|++||+++||++.|+.+....+
T Consensus 273 ~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 L---------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred C---------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0 1112223468899999999999999999999999999887544
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-39 Score=347.99 Aligned_cols=256 Identities=29% Similarity=0.461 Sum_probs=210.8
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
..+++.+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+....++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 34667889999999999999998899999999875432 34679999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 99999999743 4568999999999999999999998 899999999999999999999999999998765433333
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 851 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~ 851 (935)
.....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .... .+..+.. ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~----~~~~~~~-----~~~--- 228 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE----DISTGFR-----LYK--- 228 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCC-----CCC---
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHH----HHhcCcc-----CCC---
Confidence 334456788999999988889999999999999999999 99999743221 1111 1221110 011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 852 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 852 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
+......+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 229 -~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 -PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 11123368899999999999999999999999998765
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-39 Score=360.51 Aligned_cols=264 Identities=26% Similarity=0.353 Sum_probs=206.5
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc----eEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~----~~~lV~E 689 (935)
.+++.+.||+|+||.||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++|||
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 4567889999999999999987 8999999986542 33455667999999999999999999997744 4699999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC----------ceEecCCCCCCccccCCCcEEEeec
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSDF 759 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~----------~ivH~DLkp~NILld~~~~vkL~DF 759 (935)
|+++|+|.++++. ..+++..++.++.|+++||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 103 ~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 103 FHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp CCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999974 358999999999999999999997 6 9999999999999999999999999
Q ss_pred cccccccccccc-eeecccCCccccCCCCCCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccch--------
Q 002336 760 GLSRQAEEDLTH-ISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL-------- 825 (935)
Q Consensus 760 Gla~~~~~~~~~-~~~~~~gt~~y~APE~l~~-----~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~-------- 825 (935)
|+++........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999775443222 1223468999999999876 35567899999999999999999999754332111
Q ss_pred --hHHHHHHHhhhcCCeeecccccccCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 826 --NIVHWARSMIKKGDVISIVDPVLIGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 826 --~l~~~~~~~i~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
....+...... .... +.+.... .......+.+++.+||+.||++|||++||++.|+++...
T Consensus 256 ~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVH-KKKR----PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTT-SCCC----CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhc-ccCC----CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111111 1111 1111111 223456799999999999999999999999999988764
No 31
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-38 Score=350.19 Aligned_cols=264 Identities=27% Similarity=0.409 Sum_probs=208.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
..|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 34667899999999999999875 6899999998543 2334567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++++|.+++.. ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999974 4579999999999999999999998 89999999999999999999999999999876544
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.........||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... ......+... .... ..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~-~~~~-~~-- 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDS-VPNV-TT-- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSC-CCCH-HH--
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhcc-CCCc-ch--
Confidence 333334456899999999999888999999999999999999999999743221 1111222211 1111 01
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHhhhhhhccC
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~ev~~~L~~~~~~~~~ 894 (935)
......+..+.+++.+|++.+|++|| +++++.+.|+.+......
T Consensus 235 --~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 235 --DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp --HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred --hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 11122234788999999999999999 999999999987765443
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.4e-38 Score=349.31 Aligned_cols=257 Identities=24% Similarity=0.392 Sum_probs=208.9
Q ss_pred CChhhHHHHHH------------hhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcc
Q 002336 605 IPLPELEEATN------------NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL 671 (935)
Q Consensus 605 ~~~~~l~~~~~------------~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnI 671 (935)
++..++.+++. +..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 104 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc
Confidence 34556666554 33568999999999999987 799999999876555556789999999999999999
Q ss_pred cccceeeeccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC
Q 002336 672 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 751 (935)
Q Consensus 672 v~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~ 751 (935)
+++++++...+..++||||+++++|.+++. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.+
T Consensus 105 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred ceEEEEEEECCEEEEEEecCCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999986 3469999999999999999999998 899999999999999999
Q ss_pred CcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHH
Q 002336 752 MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA 831 (935)
Q Consensus 752 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~ 831 (935)
+.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ....
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~~-- 251 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMK-- 251 (321)
T ss_dssp CCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH--
T ss_pred CcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH--
Confidence 99999999999876543222 23456899999999999999999999999999999999999999743221 1111
Q ss_pred HHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 832 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 832 ~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.+.......... .......+.+++.+||+.||++|||++|+++
T Consensus 252 --~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 252 --RLRDSPPPKLKN-------SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp --HHHHSSCCCCTT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHhcCCCCCcCc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111100 1112236889999999999999999999976
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.8e-39 Score=348.06 Aligned_cols=259 Identities=27% Similarity=0.450 Sum_probs=209.6
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
...+++.+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 345677899999999999999999888999999975432 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 102 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 102 ANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp TTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 999999999742 3569999999999999999999998 89999999999999999999999999999876543322
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ... ..+..+.. ..
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~----~~~~~~~~-----~~--- 241 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETA----EHIAQGLR-----LY--- 241 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHH----HHHHTTCC-----CC---
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHH----HHHhcccC-----CC---
Confidence 2333456788999999988889999999999999999998 99999743321 111 11221110 00
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.+......+.+++.+||+.+|++|||++|+++.|+++...+
T Consensus 242 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 242 -RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp -CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 11111246889999999999999999999999999887654
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.9e-40 Score=359.80 Aligned_cols=267 Identities=28% Similarity=0.451 Sum_probs=208.7
Q ss_pred HHHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec--cce
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQ 683 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~--~~~ 683 (935)
....+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 345567789999999999999985 2688999999987766667889999999999999999999999854 355
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 684 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 89999999999999999753 3458999999999999999999998 899999999999999999999999999998
Q ss_pred ccccccc--ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcc---------cchhHHHHHH
Q 002336 764 QAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWAR 832 (935)
Q Consensus 764 ~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~---------~~~~l~~~~~ 832 (935)
....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7644322 1222344677899999998888999999999999999999999998733211 0011111222
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 833 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 833 ~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
..+..+... ..+......+.+++.+||+.+|++|||++|+++.|+++...
T Consensus 243 ~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 222222111 11222334788999999999999999999999999988653
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=359.43 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=195.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 90 (347)
T 3zgw_A 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90 (347)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 4567889999999999999874 79999999986543 234567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.........
T Consensus 91 ~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 91 PGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 99999999873 4569999999999999999999998 89999999999999999999999999998876544333
Q ss_pred eeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... ... ..+..+.. .+
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~-~~i~~~~~------~~-- 229 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------ALY-KKIMRGKY------DV-- 229 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHTCC------CC--
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHH-HHHHcCCC------CC--
Confidence 3344569999999999987765 89999999999999999999999743221 111 12222221 01
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+......+.+++.+||+.||++|||++|+++.
T Consensus 230 --p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 --PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11122357889999999999999999999863
No 36
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.6e-38 Score=345.95 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=199.7
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHh--cCCCcccccceeeec----cceEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~--L~HpnIv~l~g~~~~----~~~~~lV 687 (935)
.+++.+.||+|+||.||+|++ +++.||||++... ..+.+..|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 456788999999999999998 4999999998643 33456667777766 789999999998644 3568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCceEecCCCCCCccccCCCcEEEeec
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 759 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------s~~~~~ivH~DLkp~NILld~~~~vkL~DF 759 (935)
|||+++|+|.++++ ...+++..+++++.|+++||+||| + ++|+||||||+|||++.++.+||+||
T Consensus 85 ~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp ECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999996 346999999999999999999999 6 89999999999999999999999999
Q ss_pred cccccccccccce---eecccCCccccCCCCCCCC------CCCchhHHHHHHHHHHHHHhC----------CCCCCccC
Q 002336 760 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 820 (935)
Q Consensus 760 Gla~~~~~~~~~~---~~~~~gt~~y~APE~l~~~------~~s~ksDVwS~Gvil~eLltG----------~~Pf~~~~ 820 (935)
|+++......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654433221 2234689999999998776 455799999999999999999 78876332
Q ss_pred cccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhh
Q 002336 821 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 888 (935)
Q Consensus 821 ~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~ 888 (935)
... ..................... ...+......+.+++.+||+.||++|||++||++.|+++
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PND-PSFEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSS-CCHHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC-cchhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 221 111111111111111111111 112234567899999999999999999999999999875
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-38 Score=354.80 Aligned_cols=245 Identities=26% Similarity=0.418 Sum_probs=202.3
Q ss_pred HhhcccccccccEEEEEEEE-CCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++.+.||+|+||.||+|.+ .+|+.||||++... .....+.+.+|+++|+.++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 56678999999999999998 47999999998654 2334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++|+|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 97 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 169 (328)
T 3fe3_A 97 SGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK- 169 (328)
T ss_dssp TTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG-
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc-
Confidence 99999999874 3568999999999999999999998 8999999999999999999999999999986543322
Q ss_pred eeecccCCccccCCCCCCCCCCC-chhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s-~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|+|||++.+..+. .++||||+||++|+|++|+.||...... + ....+..+...
T Consensus 170 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~-~~~~i~~~~~~--------- 232 (328)
T 3fe3_A 170 -LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------E-LRERVLRGKYR--------- 232 (328)
T ss_dssp -GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCCCC---------
T ss_pred -cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------H-HHHHHHhCCCC---------
Confidence 2345699999999998877664 8999999999999999999999744321 1 11222222110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 233 -~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 233 -IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111122367899999999999999999999763
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=361.46 Aligned_cols=273 Identities=24% Similarity=0.430 Sum_probs=217.4
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceee
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYC 678 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~ 678 (935)
++....+.+.+.||+|+||.||+|++. .++.||||++..... ...+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 344456777899999999999999863 246799999876533 3457899999999999 899999999999
Q ss_pred eccceEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCC
Q 002336 679 EEEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 745 (935)
Q Consensus 679 ~~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~N 745 (935)
...+..++||||+++|+|.+++..... ...+++..+++++.|+++||+|||+ ++|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 999999999999999999999975421 2469999999999999999999998 899999999999
Q ss_pred ccccCCCcEEEeecccccccccccc-ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCccc
Q 002336 746 ILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGA 823 (935)
Q Consensus 746 ILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~ 823 (935)
||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999987644322 12233457889999999998899999999999999999999 99999743321
Q ss_pred chhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCCCCCcc
Q 002336 824 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 900 (935)
Q Consensus 824 ~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~~ 900 (935)
.+ ...+..+.... .+......+.+++.+||+.+|++|||++||++.|+++............
T Consensus 301 --~~----~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 301 --EL----FKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp --HH----HHHHHTTCCCC---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred --HH----HHHHHcCCCCC---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 11 12222222111 1112233688999999999999999999999999999987766655443
No 39
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3e-38 Score=351.76 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=199.7
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 566789999999999999876 789999999864432 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc-cc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 771 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~-~~ 771 (935)
+|+|.+++. ....+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 89 ~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 89 GGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp TEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred CCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999997 35679999999999999999999998 899999999999999999999999999998654322 12
Q ss_pred eeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...... ......|... ... ..+
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~----~~~---~~~---- 230 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKEK----KTY---LNP---- 230 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-SHHHHHHHTT----CTT---STT----
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHHhcc----ccc---CCc----
Confidence 2234568999999999877665 78999999999999999999999743322 1222222111 000 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.......+.+++.+||+.||++|||++|+++.
T Consensus 231 --~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 --WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01122367899999999999999999998764
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-39 Score=366.51 Aligned_cols=258 Identities=29% Similarity=0.444 Sum_probs=209.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
..+.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|+++|++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 34567889999999999999987 789999999875432 3446789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++... +..+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 194 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 194 VQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 9999999999742 3468999999999999999999998 8999999999999999999999999999986543221
Q ss_pred cee-ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 771 HIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 771 ~~~-~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...... . +...+..+....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~----~~~~~~~~~~~~------ 335 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---Q----TREFVEKGGRLP------ 335 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---H----HHHHHHTTCCCC------
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---H----HHHHHHcCCCCC------
Confidence 111 12235678999999988889999999999999999998 99999743221 1 122222222111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
.+...+..+.+++.+||+.+|++|||+++|++.|+++...
T Consensus 336 ---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 ---CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1112234688999999999999999999999999987653
No 41
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.5e-39 Score=373.99 Aligned_cols=259 Identities=24% Similarity=0.429 Sum_probs=210.2
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
...+++.+.||+|+||.||+|.+++++.||||+++... ...+.|.+|+++|++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 34466788999999999999999989999999997543 34678999999999999999999999987 56789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++|+|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 265 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp TTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 999999999743 22358899999999999999999998 89999999999999999999999999999876443222
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......++..|+|||.+....++.++||||||+++|||++ |+.||...... ...+ .+..+...
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~--------- 404 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIR----ALERGYRM--------- 404 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH----HHHHTCCC---------
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC---------
Confidence 2233346788999999988889999999999999999999 99999743221 1222 12222110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
..+......+.+++.+||+.+|++|||+++|++.|+++....
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 011222346889999999999999999999999999876543
No 42
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-37 Score=340.47 Aligned_cols=263 Identities=16% Similarity=0.193 Sum_probs=211.7
Q ss_pred HHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|.. .+|+.||||++... ...+.+.+|+.+++.+ +|+|++++++++.+....++||||+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 456778999999999999986 47899999998643 2345788999999999 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc-----EEEeecccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 766 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~-----vkL~DFGla~~~~ 766 (935)
+++|.+++... +..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++. +||+|||+++...
T Consensus 89 -~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 -GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred -CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999753 4469999999999999999999997 89999999999999987776 9999999998765
Q ss_pred ccccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 767 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 767 ~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 43221 123456899999999999999999999999999999999999999854433322222222221111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.. +... ....+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 243 ~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 RE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 11 1111 22468899999999999999999999999999876543
No 43
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=343.37 Aligned_cols=269 Identities=22% Similarity=0.318 Sum_probs=211.4
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccc--eEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~--~~~lV~E~ 690 (935)
|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 556789999999999999887 589999999875432 33567889999999999999999999987655 77999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc----cCCCcEEEeecccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl----d~~~~vkL~DFGla~~~~ 766 (935)
+++++|.+++........+++..++.++.|+++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999865444559999999999999999999998 899999999999999 788889999999998765
Q ss_pred ccccceeecccCCccccCCCCCC--------CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC
Q 002336 767 EDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 838 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~--------~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~ 838 (935)
.... .....||+.|+|||++. +..++.++||||||+++|||++|+.||........ ..+.+...+...
T Consensus 168 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 243 (319)
T 4euu_A 168 DDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGK 243 (319)
T ss_dssp TTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHC
T ss_pred CCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCC
Confidence 4332 22345899999999874 57889999999999999999999999964332211 111122222111
Q ss_pred ---Ceeecc-----------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 839 ---DVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 839 ---~~~~~~-----------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
....+. +..............+.+++.+||+.||++|||++|+++...+...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 111100 0011123445667789999999999999999999999998876554
No 44
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6e-39 Score=378.25 Aligned_cols=258 Identities=29% Similarity=0.449 Sum_probs=212.4
Q ss_pred HHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
...+++.+.||+|+||.||+|.++. ++.||||+++... ...+.|.+|+.+|++++||||++++++|......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3446678899999999999999874 8899999997543 3457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 298 ~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred cCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999999754 34568999999999999999999998 8999999999999999999999999999987654332
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.......+++.|+|||.+....++.++||||||+++|||++ |+.||...+.. ...+. +..+..
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~--------- 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL----LEKDYR--------- 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----HHTTCC---------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCC---------
Confidence 22333446789999999988889999999999999999999 99999744322 12221 222111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
...+......+.+++.+||+.+|++|||++||++.|+.+..
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 01122233468899999999999999999999999998753
No 45
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5e-39 Score=365.28 Aligned_cols=261 Identities=26% Similarity=0.481 Sum_probs=200.0
Q ss_pred HHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
....+++.+.||+|+||.||+|++. ++..||||+++... ....+.|.+|+.++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3345667889999999999999875 57789999987643 334568999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+++|+|.++++.. ...+++.+++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999999743 4568999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccce--eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 766 EEDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 766 ~~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... ..+..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~---~~~----~~i~~~~~-- 268 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ---DVI----KAVDEGYR-- 268 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---HHH----HHHHTTEE--
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCC--
Confidence 5432221 112235678999999988899999999999999999998 99999733221 111 12222111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
...+......+.+++.+||+.+|++||+++||++.|++++...
T Consensus 269 -------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 -------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0111223347889999999999999999999999999887643
No 46
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.4e-38 Score=348.77 Aligned_cols=260 Identities=19% Similarity=0.235 Sum_probs=208.9
Q ss_pred HhhcccccccccEEEEEEEE-CCCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
|++.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 55678999999999999987 478999999986532 235688999999999 8999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc-----EEEeeccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAEE 767 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~-----vkL~DFGla~~~~~ 767 (935)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++....
T Consensus 88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 88 GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 99999999753 4579999999999999999999998 89999999999999998887 99999999987644
Q ss_pred cccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 768 DLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 768 ~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~- 241 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI- 241 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH-
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH-
Confidence 3221 123456999999999999999999999999999999999999999854433322222222111111000
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 842 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 842 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
..+.. ..+ .+.+++.+||+.+|.+||++++|.+.|+++....
T Consensus 242 ----~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 242 ----EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp ----HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ----HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00000 112 7889999999999999999999999999776543
No 47
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=345.72 Aligned_cols=261 Identities=30% Similarity=0.510 Sum_probs=202.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
.+++.+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence 4566789999999999999987 889999998643 345789999999999999999999999874 47899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc-EEEeeccccccccccccce
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~-vkL~DFGla~~~~~~~~~~ 772 (935)
|+|.+++........+++..++.++.|+++||+|||+...++|+||||||+|||++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~--- 160 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--- 160 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc---
Confidence 999999985433345789999999999999999999743368999999999999998886 7999999997654321
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ....|. ...+... ......
T Consensus 161 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~ 229 (307)
T 2eva_A 161 -TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWA---VHNGTRP-----PLIKNL 229 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HHHHHH---HHTTCCC-----CCBTTC
T ss_pred -ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HHHHHH---HhcCCCC-----Cccccc
Confidence 22358999999999999899999999999999999999999997332211 111111 1112111 111122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCCCC
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQ 897 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~ 897 (935)
...+.+++.+||+.+|++|||++|+++.|+.+.........
T Consensus 230 ----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 230 ----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred ----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 23688999999999999999999999999998876654443
No 48
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.6e-38 Score=349.65 Aligned_cols=246 Identities=24% Similarity=0.358 Sum_probs=202.0
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
+++.+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~ 86 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence 556789999999999999886 68999999986532 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 87 ANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999873 4568999999999999999999998 8999999999999999999999999999986432221
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.. .+. ..+..+.. .+
T Consensus 161 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~----~~i~~~~~------~~-- 224 (337)
T 1o6l_A 161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLF----ELILMEEI------RF-- 224 (337)
T ss_dssp -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHCCC------CC--
T ss_pred -cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHH----HHHHcCCC------CC--
Confidence 223456899999999999999999999999999999999999999743221 111 11211111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~ 884 (935)
+......+.+++.+||+.||++|| +++|+++.
T Consensus 225 --p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 --PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112233678999999999999999 89998764
No 49
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.6e-38 Score=338.97 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=209.5
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
.+++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4566889999999999999998899999999876432 346789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccccee
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 773 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 773 (935)
++|.+++... ...+++..++.++.|+++||+|||+ ++++||||||+||+++.++.+||+|||++...........
T Consensus 88 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 88 GCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 9999999753 3568999999999999999999998 8999999999999999999999999999987644322222
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
....++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... .... .+..+.. ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~i~~~~~-----~~~---- 226 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE----DISTGFR-----LYK---- 226 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCC-----CCC----
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHH----HHhcCCc-----CCC----
Confidence 33457788999999988889999999999999999999 89999743221 1111 1222211 001
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
+......+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11123368899999999999999999999999998765
No 50
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.5e-38 Score=344.48 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=198.6
Q ss_pred HHHHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
...|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3456778999999999999998753 4579999987543 334567999999999999999999999985 456899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccC
Confidence 99999999999999743 4468999999999999999999998 899999999999999999999999999998765
Q ss_pred ccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
...........+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ..... +..+....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~~~----i~~~~~~~--- 237 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGR----IENGERLP--- 237 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHH----HHTTCCCC---
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHHHH----HHcCCCCC---
Confidence 443333333456789999999988889999999999999999997 99999743322 12221 22221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
+ +......+.+++.+||+.+|++||++.|+++.|+++...+.
T Consensus 238 --~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 238 --M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp --C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 11223468899999999999999999999999999876543
No 51
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-37 Score=344.97 Aligned_cols=260 Identities=22% Similarity=0.291 Sum_probs=199.0
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchh--hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|.+.+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 101 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence 35667899999999999999988999999998654322 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++ +|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 102 ~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 102 EK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp SE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 75 88887764 34568999999999999999999998 89999999999999999999999999999876433222
Q ss_pred eeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe---ee-----
Q 002336 772 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV---IS----- 842 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~---~~----- 842 (935)
.....||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+. ...+......... ..
T Consensus 176 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 176 -YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSH
T ss_pred -ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccc
Confidence 233458999999998865 5789999999999999999999999975443322 1111111111100 00
Q ss_pred --------cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 --------IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 --------~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
..+..............+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000000112236789999999999999999999986
No 52
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.2e-39 Score=351.95 Aligned_cols=266 Identities=24% Similarity=0.400 Sum_probs=207.5
Q ss_pred HHHHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeecc--
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-- 681 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~-----~~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~-- 681 (935)
+....+++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 3344567789999999999999984 3689999999875432 3346789999999999999999999999776
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 761 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGl 761 (935)
...++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 6689999999999999999642 4568999999999999999999998 8999999999999999999999999999
Q ss_pred ccccccccc--ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCc--------ccchhHHHHH
Q 002336 762 SRQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--------GAELNIVHWA 831 (935)
Q Consensus 762 a~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~--------~~~~~l~~~~ 831 (935)
+........ .......||..|+|||.+.+..++.++||||+|+++|+|++|..|+..... ..........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987654432 223344578889999999888899999999999999999999998652210 0011111111
Q ss_pred HHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhh
Q 002336 832 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 889 (935)
Q Consensus 832 ~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~ 889 (935)
...+..+... ..+......+.+++.+||+.||++|||++|+++.|++++
T Consensus 253 ~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2222222111 112223347889999999999999999999999999875
No 53
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.2e-38 Score=344.32 Aligned_cols=261 Identities=29% Similarity=0.444 Sum_probs=215.2
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
+....+++.+.||+|+||.||+|.+. +++.||+|++... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34455677899999999999999987 4889999998754 334578999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++++|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp ECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999999754 34568999999999999999999998 89999999999999999999999999999876654
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
.........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+.+ ..+..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~----~~~~~------- 230 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELL----EKDYR------- 230 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH----HTTCC-------
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----hccCC-------
Confidence 4433444557889999999988889999999999999999999 999997443321 22211 11110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
...+......+.+++.+||+.+|++|||++|+++.|+++...
T Consensus 231 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 231 --MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 011122234688999999999999999999999999887654
No 54
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.2e-38 Score=364.70 Aligned_cols=252 Identities=29% Similarity=0.488 Sum_probs=205.7
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc-eEEEEEEec
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEYM 691 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~-~~~lV~E~~ 691 (935)
..+++.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+++|++++||||+++++++.... ..++||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 34566789999999999999987 8899999997643 4578999999999999999999999986654 789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++|+|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp TTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999753 23447899999999999999999998 899999999999999999999999999998543321
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... .+..+...
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~----~i~~~~~~--------- 405 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----RVEKGYKM--------- 405 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH----HHHTTCCC---------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC---------
Confidence 12346889999999998899999999999999999998 999997443221 211 22222111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
..+......+.+++.+||+.+|++|||+++|++.|+++...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11222234788999999999999999999999999987754
No 55
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-38 Score=369.99 Aligned_cols=259 Identities=27% Similarity=0.434 Sum_probs=205.0
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
..+++.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4456788999999999999999988899999997543 234679999999999999999999999876 67899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+|+|.+++... .+..+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 262 ~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 262 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 99999999742 23458999999999999999999998 899999999999999999999999999998765433222
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 851 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~ 851 (935)
.....++..|+|||.+....++.++||||||+++|||++ |+.||...... .. ...+..+... .
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~----~~~i~~~~~~---------~ 401 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EV----LDQVERGYRM---------P 401 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HH----HHHHHTTCCC---------C
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHcCCCC---------C
Confidence 333456789999999988889999999999999999999 99999743221 11 1222222111 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 852 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 852 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.+......+.+++.+||+.+|++|||+++|++.|+++.....
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 112233468899999999999999999999999998875443
No 56
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.1e-38 Score=345.33 Aligned_cols=261 Identities=26% Similarity=0.432 Sum_probs=211.2
Q ss_pred HHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
...+.+.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 34566788999999999999986 245889999987543 34457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCC
Q 002336 685 ILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS 743 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp 743 (935)
++||||+++++|.+++..... ...+++..++.++.|+++||+|||+ ++|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence 999999999999999975432 2348899999999999999999998 8999999999
Q ss_pred CCccccCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCc
Q 002336 744 SNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF 821 (935)
Q Consensus 744 ~NILld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~ 821 (935)
+|||++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876443222 1223356788999999988889999999999999999999 9999974433
Q ss_pred ccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 822 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 822 ~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
.. +.. .+..+.... .+......+.+++.+||+.||++||+++|+++.|+++...
T Consensus 259 ~~---~~~----~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ER---LFN----LLKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG---HHH----HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH---HHH----HhhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 222 222221111 1112234688999999999999999999999999988764
No 57
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-37 Score=344.67 Aligned_cols=265 Identities=31% Similarity=0.498 Sum_probs=204.2
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
++....+.+.+.||+|+||.||+|.+. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 344456778899999999999999875 35889987653 33445789999999999999999999998764 45799
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||+++++|.+++... ...+++.+++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999743 4679999999999999999999998 899999999999999999999999999997654
Q ss_pred cc-ccceeecccCCccccCCCCCC---CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 767 ED-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 767 ~~-~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
.. .........||+.|+|||.+. +..++.++||||||+++|||++|+.||......+ .... .+..+....
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~----~~~~~~~~~ 257 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIF----MVGRGYASP 257 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHH----HHHHTCCCC
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHH----HHhcCCCCc
Confidence 31 112223346899999999874 6678999999999999999999999997433211 1111 111111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.+. .+ .......+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 258 ~~~-~~----~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 258 DLS-KL----YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CST-TS----CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred chh-hh----hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111 11 1122346889999999999999999999999999877644
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-38 Score=349.27 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=209.8
Q ss_pred HHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
..+++.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 44567889999999999999875 34889999997643 334567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCC
Q 002336 686 LVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 744 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~ 744 (935)
+||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+ ++|+||||||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~ 203 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATR 203 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcc
Confidence 99999999999999875321 2578999999999999999999998 89999999999
Q ss_pred CccccCCCcEEEeecccccccccccc-ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcc
Q 002336 745 NILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFG 822 (935)
Q Consensus 745 NILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~ 822 (935)
|||++.++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 283 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH
Confidence 99999999999999999976543221 12233457899999999988889999999999999999999 99999743221
Q ss_pred cchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 823 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 823 ~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.. ...+..+..... +......+.+++.+||+.+|++||+++||++.|+++....
T Consensus 284 ---~~----~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 284 ---EV----IYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ---HH----HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ---HH----HHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11 122333322111 1122346889999999999999999999999999887643
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=346.00 Aligned_cols=252 Identities=22% Similarity=0.305 Sum_probs=204.1
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh------hhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
...|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356778899999999999999886 6899999998654321 346789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC----cEEEeecc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 760 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~----~vkL~DFG 760 (935)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999973 4679999999999999999999998 8999999999999999887 79999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
+++....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||....... .. .. +.....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~---~~-~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TL---AN-VSAVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HH---HH-HHHTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HH---HH-HHhcCC
Confidence 9987643322 223468999999999998899999999999999999999999997432211 11 11 111110
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
. ....... .....+.+++.+||+.||++|||++|+++.
T Consensus 235 ~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 E--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp C--CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred C--cCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000001 112367899999999999999999999873
No 60
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7e-39 Score=356.88 Aligned_cols=270 Identities=25% Similarity=0.375 Sum_probs=211.0
Q ss_pred HHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeee--ccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~--~~~~~ 684 (935)
...+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 34567789999999999999985 368899999998776666778999999999999999999999886 45668
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999999742 3468999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCccc--------chhHHHHHHHh
Q 002336 765 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSM 834 (935)
Q Consensus 765 ~~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~--------~~~l~~~~~~~ 834 (935)
....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ...........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6543322 2233457888999999988889999999999999999999999986332210 00011111122
Q ss_pred hhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCC
Q 002336 835 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 895 (935)
Q Consensus 835 i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 895 (935)
+..+.. ...+......+.+++.+||+.+|++|||++|+++.|+.+.......
T Consensus 257 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 257 LEEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred hhcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 222111 1112233447889999999999999999999999999887655443
No 61
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-38 Score=353.18 Aligned_cols=257 Identities=23% Similarity=0.409 Sum_probs=201.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCc----EEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
..|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 44667889999999999999875 344 46888876433 234578999999999999999999999998764 789
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
|+||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 94 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999998753 4569999999999999999999998 899999999999999999999999999998764
Q ss_pred ccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 767 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 767 ~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
..... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +.. .+..+...
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~~~~--- 238 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL--- 238 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCC---
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHH----HHHcCCCC---
Confidence 43222 2223346889999999998899999999999999999999 999997443322 111 12222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
..+......+.+++.+||+.+|++||+++|+++.|+.+...
T Consensus 239 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 ------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 11122234688999999999999999999999999887654
No 62
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.9e-37 Score=348.98 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=202.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh------hhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
.|++.+.||+|+||.||+|..+ +|+.||+|++...... ..+.+.+|+.+|+.++||||+++++++.+....++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 3567889999999999999886 6899999998754322 24678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC----cEEEeecccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGLS 762 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~----~vkL~DFGla 762 (935)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++ .+||+|||++
T Consensus 93 v~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999973 4579999999999999999999998 8999999999999998777 7999999999
Q ss_pred ccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
+....... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...... .. .. .+..+...
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~---~~-~i~~~~~~- 236 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ET---LA-NITAVSYD- 236 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HH---HH-HHHTTCCC-
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HH---HH-HHHhcCCC-
Confidence 87654322 23356999999999999889999999999999999999999999743221 11 11 12221110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+++..... ....+.+++.+||..||++|||++|+++
T Consensus 237 -~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111 1236789999999999999999999985
No 63
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.1e-38 Score=354.08 Aligned_cols=263 Identities=27% Similarity=0.425 Sum_probs=208.9
Q ss_pred HHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeeccc-
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH- 682 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~- 682 (935)
...+++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 345667899999999999999742 468899999976433 3456799999999999 7999999999987754
Q ss_pred eEEEEEEecCCCCHHHHhccCCC---------------------------------------------------------
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVN--------------------------------------------------------- 705 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~--------------------------------------------------------- 705 (935)
..++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 48999999999999999975421
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc-ceeecccC
Q 002336 706 ------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARG 778 (935)
Q Consensus 706 ------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~g 778 (935)
...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .......|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 1228899999999999999999998 8999999999999999999999999999986543322 22334568
Q ss_pred CccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHH
Q 002336 779 TVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESI 857 (935)
Q Consensus 779 t~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~ 857 (935)
|+.|+|||++.+..++.++||||||+++|||++ |+.||....... .. ...+..+.... . +....
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~----~~~~~~~~~~~-----~----~~~~~ 322 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF----CRRLKEGTRMR-----A----PDYTT 322 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HH----HHHHHHTCCCC-----C----CTTCC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HH----HHHHHcCCCCC-----C----CCCCC
Confidence 899999999988889999999999999999998 999997443321 11 11222221111 1 11122
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 858 WRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 858 ~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
..+.+++.+||+.+|++|||++||++.|++++...
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 36889999999999999999999999999887643
No 64
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.7e-37 Score=349.55 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=205.4
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
.....|++.+.||+|+||.||+|.++ +|+.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567888999999999999999876 6899999998653 23345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC---CcEEEeeccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLSR 763 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~---~~vkL~DFGla~ 763 (935)
||||+++|+|.+.+.. ...+++..+..++.||++||+|||+ ++|+||||||+|||++.+ +.+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 9999999999998873 4568999999999999999999998 899999999999999865 459999999998
Q ss_pred cccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 764 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 764 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .+. ..+..+....
T Consensus 180 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~----~~i~~~~~~~- 249 (362)
T 2bdw_A 180 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLY----AQIKAGAYDY- 249 (362)
T ss_dssp CCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHTCCCC-
T ss_pred EecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHH----HHHHhCCCCC-
Confidence 7654322 22356999999999999989999999999999999999999999743221 111 1222222110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+ .. ......+.+++.+||+.||++||+++|+++.
T Consensus 250 ~~~-~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSP-EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTT-GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred Ccc-cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00 1123468899999999999999999998754
No 65
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=338.46 Aligned_cols=247 Identities=28% Similarity=0.387 Sum_probs=193.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--------------------------hhhHHHHHHHHHHHhc
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRI 666 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--------------------------~~~~~~~~E~~iL~~L 666 (935)
.|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 3567889999999999999875 688999999865321 1235688999999999
Q ss_pred CCCcccccceeeec--cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCC
Q 002336 667 HHRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 744 (935)
Q Consensus 667 ~HpnIv~l~g~~~~--~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~ 744 (935)
+||||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.|+++||+|||+ ++|+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 99999999999976 568899999999999988654 4579999999999999999999998 89999999999
Q ss_pred CccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCCC---CCchhHHHHHHHHHHHHHhCCCCCCccCc
Q 002336 745 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDF 821 (935)
Q Consensus 745 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~---~s~ksDVwS~Gvil~eLltG~~Pf~~~~~ 821 (935)
|||++.++.+||+|||+++........ .....||+.|+|||.+.+.. .+.++||||||+++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876543222 23456899999999987654 47899999999999999999999974322
Q ss_pred ccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 822 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 822 ~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. .. ...+....... + .. ......+.+++.+||+.||++||+++|+++
T Consensus 246 ~------~~-~~~~~~~~~~~---~-~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M------CL-HSKIKSQALEF---P-DQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H------HH-HHHHHHCCCCC---C-SS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H------HH-HHHHhcccCCC---C-Cc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 11 11222211110 0 00 112236889999999999999999999864
No 66
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.6e-38 Score=337.45 Aligned_cols=249 Identities=31% Similarity=0.432 Sum_probs=192.3
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchh----hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~----~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+++.+.||+|+||.||+|.+. ++.||||++...... ..+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 3566789999999999999986 899999998654322 24678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc---eEecCCCCCCccccC--------CCcEEEee
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVSD 758 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~---ivH~DLkp~NILld~--------~~~vkL~D 758 (935)
|+++++|.+++. ...+++..++.++.|+++||+|||+ ++ |+||||||+|||++. ++.+||+|
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 87 FARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp CCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred cCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999986 3568999999999999999999998 66 999999999999986 77899999
Q ss_pred ccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC
Q 002336 759 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 838 (935)
Q Consensus 759 FGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~ 838 (935)
||++........ ....|++.|+|||.+.+..++.++||||||+++++|++|+.||....... . .......
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~---~~~~~~~- 229 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---V---AYGVAMN- 229 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---H---HHHHHTS-
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHhhhcC-
Confidence 999986544322 23458999999999988889999999999999999999999997432211 1 1111111
Q ss_pred CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhh
Q 002336 839 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 888 (935)
Q Consensus 839 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~ 888 (935)
... ...+......+.+++.+||+.+|++|||++|+++.|+++
T Consensus 230 ~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KLA--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCC--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 110 011122234688999999999999999999999999763
No 67
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-38 Score=353.60 Aligned_cols=266 Identities=26% Similarity=0.419 Sum_probs=208.8
Q ss_pred HHHHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCcc-hhhhHHHHHHHHHHHhc-CCCcccccceeeecc
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 681 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~ 681 (935)
+....+++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3445667789999999999999986 246689999987542 23457899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCC--------------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCC
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVN--------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDV 741 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DL 741 (935)
+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ ++|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence 999999999999999999975422 1348999999999999999999998 89999999
Q ss_pred CCCCccccCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcc
Q 002336 742 KSSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVE 819 (935)
Q Consensus 742 kp~NILld~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~ 819 (935)
||+|||++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876443322 2233457889999999988889999999999999999998 99999744
Q ss_pred CcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 820 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 820 ~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.... .... .+..+... ..+......+.+++.+||+.+|++||+++||++.|+.+.....
T Consensus 279 ~~~~--~~~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 279 PVDA--NFYK----LIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCSH--HHHH----HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CcHH--HHHH----HHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 3221 1111 22222110 1111223468899999999999999999999999998876544
No 68
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.4e-38 Score=341.12 Aligned_cols=259 Identities=26% Similarity=0.439 Sum_probs=209.5
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
..+++.+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 4567789999999999999999888899999987543 235679999999999999999999999874 45899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+++|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+||++++++.+||+|||++..........
T Consensus 91 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 91 NGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 99999998742 12368999999999999999999998 899999999999999999999999999998765443333
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 851 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~ 851 (935)
.....++..|+|||.+.+..++.++||||||++++||++ |+.||...... .... .+..+.. ...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~----~~~~~~~-----~~~--- 231 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQ----NLERGYR-----MVR--- 231 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCC-----CCC---
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHH----HHhcccC-----CCC---
Confidence 333456788999999988889999999999999999999 99999743221 1111 1222211 011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 852 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 852 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
+......+.+++.+|++.+|++|||++++++.|+++.....
T Consensus 232 -~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 232 -PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 11223468899999999999999999999999999876543
No 69
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-38 Score=350.63 Aligned_cols=263 Identities=25% Similarity=0.392 Sum_probs=208.6
Q ss_pred hhcccccccccEEEEEEEEC-----CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeec--cceEEEE
Q 002336 616 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILV 687 (935)
Q Consensus 616 ~~~~~LG~G~fG~Vy~~~~~-----~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~--~~~~~lV 687 (935)
++.+.||+|+||.||++.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 67889999999999998753 588999999976533 345679999999999999999999999977 4678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999974 348999999999999999999998 8999999999999999999999999999987654
Q ss_pred cccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCccc--------chhHHHHHHHhhhc
Q 002336 768 DLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSMIKK 837 (935)
Q Consensus 768 ~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~--------~~~l~~~~~~~i~~ 837 (935)
.... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ...........+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 3321 2233457888999999988889999999999999999999999986332110 00011111222222
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 838 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 838 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
+.. ...+......+.+++.+||+.+|++|||++|+++.|+.+......
T Consensus 267 ~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 267 GER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred ccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 211 111222334788999999999999999999999999988765543
No 70
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.8e-38 Score=346.99 Aligned_cols=263 Identities=29% Similarity=0.449 Sum_probs=212.1
Q ss_pred HHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeeccce
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~ 683 (935)
...+.+.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|+.+++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 34567789999999999999985 2468899999976433 3457799999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCC---------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc
Q 002336 684 RILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 748 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~---------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl 748 (935)
.++||||+++|+|.+++..... ...+++..+++++.|+++||+|||+ ++|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 9999999999999999875421 2358999999999999999999998 899999999999999
Q ss_pred cCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchh
Q 002336 749 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 826 (935)
Q Consensus 749 d~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~ 826 (935)
+.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--K 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--H
Confidence 99999999999999876544322 2233457889999999988889999999999999999999 999997443221 1
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 827 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 827 l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
... .+..+.. .. .+......+.+++.+||+.+|++|||++|+++.|+++....
T Consensus 257 ~~~----~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 257 FYK----MIKEGFR-----ML----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHH----HHHHTCC-----CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHH----HhccCCC-----CC----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 111 1211111 00 11122346889999999999999999999999999887643
No 71
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-37 Score=345.83 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=181.0
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeeccceEEEEEEecCCCCH
Q 002336 619 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
+.||+|+||.||+|.+. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 68999999999999886 6899999998643 3456788999999997 99999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC---cEEEeecccccccccccccee
Q 002336 697 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 773 (935)
Q Consensus 697 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~---~vkL~DFGla~~~~~~~~~~~ 773 (935)
.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+|||++.++ .+||+|||+++........ .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999984 4679999999999999999999998 8999999999999997665 8999999999865433222 2
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 853 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~ 853 (935)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+..........+...+..+.... .. ...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~~----~~~ 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--EG----EAW 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--CS----HHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--Cc----ccc
Confidence 334589999999999999999999999999999999999999985443211111222233333332210 00 000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 854 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 854 ~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
......+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 112346889999999999999999999864
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=359.17 Aligned_cols=266 Identities=27% Similarity=0.450 Sum_probs=211.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeecc
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 681 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~ 681 (935)
++....+++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++...
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 444556778899999999999999853 46789999987543 34456789999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC---cE
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RA 754 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~---~v 754 (935)
...++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999987532 22468999999999999999999998 8999999999999999555 59
Q ss_pred EEeeccccccccccc-cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHH
Q 002336 755 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 832 (935)
Q Consensus 755 kL~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 832 (935)
||+|||+++...... ........||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~---- 296 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVL---- 296 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHH----
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----
Confidence 999999997643221 122233457899999999988899999999999999999998 99999743221 111
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 833 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 833 ~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
..+..+.... .+......+.+++.+||+.+|++||+++||++.|+.+.....
T Consensus 297 ~~i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 297 EFVTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 1222221111 111223368899999999999999999999999998876543
No 73
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.5e-37 Score=334.61 Aligned_cols=252 Identities=31% Similarity=0.520 Sum_probs=201.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhh-------hHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~-------~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
..+++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 44667889999999999999875 78999999986432211 167899999999999999999999997665
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCccccCCCc-----EEEe
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AKVS 757 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld~~~~-----vkL~ 757 (935)
++||||+++|+|.+.+.. ....+++..++.++.|+++||+|||+ ++ |+||||||+|||++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 699999999999998864 34579999999999999999999998 78 999999999999988776 9999
Q ss_pred eccccccccccccceeecccCCccccCCCCC--CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhh
Q 002336 758 DFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 835 (935)
Q Consensus 758 DFGla~~~~~~~~~~~~~~~gt~~y~APE~l--~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i 835 (935)
|||+++..... .....|++.|+|||.+ ....++.++||||+|+++|||++|+.||........ .......
T Consensus 172 Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~ 243 (287)
T 4f0f_A 172 DFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----KFINMIR 243 (287)
T ss_dssp CCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH----HHHHHHH
T ss_pred CCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH----HHHHHHh
Confidence 99999754432 2335689999999998 455678999999999999999999999974333211 1111111
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhh
Q 002336 836 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 888 (935)
Q Consensus 836 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~ 888 (935)
..+. .+.+ +......+.+++.+||+.||++|||++|+++.|+++
T Consensus 244 ~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGL-----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCC-----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111 1111 122234688999999999999999999999999864
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.9e-37 Score=344.63 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=197.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccc--------
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 682 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~-------- 682 (935)
..|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++|++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 34667899999999999999987 79999999986533 334578999999999999999999999885543
Q ss_pred -------------------------------------------------eEEEEEEecCCCCHHHHhccCCCCCCCCHHH
Q 002336 683 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 713 (935)
Q Consensus 683 -------------------------------------------------~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~ 713 (935)
..++||||+++++|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 3799999999999999998665555567778
Q ss_pred HHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc-----------ceeecccCCccc
Q 002336 714 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 782 (935)
Q Consensus 714 ~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~-----------~~~~~~~gt~~y 782 (935)
++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999998 8999999999999999999999999999987654321 112334689999
Q ss_pred cCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHH
Q 002336 783 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 862 (935)
Q Consensus 783 ~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~ 862 (935)
+|||.+.+..++.++||||||+++|||++|..|+. .... ............. .......+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVR-IITDVRNLKFPLL---------FTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHH-HHHHHHTTCCCHH---------HHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHH-HHHHhhccCCCcc---------cccCChhHHH
Confidence 99999988899999999999999999999877653 1111 1111111111110 1122346789
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 002336 863 VAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 863 li~~Cl~~dP~~RPs~~ev~~ 883 (935)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 75
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8.9e-38 Score=347.02 Aligned_cols=264 Identities=26% Similarity=0.412 Sum_probs=196.1
Q ss_pred HHHHHhhcccccccccEEEEEEEECCC----cEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~~g----~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
....|++.+.||+|+||.||+|.+... ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 345677789999999999999987643 27999998754 334567899999999999999999999999876655
Q ss_pred ------EEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEE
Q 002336 685 ------ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 755 (935)
Q Consensus 685 ------~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vk 755 (935)
++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999886432 22368999999999999999999998 8999999999999999999999
Q ss_pred Eeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHH
Q 002336 756 VSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 756 L~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~---- 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN---- 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH----
Confidence 9999999875443221 1223346788999999988889999999999999999999 999997433321 111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.+..+... ..+......+.+++.+||+.||++|||+.|+++.|++++.-..
T Consensus 251 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 251 YLIGGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHhcCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 11111111 1112223468899999999999999999999999999887544
No 76
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.6e-37 Score=353.02 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=198.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++||
T Consensus 53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~ 132 (396)
T 4dc2_A 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132 (396)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence 3567889999999999999986 57889999987542 22345688999999887 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 133 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999874 4569999999999999999999998 89999999999999999999999999999863322
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCccc--chhHHHHHHHhhhcCCeeecccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVDP 846 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~--~~~l~~~~~~~i~~~~~~~~~d~ 846 (935)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+.+.+.+..+..
T Consensus 207 ~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp TC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred CC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 21 2334569999999999999999999999999999999999999997433221 11122223333333221
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002336 847 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 878 (935)
Q Consensus 847 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 878 (935)
. .+......+.+++.+||+.||++||++
T Consensus 280 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 R----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred C----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 111223367899999999999999985
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.6e-37 Score=349.86 Aligned_cols=255 Identities=23% Similarity=0.300 Sum_probs=203.6
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-----hhhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-----~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
....|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567888999999999999999876 68999999985321 11346789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc---EEEeecc
Q 002336 685 ILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFG 760 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~---vkL~DFG 760 (935)
++||||+++++|.+.+.... .+..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988775432 34468999999999999999999998 89999999999999986654 9999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
+++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..+. ..+..+..
T Consensus 179 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~----~~i~~~~~ 249 (351)
T 3c0i_A 179 VAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLF----EGIIKGKY 249 (351)
T ss_dssp TCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHH----HHHHHTCC
T ss_pred ceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHH----HHHHcCCC
Confidence 9987654322 1234569999999999998899999999999999999999999997421 1111 11111211
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ..+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 K--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp C--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 01111111 1236889999999999999999999976
No 78
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.7e-37 Score=349.73 Aligned_cols=269 Identities=17% Similarity=0.236 Sum_probs=207.0
Q ss_pred HHHhhcccccccccEEEEEEEECC------CcEEEEEEccCcchhh-----------hHHHHHHHHHHHhcCCCcccccc
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHR-----------TQQFVTEVALLSRIHHRNLVPLI 675 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~------g~~vAvK~~~~~~~~~-----------~~~~~~E~~iL~~L~HpnIv~l~ 675 (935)
..|++.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 346678999999999999998864 4789999986543211 12344566677788899999999
Q ss_pred eeeecc----ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc--
Q 002336 676 GYCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-- 749 (935)
Q Consensus 676 g~~~~~----~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld-- 749 (935)
+++... ...++||||+ +++|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+|||++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESS
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecC
Confidence 998764 4589999999 9999999975 24679999999999999999999998 8999999999999999
Q ss_pred CCCcEEEeeccccccccccccce------eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCccc
Q 002336 750 INMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 823 (935)
Q Consensus 750 ~~~~vkL~DFGla~~~~~~~~~~------~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~ 823 (935)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 88999999999998764432211 12334999999999999989999999999999999999999999743222
Q ss_pred chhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 824 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 824 ~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.....+...... ..+..++++.+... ..+..+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 268 -~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 -PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp -HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 222222222221 12333344333211 112368899999999999999999999999998876543
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6e-37 Score=349.93 Aligned_cols=260 Identities=21% Similarity=0.297 Sum_probs=201.2
Q ss_pred HHhhccccccc--ccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G--~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 35678999999 99999999987 69999999986542 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++... ....+++..+..++.||++||+|||+ ++|+||||||+|||++.++.+||+|||.+......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999998754 23569999999999999999999998 89999999999999999999999999988654322
Q ss_pred cc------ceeecccCCccccCCCCCCC--CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 769 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 769 ~~------~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +..... +..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~-----~~~ 254 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLN-----GTV 254 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhc-----CCC
Confidence 11 11122368999999999877 6789999999999999999999999974433211 111000 000
Q ss_pred eeccccc-----------------------c-------------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 841 ISIVDPV-----------------------L-------------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 841 ~~~~d~~-----------------------l-------------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+.+.. + ....+......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000 0 000111223468899999999999999999999864
No 80
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=344.49 Aligned_cols=259 Identities=21% Similarity=0.285 Sum_probs=191.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceee--------ecc
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYC--------EEE 681 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~--------~~~ 681 (935)
...+++.+.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++++. ||||+++++++ ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 345677899999999999999975 68999999987666666778999999999996 99999999998 344
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCccccCCCcEEEeec
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDF 759 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld~~~~vkL~DF 759 (935)
...++||||+. |+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence 56899999995 7999988754445679999999999999999999997 77 999999999999999999999999
Q ss_pred cccccccccccce-----------eecccCCccccCCCCC---CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccch
Q 002336 760 GLSRQAEEDLTHI-----------SSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 825 (935)
Q Consensus 760 Gla~~~~~~~~~~-----------~~~~~gt~~y~APE~l---~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~ 825 (935)
|+++......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 9998765432211 1134589999999998 5677899999999999999999999999732211
Q ss_pred hHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 826 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 826 ~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.... +.. ....... ....+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 260 ---~~~~-----~~~----~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 ---RIVN-----GKY----SIPPHDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------C----CCCTTCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---Hhhc-----Ccc----cCCcccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0000 000 0000011 11247799999999999999999999999998876543
No 81
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.1e-38 Score=341.77 Aligned_cols=255 Identities=22% Similarity=0.392 Sum_probs=202.8
Q ss_pred HHHHHhhcccccccccEEEEEEEECC-C-------cEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 682 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~~-g-------~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~ 682 (935)
....+.+.+.||+|+||.||+|.+.. + +.||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 34456778999999999999998653 3 579999997666666678999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc--------E
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--------A 754 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~--------v 754 (935)
..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++. +
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999999753 3448999999999999999999998 89999999999999998887 9
Q ss_pred EEeeccccccccccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHH
Q 002336 755 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 755 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
||+|||++...... ....|++.|+|||.+.+ ..++.++||||||+++|||++|..|+...... .......
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~~~-- 231 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQFY-- 231 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHH--
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHHHh--
Confidence 99999998765332 12347889999999877 77899999999999999999965444312111 1111111
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
........ .. ...+.+++.+||+.||++|||++|+++.|+++....
T Consensus 232 -~~~~~~~~--------~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 232 -EDRHQLPA--------PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp -HTTCCCCC--------CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred -hccCCCCC--------CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 11111111 11 125789999999999999999999999999887733
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=355.27 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=203.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
...|++.+.||+|+||.||+|... +|+.+|+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456778899999999999999875 78999999986543 234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc---CCCcEEEeeccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 765 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld---~~~~vkL~DFGla~~~ 765 (935)
||+++|+|.+.+.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++ .++.+||+|||++...
T Consensus 90 E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999998874 4569999999999999999999998 8999999999999998 5688999999999876
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+.. ... ..+..+.... ..
T Consensus 164 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~----~~i~~~~~~~-~~ 234 (444)
T 3soa_A 164 EGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLY----QQIKAGAYDF-PS 234 (444)
T ss_dssp CTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHH----HHHHHTCCCC-CT
T ss_pred cCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHH----HHHHhCCCCC-Cc
Confidence 543322 23356999999999999989999999999999999999999999743321 111 1222222110 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+ ... .....+.+++.+||+.||++|||++|+++.
T Consensus 235 ~-~~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 P-EWD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp T-TTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred c-ccc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 011 122368899999999999999999999874
No 83
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-37 Score=340.18 Aligned_cols=250 Identities=19% Similarity=0.293 Sum_probs=203.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|.+.+.||+|+||.||+|.+. +++.+|+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 3566789999999999999876 5889999998754 3445678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC--CCcEEEeecccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~--~~~vkL~DFGla~~~~~~~~ 770 (935)
+|+|.+++.. ....+++..+..++.|+++||+|||+ ++|+||||||+|||++. ++.+||+|||+++.......
T Consensus 85 g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 85 GLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999974 23568999999999999999999998 89999999999999987 78999999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... +...... .+... .++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~-~~~~~--~~~~~~~ 228 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIM-NAEYT--FDEEAFK 228 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHH-HTCCC--CCHHHHT
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHH-cCCCC--CChhhhc
Confidence 23346899999999999888999999999999999999999999743221 1111111 11110 0000001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.....+.+++.+||..||++|||++|+++.
T Consensus 229 ----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 ----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112368899999999999999999999874
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.1e-37 Score=338.51 Aligned_cols=259 Identities=19% Similarity=0.289 Sum_probs=197.3
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchh--hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
|++.+.||+|+||.||+|...+|+.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 4567899999999999999988999999998654322 23678899999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+ +|.+.+... ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 999988743 4568999999999999999999998 89999999999999999999999999999765432221
Q ss_pred eecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCC---eee-----c
Q 002336 773 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VIS-----I 843 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~---~~~-----~ 843 (935)
.....||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+ .+.. +.+...... ... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD--QLMR-IFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH-HHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-HHHHHCCCChhhchhhhcccc
Confidence 223458999999998865 468999999999999999999999997433211 1111 111111100 000 0
Q ss_pred cccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 844 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 844 ~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.++.+. ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111110 0011122346789999999999999999999875
No 85
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=349.93 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=202.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
..|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+++|+.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 34667899999999999999876 58899999986432 223467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+.+|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999983 4679999999999999999999998 89999999999999999999999999999876433
Q ss_pred ccceeecccCCccccCCCCCCC---CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~---~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
.. .....||+.|+|||++.. ..++.++|||||||++|||++|+.||............... .....
T Consensus 169 ~~--~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----~~~~~----- 237 (384)
T 4fr4_A 169 TQ--ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF----ETTVV----- 237 (384)
T ss_dssp CC--BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH----HHCCC-----
T ss_pred Cc--eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH----hhccc-----
Confidence 22 234569999999999864 45899999999999999999999999744333222222211 11110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 883 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~ev~~ 883 (935)
.++......+.+++.+||+.+|++||+ +++|.+
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 112222346889999999999999998 777654
No 86
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-37 Score=340.16 Aligned_cols=268 Identities=25% Similarity=0.389 Sum_probs=203.8
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhc--CCCcccccceeeecc----c
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE----H 682 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L--~HpnIv~l~g~~~~~----~ 682 (935)
+.....|++.+.||+|+||.||+|++. ++.||||++... ....+..|.+++..+ +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 445567888999999999999999987 999999998643 234455566666554 899999999998776 6
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC--------ceEecCCCCCCccccCCCcE
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP--------GIIHRDVKSSNILLDINMRA 754 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~--------~ivH~DLkp~NILld~~~~v 754 (935)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred ceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCE
Confidence 88999999999999999973 358999999999999999999997 6 99999999999999999999
Q ss_pred EEeeccccccccccccce---eecccCCccccCCCCCCCCCCCch------hHHHHHHHHHHHHHhC----------CCC
Q 002336 755 KVSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KKP 815 (935)
Q Consensus 755 kL~DFGla~~~~~~~~~~---~~~~~gt~~y~APE~l~~~~~s~k------sDVwS~Gvil~eLltG----------~~P 815 (935)
||+|||+++......... .....||+.|+|||++.+.....+ +|||||||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999997654432221 123468999999999877655554 9999999999999999 666
Q ss_pred CCccCcccchhHHHHHHHhhhcCCeeecccccccCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 816 VSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 816 f~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
|....... ... ......+..... .+.+.... .......+.+++.+||+.||++|||++||++.|+++.....
T Consensus 262 ~~~~~~~~-~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 262 YHDLVPSD-PSY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTTTSCSS-CCH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred HhhhcCCC-Cch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 65322211 111 111222211111 11111111 22556789999999999999999999999999998877543
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-37 Score=349.66 Aligned_cols=251 Identities=21% Similarity=0.349 Sum_probs=205.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+++|+.++||||+++++++.+....++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4667889999999999999876 689999999976655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC--CCcEEEeecccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~--~~~vkL~DFGla~~~~~~~~ 770 (935)
+|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 132 gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 99999998742 3468999999999999999999998 89999999999999974 57799999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... . +...... .++....
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~---~-i~~~~~~--~~~~~~~ 275 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQ---N-VKRCDWE--FDEDAFS 275 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---H-HHHCCCC--CCSSTTT
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCCCC--CCccccc
Confidence 23346899999999999989999999999999999999999999743221 1111 1 1111110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.....+.+++.+||+.||++|||++|+++.
T Consensus 276 ----~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 ----SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 223468899999999999999999999863
No 88
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.9e-37 Score=346.46 Aligned_cols=265 Identities=24% Similarity=0.450 Sum_probs=211.4
Q ss_pred HHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeecc
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 681 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~ 681 (935)
...+.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 345677899999999999999873 467899999976433 3457799999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 748 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl 748 (935)
+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ ++|+||||||+|||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 999999999999999999975431 2348999999999999999999998 899999999999999
Q ss_pred cCCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchh
Q 002336 749 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 826 (935)
Q Consensus 749 d~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~ 826 (935)
+.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~ 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---E 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---H
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---H
Confidence 99999999999999876543221 1223346788999999988889999999999999999999 99999743221 1
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCC
Q 002336 827 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 895 (935)
Q Consensus 827 l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 895 (935)
+.. .+..+.... . +......+.+++.+||+.+|++||+++|+++.|+++.......
T Consensus 268 ~~~----~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 268 LFK----LLKEGHRMD-----K----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp HHH----HHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHH----HHhcCCCCC-----C----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 111 222221111 1 1122346889999999999999999999999999998766543
No 89
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.7e-37 Score=345.31 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=199.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+.+..++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 3566889999999999999986 58899999987542 23456788999999988 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 90 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 90 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999874 3569999999999999999999998 89999999999999999999999999999864322
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc--hhHHHHHHHhhhcCCeeecccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDP 846 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~--~~l~~~~~~~i~~~~~~~~~d~ 846 (935)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+.+.+..+..
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 21 23345699999999999999999999999999999999999999974322111 1112222233332221
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002336 847 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 878 (935)
Q Consensus 847 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 878 (935)
.+ +......+.+++.+||+.||++||++
T Consensus 237 ~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 RI----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 11223368899999999999999995
No 90
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.5e-37 Score=331.42 Aligned_cols=252 Identities=21% Similarity=0.368 Sum_probs=203.1
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeecc--ceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~--~~~~lV~ 688 (935)
..+++.+.||+|+||.||+|+++ ++.||||++.... ....+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 34567889999999999999987 8999999987542 34456799999999999999999999999876 7889999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||+++|+|.+++... ....+++..++.++.|+++||+|||+ ++ ++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999853 23468999999999999999999997 77 9999999999999999999999998875432
Q ss_pred ccccceeecccCCccccCCCCCCCCCCCc---hhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGNQQLTE---KSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~---ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
. ....||+.|+|||.+.+...+. ++||||||+++|||++|+.||...... +........+..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~--- 229 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVALEGLR--- 229 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHHHSCCC---
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHHhcCCC---
Confidence 2 1235799999999987654443 899999999999999999999733221 111122222211
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
+.+ +......+.+++.+||+.+|++|||++|+++.|+++..
T Consensus 230 --~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 --PTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 12223468899999999999999999999999998753
No 91
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.2e-37 Score=339.00 Aligned_cols=258 Identities=28% Similarity=0.455 Sum_probs=204.5
Q ss_pred HHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+.+.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+.++++++||||+++++++.++ ..++||
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~ 91 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEE
Confidence 45667899999999999998653 3469999987653 34557899999999999999999999998754 568999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++++|.+++... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 92 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 92 ELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp ECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred ecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 999999999999742 4568999999999999999999998 89999999999999999999999999999876544
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .... +..+....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~----~~~~~~~~----- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGV----LEKGDRLP----- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHH----HHHTCCCC-----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHH----HhcCCCCC-----
Confidence 3333334457889999999988889999999999999999998 999997433221 2211 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
. +......+.+++.+||+.+|++||++.|+++.|+++...+.
T Consensus 235 ~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 235 K----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred C----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 1 11122368899999999999999999999999999877654
No 92
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-36 Score=340.66 Aligned_cols=268 Identities=25% Similarity=0.406 Sum_probs=211.0
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHh--cCCCcccccceeeeccc---
Q 002336 608 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH--- 682 (935)
Q Consensus 608 ~~l~~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~--L~HpnIv~l~g~~~~~~--- 682 (935)
.+.....+.+.+.||+|+||.||+|++. |+.||||++... ..+.+.+|.+++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 4455677888999999999999999985 999999998643 34567889999887 68999999999998765
Q ss_pred -eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCceEecCCCCCCccccCCCc
Q 002336 683 -QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMR 753 (935)
Q Consensus 683 -~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------s~~~~~ivH~DLkp~NILld~~~~ 753 (935)
..++||||+++|+|.+++.. ..+++..++.++.|+++||+||| + ++|+||||||+|||++.++.
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSC
T ss_pred ceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCC
Confidence 78999999999999999974 35899999999999999999999 6 89999999999999999999
Q ss_pred EEEeeccccccccccccc---eeecccCCccccCCCCCCCC------CCCchhHHHHHHHHHHHHHhC----------CC
Q 002336 754 AKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KK 814 (935)
Q Consensus 754 vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~APE~l~~~------~~s~ksDVwS~Gvil~eLltG----------~~ 814 (935)
+||+|||++......... ......||+.|+|||.+.+. .++.++||||||+++|||++| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999999876543322 12344689999999998765 234789999999999999999 77
Q ss_pred CCCccCcccchhHHHHHHHhhhcCCeeecccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 815 PVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 815 Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
||...... ......+.. .+..... .+.+... ...+....+.+++.+||+.+|++|||++||++.|+++...+
T Consensus 266 p~~~~~~~-~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 266 PYYDLVPS-DPSVEEMRK-VVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTTSCS-SCCHHHHHH-HHTTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CccccCcC-cccHHHHHH-HHHHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 87633221 112222222 2222111 1111111 12356678999999999999999999999999999987654
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.7e-37 Score=337.19 Aligned_cols=260 Identities=21% Similarity=0.294 Sum_probs=197.0
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 456789999999999999886 68999999986543 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++ +|.+.+.. ....+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 84 ~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 84 DQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp SE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 76 55555543 34679999999999999999999998 89999999999999999999999999999876433222
Q ss_pred eeecccCCccccCCCCCCCCC-CCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC---Ceeecc---
Q 002336 772 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISIV--- 844 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~-~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~---~~~~~~--- 844 (935)
.....||+.|+|||.+.+.. ++.++||||+|+++|||++|..|+..... .. .....+.+..... ......
T Consensus 158 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-~~-~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VD-DQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HH-HHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-HH-HHHHHHHHHhCCCChhhhhhhcccc
Confidence 23346899999999987655 79999999999999999998888642221 11 1111111111110 000000
Q ss_pred c---------ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 D---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 d---------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+ ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000111223346789999999999999999999975
No 94
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=351.59 Aligned_cols=247 Identities=24% Similarity=0.355 Sum_probs=198.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV 687 (935)
..+++.+.||+|+||.||+|+++ +|+.||||+++... ....+.+.+|.++++.+ +||||+++++++.+.+..++|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 34667899999999999999876 58999999987532 22345688899999988 699999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 103 MEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999974 4569999999999999999999998 8999999999999999999999999999986432
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. .. . ..+..+..
T Consensus 177 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~---~-~~i~~~~~------- 241 (353)
T 3txo_A 177 NGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DL---F-EAILNDEV------- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---H-HHHHHCCC-------
T ss_pred CCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HH---H-HHHHcCCC-------
Confidence 222 233456999999999998888999999999999999999999999743321 11 1 12222211
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 883 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~ev~~ 883 (935)
.++......+.+++.+||+.+|++||++ +|+++
T Consensus 242 ---~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 ---VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111123367899999999999999998 67665
No 95
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-37 Score=356.72 Aligned_cols=253 Identities=24% Similarity=0.300 Sum_probs=202.2
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
+++.+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|..++..++||||+++++++.+.+..++||||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey 155 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY 155 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence 455789999999999999987 478899999865322 1234589999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 156 ~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 156 YVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 9999999999742 4579999999999999999999998 8999999999999999999999999999987655444
Q ss_pred ceeecccCCccccCCCCCC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 771 HISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+. ...+......-..
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~----- 302 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERFQF----- 302 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC-----
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhccccccC-----
Confidence 4444567999999999986 56789999999999999999999999974432211 1111100000001
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 884 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~ev~~~ 884 (935)
+..... ....+.+++.+||..+|++ ||+++|+++.
T Consensus 303 p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 PTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred Cccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111011 2236789999999888888 9999999764
No 96
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=339.89 Aligned_cols=261 Identities=22% Similarity=0.308 Sum_probs=203.7
Q ss_pred HHHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeee----ccceEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRILV 687 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~----~~~~~~lV 687 (935)
..|++.+.||+|+||.||++.. .+|+.||||++........+.+.+|+++++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 3467789999999999999987 479999999987665666778999999999999999999999986 34578999
Q ss_pred EEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 688 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
|||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 99999999999887422 34679999999999999999999998 899999999999999999999999999987643
Q ss_pred ccccc--------eeecccCCccccCCCCCCCCC---CCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhh
Q 002336 767 EDLTH--------ISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 835 (935)
Q Consensus 767 ~~~~~--------~~~~~~gt~~y~APE~l~~~~---~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i 835 (935)
..... ......|++.|+|||.+.... ++.++||||||+++|||++|+.||....... ...... +
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~ 260 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA----V 260 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----h
Confidence 21110 011234799999999987553 6899999999999999999999996321111 111111 1
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 836 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 836 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
... . . ... .......+.+++.+||+.+|++||+++|+++.|+.+..
T Consensus 261 ~~~-~-~---~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 QNQ-L-S---IPQ----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HCC-------CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred hcc-C-C---CCc----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 110 0 0 000 11122468899999999999999999999999987754
No 97
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1e-37 Score=347.45 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=201.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcE----EEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~----vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
.+++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. +...++|
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v 92 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV 92 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence 4566789999999999999875 3443 8888875432 233467889999999999999999999986 4568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 9999999999999743 3568899999999999999999998 8999999999999999999999999999987654
Q ss_pred cccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 768 DLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 768 ~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .+..+.....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~~-- 238 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGERLAQ-- 238 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTCBCCC--
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCCCCCC--
Confidence 3322 2334457889999999988889999999999999999999 999997443321 111 2222211111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
+......+.+++.+||+.+|++||+++|+++.|+++...
T Consensus 239 -------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 -------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111112567899999999999999999999999987653
No 98
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-37 Score=346.58 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=198.7
Q ss_pred HhhcccccccccEEEEEEEE-CCCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|.+.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++......++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 56678999999999999997 4789999999864322 1235789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+ +|+|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++........
T Consensus 91 ~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 91 A-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp C-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred C-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 9 7899888863 4569999999999999999999998 8999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 771 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.....||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||.......... .+..+ .
T Consensus 164 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------~i~~~----------~ 224 (336)
T 3h4j_B 164 --LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------KVNSC----------V 224 (336)
T ss_dssp --TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------CCCSS----------C
T ss_pred --cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------HHHcC----------C
Confidence 233468999999999988765 789999999999999999999997433221100 00000 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
...+......+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01122223467899999999999999999999763
No 99
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-36 Score=332.20 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=206.8
Q ss_pred HHHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceee-eccceEEEEEEe
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEY 690 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~-~~~~~~~lV~E~ 690 (935)
..|++.+.||+|+||.||+|.+ .+++.||||++... ...+.+.+|+++++.++|++++..++.+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc--ccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4567789999999999999987 47899999986543 2335688999999999988888777766 566778999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeeccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~~ 767 (935)
+ +++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||+ ++++.+||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 87 L-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp C-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred c-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9 99999998743 4569999999999999999999998 899999999999999 7899999999999987654
Q ss_pred cccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 768 DLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 768 ~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 239 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI- 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-
Confidence 3221 123456899999999999999999999999999999999999999854443322222222111111110
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 842 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 842 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
+.+...+ ...+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 240 ----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 ----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0011111 2368899999999999999999999999999886544
No 100
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.5e-37 Score=336.70 Aligned_cols=264 Identities=21% Similarity=0.311 Sum_probs=201.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 4677899999999999999874 7999999998742 23445678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 690 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
|+++++|.+++.... ....+++..++.++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999886422 34568999999999999999999998 89999999999999999999999999998765433
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...... .+..+.......
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~-~~~~~~~~~~~~--- 260 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCK-KIEQCDYPPLPS--- 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHH-HHHTTCSCCCCT---
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHH-HhhcccCCCCcc---
Confidence 221 22345899999999999889999999999999999999999999743221 112221 222222211111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
. .....+.+++.+||+.||++||++++|++.|+++......
T Consensus 261 -~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 -D----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -c----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 1 1223688999999999999999999999999998876654
No 101
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=332.41 Aligned_cols=259 Identities=24% Similarity=0.413 Sum_probs=209.2
Q ss_pred hhcc-cccccccEEEEEEEEC---CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 616 NFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 616 ~~~~-~LG~G~fG~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 90 (287)
T 1u59_A 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEM 90 (287)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEe
Confidence 3444 8999999999999864 57889999997643 34567899999999999999999999999 45568999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+++.. ....+++..++.++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 91 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 91 AGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp CTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred CCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999864 34569999999999999999999998 8999999999999999999999999999987644322
Q ss_pred ce--eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 771 HI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 771 ~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..+...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~----~i~~~~~~------ 232 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRM------ 232 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHH----HHHTTCCC------
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHhcCCcC------
Confidence 21 223346889999999988889999999999999999998 99999743321 1222 22222111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCCC
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGD 896 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 896 (935)
..+......+.+++.+||+.+|++||+++|+++.|+++........
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 1112223478899999999999999999999999999887665443
No 102
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.6e-38 Score=373.41 Aligned_cols=259 Identities=27% Similarity=0.434 Sum_probs=210.1
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
...+++.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 34466788999999999999999988899999997543 234679999999999999999999999976 6789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++|+|.+++... ....+++.+++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 344 ~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp TTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred cCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 999999999742 23458999999999999999999998 89999999999999999999999999999876543222
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......++..|+|||.+....++.++||||||+++|||++ |+.||...... .. ...+..+....
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~----~~~i~~~~~~~-------- 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EV----LDQVERGYRMP-------- 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HH----HHHHHTTCCCC--------
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHcCCCCC--------
Confidence 2223446789999999988889999999999999999999 99999743221 11 12222221111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.+......+.+++.+||+.+|++|||+++|++.|+++....
T Consensus 485 -~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred -CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 11222346889999999999999999999999999876543
No 103
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-36 Score=336.81 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=198.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 2h34_A 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR 114 (309)
T ss_dssp CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence 3667889999999999999976 688999999875422 234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 115 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 115 LINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred ecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999974 3568999999999999999999998 899999999999999999999999999998765443
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+...... +
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~----~--- 254 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPR----P--- 254 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCC----G---
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCC----c---
Confidence 33333456899999999999989999999999999999999999999743221 112222221110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHhhhhhhc
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIE 892 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~ev~~~L~~~~~~~ 892 (935)
...+......+.+++.+||+.+|++|| +++++++.|++.....
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 001111223688999999999999999 9999999999876544
No 104
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=339.86 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=196.6
Q ss_pred hhhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhc-CCCcccccceeeeccc
Q 002336 607 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 682 (935)
Q Consensus 607 ~~~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~ 682 (935)
..++....+++.++||+|+||+||+|.+. +|+.||||++.... ......+..|+..+.++ +||||+++++++.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34566677888999999999999999987 79999999976532 23334556666666665 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccc
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 762 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla 762 (935)
..++||||+ +++|.+++... +..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 77999888653 4569999999999999999999998 89999999999999999999999999998
Q ss_pred ccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
........ .....||+.|+|||++.+ .++.++||||||+++|||++|..|+..... | ..+..+...
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~--~~~~~~~~~- 270 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------W--QQLRQGYLP- 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------H--HHHTTTCCC-
T ss_pred eecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------H--HHHhccCCC-
Confidence 77644322 233458999999998876 689999999999999999999776642110 1 112222111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+.+.. .....+.+++.+||+.+|++|||++|+++
T Consensus 271 ---~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111 12246889999999999999999999975
No 105
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=346.14 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=199.0
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCCCCH
Q 002336 618 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876656677899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc--cCCCcEEEeeccccccccccccceee
Q 002336 697 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 774 (935)
Q Consensus 697 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl--d~~~~vkL~DFGla~~~~~~~~~~~~ 774 (935)
.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 174 ~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIIDE--SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 9988642 3568999999999999999999998 899999999999999 5678999999999987654322 22
Q ss_pred cccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCH
Q 002336 775 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 854 (935)
Q Consensus 775 ~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~ 854 (935)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... +......... . .. .+.....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~i~~~~-~-~~-~~~~~~~--- 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA------ETLNNILACR-W-DL-EDEEFQD--- 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTC-C-CS-CSGGGTT---
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcc-C-CC-Chhhhcc---
Confidence 345899999999999889999999999999999999999999743321 1111122111 0 00 0111111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH--HHhhh
Q 002336 855 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS 888 (935)
Q Consensus 855 ~~~~~l~~li~~Cl~~dP~~RPs~~ev~~--~L~~~ 888 (935)
....+.+++.+||+.+|++||+++|+++ .+.+.
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 2236889999999999999999999987 45443
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-37 Score=340.44 Aligned_cols=243 Identities=22% Similarity=0.359 Sum_probs=201.4
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
+++.+.||+|+||.||+++.. +|+.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 566889999999999999886 689999999865322 2345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 88 IEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 999999999974 4568999999999999999999997 89999999999999999999999999999875432
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... +....... +.. .+
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~-~~~------~~-- 222 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILN-AEL------RF-- 222 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHH-CCC------CC--
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-CCC------CC--
Confidence 22356999999999999999999999999999999999999999743221 11111221 111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~ 884 (935)
+......+.+++.+||+.+|++|| +++|+++.
T Consensus 223 --p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 --PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112223688999999999999999 88888753
No 107
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3e-36 Score=329.86 Aligned_cols=263 Identities=23% Similarity=0.318 Sum_probs=207.5
Q ss_pred HHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceee-eccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~-~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|.+ .+|+.||||++.... ..+.+.+|+.+++.++|++++..++++ ......++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 356678999999999999997 478999999986543 235688999999999998877777765 5567789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~~~ 768 (935)
+++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999999743 4569999999999999999999998 899999999999999 48899999999999876543
Q ss_pred ccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 769 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 769 ~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch--
Confidence 321 123456899999999999989999999999999999999999999854433322222222211111110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
+.+...+ ...+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 240 ---~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 ---EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ---HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0111112 2368899999999999999999999999999876554
No 108
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.7e-37 Score=341.94 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=193.0
Q ss_pred HHHhhcccccccccEEEEEEEE----CCCcEEEEEEccCcc----hhhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
..|++.+.||+|+||.||+++. .+|+.||+|+++... ......+.+|+++|+.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4567789999999999999987 478999999987542 22345688899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999873 4568899999999999999999998 8999999999999999999999999999876
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... +....... +..
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~-~~~---- 238 (327)
T 3a62_A 171 SIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILK-CKL---- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHH-TCC----
T ss_pred cccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHh-CCC----
Confidence 433221 223456899999999998888999999999999999999999999743321 11111111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 884 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~ 884 (935)
. .+......+.+++.+||+.+|++|| +++|+++.
T Consensus 239 --~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 --N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1 1112234688999999999999999 77787653
No 109
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.7e-37 Score=336.79 Aligned_cols=263 Identities=30% Similarity=0.540 Sum_probs=197.0
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
|+....+++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++. ....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEE
Confidence 344455677899999999999999875 359999986543 344577999999999999999999999764 456899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999999999643 4668999999999999999999998 899999999999999999999999999997654
Q ss_pred ccc-cceeecccCCccccCCCCCC---CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 767 EDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 767 ~~~-~~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
... ........||+.|+|||.+. +..++.++||||||+++|+|++|+.||...... ... ...+..+....
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~----~~~~~~~~~~~ 245 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQI----IEMVGRGSLSP 245 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHH----HHHHHHTSCCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHH----HHHhcccccCc
Confidence 321 11223346899999999876 567889999999999999999999999743221 112 22222222211
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
... .........+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 246 ~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 DLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred chh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111 1112223478899999999999999999999999998754
No 110
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.5e-37 Score=335.39 Aligned_cols=258 Identities=29% Similarity=0.470 Sum_probs=202.1
Q ss_pred HhhcccccccccEEEEEEEECC----CcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceee-eccceEEEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVY 688 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~-~~~~~~~lV~ 688 (935)
+++.+.||+|+||.||+|.+.+ ...+|+|.+..... ...+.+.+|+.++++++||||+++++++ ..++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4567899999999999998653 23589999875433 3457899999999999999999999986 4556789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++.. ....+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 107 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp ECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999974 34568999999999999999999998 89999999999999999999999999999876443
Q ss_pred cc---ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 769 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 769 ~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
.. .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||...... ..... +..+...
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~----~~~~~~~--- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVY----LLQGRRL--- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHHH----HHTTCCC---
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHHH----HhcCCCC---
Confidence 21 11233457889999999988889999999999999999999 55566532221 11111 1111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.. +......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 252 --~~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 252 --LQ----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp --CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred --CC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 11122368899999999999999999999999999887544
No 111
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.3e-37 Score=331.98 Aligned_cols=256 Identities=24% Similarity=0.381 Sum_probs=206.3
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec-------
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------- 680 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~------- 680 (935)
......|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 445566778899999999999999986 79999999986542 457789999999999999999998754
Q ss_pred ---------cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC
Q 002336 681 ---------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 751 (935)
Q Consensus 681 ---------~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~ 751 (935)
....++||||+++++|.+++... ....+++..++.++.|++.||.|||+ ++|+||||||+|||++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDT 158 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEET
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCC
Confidence 45579999999999999999743 24568999999999999999999998 899999999999999999
Q ss_pred CcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHH
Q 002336 752 MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA 831 (935)
Q Consensus 752 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~ 831 (935)
+.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+... ....
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~ 228 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFF 228 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHH
T ss_pred CCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHH
Confidence 9999999999987654322 22345899999999998888999999999999999999999887411 1111
Q ss_pred HHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCC
Q 002336 832 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 895 (935)
Q Consensus 832 ~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 895 (935)
..+..+.. ...++ ..+.+++.+||+.||++||++.|+++.|+.+....+..
T Consensus 229 -~~~~~~~~--------~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 229 -TDLRDGII--------SDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp -HHHHTTCC--------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred -HHhhcccc--------cccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 11222211 11122 35789999999999999999999999999887655543
No 112
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.1e-37 Score=354.22 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=200.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+++.+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 149 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3455789999999999999986 588999999865321 223458899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++|+|.++++. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 150 ~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 150 YMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 9999999999973 358999999999999999999998 899999999999999999999999999998765543
Q ss_pred cceeecccCCccccCCCCCCCCC----CCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~----~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... ... ...........
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~---~i~~~~~~~~~-- 294 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TYS---KIMNHKNSLTF-- 294 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH---HHHTHHHHCCC--
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh---HHH---HHHhccccccC--
Confidence 33344567999999999986554 7899999999999999999999997433221 111 11110000000
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 884 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~ev~~~ 884 (935)
+ . .......+.+++.+||+.+|++ ||+++||.+.
T Consensus 295 p---~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 P---D--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp C---T--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred C---C--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 0 0011236789999999999988 9999999865
No 113
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.1e-37 Score=339.50 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=189.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4667889999999999999876 689999999865432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
+ |+|.+++.... ....+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 59998876421 23468999999999999999999998 89999999999999999999999999999876433
Q ss_pred ccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC--C-eeec-
Q 002336 769 LTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG--D-VISI- 843 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~--~-~~~~- 843 (935)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+.+..... . ....
T Consensus 162 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 VNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGG
T ss_pred ccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhh
Confidence 221 223458999999998876 468999999999999999999999997443321 111111111100 0 0000
Q ss_pred ----ccccc------------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 844 ----VDPVL------------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 844 ----~d~~l------------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
..+.. ...........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00000112236889999999999999999999875
No 114
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-37 Score=334.80 Aligned_cols=260 Identities=27% Similarity=0.403 Sum_probs=205.0
Q ss_pred hhcccccccccEEEEEEEECC-C---cEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceE-EEEEE
Q 002336 616 NFCKKIGKGSFGSVYYGKMKD-G---KEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVYE 689 (935)
Q Consensus 616 ~~~~~LG~G~fG~Vy~~~~~~-g---~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~-~lV~E 689 (935)
+..+.||+|+||.||+|.+.+ + ..+|+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 345889999999999998642 2 3799999875433 3457899999999999999999999999766655 99999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+.+|+|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 104 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 104 YMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred cccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999975 34678999999999999999999998 899999999999999999999999999998654322
Q ss_pred c---ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccc
Q 002336 770 T---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 846 (935)
Q Consensus 770 ~---~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~ 846 (935)
. .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... ....... +..+....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~----~~~~~~~~---- 248 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHF----LAQGRRLP---- 248 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHH----HHTTCCCC----
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHH----hhcCCCCC----
Confidence 1 122334578899999999999999999999999999999996655432211 1122221 11111100
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCC
Q 002336 847 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 895 (935)
Q Consensus 847 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 895 (935)
.+......+.+++.+||+.+|++|||++|+++.|+++.......
T Consensus 249 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 -----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred -----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 11112246889999999999999999999999999988765543
No 115
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=342.63 Aligned_cols=272 Identities=24% Similarity=0.384 Sum_probs=196.6
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHH--HHhcCCCcccccceeee-----ccceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYCE-----EEHQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~i--L~~L~HpnIv~l~g~~~-----~~~~~~l 686 (935)
.+++.+.||+|+||.||+|++. ++.||||++.... ...+..|.++ +..++||||+++++.+. .....++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HhheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 3566789999999999999874 8999999986432 2344445444 44589999999998543 3346789
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC---------ceEecCCCCCCccccCCCcEEEe
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKVS 757 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~---------~ivH~DLkp~NILld~~~~vkL~ 757 (935)
||||+++|+|.+++.. ...++..+.+++.|+++||+|||+ . +|+||||||+|||++.++.+||+
T Consensus 90 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEe
Confidence 9999999999999974 345889999999999999999997 6 99999999999999999999999
Q ss_pred ecccccccccccc-------ceeecccCCccccCCCCCCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCccCccc
Q 002336 758 DFGLSRQAEEDLT-------HISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 823 (935)
Q Consensus 758 DFGla~~~~~~~~-------~~~~~~~gt~~y~APE~l~~-------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~ 823 (935)
|||+++....... .......||+.|+|||++.+ ..++.++||||||+++|||++|..|+.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987543211 11223468999999999876 456679999999999999999977764222211
Q ss_pred c-hh----------HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 824 E-LN----------IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 824 ~-~~----------l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
. .. .................+.... .........+.+++.+||+.||++|||++|+++.|++++..-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1 00 0011111111111111111111 112235567999999999999999999999999999988765
Q ss_pred cCCCCC
Q 002336 893 KGGDQK 898 (935)
Q Consensus 893 ~~~~~~ 898 (935)
.+....
T Consensus 321 ~~~~~~ 326 (336)
T 3g2f_A 321 ERNKSV 326 (336)
T ss_dssp CC----
T ss_pred HhcccC
Confidence 554433
No 116
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=348.85 Aligned_cols=271 Identities=22% Similarity=0.309 Sum_probs=212.1
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccc--eEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~--~~~lV~E~ 690 (935)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 556789999999999999886 589999999875432 33467889999999999999999999987655 77999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc----cCCCcEEEeecccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl----d~~~~vkL~DFGla~~~~ 766 (935)
+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999865444559999999999999999999998 899999999999999 778889999999998765
Q ss_pred ccccceeecccCCccccCCCCCCC--------CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 838 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~--------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~ 838 (935)
.... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ..+.+...+...
T Consensus 168 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~ 243 (396)
T 4eut_A 168 DDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGK 243 (396)
T ss_dssp CGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSC
T ss_pred CCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCC
Confidence 4322 223458999999998754 4677899999999999999999999964332211 111222222211
Q ss_pred C---eeecc-----------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 839 D---VISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 839 ~---~~~~~-----------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
. ..... +..............+.+++.+||+.||++||+++|+++.+++++...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 1 10000 001112334567778899999999999999999999999998877643
No 117
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.7e-36 Score=328.88 Aligned_cols=249 Identities=20% Similarity=0.273 Sum_probs=202.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
..|.+.+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45777899999999999999876 57799999987665556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~~~ 768 (935)
++++|.+.+.. ...+++..+..++.|+++||+|||+ ++|+||||||+||++ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 89 TGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999998873 4568999999999999999999998 899999999999999 78899999999999876543
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.. .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||....... . ...+..+.... ....
T Consensus 163 ~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~----~~~~~~~~~~~--~~~~ 230 (277)
T 3f3z_A 163 KM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE---V----MLKIREGTFTF--PEKD 230 (277)
T ss_dssp SC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---H----HHHHHHCCCCC--CHHH
T ss_pred cc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH---H----HHHHHhCCCCC--Cchh
Confidence 22 2334689999999988664 8999999999999999999999997433211 1 11122221100 0000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.. .....+.+++.+||+.+|++||++.|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 231 WL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 11246889999999999999999999975
No 118
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5e-37 Score=339.56 Aligned_cols=259 Identities=24% Similarity=0.372 Sum_probs=195.2
Q ss_pred HHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccce----EE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----RI 685 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~----~~ 685 (935)
.|++.+.||+|+||.||+|.+ .+++.||||++.... ......+.+|++++++++||||+++++++..... .+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 466789999999999999987 478999999987542 2334678999999999999999999999876543 49
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+++++|.+++.. ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 93 lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999973 4568999999999999999999998 89999999999999999999999999999875
Q ss_pred cccccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 766 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 766 ~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~- 239 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPP- 239 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCH-
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCCc-
Confidence 443221 122345899999999999889999999999999999999999999743221 11112222211110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-HHHHHhhhhhh
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-IVLAIQDSIKI 891 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-v~~~L~~~~~~ 891 (935)
.... ......+.+++.+||+.||++||+..+ +...|......
T Consensus 240 --~~~~----~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 240 --SARH----EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp --HHHS----TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred --cccc----CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 0000 112236889999999999999996555 44555555443
No 119
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-37 Score=347.38 Aligned_cols=245 Identities=24% Similarity=0.369 Sum_probs=199.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+.+.+.||+|+||.||+|+++ +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+..++||
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 3566889999999999999986 68999999987532 22345678899999887 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 98 EYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999974 3568999999999999999999998 89999999999999999999999999999864322
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. .+. ..+..+.. .+
T Consensus 172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~----~~i~~~~~------~~ 237 (345)
T 1xjd_A 172 DA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELF----HSIRMDNP------FY 237 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHCCC------CC
T ss_pred CC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHH----HHHHhCCC------CC
Confidence 21 233456999999999999989999999999999999999999999743321 111 11222211 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 882 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~-ev~ 882 (935)
+......+.+++.+||+.+|++||++. |+.
T Consensus 238 ----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 ----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111223678999999999999999997 654
No 120
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=337.74 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=197.0
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence 456789999999999999986 589999998865433 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++++|.+++. ....+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 85 DHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp SEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999887 34568999999999999999999998 89999999999999999999999999999876533222
Q ss_pred eeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh-----------cCC
Q 002336 772 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK-----------KGD 839 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~-----------~~~ 839 (935)
.....|++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+.... +..... ...
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 159 -YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL---IRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCSCCHHHHHHHHTCG
T ss_pred -cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhccccccccccccccc
Confidence 223458999999998865 6789999999999999999999999975443222111 111110 000
Q ss_pred ee---ecccccccCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 840 VI---SIVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 840 ~~---~~~d~~l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.. ...++.-... ........+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 0000000000 001123368899999999999999999999864
No 121
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=352.30 Aligned_cols=253 Identities=24% Similarity=0.251 Sum_probs=200.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+++.+.||+|+||.||+++++ +|+.||+|++.... ....+.+.+|..++..++||||+++++++.+.+..++|||
T Consensus 62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE 141 (412)
T 2vd5_A 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141 (412)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEc
Confidence 3455789999999999999986 69999999986532 1233568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++|+|.+++... +..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++......
T Consensus 142 ~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 142 YYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp CCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 99999999999742 3468999999999999999999998 899999999999999999999999999998765443
Q ss_pred cceeecccCCccccCCCCCC-------CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 770 THISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~-------~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+ ....+......-..
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~~~~i~~~~~~~~~-- 291 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE---TYGKIVHYKEHLSL-- 291 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTHHHHCCC--
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH---HHHHHHhcccCcCC--
Confidence 33334457999999999886 4578999999999999999999999997433221 11111100000000
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVLA 884 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R---Ps~~ev~~~ 884 (935)
+..... ....+.+++.+||. +|++| |+++|+.+.
T Consensus 292 ---p~~~~~----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ---PLVDEG----VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---C----C----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---CccccC----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 111111 22367899999999 99998 689998754
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=342.70 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=186.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||+|.+. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 4566889999999999999987 58899999987542 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeeccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFGla~~~~~~~ 769 (935)
+|+|.+++.. ...+++.+++.++.|+++||.|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 132 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 132 GGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp SCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999873 4568999999999999999999998 89999999999999975 8899999999998654322
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+..+... ...+
T Consensus 206 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~~~-~~~~--- 273 (349)
T 2w4o_A 206 L--MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCEYY-FISP--- 273 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTCCC-CCTT---
T ss_pred c--cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCCCc-cCCc---
Confidence 1 233468999999999999899999999999999999999999996332211 111122222111 0111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
........+.+++.+||+.||++|||++|+++
T Consensus 274 --~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 --WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11122346889999999999999999999876
No 123
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-37 Score=342.69 Aligned_cols=261 Identities=29% Similarity=0.482 Sum_probs=203.3
Q ss_pred HHHHhhcccccccccEEEEEEEECC-----CcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~-----g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
...+.+.+.||+|+||.||+|.+.. +..||+|+++... ......+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3445567899999999999998753 2469999987543 334567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999999753 4568999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 766 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 766 ~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... ..+..+....
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~----~~~~~~~~~~ 270 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVM----KAINDGFRLP 270 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHH----HHHHTTCCCC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHH----HHHHCCCcCC
Confidence 543221 1122345788999999988899999999999999999999 99999633221 111 1222221100
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.+......+.+++.+||+.+|++||++.|+++.|+++.....
T Consensus 271 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 271 ---------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ---------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 111223468899999999999999999999999998876443
No 124
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=341.93 Aligned_cols=268 Identities=20% Similarity=0.203 Sum_probs=199.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcchh-----------hhHHHHHHHHHHHhcCCCccccc
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVPL 674 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~E~~iL~~L~HpnIv~l 674 (935)
+....|.+.+.||+|+||.||+|.+. .+..+|+|++...... ....+.+|+..++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 33345677899999999999999986 5788999998754321 12346788999999999999999
Q ss_pred ceeeec----cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC
Q 002336 675 IGYCEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 750 (935)
Q Consensus 675 ~g~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~ 750 (935)
++++.. ....++||||+ +++|.+++... ..+++..++.++.|+++||+|||+ ++|+||||||+|||++.
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 999877 67899999999 99999999743 379999999999999999999998 89999999999999998
Q ss_pred CC--cEEEeeccccccccccccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcc
Q 002336 751 NM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 822 (935)
Q Consensus 751 ~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~ 822 (935)
++ .+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 77 9999999999876433211 113346899999999999889999999999999999999999999632221
Q ss_pred cchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 823 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 823 ~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
. ............. ....+..... .......+.+++.+||+.+|++||++++|++.|++...
T Consensus 267 -~-~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 -P-VAVQTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp -H-HHHHHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred -c-HHHHHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1 1111111111111 1111100000 00122368899999999999999999999999987654
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.2e-36 Score=334.62 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=204.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh------hhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
...|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456778999999999999999886 6899999998654321 246799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC----cEEEeecc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 760 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~----~vkL~DFG 760 (935)
++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999973 4568999999999999999999998 8999999999999999888 79999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
++........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... +.... +.....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~-i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLAN-ITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHH-HHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHH-HHhccc
Confidence 9987654322 22345899999999999889999999999999999999999999743221 11111 111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
..++...... ...+.+++.+||+.||++|||++|+++
T Consensus 236 --~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111111111 236889999999999999999999986
No 126
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.3e-36 Score=326.09 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=202.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45677899999999999999886 68999999986432 23457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+++. ....+++..+..++.|+++||+|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 34579999999999999999999998 8999999999999999999999999999976543221
Q ss_pred -ceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 771 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 771 -~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ......|.. .... ..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~----~~~~---~~~-- 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKE----KKTY---LNP-- 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-SHHHHHHHT----TCTT---STT--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHhhh----cccc---cCc--
Confidence 12234568999999999987665 78999999999999999999999743322 112222211 1000 000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.......+.+++.+||+.+|++|||++|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0112236789999999999999999999875
No 127
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=329.03 Aligned_cols=246 Identities=27% Similarity=0.424 Sum_probs=180.5
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh---hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH---RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 566789999999999999874 7999999998643221 236789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 93 CHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 9999999999742 3568999999999999999999998 8999999999999999999999999999987543222
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......... .... .. +...
T Consensus 168 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~-~~------~~~~-- 231 (278)
T 3cok_A 168 K-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVV-LA------DYEM-- 231 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC-SS------CCCC--
T ss_pred c-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHh-hc------ccCC--
Confidence 1 22345899999999999888999999999999999999999999743322110 0000 00 0111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.||++||+++++++
T Consensus 232 --~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 --PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1122346789999999999999999999875
No 128
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=341.20 Aligned_cols=264 Identities=16% Similarity=0.197 Sum_probs=205.6
Q ss_pred HHhhcccccccccEEEEEEEECC---------CcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccc-----------
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVP----------- 673 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~----------- 673 (935)
.|.+.+.||+|+||.||+|.+.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45678899999999999998864 789999998643 46889999999999999998
Q ss_pred ----cceeeec-cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc
Q 002336 674 ----LIGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 748 (935)
Q Consensus 674 ----l~g~~~~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl 748 (935)
+++++.. ....++||||+ +++|.+++... ....+++..++.++.|+++||+|||+ ++|+||||||+|||+
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFV 192 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEE
Confidence 5666655 67889999999 99999999853 23679999999999999999999998 899999999999999
Q ss_pred cCCC--cEEEeeccccccccccccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccC
Q 002336 749 DINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 820 (935)
Q Consensus 749 d~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~ 820 (935)
+.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 8999999999876543221 1133468999999999999899999999999999999999999997443
Q ss_pred cccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 821 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 821 ~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.. ............. ......+..... ......+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 273 ~~-~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 273 PN-TEDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TC-HHHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cC-HHHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 22 1122222221111 111111111100 0112368899999999999999999999999999886554
No 129
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9.7e-37 Score=343.37 Aligned_cols=244 Identities=23% Similarity=0.286 Sum_probs=201.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+++.+.||+|+||.||++++. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 3556789999999999999986 689999999865322 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999974 3568999999999999999999998 999999999999999999999999999998764432
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.. ..+..+.. .+
T Consensus 196 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~-~~i~~~~~------~~- 257 (350)
T 1rdq_E 196 ----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIY-EKIVSGKV------RF- 257 (350)
T ss_dssp ----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHCCC------CC-
T ss_pred ----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHH-HHHHcCCC------CC-
Confidence 2346899999999999989999999999999999999999999743221 111 12222221 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVLA 884 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~ev~~~ 884 (935)
+......+.+++.+||+.||++||+ ++||.+.
T Consensus 258 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1122346889999999999999998 8887653
No 130
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.4e-37 Score=337.50 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=209.8
Q ss_pred HHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeeccc-
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH- 682 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~- 682 (935)
...+++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 34566789999999999999975 2468899999876433 3456799999999999 7999999999987654
Q ss_pred eEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 749 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld 749 (935)
..++||||+++++|.+++..... ...+++..++.++.|+++||.|||+ ++|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEEC
Confidence 58999999999999999985432 2238899999999999999999998 8999999999999999
Q ss_pred CCCcEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhH
Q 002336 750 INMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 827 (935)
Q Consensus 750 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l 827 (935)
.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~ 260 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF 260 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HH
Confidence 9999999999999875443222 2233457889999999988889999999999999999998 999997433221 11
Q ss_pred HHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 828 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 828 ~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
. ..+..+.... . +......+.+++.+||+.+|++|||++|+++.|++++....
T Consensus 261 ~----~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 261 C----RRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp H----HHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H----HHhccCccCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1 1222221111 1 11122368899999999999999999999999999886543
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=342.72 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=193.9
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCC--CcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~H--pnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|++.+.||+|+||.||++...+++.||||++... .....+.+.+|+.+|++++| |||+++++++......++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 5668899999999999999988999999998643 23345778999999999976 999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+.+++|.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+|||++ ++.+||+|||+++.......
T Consensus 90 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 90 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 568899999984 4678999999999999999999998 8999999999999997 67899999999987654322
Q ss_pred c-eeecccCCccccCCCCCCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC
Q 002336 771 H-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 838 (935)
Q Consensus 771 ~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~ 838 (935)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........+.
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~-- 235 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIID-- 235 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHC--
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHhc--
Confidence 2 2234569999999998743 6789999999999999999999999973211 1111112221
Q ss_pred CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 839 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 839 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+......+......+.+++.+||+.||++|||++|+++.
T Consensus 236 -------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 236 -------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111111222222468899999999999999999999865
No 132
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-38 Score=348.26 Aligned_cols=262 Identities=26% Similarity=0.418 Sum_probs=187.7
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHh--cCCCcccccceeeeccc----eEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~--L~HpnIv~l~g~~~~~~----~~~lV 687 (935)
.|.+.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 3566789999999999999886 899999998643 34567788888887 78999999999998766 78999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh--------hcCCCceEecCCCCCCccccCCCcEEEeec
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 759 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------s~~~~~ivH~DLkp~NILld~~~~vkL~DF 759 (935)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999963 35788889999999999999999 6 89999999999999999999999999
Q ss_pred cccccccccccce---eecccCCccccCCCCCCCC------CCCchhHHHHHHHHHHHHHhC----------CCCCCccC
Q 002336 760 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 820 (935)
Q Consensus 760 Gla~~~~~~~~~~---~~~~~gt~~y~APE~l~~~------~~s~ksDVwS~Gvil~eLltG----------~~Pf~~~~ 820 (935)
|+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2233689999999998765 444789999999999999999 66664221
Q ss_pred cccchhHHHHHHHhhhcCCeeecccccccCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 821 FGAELNIVHWARSMIKKGDVISIVDPVLIGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 821 ~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
... ....... ..+..... .+.....+ ..+....+.+++.+||+.||++|||++||++.|+++...+
T Consensus 233 ~~~-~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSD-PSVEEMR-KVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-C-CCCC-CH-HHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCC-ccHHHHH-HHHHHhhc----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 110 0000001 11111111 11111111 2256678999999999999999999999999999887654
No 133
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=339.85 Aligned_cols=266 Identities=28% Similarity=0.438 Sum_probs=210.3
Q ss_pred HHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc--eE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~--~~ 684 (935)
...+++.+.||+|+||.||++++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34466789999999999999984 368899999998766666788999999999999999999999886544 68
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999999753 3568999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccce--eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcc---------cchhHHHHHHH
Q 002336 765 AEEDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 833 (935)
Q Consensus 765 ~~~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~---------~~~~l~~~~~~ 833 (935)
........ .....++..|+|||.+.+..++.++||||||+++|||++|..|+...... ........+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 65433221 22334677899999998888899999999999999999999998632110 00111111222
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
.+..+... ..+......+.+++.+||+.+|++||+++||++.|+++...
T Consensus 275 ~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22222111 11122234688999999999999999999999999987653
No 134
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=337.88 Aligned_cols=265 Identities=24% Similarity=0.287 Sum_probs=197.3
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-----hhhHHHHHHHHHHHhcC---CCcccccceeee
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-----HRTQQFVTEVALLSRIH---HRNLVPLIGYCE 679 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-----~~~~~~~~E~~iL~~L~---HpnIv~l~g~~~ 679 (935)
++....|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 444556778899999999999999974 689999999864321 11245677888777764 999999999987
Q ss_pred ccc-----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcE
Q 002336 680 EEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA 754 (935)
Q Consensus 680 ~~~-----~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~v 754 (935)
... ..++||||+. ++|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCE
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCE
Confidence 654 5789999997 6999998854 23449999999999999999999998 899999999999999999999
Q ss_pred EEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHh
Q 002336 755 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 834 (935)
Q Consensus 755 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 834 (935)
||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+...
T Consensus 160 kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~ 234 (308)
T 3g33_A 160 KLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDL 234 (308)
T ss_dssp EECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHH
T ss_pred EEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHH
Confidence 9999999987643322 234568999999999988889999999999999999999999997433221 11111111
Q ss_pred hhcC---Ceeecc---cccccC-------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 835 IKKG---DVISIV---DPVLIG-------NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 835 i~~~---~~~~~~---d~~l~~-------~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+... ...... ...+.. ....+....+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1110 000000 000000 001122346889999999999999999999875
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-36 Score=330.51 Aligned_cols=243 Identities=24% Similarity=0.358 Sum_probs=178.1
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 556789999999999999865 689999999875422 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+ +++|.+.+.. ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++........
T Consensus 95 ~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 95 A-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp C-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred c-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 9 6788887763 4569999999999999999999998 8999999999999999999999999999976544322
Q ss_pred ceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 771 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... . ...+..+.. .+
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~----~~~~~~~~~------~~- 231 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---L----FKNISNGVY------TL- 231 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---H----HHHHHHTCC------CC-
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---H----HHHHHhCCC------CC-
Confidence 223458999999999887655 789999999999999999999997433211 1 111222211 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.||++|||++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 ---PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1112236789999999999999999999965
No 136
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-36 Score=330.71 Aligned_cols=244 Identities=26% Similarity=0.412 Sum_probs=197.6
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 566789999999999999876 577999999864322 1245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~- 163 (279)
T 3fdn_A 91 APLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163 (279)
T ss_dssp CTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence 999999999874 3568999999999999999999997 899999999999999999999999999986543322
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .. ..+.....
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~----~~~~~~~~---------- 224 (279)
T 3fdn_A 164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TY----KRISRVEF---------- 224 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH----HHHHHTCC----------
T ss_pred --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH---HH----HHHHhCCC----------
Confidence 223468999999999999899999999999999999999999997433211 11 11111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+......+.+++.+||+.+|++||+++|+++.
T Consensus 225 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111223467899999999999999999999864
No 137
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=343.77 Aligned_cols=258 Identities=23% Similarity=0.402 Sum_probs=199.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCc----EEEEEEccCc-chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~----~vAvK~~~~~-~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
..|++.+.||+|+||.||+|.+. +++ .||+|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 44667889999999999999875 444 3577777543 2334578999999999999999999999998765 789
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
|+|++.+|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999998753 4568999999999999999999998 899999999999999999999999999998764
Q ss_pred ccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 767 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 767 ~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +.. .+..+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~~~~~~~~~-- 239 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERLP-- 239 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCCC--
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHHcCCCCC--
Confidence 33221 1223346788999999988899999999999999999999 999997443322 111 122221111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
.+......+.+++.+||+.+|++||+++|+++.|+++....
T Consensus 240 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 240 -------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 11122336889999999999999999999999999887543
No 138
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.4e-36 Score=330.61 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=201.6
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
...|.+.+.||+|+||.||++... +|+.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456778899999999999999886 7899999999865544556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeeccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~~ 767 (935)
+++++|.+.+.. ...+++..+..++.|++.||.|||+ .+|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999998863 3568999999999999999999998 899999999999999 7889999999999876443
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
.. .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... ... ..+..+... ....
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~----~~i~~~~~~--~~~~ 229 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLF----EKIKEGYYE--FESP 229 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH----HHHHHCCCC--CCTT
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHH----HHHHcCCCC--CCcc
Confidence 21 12345899999999999999999999999999999999999999743221 111 122222110 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. .......+.+++.+||+.||++||+++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 F----WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1122346889999999999999999999976
No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3e-37 Score=342.43 Aligned_cols=261 Identities=24% Similarity=0.418 Sum_probs=209.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
...|++.+.||+|+||.||+|.+. .++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 345677899999999999999765 367899999875433 3456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCC-------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEe
Q 002336 685 ILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 757 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~ 757 (935)
++||||+++|+|.+++.... ....+++..+++++.|+++||.|||+ ++|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987421 12457899999999999999999998 899999999999999999999999
Q ss_pred eccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhh
Q 002336 758 DFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 835 (935)
Q Consensus 758 DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i 835 (935)
|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .. ...+
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~----~~~~ 253 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---QV----LRFV 253 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---HH----HHHH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---HH----HHHH
Confidence 99999865433221 1222346889999999988889999999999999999999 89998743221 11 1122
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 836 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 836 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
..+.... .+......+.+++.+||+.+|++|||++|+++.|++....
T Consensus 254 ~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 254 MEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 2222111 1112234688999999999999999999999999987653
No 140
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-37 Score=346.60 Aligned_cols=260 Identities=29% Similarity=0.464 Sum_probs=197.0
Q ss_pred HhhcccccccccEEEEEEEEC--CC--cEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeee-ccceEEEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK--DG--KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 688 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~--~g--~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~-~~~~~~lV~ 688 (935)
+++.+.||+|+||.||+|.+. ++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 445688999999999999864 22 368999986533 345678999999999999999999999875 456789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999742 4568899999999999999999998 89999999999999999999999999999865432
Q ss_pred ccc---eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 769 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 769 ~~~---~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .... +..+... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~----~~~~~~~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY----LLQGRRL--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH----HHTTCCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH----HHcCCCC--C
Confidence 211 1223447789999999988899999999999999999999 677776433221 2221 1122110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccCC
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 895 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 895 (935)
. +......+.+++.+||+.+|++||+++|+++.|+++.......
T Consensus 317 ~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 317 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 1 1122346889999999999999999999999999988755533
No 141
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.3e-37 Score=343.79 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=200.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV 687 (935)
..+++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 34667889999999999999987 47899999987542 22345688899999988 799999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++|+|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999974 3568999999999999999999998 8999999999999999999999999999986432
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+. . .+..+.. .
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~---~-~i~~~~~------~ 239 (353)
T 2i0e_A 174 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELF---Q-SIMEHNV------A 239 (353)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---H-HHHHCCC------C
T ss_pred CCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HHH---H-HHHhCCC------C
Confidence 221 233456999999999999999999999999999999999999999743221 111 1 1212211 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVLA 884 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~ev~~~ 884 (935)
++......+.+++.+||+.+|++||+ ++|+.+.
T Consensus 240 ----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 ----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122346889999999999999995 5666543
No 142
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.4e-37 Score=346.17 Aligned_cols=200 Identities=26% Similarity=0.329 Sum_probs=174.6
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-----CCcccccceeeeccceE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-----HpnIv~l~g~~~~~~~~ 684 (935)
....|.+.+.||+|+||.||+|.+. +++.||||++... ....+.+..|+.+++.++ ||||+++++++...+..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 3456777899999999999999885 6899999998743 344567788999999996 99999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC--------------
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-------------- 750 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~-------------- 750 (935)
++||||+ +++|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+|||++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred EEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhccc
Confidence 9999999 99999999754 23468999999999999999999998 89999999999999975
Q ss_pred -----------CCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCcc
Q 002336 751 -----------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVE 819 (935)
Q Consensus 751 -----------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~ 819 (935)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 7889999999998654322 2346899999999999999999999999999999999999999754
Q ss_pred C
Q 002336 820 D 820 (935)
Q Consensus 820 ~ 820 (935)
.
T Consensus 263 ~ 263 (360)
T 3llt_A 263 E 263 (360)
T ss_dssp S
T ss_pred c
Confidence 3
No 143
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-36 Score=338.98 Aligned_cols=256 Identities=25% Similarity=0.293 Sum_probs=197.4
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc-----chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~-----~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
...|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 455777899999999999999875 6889999998643 2234568999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC-------------------------------------CCCCCCHHHHHHHHHHHHHHhHHh
Q 002336 686 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 728 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~-------------------------------------~~~~l~~~~~~~i~~qia~gL~yL 728 (935)
+||||+++|+|.+++.... ....+++..+..++.|+++||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985211 012245777889999999999999
Q ss_pred hhcCCCceEecCCCCCCccccCCC--cEEEeecccccccccccc---ceeecccCCccccCCCCCCC--CCCCchhHHHH
Q 002336 729 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDLT---HISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 801 (935)
Q Consensus 729 Hs~~~~~ivH~DLkp~NILld~~~--~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwS 801 (935)
|+ ++|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 98 8999999999999998776 899999999986543211 12234568999999998865 67899999999
Q ss_pred HHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 002336 802 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 881 (935)
Q Consensus 802 ~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 881 (935)
||+++|||++|+.||...... +........... ...+. .......+.+++.+||+.+|++||++.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLC--FENPN-----YNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC--TTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccc--cCCcc-----cccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999743321 111122221110 00110 01123468899999999999999999999
Q ss_pred HH
Q 002336 882 VL 883 (935)
Q Consensus 882 ~~ 883 (935)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 76
No 144
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.4e-37 Score=345.00 Aligned_cols=264 Identities=26% Similarity=0.411 Sum_probs=209.9
Q ss_pred HHHHhhcccccccccEEEEEEEECC------CcEEEEEEccCcch-hhhHHHHHHHHHHHhc-CCCcccccceeeeccce
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~~------g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~ 683 (935)
...+.+.+.||+|+||.||+|.+.. ++.||+|++..... ...+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3456678999999999999998752 24799999876433 3456799999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC-----------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC
Q 002336 684 RILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 752 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~ 752 (935)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCC
Confidence 999999999999999986421 13468999999999999999999998 8999999999999999999
Q ss_pred cEEEeeccccccccccccc-eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHH
Q 002336 753 RAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHW 830 (935)
Q Consensus 753 ~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~ 830 (935)
.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~- 278 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK- 278 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH-
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH-
Confidence 9999999999865443222 2233456889999999988889999999999999999999 999997433221 1112
Q ss_pred HHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 831 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 831 ~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.+..+.. .. .+......+.+++.+||+.+|++|||++||++.|+++.....
T Consensus 279 ---~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 279 ---LVKDGYQ-----MA----QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp ---HHHHTCC-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---HHhcCCC-----CC----CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 1211111 00 111123468899999999999999999999999998776543
No 145
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-36 Score=336.47 Aligned_cols=262 Identities=26% Similarity=0.429 Sum_probs=198.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccc---
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--- 682 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~----~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~--- 682 (935)
...+.+.+.||+|+||.||+|.+. .++.||+|++... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 345667889999999999999764 3458999998754 2334567999999999999999999999987654
Q ss_pred --eEEEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEe
Q 002336 683 --QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 757 (935)
Q Consensus 683 --~~~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~ 757 (935)
..++||||+++|+|.+++.... ....+++..++.++.|+++||.|||+ ++|+||||||+|||++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEe
Confidence 3499999999999999984321 34679999999999999999999998 899999999999999999999999
Q ss_pred ecccccccccccc-ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhh
Q 002336 758 DFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 835 (935)
Q Consensus 758 DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i 835 (935)
|||+++....... .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... ..... +
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~----~ 262 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMYDY----L 262 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----H
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHHHH----H
Confidence 9999986543321 11223457889999999988899999999999999999999 88998743322 12221 1
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 836 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 836 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
..+.... . +......+.+++.+||+.+|++||+++++++.|+++....
T Consensus 263 ~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 LHGHRLK-----Q----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HTTCCCC-----C----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HcCCCCC-----C----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111111 1 1122346889999999999999999999999999887643
No 146
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=365.23 Aligned_cols=253 Identities=25% Similarity=0.426 Sum_probs=202.4
Q ss_pred cccccccEEEEEEEEC---CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCCCC
Q 002336 620 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 695 (935)
Q Consensus 620 ~LG~G~fG~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 695 (935)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 46679999997643 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce--e
Q 002336 696 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI--S 773 (935)
Q Consensus 696 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~--~ 773 (935)
|.+++... ...+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++......... .
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999743 4569999999999999999999998 899999999999999999999999999998764332211 1
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ... ..+..+.... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~----~~i~~~~~~~---------~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVM----AFIEQGKRME---------C 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHH----HHHHTTCCCC---------C
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHH----HHHHcCCCCC---------C
Confidence 22335689999999988899999999999999999998 99999743321 122 2233332111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
+......+.+++.+||+.+|++||++++|++.|+.+......
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 222334788999999999999999999999999987665443
No 147
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.2e-36 Score=328.87 Aligned_cols=257 Identities=24% Similarity=0.305 Sum_probs=203.6
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh------hhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
...|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356778899999999999999987 6899999998653221 246799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC----cEEEeecc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 760 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~----~vkL~DFG 760 (935)
++||||+++++|.+++.. ...+++..+..++.|+++||.|||+ ++++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999973 4568999999999999999999998 8999999999999998877 89999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... . .. .+.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~-~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE---T---LT-NISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HH-HHHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH---H---HH-HhHhccc
Confidence 9987644322 223458999999999998899999999999999999999999997433211 1 11 1111111
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHhhhh
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSI 889 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~--~L~~~~ 889 (935)
. ..+.... .....+.+++.+||+.+|++||+++|+++ .++++.
T Consensus 229 ~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 D--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp C--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred C--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0 0111111 11236889999999999999999999987 355443
No 148
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-36 Score=332.40 Aligned_cols=258 Identities=26% Similarity=0.428 Sum_probs=204.7
Q ss_pred HHhhcc-cccccccEEEEEEEEC---CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 614 TNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 614 ~~~~~~-~LG~G~fG~Vy~~~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
.+.+.+ .||+|+||.||+|.+. .++.||||++..... ...+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 345555 8999999999999653 468899999875432 2356799999999999999999999999 55678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++++|.+++.. ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999974 4568999999999999999999998 8999999999999999999999999999987654
Q ss_pred cccce--eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 768 DLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 768 ~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
..... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... .. ...+..+....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~----~~~~~~~~~~~-- 240 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EV----TAMLEKGERMG-- 240 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HH----HHHHHTTCCCC--
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HH----HHHHHcCCCCC--
Confidence 33221 122346788999999988888999999999999999999 99999743221 11 12222222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhccC
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 894 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 894 (935)
.+......+.+++.+||+.||++||++.|+++.|+++......
T Consensus 241 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 241 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 1122234688999999999999999999999999998765543
No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-36 Score=328.44 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=196.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
..|.+.+.||+|+||.||++... +++.+|+|++..... ...+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46778899999999999999875 689999999865432 2457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeecccccccc
Q 002336 691 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 691 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~ 766 (935)
+++|+|.+.+.... ....+++..+..++.|+++||+|||+ ++|+||||||+|||+ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999885321 34679999999999999999999998 899999999999999 456889999999998654
Q ss_pred ccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccc
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 846 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~ 846 (935)
.... .....|++.|+|||.+. ..++.++||||||+++|||++|+.||....... ... ............
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~----~~~~~~~~~~~~- 247 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQ----KATYKEPNYAVE- 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCCCCCC--
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHh----hhccCCcccccc-
Confidence 4322 23346899999999876 468999999999999999999999997433221 111 111111100000
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 847 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 847 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
... ....+.+++.+||+.||++|||++|+++
T Consensus 248 --~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 --CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1236789999999999999999999975
No 150
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-37 Score=342.68 Aligned_cols=263 Identities=30% Similarity=0.494 Sum_probs=206.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcE--EEEEEccCcc-hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceE
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~--vAvK~~~~~~-~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~ 684 (935)
+....+++.+.||+|+||.||+|.+. +++. +|+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 33455677899999999999999875 4654 4999886532 33456799999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC
Q 002336 685 ILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 751 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~ 751 (935)
++||||+++++|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCC
Confidence 99999999999999997532 23478999999999999999999998 899999999999999999
Q ss_pred CcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHH
Q 002336 752 MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHW 830 (935)
Q Consensus 752 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~ 830 (935)
+.+||+|||+++....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... +
T Consensus 179 ~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~- 249 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------E- 249 (327)
T ss_dssp GCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------H-
T ss_pred CeEEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------H-
Confidence 9999999999875432211 222346889999999988889999999999999999998 99999743221 1
Q ss_pred HHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 831 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 831 ~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
....+..+.. . ..+......+.+++.+||+.+|++||+++|+++.|+++.....
T Consensus 250 ~~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 250 LYEKLPQGYR-----L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HHHHGGGTCC-----C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HHHHhhcCCC-----C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1112222211 0 1111223468899999999999999999999999998887543
No 151
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.3e-36 Score=341.17 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=199.6
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
...|++.+.||+|+||.||++.++ +|+.||+|++.... ....+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 345777899999999999999886 68899999986542 2345788888888 79999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC----CcEEEeeccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 765 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~----~~vkL~DFGla~~~ 765 (935)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||+.++ +.+||+|||+++..
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999873 4579999999999999999999998 899999999999998432 35999999999876
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........+. ..+..+...
T Consensus 171 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~----~~i~~~~~~---- 241 (342)
T 2qr7_A 171 RAENGL-LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL----ARIGSGKFS---- 241 (342)
T ss_dssp BCTTCC-BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH----HHHHHCCCC----
T ss_pred cCCCCc-eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH----HHHccCCcc----
Confidence 443222 23346899999999998877899999999999999999999999743322222222 222222221
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+...........+.+++.+||+.||++||+++|+++
T Consensus 242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346889999999999999999999876
No 152
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-36 Score=342.27 Aligned_cols=251 Identities=23% Similarity=0.286 Sum_probs=191.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||++... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 4667899999999999999986 78999999987543 234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc--EEEeecccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~--vkL~DFGla~~~~~~~~ 770 (935)
+|+|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++. +||+|||+++......
T Consensus 100 ~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 100 GGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999873 4569999999999999999999998 89999999999999987765 9999999987532221
Q ss_pred ceeecccCCccccCCCCCCCCCCCch-hHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~k-sDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
......||+.|+|||++.+..+..+ +||||+||++|+|++|+.||....... ............ ... +.
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~-~~~------~~ 242 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSV-KYS------IP 242 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTT-CCC------CC
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcC-CCC------CC
Confidence 1233468999999999877777655 899999999999999999997443322 122222222211 110 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
. .......+.+++.+||+.+|++|||++|+++.
T Consensus 243 ~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 D--DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp T--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 00112367899999999999999999999864
No 153
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.2e-37 Score=334.98 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=198.2
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec-cceEEEEEEec
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVYEYM 691 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~-~~~~~lV~E~~ 691 (935)
..+++.+.||+|+||.||+|++. |+.||+|+++... ..+.+.+|++++++++||||+++++++.+ .+..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 34667899999999999999986 8999999987542 45679999999999999999999998754 45789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
++++|.+++... ....+++..++.++.|+++||+|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 98 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999998742 12237899999999999999999998 899999999999999999999999999987654322
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..+.. ...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~----~~~~~~~-----~~~-- 235 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----RVEKGYK-----MDA-- 235 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHH----HHTTTCC-----CCC--
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHhcCCC-----CCC--
Confidence 22347889999999988889999999999999999998 99999743322 1111 1222211 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
+......+.+++.+||+.+|++||+++|+++.|+++...+
T Consensus 236 --~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 236 --PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 1222346889999999999999999999999999887644
No 154
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-36 Score=346.75 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=194.7
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcC--CCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~--HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|++.+.||+|+||.||++...+++.||||++... .....+.+.+|+.+|++++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 6678899999999999999888999999998643 2344578999999999996 5999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+.+++|.+++.. ...+++.++..++.||++||.|||+ .+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 137 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 668899999984 3578999999999999999999998 8999999999999995 58899999999987654322
Q ss_pred c-eeecccCCccccCCCCCCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC
Q 002336 771 H-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 838 (935)
Q Consensus 771 ~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~ 838 (935)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........+...
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~~ 284 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPN 284 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHCTT
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhCcc
Confidence 2 2234569999999998754 4689999999999999999999999973211 111122222111
Q ss_pred CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 839 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 839 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.....+......+.+++.+||+.||++||+++|+++.
T Consensus 285 ---------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 285 ---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111112368899999999999999999999864
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=339.12 Aligned_cols=242 Identities=23% Similarity=0.308 Sum_probs=199.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--------hhhHHHHHHHHHHHhcCCCcccccceeeeccc
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 682 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~ 682 (935)
...|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 355677899999999999999865 688999999875421 13346788999999999999999999999999
Q ss_pred eEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccc
Q 002336 683 QRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 761 (935)
Q Consensus 683 ~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGl 761 (935)
..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 999999999777 99999973 4569999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccccceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 762 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 762 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
++....... .....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... .
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~----- 237 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------V----- 237 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------T-----
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------H-----
Confidence 987654332 223458999999999887766 88999999999999999999999731110 0
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..... .+......+.+++.+||+.+|++|||++|+++.
T Consensus 238 ----~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 ----EAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----hhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 011122368899999999999999999999875
No 156
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-36 Score=352.45 Aligned_cols=244 Identities=25% Similarity=0.376 Sum_probs=201.6
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 566789999999999999986 799999999865322 2245788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 98 ~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 98 VSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp CSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 999999999973 4679999999999999999999998 8999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 771 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... .+. ..+..+... .
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~----~~i~~~~~~------~- 235 (476)
T 2y94_A 172 --LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLF----KKICDGIFY------T- 235 (476)
T ss_dssp --BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHH----HHHHTTCCC------C-
T ss_pred --ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHH----HHHhcCCcC------C-
Confidence 234569999999999887665 78999999999999999999999743321 111 122222110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.||++|||++|+++
T Consensus 236 ---p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 ---PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1111236789999999999999999999986
No 157
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.1e-36 Score=326.17 Aligned_cols=248 Identities=24% Similarity=0.343 Sum_probs=200.6
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 566789999999999999876 68999999986532 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc---EEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~---vkL~DFGla~~~~~~ 768 (935)
++++|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++......
T Consensus 88 ~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 88 TGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999988873 4568999999999999999999998 89999999999999986655 999999999766543
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.. .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .... .+..+... ...+ .
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~----~~~~~~~~-~~~~-~ 230 (284)
T 3kk8_A 162 EA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYA----QIKAGAYD-YPSP-E 230 (284)
T ss_dssp CB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCC-CCTT-T
T ss_pred cc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHH----HHHhcccc-CCch-h
Confidence 22 22346899999999999999999999999999999999999999743221 1111 11111111 0000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ......+.+++.+||+.+|++|||++|+++
T Consensus 231 ~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 W----DTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp T----TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred h----cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 112236889999999999999999999976
No 158
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.3e-36 Score=337.16 Aligned_cols=247 Identities=29% Similarity=0.429 Sum_probs=198.9
Q ss_pred HHHHhhcccccccccEEEEEEEE-CCCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
...++..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34466788999999999999987 478999999986432 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+. |+|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 688887753 24578999999999999999999998 8999999999999999999999999999986543
Q ss_pred cccceeecccCCccccCCCCC---CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 768 DLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l---~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
. ....||+.|+|||++ ....++.++||||||+++|||++|+.||..... ........... .....
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~-~~~~~ 274 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNE-SPALQ 274 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCCC
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcC-CCCCC
Confidence 2 234689999999987 356789999999999999999999999963321 11122222221 11111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
... ....+.+++.+||+.+|++|||++++++.
T Consensus 275 ----~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 ----SGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ----CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ----CCC----CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 22367899999999999999999998753
No 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.2e-36 Score=329.93 Aligned_cols=246 Identities=24% Similarity=0.352 Sum_probs=201.7
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
|.+.+.||+|+||.||++.+. +++.+|+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 456789999999999999986 57899999986532 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 97 CRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999998873 4578999999999999999999998 8999999999999999999999999999987543222
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ ... .+..+.. .+
T Consensus 171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~-~~~~~~~------~~-- 234 (294)
T 2rku_A 171 R-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYL-RIKKNEY------SI-- 234 (294)
T ss_dssp C-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHH-HHHTTCC------CC--
T ss_pred c-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH-HHhhccC------CC--
Confidence 1 233468999999999988889999999999999999999999997433211 111 1111111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+......+.+++.+||+.+|++||+++|+++.
T Consensus 235 --~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 --PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11122367899999999999999999998763
No 160
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.1e-37 Score=356.49 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=192.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---chhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+++.+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence 4667889999999999999875 6899999998653 22334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ .++|+||||||+|||++.++.+||+|||+++......
T Consensus 229 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 229 YANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp CCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 9999999999874 4578999999999999999999995 2789999999999999999999999999998643322
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .+..+.. .+
T Consensus 304 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~----~i~~~~~------~~- 368 (446)
T 4ejn_A 304 AT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFE----LILMEEI------RF- 368 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC-
T ss_pred cc-cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHH----HHHhCCC------CC-
Confidence 22 23456999999999999899999999999999999999999999743321 1111 1111111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 884 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~ 884 (935)
+......+.+++.+||+.||++|| +++|+++.
T Consensus 369 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 ---PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 111223688999999999999999 99999863
No 161
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.1e-36 Score=334.89 Aligned_cols=257 Identities=22% Similarity=0.272 Sum_probs=200.7
Q ss_pred hHHHHHHhhc-ccccccccEEEEEEEEC-CCcEEEEEEccCcch--hhhHHHHHHHHHHHhc-CCCcccccceeeeccce
Q 002336 609 ELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 609 ~l~~~~~~~~-~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~ 683 (935)
+.-...|.+. +.||+|+||.||+|... +++.||+|++..... .....+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3334455554 88999999999999876 689999999875432 2346789999999999 57999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeecc
Q 002336 684 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFG 760 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFG 760 (935)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++. ++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred EEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 99999999999999998643 34679999999999999999999998 89999999999999987 7899999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
+++....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||....... ... .+.....
T Consensus 180 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~----~i~~~~~ 250 (327)
T 3lm5_A 180 MSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE---TYL----NISQVNV 250 (327)
T ss_dssp GCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCC
T ss_pred cccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHH----HHHhccc
Confidence 9987644322 223468999999999999999999999999999999999999997433211 111 1111110
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.............+.+++.+||+.+|++|||++|+++.
T Consensus 251 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 ------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00011111223468899999999999999999998753
No 162
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4e-36 Score=332.50 Aligned_cols=257 Identities=24% Similarity=0.341 Sum_probs=195.5
Q ss_pred Hhh-cccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEEec
Q 002336 615 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~-~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++ .+.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence 344 367999999999999865 7899999999766555567899999999985 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc---EEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~---vkL~DFGla~~~~~~ 768 (935)
++++|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++. +||+|||++......
T Consensus 94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999974 3568999999999999999999998 89999999999999998776 999999998765322
Q ss_pred cc------ceeecccCCccccCCCCCCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc-h-------hHHH
Q 002336 769 LT------HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-L-------NIVH 829 (935)
Q Consensus 769 ~~------~~~~~~~gt~~y~APE~l~~-----~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~-~-------~l~~ 829 (935)
.. .......||+.|+|||.+.. ..++.++||||||+++|||++|+.||......+. . ....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123458999999998864 4578999999999999999999999975432210 0 0011
Q ss_pred HHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 830 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 830 ~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
-....+..+... ...+ ... .....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111222222110 0000 000 11236889999999999999999999986
No 163
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-35 Score=325.07 Aligned_cols=245 Identities=29% Similarity=0.428 Sum_probs=195.4
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeec----cceEEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 687 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~----~~~~~lV 687 (935)
+.+.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 345678999999999999875 6889999998653 23445779999999999999999999998764 4568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc--eEecCCCCCCcccc-CCCcEEEeecccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQ 764 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~--ivH~DLkp~NILld-~~~~vkL~DFGla~~ 764 (935)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+ |+||||||+|||++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999974 3568999999999999999999998 67 99999999999997 789999999999975
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
..... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||...... .... ..+..+......
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~-~~~~~~~~~~~~ 251 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIY-RRVTSGVKPASF 251 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHH-HHHTTTCCCGGG
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHHH-HHHhccCCcccc
Confidence 44332 223468999999998864 5899999999999999999999999732221 1111 122222111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+. . ....+.+++.+||+.+|++|||++|+++
T Consensus 252 ~~----~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DK----V----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GG----C----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC----C----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 1 1236889999999999999999999975
No 164
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=328.14 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=196.7
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCCCCH
Q 002336 618 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
...||+|+||.||+|.+. +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 358999999999999875 6889999998776555667899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC-CCcEEEeeccccccccccccceeec
Q 002336 697 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSV 775 (935)
Q Consensus 697 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~-~~~vkL~DFGla~~~~~~~~~~~~~ 775 (935)
.+++........+++..+..++.|+++||+|||+ ++|+||||||+||+++. ++.+||+|||++........ ....
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 182 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTET 182 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccc
Confidence 9999865445567899999999999999999998 89999999999999987 89999999999987543222 1233
Q ss_pred ccCCccccCCCCCCCC--CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCC
Q 002336 776 ARGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 853 (935)
Q Consensus 776 ~~gt~~y~APE~l~~~--~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~ 853 (935)
..|++.|+|||.+.+. .++.++||||||+++|+|++|+.||........ ... ..... . ..+.+ +
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~---~~~~~-~-----~~~~~----~ 248 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMF---KVGMF-K-----VHPEI----P 248 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HHH---HHHHH-C-----CCCCC----C
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HHH---hhccc-c-----ccccc----c
Confidence 4689999999998654 378999999999999999999999963222111 111 11110 0 11111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 854 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 854 ~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
......+.+++.+||+.+|++||+++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222346889999999999999999999875
No 165
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-36 Score=366.41 Aligned_cols=249 Identities=27% Similarity=0.462 Sum_probs=199.4
Q ss_pred ccccccccEEEEEEEEC---CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecCC
Q 002336 619 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999663 467899999976432 235789999999999999999999999965 458899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc--c
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT--H 771 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~--~ 771 (935)
|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 4678999999999999999999998 8999999999999999999999999999987644322 1
Q ss_pred eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 772 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . +...+..+....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~----~~~~i~~~~~~~-------- 592 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---E----VTAMLEKGERMG-------- 592 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H----HHHHHHTTCCCC--------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---H----HHHHHHcCCCCC--------
Confidence 1223346788999999988899999999999999999998 99999743321 1 222233322111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhh
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 890 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~ 890 (935)
.+......+.+++.+||+.||++||++++|++.|+++..
T Consensus 593 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112233478899999999999999999999999998654
No 166
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-36 Score=342.04 Aligned_cols=254 Identities=26% Similarity=0.354 Sum_probs=202.5
Q ss_pred HHHhhcccccccccEEEEEEEE----CCCcEEEEEEccCcc----hhhhHHHHHHHHHHHhc-CCCcccccceeeeccce
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~ 683 (935)
..|++.+.||+|+||.||+++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 3467789999999999999987 368999999986532 12345678899999999 69999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 684 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
.++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999974 3568999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccceeecccCCccccCCCCCCC--CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 764 QAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 764 ~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+......
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~--- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE--- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC---
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC---
Confidence 765443333344569999999999875 4578999999999999999999999974433221 222222222111
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 002336 842 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLAI 885 (935)
Q Consensus 842 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~L 885 (935)
+. .+......+.+++.+||+.||++|| +++|+++..
T Consensus 283 ----~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1222234678999999999999999 999987653
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=338.39 Aligned_cols=253 Identities=16% Similarity=0.166 Sum_probs=203.6
Q ss_pred HHHhhcccccccccEEEEEEE------ECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC---CCcccccceeeeccce
Q 002336 613 ATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~---HpnIv~l~g~~~~~~~ 683 (935)
..|.+.+.||+|+||.||+|. ...++.||||++.... ..++..|+++++.++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 345667899999999999994 3468899999987543 346778888888886 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC-----------
Q 002336 684 RILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI----------- 750 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~----------- 750 (935)
.++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccc
Confidence 999999999999999986421 35679999999999999999999998 89999999999999998
Q ss_pred CCcEEEeecccccccccc-ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHH
Q 002336 751 NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 829 (935)
Q Consensus 751 ~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~ 829 (935)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------ 292 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------ 292 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------
Confidence 899999999999764321 1223344569999999999999899999999999999999999999986322110
Q ss_pred HHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHhhhhhhc
Q 002336 830 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 830 ~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R-Ps~~ev~~~L~~~~~~~ 892 (935)
..+...+.... ....+.+++.+|+..+|.+| |+++++.+.|++.....
T Consensus 293 ------------~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ------------CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ------------EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 01111121111 13367789999999999998 68899999998877653
No 168
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-36 Score=345.64 Aligned_cols=249 Identities=26% Similarity=0.351 Sum_probs=192.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHH-HHhcCCCcccccceeeeccceEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~i-L~~L~HpnIv~l~g~~~~~~~~~lV 687 (935)
..+++.+.||+|+||.||+|+++ +++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 34677899999999999999986 588999999865432 233456677776 5678999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999874 4568899999999999999999998 8999999999999999999999999999986432
Q ss_pred cccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 768 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
... ......||+.|+|||++.+..++.++|+|||||++|||++|+.||...+.. .. ... +..+.. .
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~---~~~-i~~~~~------~ 257 (373)
T 2r5t_A 192 HNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EM---YDN-ILNKPL------Q 257 (373)
T ss_dssp CCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---HH---HHH-HHHSCC------C
T ss_pred CCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HH---HHH-HHhccc------C
Confidence 221 233456999999999999999999999999999999999999999743221 11 111 111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAI 885 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L 885 (935)
+ +......+.+++.+||+.||++||++.+.++.+
T Consensus 258 ~----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 258 L----KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp C----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred C----CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1 111223678999999999999999986444333
No 169
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=338.03 Aligned_cols=259 Identities=21% Similarity=0.305 Sum_probs=192.9
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh-hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 456789999999999999986 7899999998654322 22356689999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 84 -~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 156 (324)
T 3mtl_A 84 -KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 156 (324)
T ss_dssp -EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred -cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-
Confidence 5898888753 4568999999999999999999998 89999999999999999999999999999765433222
Q ss_pred eecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC---Ceeecccc--
Q 002336 773 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISIVDP-- 846 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~---~~~~~~d~-- 846 (935)
.....||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+ ....+.+..... ........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchh
Confidence 223458999999998865 678999999999999999999999997543322 222222221110 00000000
Q ss_pred -------cccC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 847 -------VLIG----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 847 -------~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.... .........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 000112246789999999999999999999976
No 170
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.5e-36 Score=327.02 Aligned_cols=244 Identities=23% Similarity=0.353 Sum_probs=200.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 4667889999999999999886 578899999864321 123578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. ...+++..+..++.|+++||.|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 95 FAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999874 3468999999999999999999997 899999999999999999999999999987654322
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .. ..+..... .+
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~-~~~~~~~~------~~- 231 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------TH-RRIVNVDL------KF- 231 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HH-HHHHTTCC------CC-
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HH-HHHhcccc------CC-
Confidence 223468999999999999899999999999999999999999997432211 11 11111111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.+|++||+++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 ---PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1122346889999999999999999999986
No 171
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.2e-36 Score=327.40 Aligned_cols=245 Identities=20% Similarity=0.299 Sum_probs=197.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 687 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV 687 (935)
...|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 356777899999999999999986 79999999987532 33456788999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC---------------
Q 002336 688 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--------------- 751 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~--------------- 751 (935)
|||+++++|.+++.... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999987432 12568999999999999999999998 899999999999999844
Q ss_pred ----CcEEEeeccccccccccccceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchh
Q 002336 752 ----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN 826 (935)
Q Consensus 752 ----~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~ 826 (935)
..+||+|||++....... ...|++.|+|||.+.+. .++.++||||||+++++|++|..++.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----Q 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----H
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----H
Confidence 479999999998765432 23489999999998765 66789999999999999999998764211 1
Q ss_pred HHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 827 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 827 l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ..+..+.... +.... ...+.+++.+||+.||++|||++|+++
T Consensus 237 ~-----~~~~~~~~~~-----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 W-----HEIRQGRLPR-----IPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp H-----HHHHTTCCCC-----CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-----HHHHcCCCCC-----CCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 1122222211 11122 236889999999999999999999875
No 172
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.7e-36 Score=342.24 Aligned_cols=264 Identities=21% Similarity=0.293 Sum_probs=201.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
...|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 345667789999999999999886 68999999987653 3345779999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999974 3568999999999999999999997 5 8999999999999999999999999998765332
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHH-----------------
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA----------------- 831 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~----------------- 831 (935)
. .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+...........
T Consensus 186 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 M---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp C-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 1 22346899999999999999999999999999999999999999743321110000000
Q ss_pred ------HHhhhcCCeeecccc----cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 832 ------RSMIKKGDVISIVDP----VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 832 ------~~~i~~~~~~~~~d~----~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..........+.++. .............+.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000000000 00000011123368899999999999999999999864
No 173
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-36 Score=338.74 Aligned_cols=266 Identities=27% Similarity=0.454 Sum_probs=207.1
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeecc
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 681 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~ 681 (935)
++....|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++...
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 444556778899999999999999842 57789999997543 34456799999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCC----CCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcE
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVN----QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRA 754 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~v 754 (935)
...++||||+++++|.+++..... ...+++..++.++.|+++||.|||+ .+|+||||||+|||++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999975431 2458999999999999999999998 89999999999999984 4569
Q ss_pred EEeecccccccccccc-ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHH
Q 002336 755 KVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 832 (935)
Q Consensus 755 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 832 (935)
||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... ...+
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~--- 256 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLE--- 256 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH---
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHH---
Confidence 9999999875433221 12223457889999999988889999999999999999998 99999743221 1211
Q ss_pred HhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 833 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 833 ~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
.+..+.... . +......+.+++.+||+.+|++||++.|+++.|+.+.....
T Consensus 257 -~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 257 -FVTSGGRMD-----P----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp -HHHTTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred -HHhcCCCCC-----C----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 222221111 1 11223368899999999999999999999999998776443
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-36 Score=344.29 Aligned_cols=262 Identities=25% Similarity=0.343 Sum_probs=189.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcC-CCcccccceeeecc--ceEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEE--HQRI 685 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~--~~~~ 685 (935)
...|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++.+. ||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 345677899999999999999875 6899999998643 2345567889999999997 99999999998654 3789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||++ ++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 88 lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 9999997 689998873 468999999999999999999998 89999999999999999999999999999865
Q ss_pred cccc--------------------cceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc
Q 002336 766 EEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 824 (935)
Q Consensus 766 ~~~~--------------------~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~ 824 (935)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 3210 111233469999999998876 6789999999999999999999999975433211
Q ss_pred hhHHHHHHHhhhcCCeeec-----------c----------cccccCCC------------CHHHHHHHHHHHHHccccC
Q 002336 825 LNIVHWARSMIKKGDVISI-----------V----------DPVLIGNV------------KIESIWRIAEVAIQCVEQR 871 (935)
Q Consensus 825 ~~l~~~~~~~i~~~~~~~~-----------~----------d~~l~~~~------------~~~~~~~l~~li~~Cl~~d 871 (935)
. .-+...+.......+ + .......+ .......+.+++.+||+.|
T Consensus 240 ~---~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 240 L---ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp H---HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred H---HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 1 111111100000000 0 00000000 0011236889999999999
Q ss_pred CCCCCCHHHHHHH
Q 002336 872 GFSRPKMQEIVLA 884 (935)
Q Consensus 872 P~~RPs~~ev~~~ 884 (935)
|++|||++|+++.
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999765
No 175
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.6e-35 Score=339.67 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=188.1
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHh-cCCCcccccceeeec----cceEEEEEEecC
Q 002336 619 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSR-IHHRNLVPLIGYCEE----EHQRILVYEYMH 692 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~-L~HpnIv~l~g~~~~----~~~~~lV~E~~~ 692 (935)
+.||+|+||.||++.+. +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999876 6899999998632 456788888754 489999999998865 667899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeeccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFGla~~~~~~~ 769 (935)
+|+|.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999853 23469999999999999999999998 89999999999999997 7889999999998654322
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc-hhHHHHHHHhhhcCCeeecccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~-~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .+..+... ...+ .
T Consensus 219 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~-~~~~-~ 290 (400)
T 1nxk_A 219 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYE-FPNP-E 290 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCC-CCTT-T
T ss_pred c--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCccc-CCCc-c
Confidence 1 2345689999999999999999999999999999999999999974432211 11111 12222111 0000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
. ......+.+++.+||+.||++|||++|+++.
T Consensus 291 ~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 W----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp T----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1123468899999999999999999999874
No 176
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.9e-36 Score=336.18 Aligned_cols=246 Identities=24% Similarity=0.355 Sum_probs=201.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|.+.+.||+|+||.||++.+. +++.+|+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 3556789999999999999886 57899999986532 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. ...+++.+++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 122 ~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 122 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999998873 4578999999999999999999998 899999999999999999999999999998754322
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .+..+.. .+.
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~-~~~~~~~------~~~ 261 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYL-RIKKNEY------SIP 261 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHH-HHHHTCC------CCC
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHH-HHhcCCC------CCC
Confidence 2 1233468999999999988889999999999999999999999997433211 111 1111111 111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
... ...+.+++.+||+.||++||+++|+++
T Consensus 262 ~~~----~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 KHI----NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112 236789999999999999999999976
No 177
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.2e-36 Score=354.87 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=203.5
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
+++.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|+++|+.++||||+++++++.+.+..++||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 456789999999999999886 69999999986532 12345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 266 ~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 266 MNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 9999999998753 24459999999999999999999998 8999999999999999999999999999987654322
Q ss_pred ceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccC
Q 002336 771 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 850 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~ 850 (935)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+.+.+.....
T Consensus 342 --~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~---~i~~~i~~~~~---------- 406 (576)
T 2acx_A 342 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE---EVERLVKEVPE---------- 406 (576)
T ss_dssp --EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH---HHHHHHHHCCC----------
T ss_pred --ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH---HHHHHhhcccc----------
Confidence 233469999999999999899999999999999999999999997543321111 11112221111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002336 851 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 884 (935)
Q Consensus 851 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~ev~~~ 884 (935)
.++......+.+++.+||+.||++|| +++||++.
T Consensus 407 ~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11112223688999999999999999 78888754
No 178
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-35 Score=347.55 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=192.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeecc------ceE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~------~~~ 684 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+|+.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 3566889999999999999876 6899999999754 234457789999999999999999999998554 457
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++ +|.+.+. ..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999976 4666664 238899999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHH-H--------------
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV-H-------------- 829 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~-~-------------- 829 (935)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+....+ +
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 64432 223456899999999999999999999999999999999999999854432111100 0
Q ss_pred -HHHHhhhcCC------eeecccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 830 -WARSMIKKGD------VISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 830 -~~~~~i~~~~------~~~~~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+..+.... ....+...+.... .......+.+++.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000010000 0000000000000 01124568999999999999999999999874
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.8e-36 Score=344.81 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=192.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--------hhhhHHHHHHHHHHHhcCCCcccccceeee
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 679 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--------~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~ 679 (935)
......|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+++|++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 334556778899999999999999876 68999999986432 112246889999999999999999999986
Q ss_pred ccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC---CcEEE
Q 002336 680 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKV 756 (935)
Q Consensus 680 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~---~~vkL 756 (935)
. +..++||||+++|+|.+++. ....+++..+..++.|+++||+|||+ ++|+||||||+|||++.+ +.+||
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-CceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 5 45799999999999999887 34679999999999999999999998 899999999999999754 45999
Q ss_pred eeccccccccccccceeecccCCccccCCCCCCC---CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHH
Q 002336 757 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 757 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~---~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
+|||+++...... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||....... .+.+
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~---- 355 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD---- 355 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHH----
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHH----
Confidence 9999998765432 2234568999999999853 677899999999999999999999997432221 1211
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.+..+..... +.... .....+.+++.+||+.||++||+++|+++.
T Consensus 356 ~i~~~~~~~~--~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNFI--PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCCC--HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCCC--chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1222211110 00001 122468899999999999999999999863
No 180
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.7e-36 Score=328.32 Aligned_cols=246 Identities=29% Similarity=0.447 Sum_probs=202.7
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
+++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 556789999999999999875 68999999986543 3345789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+++|.+++. ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 104 ~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 175 (303)
T 3a7i_A 104 GGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK- 175 (303)
T ss_dssp TEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC-
T ss_pred CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc-
Confidence 999999986 3568999999999999999999998 89999999999999999999999999999776543221
Q ss_pred eecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCC
Q 002336 773 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 852 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~ 852 (935)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .... .+..+.. +.+...+
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~~~~~~~-----~~~~~~~ 243 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLF----LIPKNNP-----PTLEGNY 243 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHSCC-----CCCCSSC
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHH----HhhcCCC-----CCCcccc
Confidence 23346899999999999989999999999999999999999999733211 1111 1111111 1122222
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 853 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 853 ~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+ ..+.+++.+||+.+|++|||++|+++.
T Consensus 244 ~----~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 S----KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp C----HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred C----HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2 368899999999999999999999764
No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-36 Score=337.33 Aligned_cols=262 Identities=23% Similarity=0.341 Sum_probs=197.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 3667889999999999999886 589999999865432 2346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 770 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~ 770 (935)
+++++|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999998876 34569999999999999999999998 8999999999999999999999999999976543322
Q ss_pred ceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHH----------HhhhcCC
Q 002336 771 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR----------SMIKKGD 839 (935)
Q Consensus 771 ~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~----------~~i~~~~ 839 (935)
......|++.|+|||.+.+. .++.++||||+|+++|+|++|+.||......+. +..... .......
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcc
Confidence 12334589999999988765 789999999999999999999999974433211 111110 0000000
Q ss_pred -eeecccccccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 840 -VISIVDPVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 840 -~~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
......+.+....+ ......+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000111111111 1223478899999999999999999998763
No 182
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.1e-35 Score=345.80 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=206.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCC-CcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~H-pnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|.+. +++.||||++.... ...++.+|+++++.++| +++..+..++...+..++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 3566889999999999999874 68999999876432 23568899999999987 55555556667788889999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeecccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~~~~~~ 768 (935)
+++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999999743 4569999999999999999999998 899999999999999 68899999999999876543
Q ss_pred ccc------eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 769 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 769 ~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 321 12245699999999999999999999999999999999999999985544333333322222211111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
+...+ ...+.+++.+||+.+|++||++++|++.|+++...+
T Consensus 240 -----l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 -----LCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----HHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 11112 236889999999999999999999999999886543
No 183
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-36 Score=337.40 Aligned_cols=259 Identities=19% Similarity=0.263 Sum_probs=189.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh--hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 4667899999999999999865 7899999998754322 245678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc-----cCCCcEEEeeccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL-----DINMRAKVSDFGLSRQA 765 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl-----d~~~~vkL~DFGla~~~ 765 (935)
++ |+|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 115 ~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 115 AE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 97 599999874 4568999999999999999999998 899999999999999 45556999999999865
Q ss_pred cccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCC---ee
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VI 841 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~---~~ 841 (935)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.... ....... ..
T Consensus 188 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~-~~~~~~~~~~~~ 263 (329)
T 3gbz_A 188 GIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID--QLFKIF-EVLGLPDDTTWP 263 (329)
T ss_dssp C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH-HHHCCCCTTTST
T ss_pred CCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH--HHHHHH-HHhCCCchhhhh
Confidence 433222 223457999999999876 458999999999999999999999997433211 111111 1111000 00
Q ss_pred ecc--------cccccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 842 SIV--------DPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 842 ~~~--------d~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
... .+..... .+......+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000000 00012246789999999999999999999975
No 184
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-36 Score=327.47 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=200.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeee--ccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~--~~~~~~lV~ 688 (935)
.|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 3556789999999999999886 68999999986532 344567999999999999999999999874 466889999
Q ss_pred EecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCc-----eEecCCCCCCccccCCCcEEEeecccc
Q 002336 689 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLS 762 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~-----ivH~DLkp~NILld~~~~vkL~DFGla 762 (935)
||+++++|.+++.... ....+++..++.++.|+++||+|||+ .+ |+||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999987432 34458999999999999999999998 66 999999999999999999999999998
Q ss_pred ccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
+........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ... ...+..+....
T Consensus 164 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~----~~~i~~~~~~~ 235 (279)
T 2w5a_A 164 RILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KEL----AGKIREGKFRR 235 (279)
T ss_dssp HHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH----HHHHHHTCCCC
T ss_pred eeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHH----HHHHhhccccc
Confidence 765433211 1234589999999999888899999999999999999999999974322 111 12232332211
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHh
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 886 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~ 886 (935)
+.. .....+.+++.+||+.+|++||+++||++.+.
T Consensus 236 -----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -----IPY----RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----CCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111 22346889999999999999999999987543
No 185
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.2e-36 Score=323.60 Aligned_cols=246 Identities=24% Similarity=0.392 Sum_probs=193.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 3566789999999999999986 799999999865322 234578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. ...+++..+..++.|+++||+|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999874 3568999999999999999999998 899999999999999999999999999998764432
Q ss_pred cceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
. .....|++.|+|||.+.+..+ +.++||||||+++++|++|+.||...... ... +.+..+.. .+
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~----~~~~~~~~------~~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLF----KKIRGGVF------YI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHCCC------CC
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HHH----HHhhcCcc------cC
Confidence 1 223458999999999987665 68999999999999999999999743221 111 12222211 01
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+......+.+++.+||+.+|++|||++|+++.
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11122368899999999999999999999873
No 186
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=324.64 Aligned_cols=248 Identities=24% Similarity=0.340 Sum_probs=195.3
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc----hhhhHHHHHHHHHHHhcCCCcccccceee--eccceEEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRILV 687 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~~E~~iL~~L~HpnIv~l~g~~--~~~~~~~lV 687 (935)
|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++ .+....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 566789999999999999875 68899999986532 23456799999999999999999999998 455678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|||++++ |.+.+... ....+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred ehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999876 77776643 35679999999999999999999998 8999999999999999999999999999987543
Q ss_pred cc-cceeecccCCccccCCCCCCCCC--CCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 768 DL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 768 ~~-~~~~~~~~gt~~y~APE~l~~~~--~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
.. ........|++.|+|||.+.+.. .+.++||||||+++|||++|+.||...... +. ...+..+..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~-~~~i~~~~~---- 230 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KL-FENIGKGSY---- 230 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HH-HHHHHHCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HH-HHHHhcCCC----
Confidence 21 22233456899999999987643 478999999999999999999999743221 11 112222211
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.+... ....+.+++.+||+.||++||+++|+++.
T Consensus 231 --~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 --AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11112 22367899999999999999999999864
No 187
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.2e-36 Score=329.14 Aligned_cols=250 Identities=20% Similarity=0.353 Sum_probs=196.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEecC
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 692 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~~ 692 (935)
.|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 4567889999999999999986 589999999876655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccce
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 772 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~ 772 (935)
+++|.+++... ...+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 173 (302)
T 2j7t_A 100 GGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-K 173 (302)
T ss_dssp TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C
T ss_pred CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-c
Confidence 99999988642 4568999999999999999999998 8999999999999999999999999998764322111 1
Q ss_pred eecccCCccccCCCCC-----CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccc
Q 002336 773 SSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 847 (935)
Q Consensus 773 ~~~~~gt~~y~APE~l-----~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~ 847 (935)
.....|++.|+|||.+ ....++.++||||||+++|+|++|+.||...... ........ +.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~~-- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAK-SDPPTLLT-- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHH-SCCCCCSS--
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhc-cCCcccCC--
Confidence 2234589999999987 4677899999999999999999999999743221 11111111 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 848 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 848 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+......+.+++.+||+.+|++|||++|+++
T Consensus 245 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1122346889999999999999999999874
No 188
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=334.05 Aligned_cols=263 Identities=21% Similarity=0.227 Sum_probs=196.6
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh-----hhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
...|++.+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+++++.++||||+++++++.+....+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 345777899999999999999986 5899999998653221 1346889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+++ +|.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 89 lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 99999986 88888864 24568889999999999999999998 89999999999999999999999999999876
Q ss_pred cccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC---Cee
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVI 841 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~---~~~ 841 (935)
..... ......||+.|+|||.+.+ ..++.++||||||+++|||++|..||......+ .+.. +....... ...
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~--~~~~-i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD--QLTR-IFETLGTPTEEQWP 238 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHHHCCCCTTTSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHH-HHHHcCCCChhhhh
Confidence 44322 2233468999999998865 458999999999999999999999997443211 1111 11111100 000
Q ss_pred ec---ccccc---cCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 842 SI---VDPVL---IGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 842 ~~---~d~~l---~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.. .+... ....+ ......+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 00000 00001 1122478999999999999999999999864
No 189
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.8e-36 Score=326.74 Aligned_cols=258 Identities=27% Similarity=0.402 Sum_probs=196.3
Q ss_pred HHHhhcccccccccEEEEEEEEC--CCc--EEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~--~g~--~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
..|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45677899999999999999864 333 68999987542 334578999999999999999999999998765 88
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+++++|.+++... ...+++..+..++.|+++||.|||+ ++++||||||+||+++.++.+||+|||++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 999999999999998742 3568999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccc--eeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 766 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 766 ~~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
...... ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... +........+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~~ 245 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGERLP 245 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCCCC
Confidence 543322 1223457888999999988888999999999999999999 99999743221 11222222211110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhh
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 891 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~ 891 (935)
. +......+.+++.+||+.+|++||+++++++.|++....
T Consensus 246 -----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 246 -----R----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----C----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1 112234688999999999999999999999999987653
No 190
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.8e-36 Score=334.83 Aligned_cols=261 Identities=20% Similarity=0.265 Sum_probs=196.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeec--------cc
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------EH 682 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~--------~~ 682 (935)
.|++.+.||+|+||.||+|.+. +|+.||+|++..... .....+.+|+++++.++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 4667899999999999999984 789999999865432 224578899999999999999999999876 44
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccc
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 762 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla 762 (935)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 68999999975 777777643 3569999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccc---cceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhc-
Q 002336 763 RQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK- 837 (935)
Q Consensus 763 ~~~~~~~---~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~- 837 (935)
+...... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......... ..+......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~ 248 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL---ALISQLCGSI 248 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCC
Confidence 8654221 112234468999999998865 56899999999999999999999999854332211 111111111
Q ss_pred --CCeeecccccc-------cC-CCCH-HH------HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 838 --GDVISIVDPVL-------IG-NVKI-ES------IWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 838 --~~~~~~~d~~l-------~~-~~~~-~~------~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
......-+... .. .... +. ...+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00000000000 00 0000 11 135789999999999999999999875
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.6e-37 Score=347.28 Aligned_cols=239 Identities=16% Similarity=0.157 Sum_probs=184.2
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---chhhhHHHHHHHH---HHHhcCCCcccccc-------eeeec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVA---LLSRIHHRNLVPLI-------GYCEE 680 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~---iL~~L~HpnIv~l~-------g~~~~ 680 (935)
+.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+. ++++++|||||+++ +++..
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 455789999999999999974 6999999998632 3344578899995 45555799999998 55544
Q ss_pred cc-----------------eEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEec
Q 002336 681 EH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHR 739 (935)
Q Consensus 681 ~~-----------------~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~ 739 (935)
.+ ..++||||+ +|+|.+++.... ....+++..++.++.|+++||+|||+ ++|+||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHr 230 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHT 230 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECS
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 43 278999999 689999987421 11234458888999999999999998 899999
Q ss_pred CCCCCCccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCC-----------CCCchhHHHHHHHHHHH
Q 002336 740 DVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLLE 808 (935)
Q Consensus 740 DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-----------~~s~ksDVwS~Gvil~e 808 (935)
||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 9999999999999999999999986433 2234457 999999998876 89999999999999999
Q ss_pred HHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 809 LISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 809 LltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
|++|+.||......... ..+.. . .... ...+.+++.+||+.||++||++.|+++
T Consensus 306 lltg~~Pf~~~~~~~~~---------------~~~~~-~-~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 306 IWCADLPITKDAALGGS---------------EWIFR-S-CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHSSCCC------CCS---------------GGGGS-S-CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHCCCCCcccccccch---------------hhhhh-h-ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999733221110 00111 0 0112 236889999999999999999999986
No 192
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.4e-35 Score=339.44 Aligned_cols=197 Identities=25% Similarity=0.348 Sum_probs=165.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeecc-----ceEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 685 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~-----~~~~ 685 (935)
.|.+.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+++|+.++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 4667889999999999999876 5889999999753 233457899999999999999999999998765 5789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||++ ++|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999986 699999973 4669999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccc---------------------eeecccCCccccCCCCC-CCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002336 766 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 817 (935)
Q Consensus 766 ~~~~~~---------------------~~~~~~gt~~y~APE~l-~~~~~s~ksDVwS~Gvil~eLltG~~Pf~ 817 (935)
...... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 433211 12445689999999975 56679999999999999999998665554
No 193
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-36 Score=337.47 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=192.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccc------eE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~------~~ 684 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+++++.++||||+++++++.... ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 3566789999999999999875 6999999998543 2234567899999999999999999999987653 46
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999873 468999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCC----
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 839 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~---- 839 (935)
.... .....+|+.|+|||++.+ ..++.++||||+||+++||++|+.||.+.+..+.. ..+........
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL---KEIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhcCCCCHHHH
Confidence 5432 223468999999998866 68999999999999999999999999854432111 11111000000
Q ss_pred --------------eeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 840 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 840 --------------~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
........+. .........+.+++.+||+.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000000000 1111223468899999999999999999999873
No 194
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=325.60 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=198.3
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
....+++.+.||+|+||.||+|.+. +|+.||+|++... ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3445667889999999999999886 5899999998653 234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 105 YCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 9999999999863 24568999999999999999999998 899999999999999999999999999997764432
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... . ... +.........
T Consensus 180 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~-~~~~~~~~~~----- 246 (314)
T 3com_A 180 AK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---A---IFM-IPTNPPPTFR----- 246 (314)
T ss_dssp SC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHH-HHHSCCCCCS-----
T ss_pred cc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---H---HHH-HhcCCCcccC-----
Confidence 22 233458999999999998889999999999999999999999997332211 1 111 1111111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.+......+.+++.+||+.+|++||+++++++
T Consensus 247 --~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 247 --KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11112346889999999999999999999975
No 195
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-35 Score=345.63 Aligned_cols=191 Identities=26% Similarity=0.388 Sum_probs=152.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeec-----cceEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQRI 685 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~-----~~~~~ 685 (935)
.|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+++|++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 4677899999999999999876 6899999998653 23345789999999999999999999999843 35789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||+ +++|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 999998 579999987 34679999999999999999999998 89999999999999999999999999999875
Q ss_pred ccccc--------------------------ceeecccCCccccCCCCC-CCCCCCchhHHHHHHHHHHHHHh
Q 002336 766 EEDLT--------------------------HISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELIS 811 (935)
Q Consensus 766 ~~~~~--------------------------~~~~~~~gt~~y~APE~l-~~~~~s~ksDVwS~Gvil~eLlt 811 (935)
..... .......||+.|+|||++ ....++.++|||||||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 43211 112334689999999975 56779999999999999999999
No 196
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.8e-35 Score=337.36 Aligned_cols=266 Identities=22% Similarity=0.270 Sum_probs=202.3
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC--------CCcccccceee
Q 002336 608 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLIGYC 678 (935)
Q Consensus 608 ~~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~--------HpnIv~l~g~~ 678 (935)
.++....|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+++++.++ |+||+++++++
T Consensus 32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 3333456778899999999999999875 6889999998754 344567889999999985 78899999998
Q ss_pred e----ccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCC-
Q 002336 679 E----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINM- 752 (935)
Q Consensus 679 ~----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~- 752 (935)
. .....++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 7 566889999999 56666655433 23569999999999999999999998 7 999999999999999775
Q ss_pred ------------------------------------------------cEEEeeccccccccccccceeecccCCccccC
Q 002336 753 ------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGYLD 784 (935)
Q Consensus 753 ------------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~A 784 (935)
.+||+|||+++...... ....||+.|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~a 261 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGCC
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcccC
Confidence 79999999998764432 23468999999
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchh---HHHHHHHhhhc--------CC-----------eee
Q 002336 785 PEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN---IVHWARSMIKK--------GD-----------VIS 842 (935)
Q Consensus 785 PE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~---l~~~~~~~i~~--------~~-----------~~~ 842 (935)
||++.+..++.++|||||||++|||++|+.||.......... ....+.+.... +. ...
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 999988889999999999999999999999997544332111 11111111110 00 000
Q ss_pred cccccc---------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 IVDPVL---------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 ~~d~~l---------~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+.+... .-..+......+.+++.+||+.||++|||++|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000 00234556678999999999999999999999975
No 197
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.5e-35 Score=326.08 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=197.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeec--cceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~--~~~~~lV~ 688 (935)
..|++.+.||+|+||.||+|... +++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 44677899999999999999874 7899999998743 3467899999999997 9999999999987 66789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC-cEEEeeccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 767 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~-~vkL~DFGla~~~~~ 767 (935)
||+++++|.+++. .+++..+..++.|+++||+|||+ ++|+||||||+|||++.++ .+||+|||+++....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999885 37889999999999999999998 8999999999999999776 899999999986544
Q ss_pred cccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHH--------HhhhcC
Q 002336 768 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 838 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~--------~~i~~~ 838 (935)
... .....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence 322 233468999999999876 67899999999999999999999999532221 111111110 000000
Q ss_pred Ce--------------eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 839 DV--------------ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 839 ~~--------------~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.. ...................+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000000111111123457899999999999999999999986
No 198
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-35 Score=334.26 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=199.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--------hhhHHHHHHHHHHHhc-CCCcccccceeeeccc
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 682 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~ 682 (935)
..|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 34555789999999999999986 799999999865321 1235688999999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccc
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 762 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla 762 (935)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999873 4568999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccceeecccCCccccCCCCCC------CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 836 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~------~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~ 836 (935)
........ .....||+.|+|||++. ...++.++||||||+++|+|++|+.||...... .... .+.
T Consensus 248 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~----~i~ 318 (365)
T 2y7j_A 248 CHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLR----MIM 318 (365)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHH
T ss_pred cccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHH----HHH
Confidence 87654322 23356899999999874 346889999999999999999999999743211 1111 121
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 837 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 837 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.+.... ..+. ... ....+.+++.+||+.||++||+++|+++
T Consensus 319 ~~~~~~-~~~~-~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQF-SSPE-WDD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCCC-CHHH-HSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCC-CCcc-ccc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 221110 0000 011 1236889999999999999999999986
No 199
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.3e-36 Score=324.93 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=184.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-h-hhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-H-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~-~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
..+++.+.||+|+||.||+|... +|+.||+|++..... . ..+.+.++...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 34567889999999999999874 789999999875422 2 22345555556788899999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCCcEEEeeccccccccc
Q 002336 690 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 767 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~ 767 (935)
|++ |+|.+++.... ....+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 997 58877765321 35679999999999999999999998 6 999999999999999999999999999987644
Q ss_pred cccceeecccCCccccCCCCC----CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 768 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 768 ~~~~~~~~~~gt~~y~APE~l----~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
... .....||+.|+|||.+ .+..++.++||||+|+++|+|++|+.||...... . ......+..... ..
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~----~~~~~~~~~~~~-~~ 234 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-F----QQLKQVVEEPSP-QL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-H----HHHHHHHHSCCC-CC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-H----HHHHHHhccCCC-Cc
Confidence 322 2233589999999985 5667899999999999999999999999732221 1 111222222111 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. .......+.+++.+||+.+|++|||++|+++
T Consensus 235 ~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 P--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C--------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 1112236889999999999999999999986
No 200
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.7e-35 Score=348.94 Aligned_cols=251 Identities=27% Similarity=0.408 Sum_probs=198.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
...|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888999999999999999986 68899999987543 223567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeeccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQA 765 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFGla~~~ 765 (935)
||+++|+|.+.+.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++. ++.+||+|||++...
T Consensus 116 e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 116 ECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999998863 4568999999999999999999998 89999999999999976 455999999999876
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
..... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .+. ..+..+.... +
T Consensus 190 ~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~----~~i~~~~~~~--~ 257 (494)
T 3lij_A 190 ENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EIL----RKVEKGKYTF--D 257 (494)
T ss_dssp BTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHTCCCC--C
T ss_pred CCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHHhCCCCC--C
Confidence 54322 23356999999999886 46899999999999999999999999743321 111 1222222110 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
...... ....+.+++.+||+.+|++|||++|+++.
T Consensus 258 ~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPEWKN----VSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGGGTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chhccc----CCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111111 12367899999999999999999999864
No 201
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-35 Score=348.70 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=199.2
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
+.+.+.||+|+||.||+|+++ +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 344578999999999999986 699999999865322 2235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 691 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 691 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
+++|+|.+++.... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999987542 24569999999999999999999998 899999999999999999999999999998765433
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+... .+..+..
T Consensus 344 ~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~-~i~~~~~--------- 410 (543)
T 3c4z_A 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQ-RVLEQAV--------- 410 (543)
T ss_dssp CC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHH-HHHHCCC---------
T ss_pred cc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHH-HHhhccc---------
Confidence 22 233469999999999999999999999999999999999999997543221 1111111 2211111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002336 850 GNVKIESIWRIAEVAIQCVEQRGFSRPKM 878 (935)
Q Consensus 850 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 878 (935)
.++......+.+++.+||+.+|++||++
T Consensus 411 -~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 -TYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 1112223467899999999999999975
No 202
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-35 Score=327.69 Aligned_cols=254 Identities=26% Similarity=0.353 Sum_probs=197.9
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--------hhhHHHHHHHHHHHhcCCCcccccceeee
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 679 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~iL~~L~HpnIv~l~g~~~ 679 (935)
......|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 445567888999999999999999876 588999999864321 12346889999999999999999999987
Q ss_pred ccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc---EEE
Q 002336 680 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKV 756 (935)
Q Consensus 680 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~---vkL 756 (935)
.+. .++||||+++++|.+.+.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++. +||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred CCc-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 655 8999999999999998873 4679999999999999999999998 89999999999999987654 999
Q ss_pred eeccccccccccccceeecccCCccccCCCCC---CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHH
Q 002336 757 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 833 (935)
Q Consensus 757 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l---~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~ 833 (935)
+|||+++....... .....|++.|+|||++ ....++.++||||||+++|+|++|+.||....... .+...
T Consensus 159 ~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~--- 231 (322)
T 2ycf_A 159 TDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ--- 231 (322)
T ss_dssp CCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHH---
T ss_pred ccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHH---
Confidence 99999987643221 1234589999999986 45678999999999999999999999997433221 12221
Q ss_pred hhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 834 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 834 ~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+..+.... .+..... ....+.+++.+||+.||++||+++|+++
T Consensus 232 -~~~~~~~~--~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 232 -ITSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHHTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHhCcccc--Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 12221110 0111111 2246889999999999999999999985
No 203
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.8e-35 Score=347.88 Aligned_cols=251 Identities=27% Similarity=0.372 Sum_probs=201.2
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
...|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 466888999999999999999886 78999999986432 223567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc---CCCcEEEeeccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 765 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld---~~~~vkL~DFGla~~~ 765 (935)
||+++|+|.+.+.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++ .++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999998863 3569999999999999999999998 8999999999999995 5667999999999876
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ... ..+..+......
T Consensus 175 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~----~~i~~~~~~~~~- 243 (486)
T 3mwu_A 175 QQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DIL----KRVETGKYAFDL- 243 (486)
T ss_dssp CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHTCCCSCS-
T ss_pred CCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHHhCCCCCCC-
Confidence 44322 233468999999999876 5899999999999999999999999743221 111 112222211100
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+ . .......+.+++.+||+.+|++|||+.|+++.
T Consensus 244 ~-~----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 P-Q----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G-G----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c-c----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 01122367899999999999999999999874
No 204
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.8e-35 Score=347.76 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=204.2
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEE
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~l 686 (935)
....|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4467888999999999999999986 78999999986432 2345679999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---cCCCcEEEeeccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSR 763 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl---d~~~~vkL~DFGla~ 763 (935)
||||+.+|+|.+.+.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999998873 4679999999999999999999998 899999999999999 567899999999998
Q ss_pred cccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 764 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 764 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ... ..+..+.....
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~----~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DIL----KKVEKGKYTFE 247 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHCCCCCC
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHH----HHHHcCCCCCC
Confidence 7644322 223458999999998866 6899999999999999999999999743321 111 12222221110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
. + . .......+.+++.+||+.+|++|||++|+++.
T Consensus 248 ~-~-~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 L-P-Q----WKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp S-G-G----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C-c-c----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 0 0 01123468899999999999999999999863
No 205
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.4e-36 Score=329.44 Aligned_cols=256 Identities=24% Similarity=0.344 Sum_probs=182.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (303)
T 2vwi_A 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 95 (303)
T ss_dssp CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECC
T ss_pred hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhc
Confidence 4566789999999999999865 68999999986432 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccC-----CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 692 HNGTLRDRLHGS-----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 692 ~~gsL~~~L~~~-----~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
++++|.+++... .....+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 999999988631 124568999999999999999999998 899999999999999999999999999987654
Q ss_pred cccc----ceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 767 EDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 767 ~~~~----~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
.... .......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ... .... +...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~---~~~~-~~~~ 245 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---VLM---LTLQ-NDPP 245 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHH---HHHT-SSCC
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---HHH---HHhc-cCCC
Confidence 3211 11233468999999998865 568999999999999999999999997433221 111 1111 1111
Q ss_pred e----cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 842 S----IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 842 ~----~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
. ..++.....+ ...+.+++.+||+.||++||+++|+++
T Consensus 246 ~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 SLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1 1111111222 236889999999999999999999986
No 206
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.9e-36 Score=341.02 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=178.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhc--CCCcccccc-------eeeecc
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLI-------GYCEEE 681 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L--~HpnIv~l~-------g~~~~~ 681 (935)
+.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 456789999999999999976 789999999976432 3445678886555555 699988755 333322
Q ss_pred -----------------ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHH------HHHHHHHHHHhHHhhhcCCCceEe
Q 002336 682 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 738 (935)
Q Consensus 682 -----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~------~~i~~qia~gL~yLHs~~~~~ivH 738 (935)
...++||||++ |+|.+++... +..+++..+ ..++.|+++||+|||+ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 34799999998 8999999753 223455556 7888999999999998 89999
Q ss_pred cCCCCCCccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCC--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 002336 739 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 816 (935)
Q Consensus 739 ~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~s~ksDVwS~Gvil~eLltG~~Pf 816 (935)
|||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998664322 13456799999999987 68999999999999999999999999
Q ss_pred CccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 817 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 817 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
........... ..............-.........+.+++.+||+.||++|||++|+++
T Consensus 294 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 85432211000 000000000000100001122347889999999999999999999964
No 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.6e-35 Score=328.51 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=201.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhh-----------------hHHHHHHHHHHHhcCCCcccccce
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHR-----------------TQQFVTEVALLSRIHHRNLVPLIG 676 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~-----------------~~~~~~E~~iL~~L~HpnIv~l~g 676 (935)
.|.+.+.||+|+||.||+|.. +|+.||+|++....... .+.+.+|+.++++++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 456788999999999999999 79999999986432211 178999999999999999999999
Q ss_pred eeeccceEEEEEEecCCCCHHHH------hccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC
Q 002336 677 YCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 750 (935)
Q Consensus 677 ~~~~~~~~~lV~E~~~~gsL~~~------L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~ 750 (935)
++.+.+..++||||+++++|.++ +... ....+++..++.++.|++.||+|||+ .++|+||||||+||+++.
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence 99999999999999999999998 5432 25679999999999999999999996 379999999999999999
Q ss_pred CCcEEEeeccccccccccccceeecccCCccccCCCCCCCC-CCCc-hhHHHHHHHHHHHHHhCCCCCCccCcccchhHH
Q 002336 751 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 828 (935)
Q Consensus 751 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~-ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~ 828 (935)
++.+||+|||++...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHHH
T ss_pred CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHH
Confidence 999999999999875443 23345689999999999876 6666 999999999999999999999743321 1122
Q ss_pred HHHHHhhhcCCeeeccc------cccc---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 829 HWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 829 ~~~~~~i~~~~~~~~~d------~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+ .+..+......+ +... ..........+.+++.+||+.+|++||+++|+++
T Consensus 263 ~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 N----NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp H----HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H----HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 122221110000 0000 0000122347889999999999999999999986
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.6e-35 Score=321.11 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=196.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch--hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 456789999999999999886 689999999865432 22367889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccccc
Q 002336 692 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 771 (935)
Q Consensus 692 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~ 771 (935)
+ ++|.+++... ....+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 85 ~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 85 H-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp S-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred c-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 7 6999998754 23568999999999999999999998 89999999999999999999999999998765432221
Q ss_pred eeecccCCccccCCCCCCCCC-CCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc------
Q 002336 772 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV------ 844 (935)
Q Consensus 772 ~~~~~~gt~~y~APE~l~~~~-~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~------ 844 (935)
.....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||......+ .+....+ .. +......
T Consensus 160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~-~~--~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFR-TL--GTPDEVVWPGVTS 233 (299)
T ss_dssp -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHH-HH--CCCCTTTSTTGGG
T ss_pred -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHH-Hh--CCCchhhhhHhhc
Confidence 22345799999999987654 7999999999999999999999997433211 1111111 11 1100000
Q ss_pred ----cccccC----C---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 ----DPVLIG----N---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 ----d~~l~~----~---~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.+.+.. . ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0 00112346889999999999999999999976
No 209
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=328.08 Aligned_cols=257 Identities=25% Similarity=0.382 Sum_probs=197.1
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
..+++.+.||+|+||.||+|.++. .+|+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~ 110 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence 345678999999999999999863 49999986532 22345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc-
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 769 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~- 769 (935)
+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++ ++.+||+|||+++......
T Consensus 111 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 111 CKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999742 4568999999999999999999998 8999999999999998 6799999999987643211
Q ss_pred ---cceeecccCCccccCCCCCCC---------CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhc
Q 002336 770 ---THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 837 (935)
Q Consensus 770 ---~~~~~~~~gt~~y~APE~l~~---------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~ 837 (935)
........|++.|+|||.+.. ..++.++||||||+++|||++|+.||...... .. ...+..
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~----~~~~~~ 257 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AI----IWQMGT 257 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HH----HHHHHT
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HH----HHHhcc
Confidence 111223458899999998754 45789999999999999999999999743221 11 111222
Q ss_pred CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 838 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 838 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
+........ .. ...+.+++.+||+.+|++|||++++++.|+++....
T Consensus 258 ~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 258 GMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 221111111 11 125789999999999999999999999999887654
No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.5e-35 Score=334.71 Aligned_cols=260 Identities=22% Similarity=0.275 Sum_probs=190.3
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchh-----------hhHHHHHHHHHHHhcCCCcccccceeee---
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVPLIGYCE--- 679 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~-----------~~~~~~~E~~iL~~L~HpnIv~l~g~~~--- 679 (935)
.|.+.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++.
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 102 (362)
T 3pg1_A 23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102 (362)
T ss_dssp SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence 35557899999999999999988999999998543221 2367899999999999999999999984
Q ss_pred --ccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEe
Q 002336 680 --EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 757 (935)
Q Consensus 680 --~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~ 757 (935)
.....++||||++ |+|.+.+.. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 103 ~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 103 EPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEE
Confidence 3446899999997 688888764 34579999999999999999999998 899999999999999999999999
Q ss_pred eccccccccccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh
Q 002336 758 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 836 (935)
Q Consensus 758 DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~ 836 (935)
|||+++....... .....|++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...+.....
T Consensus 177 Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~ 251 (362)
T 3pg1_A 177 DFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVVG 251 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHC
T ss_pred ecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcC
Confidence 9999975433222 233458999999998876 6789999999999999999999999985432211 111111111
Q ss_pred cCCee-----------eccccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 837 KGDVI-----------SIVDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 837 ~~~~~-----------~~~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..... ..+...+. ..........+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 10000 00000000 00011123468899999999999999999999863
No 211
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.7e-35 Score=338.69 Aligned_cols=259 Identities=23% Similarity=0.273 Sum_probs=192.4
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccc------eEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QRILV 687 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~------~~~lV 687 (935)
.|.+.+.||+|+||.||+|++..+..+|+|++.... ....+|+++++.++||||+++++++.... ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 366789999999999999999877789999886432 22347999999999999999999985433 37899
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc-CCCcEEEeecccccccc
Q 002336 688 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 766 (935)
Q Consensus 688 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld-~~~~vkL~DFGla~~~~ 766 (935)
|||++++.+............+++..+..++.|+++||+|||+ ++|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999876544433222235679999999999999999999998 8999999999999999 79999999999998764
Q ss_pred ccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhc--------
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK-------- 837 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~-------- 837 (935)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+ .+...++ .+..
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~-~~g~p~~~~~~~ 268 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIK-VLGTPSREQIKT 268 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHH
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCCCHHHHHh
Confidence 4322 223468999999998865 468999999999999999999999998543221 1111111 1000
Q ss_pred -------CCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 838 -------GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 838 -------~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..........+....+......+.+++.+||+.||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000111223478899999999999999999999864
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.1e-34 Score=328.20 Aligned_cols=260 Identities=21% Similarity=0.290 Sum_probs=198.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeecc-----ceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~-----~~~~l 686 (935)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3567889999999999999876 68899999987543 23447789999999999999999999998654 46899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999997 599998863 458999999999999999999998 899999999999999999999999999998765
Q ss_pred ccccce--eecccCCccccCCCCCC-CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee--
Q 002336 767 EDLTHI--SSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-- 841 (935)
Q Consensus 767 ~~~~~~--~~~~~gt~~y~APE~l~-~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~-- 841 (935)
...... .....||+.|+|||++. ...++.++||||+|+++|+|++|+.||......+.. ..+...+......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHH
Confidence 432221 23346899999999764 456899999999999999999999999754433211 1111111100000
Q ss_pred -------------eccccccc--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 842 -------------SIVDPVLI--GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 842 -------------~~~d~~l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
....+.-. ..........+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00001122368899999999999999999999863
No 213
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-35 Score=326.20 Aligned_cols=260 Identities=21% Similarity=0.274 Sum_probs=197.7
Q ss_pred HHhhcccccccccEEEEEEEE--CCCcEEEEEEccCcch--hhhHHHHHHHHHHHhc---CCCcccccceeee-----cc
Q 002336 614 TNNFCKKIGKGSFGSVYYGKM--KDGKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 681 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~--~~g~~vAvK~~~~~~~--~~~~~~~~E~~iL~~L---~HpnIv~l~g~~~-----~~ 681 (935)
.|++.+.||+|+||.||+|.+ .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 356788999999999999998 3688999999864322 2234677888887776 8999999999987 56
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccc
Q 002336 682 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 761 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGl 761 (935)
...++||||++ |+|.+++... ....+++..+..++.|+++||.|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 67899999997 6999998754 23458999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCC--
Q 002336 762 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD-- 839 (935)
Q Consensus 762 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~-- 839 (935)
++....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+........
T Consensus 167 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQMA--LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGGG--GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGG
T ss_pred cccccCCCC--ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcc
Confidence 987643321 233468999999999988889999999999999999999999997443221 1111111111000
Q ss_pred -eeec-------cc---ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 840 -VISI-------VD---PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 840 -~~~~-------~d---~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.... .. ..............+.+++.+||+.+|++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00 00000111222346789999999999999999999985
No 214
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-35 Score=358.72 Aligned_cols=246 Identities=25% Similarity=0.334 Sum_probs=201.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+++.+.||+|+||.||+|+++ +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~ 421 (674)
T 3pfq_A 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421 (674)
T ss_dssp TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEE
T ss_pred ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEE
Confidence 4667889999999999999876 58899999987532 23346688899999988 7999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+||||+.++++||+|||+++.....
T Consensus 422 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 422 EYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred eCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999984 3569999999999999999999998 89999999999999999999999999999864332
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.. .+ . +.+..+..
T Consensus 496 ~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~---~~---~-~~i~~~~~-------- 559 (674)
T 3pfq_A 496 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---EL---F-QSIMEHNV-------- 559 (674)
T ss_dssp TC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---H-HHHHSSCC--------
T ss_pred Cc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH---HH---H-HHHHhCCC--------
Confidence 22 233456999999999999999999999999999999999999999743321 11 1 12222211
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 883 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~ev~~ 883 (935)
.++......+.+++.+||+.||++||++ +||.+
T Consensus 560 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1122233468899999999999999997 66654
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5.1e-35 Score=320.57 Aligned_cols=249 Identities=26% Similarity=0.311 Sum_probs=199.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---------hhhhHHHHHHHHHHHhcC-CCcccccceeeeccc
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---------SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH 682 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~---------~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~ 682 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+++++++. ||||+++++++....
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 3556789999999999999986 68999999986432 122456889999999995 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccc
Q 002336 683 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 762 (935)
Q Consensus 683 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla 762 (935)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999974 4568999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccceeecccCCccccCCCCCC------CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 836 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~------~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~ 836 (935)
........ .....|++.|+|||.+. ...++.++||||||+++++|++|+.||...... .. . ..+.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~---~-~~~~ 242 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LM---L-RMIM 242 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---H-HHHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HH---H-HHHh
Confidence 87644322 22345899999999873 457889999999999999999999999743221 11 1 1122
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 837 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 837 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.+.... ..+ ........+.+++.+||+.+|++||+++|+++
T Consensus 243 ~~~~~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQF-GSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCCC-CTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCccc-Ccc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 221110 000 01122346889999999999999999999875
No 216
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.1e-35 Score=358.72 Aligned_cols=261 Identities=25% Similarity=0.403 Sum_probs=206.3
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccceE
Q 002336 610 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 684 (935)
Q Consensus 610 l~~~~~~~~~~LG~G~fG~Vy~~~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~ 684 (935)
+....+++.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 334556778999999999999998752 4679999987543 3344679999999999999999999999854 568
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999743 4468999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
.............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .... .+..+....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~----~i~~~~~~~- 612 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIG----RIENGERLP- 612 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHHTCCCC-
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHH----HHHcCCCCC-
Confidence 65443333333457789999999988889999999999999999997 99999743221 1111 122221111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhc
Q 002336 844 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 892 (935)
Q Consensus 844 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~ 892 (935)
. +......+.+++.+||+.+|++||++.||++.|+++...+
T Consensus 613 ----~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ----M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----C----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1 1122346889999999999999999999999999987654
No 217
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.3e-35 Score=325.63 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=201.2
Q ss_pred HHHhhcccccccccEEEEEEEE-C-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCC------cccccceeeeccceE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR------NLVPLIGYCEEEHQR 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~-~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hp------nIv~l~g~~~~~~~~ 684 (935)
..|++.+.||+|+||.||+|.. . +++.||||++... ....+.+.+|+++++.++|+ +++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4567789999999999999987 3 6889999998754 34456788999999998765 499999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC--------------
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-------------- 750 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~-------------- 750 (935)
++||||+ +++|.+++... ....+++..+..++.|+++||+|||+ ++|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 9999999 89999998754 23468999999999999999999998 89999999999999987
Q ss_pred -----CCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccch
Q 002336 751 -----NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 825 (935)
Q Consensus 751 -----~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~ 825 (935)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+..+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 668999999999865432 22346899999999999989999999999999999999999999754332211
Q ss_pred hHHHHHHHh-----hhcCCeeec---------------------ccccc-cCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002336 826 NIVHWARSM-----IKKGDVISI---------------------VDPVL-IGNVKIESIWRIAEVAIQCVEQRGFSRPKM 878 (935)
Q Consensus 826 ~l~~~~~~~-----i~~~~~~~~---------------------~d~~l-~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 878 (935)
......... ......... ..+.. ...........+.+++.+||+.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111110000 000000000 00000 001123445678999999999999999999
Q ss_pred HHHHHH
Q 002336 879 QEIVLA 884 (935)
Q Consensus 879 ~ev~~~ 884 (935)
+|+++.
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999753
No 218
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-34 Score=342.77 Aligned_cols=250 Identities=27% Similarity=0.373 Sum_probs=198.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-------------hhhHHHHHHHHHHHhcCCCcccccceee
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 678 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~E~~iL~~L~HpnIv~l~g~~ 678 (935)
..|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34677899999999999999986 578999999865321 2246788999999999999999999999
Q ss_pred eccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC---cEE
Q 002336 679 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 755 (935)
Q Consensus 679 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~---~vk 755 (935)
.+....++||||+++|+|.+.+.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999998873 4569999999999999999999998 8999999999999998776 699
Q ss_pred EeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhh
Q 002336 756 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 835 (935)
Q Consensus 756 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i 835 (935)
|+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .. ...+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~----~~~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DI----IKKV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH----HHHH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HH----HHHH
Confidence 999999987654322 233569999999998874 6899999999999999999999999743321 11 1222
Q ss_pred hcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 836 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 836 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+.... +...... ....+.+++.+||+.+|++|||++|+++.
T Consensus 260 ~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2222110 0000011 12368899999999999999999999753
No 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.8e-35 Score=329.65 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=189.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeeccc------eE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~------~~ 684 (935)
.|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 3566789999999999999875 6889999998653 2334567889999999999999999999987654 78
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||++ ++|.+.+. ..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999997 47888875 248899999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHH----------------
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV---------------- 828 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~---------------- 828 (935)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+........
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 54322 123346899999999999889999999999999999999999999754321110000
Q ss_pred HHHHHhhhcCCe------eecccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 829 HWARSMIKKGDV------ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 829 ~~~~~~i~~~~~------~~~~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
..+......... ............ .......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000000 000000000000 11224578999999999999999999999874
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=324.80 Aligned_cols=248 Identities=24% Similarity=0.400 Sum_probs=191.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeec------cceEEE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRIL 686 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~------~~~~~l 686 (935)
|++.+.||+|+||.||+|.+. +|+.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. ....++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 556789999999999999985 68999999986542 3456789999999999 79999999999876 467899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||+++++|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 99999999999999754 23568999999999999999999998 899999999999999999999999999987654
Q ss_pred ccccceeecccCCccccCCCCCC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 767 EDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
.... ......|++.|+|||.+. +..++.++||||||+++|+|++|+.||....... . ... +......
T Consensus 181 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~-~~~~~~~ 252 (326)
T 2x7f_A 181 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---A---LFL-IPRNPAP 252 (326)
T ss_dssp -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHH-HHHSCCC
T ss_pred cCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---H---HHH-hhcCccc
Confidence 3221 122345899999999886 5678899999999999999999999996332211 1 111 1111111
Q ss_pred ecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 842 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 842 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.... ..+ ...+.+++.+||..+|++||+++|+++
T Consensus 253 ~~~~----~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 253 RLKS----KKW----SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCSC----SCS----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCCc----ccc----CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 111 236889999999999999999999987
No 221
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.4e-34 Score=327.59 Aligned_cols=268 Identities=21% Similarity=0.320 Sum_probs=201.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-----------CCcccccceeeec
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCEE 680 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-----------HpnIv~l~g~~~~ 680 (935)
..|.+.+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 45677899999999999999874 6899999998753 334567889999999886 8999999999876
Q ss_pred cc----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCcccc------
Q 002336 681 EH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD------ 749 (935)
Q Consensus 681 ~~----~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld------ 749 (935)
.. ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCc
Confidence 54 789999999 89999998754 24558999999999999999999998 7 999999999999994
Q ss_pred CCCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHH
Q 002336 750 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 829 (935)
Q Consensus 750 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~ 829 (935)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++||||||+++|||++|+.||.............
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 44579999999998765432 23468999999999988889999999999999999999999998443221111111
Q ss_pred HHHHhhh-cCCeee--------------------cccc--------cc--cCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002336 830 WARSMIK-KGDVIS--------------------IVDP--------VL--IGNVKIESIWRIAEVAIQCVEQRGFSRPKM 878 (935)
Q Consensus 830 ~~~~~i~-~~~~~~--------------------~~d~--------~l--~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 878 (935)
.+...+. .+.... .+.. .+ ....+......+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1111110 000000 0000 00 012345667789999999999999999999
Q ss_pred HHHHH--HHhhhhh
Q 002336 879 QEIVL--AIQDSIK 890 (935)
Q Consensus 879 ~ev~~--~L~~~~~ 890 (935)
+|+++ .+++...
T Consensus 329 ~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 329 GGLVNHPWLKDTLG 342 (373)
T ss_dssp HHHHTCGGGTTCTT
T ss_pred HHHhhChhhhcccC
Confidence 99987 3444433
No 222
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-35 Score=328.58 Aligned_cols=250 Identities=21% Similarity=0.333 Sum_probs=195.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHH-HHhcCCCcccccceeeeccceEEEEEEe
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~i-L~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.+++.+.||+|+||.||+|... +|+.||||++.... .....++..|..+ ++.++||||+++++++...+..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 3556788999999999999874 78999999987542 2334556666665 7778999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 691 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 691 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
+++ +|.+++.... ....+++..++.++.|+++||+|||+ + +|+||||||+|||++.++.+||+|||+++.....
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 975 9988876321 35679999999999999999999997 5 9999999999999999999999999999765432
Q ss_pred ccceeecccCCccccCCCCCC----CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 769 LTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~----~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
.. .....||+.|+|||++. ...++.++||||||+++|||++|+.||...... ...+...+..... ...
T Consensus 208 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~-~~~ 279 (340)
T 3an0_A 208 VA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSP-QLP 279 (340)
T ss_dssp HH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCC-CCC
T ss_pred cc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-----HHHHHHHhcCCCC-CCC
Confidence 21 22246899999999853 457899999999999999999999999732221 1112222222111 110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.......+.+++.+||+.+|++||+++|+++
T Consensus 280 --------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 --------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0112346889999999999999999999976
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-34 Score=317.75 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=191.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec-----------
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 680 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~----------- 680 (935)
..|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45667899999999999999975 7999999998643 3445789999999999999999999998754
Q ss_pred --cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEee
Q 002336 681 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 758 (935)
Q Consensus 681 --~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~D 758 (935)
....++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 45689999999999999999752 3567889999999999999999998 8999999999999999999999999
Q ss_pred ccccccccccc-------------cceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccc
Q 002336 759 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 824 (935)
Q Consensus 759 FGla~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~ 824 (935)
||++....... ........|++.|+|||.+.+. .++.++||||||+++|||++ ||... ..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--~~- 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--ME- 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--HH-
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--hh-
Confidence 99998654321 1112234589999999998754 78999999999999999998 55311 11
Q ss_pred hhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 825 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 825 ~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
...... .+.... ..+....+......+.+++.+||+.||++|||++|+++
T Consensus 234 --~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 234 --RVNILK-KLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HHHHHH-HHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --HHHHHH-hccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111 121111 11112223333456889999999999999999999986
No 224
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-35 Score=336.10 Aligned_cols=258 Identities=22% Similarity=0.244 Sum_probs=192.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec------------
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------------ 680 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~------------ 680 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ....+|+++|+.++||||+++++++..
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 4567889999999999999874 78999999986542 233479999999999999999999843
Q ss_pred --------------------------cceEEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhHHhhhcCC
Q 002336 681 --------------------------EHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCN 733 (935)
Q Consensus 681 --------------------------~~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLHs~~~ 733 (935)
....++||||++ |+|.+.+.... ....+++..+..++.|+++||+|||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--- 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--- 159 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 334789999998 58777665321 45679999999999999999999997
Q ss_pred CceEecCCCCCCcccc-CCCcEEEeeccccccccccccceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHh
Q 002336 734 PGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELIS 811 (935)
Q Consensus 734 ~~ivH~DLkp~NILld-~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLlt 811 (935)
.+|+||||||+|||++ .++.+||+|||+++....... .....+|+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 8999999999999998 689999999999987644332 2234589999999987664 58999999999999999999
Q ss_pred CCCCCCccCcccchhHHHHHHHhhhc----------CCeeecccccc-----cCCCCHHHHHHHHHHHHHccccCCCCCC
Q 002336 812 GKKPVSVEDFGAELNIVHWARSMIKK----------GDVISIVDPVL-----IGNVKIESIWRIAEVAIQCVEQRGFSRP 876 (935)
Q Consensus 812 G~~Pf~~~~~~~~~~l~~~~~~~i~~----------~~~~~~~d~~l-----~~~~~~~~~~~l~~li~~Cl~~dP~~RP 876 (935)
|+.||......+ .+...++ .... .......-+.. ....+......+.+++.+||+.+|++||
T Consensus 238 g~~pf~~~~~~~--~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 238 GKPLFSGETSID--QLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp SSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred CCCCCCCCChHH--HHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 999997543221 1111111 1100 00000000000 0011122334688999999999999999
Q ss_pred CHHHHHHH
Q 002336 877 KMQEIVLA 884 (935)
Q Consensus 877 s~~ev~~~ 884 (935)
|+.|+++.
T Consensus 315 t~~e~l~h 322 (383)
T 3eb0_A 315 NPYEAMAH 322 (383)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999853
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=325.69 Aligned_cols=259 Identities=21% Similarity=0.281 Sum_probs=190.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeee-------------
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE------------- 679 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~------------- 679 (935)
.|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 3556789999999999999987 48999999987766666788999999999999999999998873
Q ss_pred -ccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc-CCCcEEEe
Q 002336 680 -EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVS 757 (935)
Q Consensus 680 -~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld-~~~~vkL~ 757 (935)
+....++||||++ |+|.+++. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++ +++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 69999986 3568999999999999999999998 8999999999999997 56799999
Q ss_pred eccccccccccccc--eeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHh
Q 002336 758 DFGLSRQAEEDLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 834 (935)
Q Consensus 758 DFGla~~~~~~~~~--~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 834 (935)
|||+++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ...+...
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~ 240 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ---MQLILES 240 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHh
Confidence 99999876432211 1223457899999998754 6789999999999999999999999974432111 1111000
Q ss_pred hhc----------CCeeeccccccc-CC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 835 IKK----------GDVISIVDPVLI-GN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 835 i~~----------~~~~~~~d~~l~-~~-----~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
... ......+..... .. ........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 000000000000 00 00112346889999999999999999999976
No 226
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.5e-35 Score=336.64 Aligned_cols=198 Identities=26% Similarity=0.328 Sum_probs=171.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhc------CCCcccccceeeeccceEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L------~HpnIv~l~g~~~~~~~~~ 685 (935)
..|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+++++.+ +|+||+++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 34677899999999999999876 5899999999754 33446778899888887 5779999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc--EEEeeccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSR 763 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~--vkL~DFGla~ 763 (935)
+||||+. ++|.+++... ....+++..+..++.||++||+|||+ ++|+||||||+|||++.++. +||+|||+++
T Consensus 176 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999996 6999988754 23458999999999999999999998 89999999999999999887 9999999997
Q ss_pred cccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccC
Q 002336 764 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 820 (935)
Q Consensus 764 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~ 820 (935)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 65432 223468999999999998899999999999999999999999997544
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=332.06 Aligned_cols=200 Identities=25% Similarity=0.383 Sum_probs=154.0
Q ss_pred Hhh-cccccccccEEEEEEEEC---CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeee--ccceEEEEE
Q 002336 615 NNF-CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 688 (935)
Q Consensus 615 ~~~-~~~LG~G~fG~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~--~~~~~~lV~ 688 (935)
+++ .++||+|+||.||+|.++ +++.||||++.... ....+.+|+.+|++++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 344 568999999999999976 57899999987542 2356889999999999999999999994 477899999
Q ss_pred EecCCCCHHHHhccCC------CCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc----cCCCcEEEee
Q 002336 689 EYMHNGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSD 758 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl----d~~~~vkL~D 758 (935)
||++ ++|.+.+.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 57877765211 22358999999999999999999998 899999999999999 6789999999
Q ss_pred cccccccccccc--ceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccC
Q 002336 759 FGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVED 820 (935)
Q Consensus 759 FGla~~~~~~~~--~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~ 820 (935)
||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 999987654321 12234568999999998876 468999999999999999999999997443
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-35 Score=335.93 Aligned_cols=255 Identities=21% Similarity=0.303 Sum_probs=180.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--chhhhHHHHHHHHHHHhcCCCcccccceeeecc------ceE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~------~~~ 684 (935)
.|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... ...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 4567789999999999999865 6899999998653 233457788999999999999999999998653 567
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 110 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 9999999 7899888863 569999999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
.... .....||+.|+|||++.+ ..++.++||||+||+++||++|+.||.+.+..+. ...+.+.+... ..+.
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p-~~~~ 253 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTP-GAEL 253 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSC-CHHH
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCC-CHHH
Confidence 5432 223468999999998876 6889999999999999999999999975433211 11111111100 0000
Q ss_pred ccc-----------ccc--CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 844 VDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 844 ~d~-----------~l~--~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
+.. .+. ...+ ......+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 000 0000 0112367899999999999999999999864
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-34 Score=319.69 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=193.6
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCc--chhhhHHHHHHHHHHHhcC--CCcccccceeeeccceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~iL~~L~--HpnIv~l~g~~~~~~~~~lV~ 688 (935)
..|++.+.||+|+||.||++...+++.||+|++... .....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 346678899999999999999988999999998643 2344578999999999997 599999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
| +.+++|.+++.. ...+++..++.++.|+++||.|||+ ++|+||||||+|||+++ +.+||+|||+++.....
T Consensus 108 e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 108 E-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp C-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred e-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 9 668899999984 4578999999999999999999998 89999999999999964 89999999999876443
Q ss_pred ccc-eeecccCCccccCCCCCCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh
Q 002336 769 LTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 836 (935)
Q Consensus 769 ~~~-~~~~~~gt~~y~APE~l~~-----------~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~ 836 (935)
... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ........+.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~ 254 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIID 254 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHC
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHh
Confidence 221 1233468999999998765 4788999999999999999999999973221 1111222222
Q ss_pred cCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 837 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 837 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.... ...+......+.+++.+||+.+|++||+++|+++.
T Consensus 255 ~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccc---------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111 11111112468899999999999999999999863
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.6e-35 Score=338.92 Aligned_cols=259 Identities=24% Similarity=0.264 Sum_probs=191.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeecc------ceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~------~~~~l 686 (935)
.|++.+.||+|+||.||+|++. +|+.||||++.... ..+.+|+++|+.++||||+++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 3566789999999999999986 58999999986532 2345799999999999999999988432 23679
Q ss_pred EEEecCCCCHHHHhccC-CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC-CcEEEeecccccc
Q 002336 687 VYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQ 764 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~-~~vkL~DFGla~~ 764 (935)
||||+++ +|.+.+... .....+++..+..++.||++||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 565554321 135679999999999999999999998 899999999999999965 6689999999987
Q ss_pred ccccccceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHh-------hh
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-------IK 836 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~-------i~ 836 (935)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+.++.. +.
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHH
Confidence 543322 2234689999999988654 7899999999999999999999999754321 1222222110 00
Q ss_pred --cCCeeecccccccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 837 --KGDVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 837 --~~~~~~~~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.....+..-+.+.. .++......+.+++.+||+.||++||++.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00111111111100 0111223468899999999999999999999863
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.8e-35 Score=330.73 Aligned_cols=262 Identities=19% Similarity=0.252 Sum_probs=184.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeeccce-------E
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ-------R 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~-------~ 684 (935)
..|++.+.||+|+||.||+|.+. +|+.||||++... ......+.+|++.++.++||||+++++++..... .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 34566889999999999999985 6899999988653 2334567788888999999999999999865333 7
Q ss_pred EEEEEecCCCCHHHHhcc-CCCCCCCCHHHHHHHHHHHHHHhHHhh--hcCCCceEecCCCCCCccccC-CCcEEEeecc
Q 002336 685 ILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVSDFG 760 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~gL~yLH--s~~~~~ivH~DLkp~NILld~-~~~vkL~DFG 760 (935)
++||||+++ +|.+.+.. ......+++..+..++.|++.||.||| + ++|+||||||+|||++. ++.+||+|||
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 899999986 44443321 224567899999999999999999999 7 89999999999999996 8999999999
Q ss_pred ccccccccccceeecccCCccccCCCCCCCC-CCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC-
Q 002336 761 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG- 838 (935)
Q Consensus 761 la~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~- 838 (935)
+++....... .....||+.|+|||++.+. .++.++||||||+++|||++|+.||....... .+....+ .....
T Consensus 178 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~~~~-~~~~~~ 252 (360)
T 3e3p_A 178 SAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHEIVR-VLGCPS 252 (360)
T ss_dssp TCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCC
T ss_pred CceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHHHHH-HcCCCC
Confidence 9987654332 2234589999999988654 58999999999999999999999997543221 1111111 11000
Q ss_pred -----------Ceeeccc------ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 839 -----------DVISIVD------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 839 -----------~~~~~~d------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
......+ ..............+.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000 000011112234578999999999999999999999763
No 232
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.7e-35 Score=327.83 Aligned_cols=258 Identities=21% Similarity=0.249 Sum_probs=194.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeecc-----ceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~-----~~~~l 686 (935)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 3556789999999999999986 68999999986543 23456788999999999999999999987654 67899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||+. ++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 999997 689998873 468999999999999999999998 899999999999999999999999999998764
Q ss_pred ccccc---------eeecccCCccccCCCCCC-CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhh
Q 002336 767 EDLTH---------ISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 836 (935)
Q Consensus 767 ~~~~~---------~~~~~~gt~~y~APE~l~-~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~ 836 (935)
..... ......||+.|+|||++. +..++.++||||||+++|+|++|+.||...+..... ..+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL---LLIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHHHhC
Confidence 32211 112245899999999764 478899999999999999999999999754322111 11111110
Q ss_pred cCCeee------------cc-------cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 837 KGDVIS------------IV-------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 837 ~~~~~~------------~~-------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
...... .+ ...+. .........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLE-KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHH-HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchh-hhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 00 00000 000122346789999999999999999999976
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.5e-34 Score=324.14 Aligned_cols=199 Identities=28% Similarity=0.319 Sum_probs=169.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CC-----cccccceeeeccceEEE
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-Hp-----nIv~l~g~~~~~~~~~l 686 (935)
.|++.+.||+|+||.||+|... +++.||||+++.. ......+..|+.+++.++ |+ +|+++++++...+..++
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 133 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL 133 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence 4667889999999999999876 6889999998753 334567788999998885 55 48999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc--CCCcEEEeecccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSRQ 764 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld--~~~~vkL~DFGla~~ 764 (935)
||||+. ++|.+++... ....+++..+..++.|++.||.|||+. +.+|+||||||+|||++ .++.+||+|||+++.
T Consensus 134 v~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 999996 5999998754 235689999999999999999999941 37999999999999994 578899999999987
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccC
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 820 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~ 820 (935)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 211 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 211 LGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp TTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 64432 23468999999999999899999999999999999999999998543
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.2e-34 Score=325.39 Aligned_cols=254 Identities=21% Similarity=0.298 Sum_probs=192.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceE------
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR------ 684 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~------ 684 (935)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 4566789999999999999876 68999999987542 23357789999999999999999999999876654
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 123 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 68888874 348999999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeec
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 843 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~ 843 (935)
.... .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+. ...+....... ..+.
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~-~~~~ 265 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVP-GTEF 265 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCC-CHHH
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCC-cHHH
Confidence 5432 223468999999998876 7889999999999999999999999975432211 11111100000 0000
Q ss_pred c---------------cccccC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 844 V---------------DPVLIG---NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 844 ~---------------d~~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
. ...... .........+.+++.+||+.||++|||++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 000000 0001123468899999999999999999999764
No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.4e-34 Score=322.06 Aligned_cols=252 Identities=26% Similarity=0.342 Sum_probs=175.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch-hhhHHHHHHHH-HHHhcCCCcccccceeeeccceEEEEEEec
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEYM 691 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~-iL~~L~HpnIv~l~g~~~~~~~~~lV~E~~ 691 (935)
+++.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++...+..++||||+
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~ 103 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeec
Confidence 456789999999999999986 789999999876432 33445666666 677789999999999999999999999999
Q ss_pred CCCCHHHHhccC--CCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 692 HNGTLRDRLHGS--VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 692 ~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
++ +|.+++... .....+++..+.+++.|+++||.|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 104 ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 75 787776521 124678999999999999999999998 6 9999999999999999999999999999876443
Q ss_pred ccceeecccCCccccCCCCC----CCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 769 LTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l----~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
.. .....|++.|+|||.+ .+..++.++||||||+++|+|++|+.||...... .+.... +..+..
T Consensus 180 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~-~~~~~~---- 247 (327)
T 3aln_A 180 IA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQ-VVKGDP---- 247 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSCC----
T ss_pred cc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHH-HhcCCC----
Confidence 22 2223589999999998 4567899999999999999999999999732211 000100 111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+.+...........+.+++.+||+.||++||++.|+++
T Consensus 248 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 -PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111122346889999999999999999999976
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-34 Score=324.20 Aligned_cols=259 Identities=20% Similarity=0.264 Sum_probs=197.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CC-cEEEEEEccCcchhhhHHHHHHHHHHHhcCCCc------ccccceeeeccce
Q 002336 612 EATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEEEHQ 683 (935)
Q Consensus 612 ~~~~~~~~~LG~G~fG~Vy~~~~~-~g-~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hpn------Iv~l~g~~~~~~~ 683 (935)
...|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 345777899999999999999875 34 68999998754 344567888999999997665 8889999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccc---------------
Q 002336 684 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--------------- 748 (935)
Q Consensus 684 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILl--------------- 748 (935)
.++||||+ +++|.+.+... ....+++.+++.++.|+++||+|||+ ++|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccc
Confidence 99999999 66777766543 23568999999999999999999998 899999999999999
Q ss_pred ----cCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccc
Q 002336 749 ----DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 824 (935)
Q Consensus 749 ----d~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~ 824 (935)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 567899999999998654322 234689999999999998999999999999999999999999974432211
Q ss_pred hhHHHHHHHhhhc--------CCeeecc-c-------------------cccc--CCCCHHHHHHHHHHHHHccccCCCC
Q 002336 825 LNIVHWARSMIKK--------GDVISIV-D-------------------PVLI--GNVKIESIWRIAEVAIQCVEQRGFS 874 (935)
Q Consensus 825 ~~l~~~~~~~i~~--------~~~~~~~-d-------------------~~l~--~~~~~~~~~~l~~li~~Cl~~dP~~ 874 (935)
. ..+...... ....... . +.+. ..........+.+++.+||+.||++
T Consensus 248 ~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 248 L---VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp H---HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred H---HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 1 111111100 0000000 0 0000 0112233457889999999999999
Q ss_pred CCCHHHHHH
Q 002336 875 RPKMQEIVL 883 (935)
Q Consensus 875 RPs~~ev~~ 883 (935)
|||++|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999974
No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.4e-34 Score=311.88 Aligned_cols=253 Identities=26% Similarity=0.350 Sum_probs=201.4
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccceEE
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 685 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~ 685 (935)
......|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++......+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 334567788999999999999999986 68999999986532 234567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC---CcEEEeecccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 762 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~---~~vkL~DFGla 762 (935)
+||||+++++|.+.+.. ...+++..++.++.|+++||.|||+ ++++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998863 3468999999999999999999998 899999999999999754 46999999998
Q ss_pred ccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 763 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 763 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
........ .....|++.|+|||.+.+. ++.++||||||+++|+|++|+.||...... .. . ..+..+....
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~---~-~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY---DI---L-KRVETGKYAF 241 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---H-HHHHHCCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HH---H-HHHHcCCCCC
Confidence 86544322 1223478899999988764 899999999999999999999999743221 11 1 1222222111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.. ..... ....+.+++.+||+.+|++|||++|+++
T Consensus 242 ~~--~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL--PQWRT----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS--GGGTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc--hhhhh----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00011 1236889999999999999999999987
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=324.85 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=192.1
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeeeccce------EE
Q 002336 615 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------RI 685 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~------~~ 685 (935)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..... .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 556789999999999999875 68999999986532 2335678999999999999999999999977653 49
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 686 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 686 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
+||||++ ++|.+.+. ..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 106 lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 9999997 68887764 348999999999999999999998 89999999999999999999999999999865
Q ss_pred cccccceeecccCCccccCCCCCCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcC------
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG------ 838 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~------ 838 (935)
... .....+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+. ...+.......
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHT
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHH
Confidence 432 223458999999998876 6789999999999999999999999975432211 11111110000
Q ss_pred ------------CeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002336 839 ------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 884 (935)
Q Consensus 839 ------------~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~ 884 (935)
.......+.+ ..........+.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000 01112233478899999999999999999999753
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.2e-34 Score=318.09 Aligned_cols=249 Identities=20% Similarity=0.273 Sum_probs=169.4
Q ss_pred Hhh-cccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcccccceeeec----cceEEEEE
Q 002336 615 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 688 (935)
Q Consensus 615 ~~~-~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~----~~~~~lV~ 688 (935)
|.+ .+.||+|+||.||+|.+. +|+.||||++.... ....+....++.++||||+++++++.. ....++||
T Consensus 30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 455 346999999999999887 68999999986532 112223334566799999999999865 45589999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeeccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQA 765 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFGla~~~ 765 (935)
||+++|+|.+++... ....+++.+++.++.|+++||+|||+ ++|+||||||+|||++. ++.+||+|||+++..
T Consensus 106 e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 106 ECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp ECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred eccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999999999854 33579999999999999999999998 89999999999999976 455999999999865
Q ss_pred cccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccc
Q 002336 766 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 845 (935)
Q Consensus 766 ~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d 845 (935)
.... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ .......+..+..
T Consensus 182 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~----- 250 (336)
T 3fhr_A 182 TQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI---SPGMKRRIRLGQY----- 250 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------------
T ss_pred cccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh---hhhHHHhhhcccc-----
Confidence 4322 2234579999999999888999999999999999999999999973322111 0000111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 846 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 846 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.............+.+++.+||+.||++|||++|+++
T Consensus 251 -~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 -GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000001122346889999999999999999999987
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=320.46 Aligned_cols=243 Identities=26% Similarity=0.422 Sum_probs=189.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch------hhhHHHHHHHHHHHhc----CCCccccccee
Q 002336 609 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRI----HHRNLVPLIGY 677 (935)
Q Consensus 609 ~l~~~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~iL~~L----~HpnIv~l~g~ 677 (935)
+.....|++.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344566788999999999999999875 689999999865432 1234567899999998 89999999999
Q ss_pred eeccceEEEEEEe-cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc-CCCcEE
Q 002336 678 CEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAK 755 (935)
Q Consensus 678 ~~~~~~~~lV~E~-~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld-~~~~vk 755 (935)
+...+..++|||+ +.+++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 789999999974 4568999999999999999999998 8999999999999999 889999
Q ss_pred EeeccccccccccccceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHh
Q 002336 756 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 834 (935)
Q Consensus 756 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 834 (935)
|+|||++....... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||.... + .
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~----~ 245 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------E----I 245 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------H----H
Confidence 99999998765432 223458999999998876555 459999999999999999999997211 0 0
Q ss_pred hhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 835 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 835 i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
.. ... .+ +......+.+++.+||+.+|++||+++|+++
T Consensus 246 ~~-~~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 LE-AEL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HH-TCC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hh-hcc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 100 11 1122236789999999999999999999986
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.8e-34 Score=330.18 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=184.3
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEEecCCCCH
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998776677999999998643 235678899999887 89999999999999999999999995 699
Q ss_pred HHHhccCCCCC----CCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCC-------------CcEEEeec
Q 002336 697 RDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSDF 759 (935)
Q Consensus 697 ~~~L~~~~~~~----~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~-------------~~vkL~DF 759 (935)
.+++....... ...+..++.++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997542111 11333467899999999999998 899999999999999754 48999999
Q ss_pred cccccccccccc---eeecccCCccccCCCCCCC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHH
Q 002336 760 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 828 (935)
Q Consensus 760 Gla~~~~~~~~~---~~~~~~gt~~y~APE~l~~-------~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~ 828 (935)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...... . .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~---~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-E---S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-H---H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-H---H
Confidence 999876543221 1223469999999998865 678999999999999999999 99999632211 1 1
Q ss_pred HHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 829 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 829 ~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
........ . +......+......+.+++.+||+.||++|||+.||++
T Consensus 249 ~i~~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFS---L-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCC---C-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCC---c-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111110 0 11111123445568899999999999999999999986
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.7e-34 Score=343.03 Aligned_cols=268 Identities=22% Similarity=0.314 Sum_probs=204.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc-chhhhHHHHHHHHHHHhcCCCcccccceeeec------cceE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~-~~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~------~~~~ 684 (935)
..|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 45788999999999999999875 6899999998764 33445779999999999999999999998765 6678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCc---EEEeeccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGL 761 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~---vkL~DFGl 761 (935)
++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 9999999999999999865555579999999999999999999998 89999999999999997665 99999999
Q ss_pred cccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCee
Q 002336 762 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 841 (935)
Q Consensus 762 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~ 841 (935)
+........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...|.......+...
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchh
Confidence 987654322 2335689999999999999999999999999999999999999973221 122211111111111
Q ss_pred ecccc------------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHhhhhh
Q 002336 842 SIVDP------------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIK 890 (935)
Q Consensus 842 ~~~d~------------~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-----v~~~L~~~~~ 890 (935)
..... .............+.+++.+||..||++|||++| ..+.+++++.
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 11110 0111233446678999999999999999999987 4455555444
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=312.94 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=177.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh-h-hHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEEe
Q 002336 614 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-R-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 690 (935)
Q Consensus 614 ~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~-~-~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E~ 690 (935)
.+++.+.||+|+||.||+|.+. +|+.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 105 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence 3566789999999999999986 6899999998754322 2 23445555678888999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCC-ceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 691 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 691 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~-~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
+ ++.+..+... ....+++..+..++.|+++||.|||+ + +|+||||||+||+++.++.+||+|||++.......
T Consensus 106 ~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 106 M-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp C-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred c-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9 5566555542 24568999999999999999999997 5 99999999999999999999999999997654332
Q ss_pred cceeecccCCccccCCCCCC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 770 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~-----~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
. .....|++.|+|||.+. ...++.++||||||+++|||++|+.||...... .+......... ...
T Consensus 180 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~-~~~-- 249 (318)
T 2dyl_A 180 A--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEE-PPL-- 249 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSC-CCC--
T ss_pred c--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccC-CCC--
Confidence 2 22345899999999984 557889999999999999999999999732211 11122222211 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
+... ......+.+++.+||+.||++||+++|+++
T Consensus 250 ---~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 ---LPGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ---CCSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCcc--CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1000 011236889999999999999999999976
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.5e-34 Score=318.26 Aligned_cols=239 Identities=24% Similarity=0.386 Sum_probs=195.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcchh------hhHHHHHHHHHHHhcC--CCcccccceeeeccce
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQ 683 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~iL~~L~--HpnIv~l~g~~~~~~~ 683 (935)
..|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++ |+||+++++++...+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 44667899999999999999865 6899999998654221 2356778999999996 5999999999999999
Q ss_pred EEEEEEecCC-CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCcccc-CCCcEEEeeccc
Q 002336 684 RILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGL 761 (935)
Q Consensus 684 ~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld-~~~~vkL~DFGl 761 (935)
.++|||++.+ ++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+|||++ +++.+||+|||+
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999986 899999874 4578999999999999999999998 8999999999999999 789999999999
Q ss_pred cccccccccceeecccCCccccCCCCCCCCCC-CchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCe
Q 002336 762 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 840 (935)
Q Consensus 762 a~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~ 840 (935)
++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... . ... +..
T Consensus 197 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~----~~~-~~~ 260 (320)
T 3a99_A 197 GALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------E----IIR-GQV 260 (320)
T ss_dssp CEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----HHH-CCC
T ss_pred cccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------h----hhc-ccc
Confidence 98765432 223458999999998876555 688999999999999999999997321 1 011 110
Q ss_pred eecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 841 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 841 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
...... ...+.+++.+||+.+|++||+++|+++
T Consensus 261 ------~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ------FFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------cccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011112 236889999999999999999999986
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=325.76 Aligned_cols=246 Identities=24% Similarity=0.342 Sum_probs=183.6
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEEEEEecCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
+++.+.||+|+||+||.....+|+.||||++.... ...+.+|+++|+.+ +|||||++++++.+....++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 45568999999999776666679999999986532 23467899999999 79999999999999999999999996
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC-----CCcEEEeecccccccccc
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~-----~~~vkL~DFGla~~~~~~ 768 (935)
|+|.+++... .....+..++.++.|+++||+|||+ ++|+||||||+|||++. ...+||+|||+++.....
T Consensus 102 g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6999998754 2334455678899999999999998 89999999999999953 335889999999876533
Q ss_pred cc--ceeecccCCccccCCCCCC---CCCCCchhHHHHHHHHHHHHHh-CCCCCCccCcccchhHHHHHHHhhhcCCeee
Q 002336 769 LT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 842 (935)
Q Consensus 769 ~~--~~~~~~~gt~~y~APE~l~---~~~~s~ksDVwS~Gvil~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~ 842 (935)
.. .......||+.|+|||++. ...++.++|||||||++|||++ |..||...... . .......... .
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~------~~~~~~~~~~-~ 248 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-Q------ANILLGACSL-D 248 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-H------HHHHTTCCCC-T
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-H------HHHHhccCCc-c
Confidence 21 1223456999999999987 4567889999999999999999 99998522111 0 1111111110 0
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 843 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 843 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
... ........+.+++.+||+.||++|||++||++
T Consensus 249 ~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 CLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000 11223445789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.1e-32 Score=301.50 Aligned_cols=234 Identities=14% Similarity=0.176 Sum_probs=182.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcch---hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEE
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~ 688 (935)
..|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34677889999999999999986 489999999976432 33477999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccc
Q 002336 689 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 768 (935)
Q Consensus 689 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~ 768 (935)
||+++++|.++++. . ....++.+++.|+++||+|||+ ++|+||||||+|||++.++.+||++++
T Consensus 111 e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 99999999999963 2 3556789999999999999998 899999999999999999999998443
Q ss_pred ccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecccccc
Q 002336 769 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 848 (935)
Q Consensus 769 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l 848 (935)
|++ .++.++||||||+++|||++|+.||............ ...+ .+... .
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~~~---~--- 224 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQPI---E--- 224 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSCBC---C---
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccCCC---C---
Confidence 333 3689999999999999999999999854332110000 0000 00000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHhhhhhhcc
Q 002336 849 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 893 (935)
Q Consensus 849 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~~L~~~~~~~~ 893 (935)
...........+.+++.+||+.||++| |++|+++.|++......
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 000111223468899999999999999 99999999999876554
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-33 Score=341.37 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=192.0
Q ss_pred HHHhhcccccccccEEEEEEEEC--CCcEEEEEEccCcc-hhhhHHHHHHHHHHHhcCCCcccccceeeeccce-----E
Q 002336 613 ATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ-----R 684 (935)
Q Consensus 613 ~~~~~~~~LG~G~fG~Vy~~~~~--~g~~vAvK~~~~~~-~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~-----~ 684 (935)
..|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45777899999999999999986 58999999986543 3445678999999999999999999999987655 7
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 685 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 685 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++||||+++++|.+++.. .+++.+++.++.||++||.|||+ ++|+||||||+|||++.+ .+||+|||+++.
T Consensus 160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 999999999999887652 68999999999999999999998 899999999999999975 899999999987
Q ss_pred ccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeecc
Q 002336 765 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 844 (935)
Q Consensus 765 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 844 (935)
.... ....||+.|+|||++.+.. +.++|||||||++++|++|..|+........ .
T Consensus 231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------------~ 285 (681)
T 2pzi_A 231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------------P 285 (681)
T ss_dssp TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-------------------C
T ss_pred cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-------------------c
Confidence 6443 2346899999999886654 8999999999999999999988763211100 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHhhhh
Q 002336 845 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSI 889 (935)
Q Consensus 845 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-s~~ev~~~L~~~~ 889 (935)
...........+.+++.+||+.||++|| +++++...|....
T Consensus 286 ----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 286 ----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000011234688999999999999999 5677777776554
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=9.5e-32 Score=295.46 Aligned_cols=220 Identities=22% Similarity=0.311 Sum_probs=173.6
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHH-HhcCCCcccccceeeec----cceEEEEEEecC
Q 002336 619 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILVYEYMH 692 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL-~~L~HpnIv~l~g~~~~----~~~~~lV~E~~~ 692 (935)
+.||+|+||.||+|... +++.||+|++.. ...+.+|+.++ +.++||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 77999999999999875 689999999864 24567888888 55589999999999876 677899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccC---CCcEEEeeccccccccccc
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~---~~~vkL~DFGla~~~~~~~ 769 (935)
+|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--- 171 (299)
T 3m2w_A 99 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--- 171 (299)
T ss_dssp SCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---
T ss_pred CCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---
Confidence 99999999854 34569999999999999999999998 89999999999999998 7889999999986432
Q ss_pred cceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCCccCcccchhHHHHHHHhhhcCCeeeccccccc
Q 002336 770 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 849 (935)
Q Consensus 770 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~ 849 (935)
+..++.++||||||+++|||++|+.||........ .......+.....
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~~~~~- 219 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIRMGQY- 219 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTCC-
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHhhccc-
Confidence 23467899999999999999999999973322110 0000000000000
Q ss_pred CCCC----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 850 GNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 850 ~~~~----~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
..+ ......+.+++.+||+.||++|||++|+++
T Consensus 220 -~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 220 -EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011 112347889999999999999999999986
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.8e-32 Score=315.69 Aligned_cols=237 Identities=16% Similarity=0.119 Sum_probs=177.3
Q ss_pred hcccccccccEEEEEEEEC-CCcEEEEEEccCcchh---hhHHHHHHHHHHHhcCC-Cccccccee--------------
Q 002336 617 FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH---RTQQFVTEVALLSRIHH-RNLVPLIGY-------------- 677 (935)
Q Consensus 617 ~~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~E~~iL~~L~H-pnIv~l~g~-------------- 677 (935)
..+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+.+++.++| +|......+
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 4678999999999999965 7999999998743222 35779999999999977 332221111
Q ss_pred -------eec-----cceEEEEEEecCCCCHHHHhcc----CCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCC
Q 002336 678 -------CEE-----EHQRILVYEYMHNGTLRDRLHG----SVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDV 741 (935)
Q Consensus 678 -------~~~-----~~~~~lV~E~~~~gsL~~~L~~----~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DL 741 (935)
+.. ....+++|+.+ +++|.++++. ...+..+++..++.++.|+++||+|||+ ++|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCc
Confidence 111 12346667665 6899988841 1134567888999999999999999998 89999999
Q ss_pred CCCCccccCCCcEEEeeccccccccccccceeecccCCccccCCCCC----------CCCCCCchhHHHHHHHHHHHHHh
Q 002336 742 KSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLELIS 811 (935)
Q Consensus 742 kp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l----------~~~~~s~ksDVwS~Gvil~eLlt 811 (935)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998865443 233457 999999998 66678899999999999999999
Q ss_pred CCCCCCccCcccchhHHHHHHHhhhcCCeeecccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002336 812 GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 883 (935)
Q Consensus 812 G~~Pf~~~~~~~~~~l~~~~~~~i~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev~~ 883 (935)
|+.||......... ..++.. .... ...+.+++.+||+.+|++||++.|+++
T Consensus 313 g~~Pf~~~~~~~~~---------------~~~~~~--~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 313 ADLPNTDDAALGGS---------------EWIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SSCCCCTTGGGSCS---------------GGGGSS--CCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcchhhhH---------------HHHHhh--cccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999743321110 011110 0112 246889999999999999999877743
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=9.5e-33 Score=308.65 Aligned_cols=242 Identities=18% Similarity=0.215 Sum_probs=182.5
Q ss_pred HHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcch--------hhhHHHHHHHHHHHhcC---------------
Q 002336 611 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIH--------------- 667 (935)
Q Consensus 611 ~~~~~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~iL~~L~--------------- 667 (935)
....|++.+.||+|+||.||+|++ +|+.||||++..... ...+.+.+|+.+++.++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 356788899999999999999998 589999999875421 22367889999999886
Q ss_pred -----------CCcccccceeeec-------------cceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 002336 668 -----------HRNLVPLIGYCEE-------------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAK 723 (935)
Q Consensus 668 -----------HpnIv~l~g~~~~-------------~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~ 723 (935)
||||+++++++.+ .+..++||||+++|++.+.+. +..+++..+..++.||+.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHHH
Confidence 5555555555544 678999999999997766664 256899999999999999
Q ss_pred HhHHhh-hcCCCceEecCCCCCCccccCCC--------------------cEEEeeccccccccccccceeecccCCccc
Q 002336 724 GLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGY 782 (935)
Q Consensus 724 gL~yLH-s~~~~~ivH~DLkp~NILld~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~y 782 (935)
||+||| + ++|+||||||+|||++.++ .+||+|||+++..... ...||+.|
T Consensus 173 aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 7 8999999999999999887 8999999999876532 23589999
Q ss_pred cCCCCCCCCCCCchhHHHHHHHH-HHHHHhCCCCCCccCcccchhHHHHHHHhhh-cCCeeecccccccCCCCHHHHHHH
Q 002336 783 LDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWARSMIK-KGDVISIVDPVLIGNVKIESIWRI 860 (935)
Q Consensus 783 ~APE~l~~~~~s~ksDVwS~Gvi-l~eLltG~~Pf~~~~~~~~~~l~~~~~~~i~-~~~~~~~~d~~l~~~~~~~~~~~l 860 (935)
+|||++.+.. +.++||||++++ .+++++|..||... .........+. ..... ..............+
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRKI 312 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHHH
Confidence 9999998766 899999998777 77788899988511 00011111111 11110 000111123455689
Q ss_pred HHHHHHccccCCCCCCCHHHHH
Q 002336 861 AEVAIQCVEQRGFSRPKMQEIV 882 (935)
Q Consensus 861 ~~li~~Cl~~dP~~RPs~~ev~ 882 (935)
.+++.+||+.+ |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999866 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=5.1e-27 Score=280.19 Aligned_cols=186 Identities=17% Similarity=0.141 Sum_probs=130.5
Q ss_pred ccccccccEEEEEEEE-CCCcEEEEEEccCcc----------hhhhHHHHHHHHHHHhc-CCCcccccceeeeccceEEE
Q 002336 619 KKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 686 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~-~~g~~vAvK~~~~~~----------~~~~~~~~~E~~iL~~L-~HpnIv~l~g~~~~~~~~~l 686 (935)
...+.|+.|.+..++. --|+.+++|++.... ....++|.+|+++|+++ +|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 4567777777766543 358999999986531 12335799999999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccc
Q 002336 687 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 766 (935)
Q Consensus 687 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~ 766 (935)
||||++|++|.++|.. +.+++.. +|+.||+.||+|||+ +|||||||||+|||+++++.+||+|||+++...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999984 4566654 588999999999998 999999999999999999999999999998765
Q ss_pred ccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002336 767 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 815 (935)
Q Consensus 767 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~P 815 (935)
..... .....||++|+|||++.+ .+..++|+|++|+++++|.++..+
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 43322 233569999999999876 467789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=6.3e-24 Score=252.05 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=146.3
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcch--------hhhHHHHHHHHHHHhcCCCcccccceeeeccceEEEEEE
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~iL~~L~HpnIv~l~g~~~~~~~~~lV~E 689 (935)
.+.||+|+||.||+|... ++.+++|+...... ...+++.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999655 78899998643211 123568999999999999999977777777778899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeeccccccccccc
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 769 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~ 769 (935)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999973 56899999999999998 89999999999999998 99999999999875532
Q ss_pred cce------eecccCCccccCCCCCCC--CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002336 770 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 817 (935)
Q Consensus 770 ~~~------~~~~~gt~~y~APE~l~~--~~~s~ksDVwS~Gvil~eLltG~~Pf~ 817 (935)
... .....||+.|+|||++.. ..|+...|+|+..+-..+.+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 234568999999999876 567888999999999988888777664
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=5e-21 Score=208.42 Aligned_cols=140 Identities=15% Similarity=0.116 Sum_probs=114.8
Q ss_pred hcccccccccEEEEEEEECCCcEEEEEEccCcch------------------hhhHHHHHHHHHHHhcCCCcccccceee
Q 002336 617 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 678 (935)
Q Consensus 617 ~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~------------------~~~~~~~~E~~iL~~L~HpnIv~l~g~~ 678 (935)
+.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|+++|++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 3588999999999999997799999999864321 13456899999999999 5 7777766
Q ss_pred eccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEee
Q 002336 679 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 758 (935)
Q Consensus 679 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~D 758 (935)
.. +..++||||+++++|.+ +.. .....++.|+++||.|||+ .+|+||||||+|||++ ++.+||+|
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred ec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 44 55699999999999998 531 1245799999999999998 9999999999999999 99999999
Q ss_pred ccccccccccccceeecccCCccccCCCCC
Q 002336 759 FGLSRQAEEDLTHISSVARGTVGYLDPEYY 788 (935)
Q Consensus 759 FGla~~~~~~~~~~~~~~~gt~~y~APE~l 788 (935)
||+++. +..+.|||++
T Consensus 236 FG~a~~--------------~~~~~a~e~l 251 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREIL 251 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHH
Confidence 999863 3346777765
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=1.9e-17 Score=177.82 Aligned_cols=137 Identities=23% Similarity=0.228 Sum_probs=105.0
Q ss_pred hhcccccccccEEEEEEEE-CCCcE--EEEEEccCcchh------------------------hhHHHHHHHHHHHhcCC
Q 002336 616 NFCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHH 668 (935)
Q Consensus 616 ~~~~~LG~G~fG~Vy~~~~-~~g~~--vAvK~~~~~~~~------------------------~~~~~~~E~~iL~~L~H 668 (935)
.+.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+.+|.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999998 67999 999987543111 11368889999999988
Q ss_pred CcccccceeeeccceEEEEEEecCC-C----CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhh-hcCCCceEecCCC
Q 002336 669 RNLVPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRDVK 742 (935)
Q Consensus 669 pnIv~l~g~~~~~~~~~lV~E~~~~-g----sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH-s~~~~~ivH~DLk 742 (935)
+++....-+.. ...++||||+.+ | +|.+.... .++..+..++.|++++|.||| + .+|+|||||
T Consensus 130 ~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrDlk 198 (258)
T 1zth_A 130 AGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHADLS 198 (258)
T ss_dssp TTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSCS
T ss_pred CCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCCC
Confidence 86532222211 356899999942 4 77776532 124467889999999999999 7 899999999
Q ss_pred CCCccccCCCcEEEeeccccccc
Q 002336 743 SSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 743 p~NILld~~~~vkL~DFGla~~~ 765 (935)
|+|||+++ .++|+|||++...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.64 E-value=2.4e-16 Score=174.02 Aligned_cols=150 Identities=27% Similarity=0.494 Sum_probs=127.7
Q ss_pred CchhhHHHHHHHHhhcCCC-CCCCCCC-CCCCCCCCceEEEeCCC-CCcEEEEEccCCCCcc--cCCccccCcccccccc
Q 002336 369 TEWQDVMVLEALRSISDES-ERTNDRG-DPCVPVPWEWVTCSTTT-PPRITKIALSGKNLKG--EIPPELKNMEALTELW 443 (935)
Q Consensus 369 t~~~d~~~l~~l~~~~~~~-~~~~w~~-dpC~~~~w~~v~c~~~~-~~~l~~L~Ls~n~l~g--~ip~~i~~L~~L~~L~ 443 (935)
+.++|..||.++|+.+.++ ...+|.. .+||.+.|.||.|+... ..+|+.|+|++|+++| .+|+.|++|++|++|+
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 5678999999999988643 3456753 34444469999997642 3689999999999999 9999999999999999
Q ss_pred ccc-ccCCCCCC-CccccccccccccccccccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCC
Q 002336 444 LDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 444 Ls~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
|++ |.+.+.+| .++++++|++|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..+.. ....+.+++|..
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 995 99999998 6999999999999999999999999999999999999999999999988765 445566667653
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=1.6e-15 Score=188.32 Aligned_cols=158 Identities=20% Similarity=0.241 Sum_probs=127.6
Q ss_pred hhhhhhceeeccc---ccCchhhHHHHHHHHhhcCCCCCCCCCC-------CCCCCCCC------------ceEEEeCCC
Q 002336 354 LNAIEISKYQKIA---AKTEWQDVMVLEALRSISDESERTNDRG-------DPCVPVPW------------EWVTCSTTT 411 (935)
Q Consensus 354 ina~e~~~~~~~~---~~t~~~d~~~l~~l~~~~~~~~~~~w~~-------dpC~~~~w------------~~v~c~~~~ 411 (935)
-|+++-.+.+++. ..+..+|..||.++|+.+... +|+. +|| +|.| .||.|++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~-~C~W~~~~~~~~w~~~~GV~C~~~- 322 (876)
T 4ecn_A 248 DNKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIH-SLNWNFNKELDMWGDQPGVDLDNN- 322 (876)
T ss_dssp TTSEEEEEEEEECCCCCCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCC-CCSCCCSSCGGGTTCCTTEEECTT-
T ss_pred ecccccccccceeccccccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCC-ccccccccccccccCcCceEecCC-
Confidence 3443444555543 245567999999999998643 6643 342 2589 99999873
Q ss_pred CCcEEEEEccCCCCcccCCccccCccccccccc-ccccCCCC--------------------------------------
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWL-DGNFLTGP-------------------------------------- 452 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~L-s~N~l~g~-------------------------------------- 452 (935)
.+|+.|+|++|+|.|.+|++|++|++|+.|+| ++|.++|.
T Consensus 323 -~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s 401 (876)
T 4ecn_A 323 -GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLS 401 (876)
T ss_dssp -SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred -CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhh
Confidence 69999999999999999999999999999999 88866554
Q ss_pred --------------------------------------CC-CccccccccccccccccccC-----------------CC
Q 002336 453 --------------------------------------LP-DMSRLIDLRIVHLENNELTG-----------------SL 476 (935)
Q Consensus 453 --------------------------------------~p-~~~~l~~L~~L~L~~N~l~g-----------------~i 476 (935)
+| .+++|++|+.|+|++|+|+| .+
T Consensus 402 ~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 402 DLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 56 68899999999999999998 49
Q ss_pred CCccC--ccccccccccccccCCCCCCccccC--CceeeeecCCC
Q 002336 477 PSYMG--SLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 477 P~~l~--~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
|++++ +|++|+.|+|++|++.|.+|..+.. ....+.+++|.
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 99988 9999999999999999999988765 45566677776
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.54 E-value=4.6e-15 Score=179.83 Aligned_cols=145 Identities=18% Similarity=0.248 Sum_probs=121.1
Q ss_pred cCchhhHHHHHHHHhhcCCCCCC----------CCCCC-CCCCCCC---ceEEEeCCCCCcEEEEEccCCCCcccCCccc
Q 002336 368 KTEWQDVMVLEALRSISDESERT----------NDRGD-PCVPVPW---EWVTCSTTTPPRITKIALSGKNLKGEIPPEL 433 (935)
Q Consensus 368 ~t~~~d~~~l~~l~~~~~~~~~~----------~w~~d-pC~~~~w---~~v~c~~~~~~~l~~L~Ls~n~l~g~ip~~i 433 (935)
.....|..||.+++.......+. +|+.+ +| |.| .||.|+.. .+|+.|+|++|+++|.+|++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~--c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l 101 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKEL--DMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAI 101 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCG--GGTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCc--ccccCCCCeEEcCC--CCEEEEEecCcccCCcCChHH
Confidence 34457999999999887543322 67643 23 269 99999765 699999999999999999999
Q ss_pred cCccccccccccccc-----------------------------------------------------------------
Q 002336 434 KNMEALTELWLDGNF----------------------------------------------------------------- 448 (935)
Q Consensus 434 ~~L~~L~~L~Ls~N~----------------------------------------------------------------- 448 (935)
++|++|+.|+|++|.
T Consensus 102 ~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 181 (636)
T 4eco_A 102 GQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181 (636)
T ss_dssp GGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCC
T ss_pred hcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccccc
Confidence 999999999999994
Q ss_pred -------------CCCCCC-CccccccccccccccccccCC-----------------CCCccC--cccccccccccccc
Q 002336 449 -------------LTGPLP-DMSRLIDLRIVHLENNELTGS-----------------LPSYMG--SLPNLQELHIENNS 495 (935)
Q Consensus 449 -------------l~g~~p-~~~~l~~L~~L~L~~N~l~g~-----------------iP~~l~--~l~~L~~L~l~~N~ 495 (935)
|+| +| .++++++|++|+|++|+|+|. +|.+++ +|++|+.|+|++|+
T Consensus 182 ~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~ 260 (636)
T 4eco_A 182 TLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260 (636)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT
T ss_pred chhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc
Confidence 445 55 689999999999999999986 999999 99999999999999
Q ss_pred CCCCCCccccC--CceeeeecCCC
Q 002336 496 FVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 496 l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+.|.+|..+.. ....+.+++|.
T Consensus 261 l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 261 NLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TCSSCCTTTTTCSSCCEEECTTCT
T ss_pred CCccChHHHhcCCCCCEEECcCCC
Confidence 99999998875 44556667775
No 258
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.51 E-value=6.8e-15 Score=164.96 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=97.6
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchh--------------hhH--------HHHHHHHHHHhcCCCccc
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--------------RTQ--------QFVTEVALLSRIHHRNLV 672 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~--------------~~~--------~~~~E~~iL~~L~HpnIv 672 (935)
|.+.+.||+|++|.||+|...+|+.||||+++..... ... ...+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4567889999999999999999999999987532110 001 123466666666544432
Q ss_pred ccceeeeccceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCC
Q 002336 673 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 752 (935)
Q Consensus 673 ~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~ 752 (935)
...-+.. ...++||||++|++|.+.... .....++.|++.+|.+||+ .+||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 2211111 223799999999888765431 1235688999999999998 8999999999999998776
Q ss_pred ----------cEEEeecccccc
Q 002336 753 ----------RAKVSDFGLSRQ 764 (935)
Q Consensus 753 ----------~vkL~DFGla~~ 764 (935)
.+.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999996654
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.46 E-value=1.6e-14 Score=178.98 Aligned_cols=111 Identities=32% Similarity=0.436 Sum_probs=102.2
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.+.++.|||++|+++|.+|.+|++|++|+.|+|++|+|+|.+| ++++|++|+.|||++|+|+|.+|.+++++++|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 4578999999999999999999999999999999999999999 699999999999999999999999999999999999
Q ss_pred cccccCCCCCCccc-cCCceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l-~~~~~~~~~~~n~~~~~~ 522 (935)
|++|+|+|.||..- +.......+.|||.+|+.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999853 334455678999999974
No 260
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.40 E-value=2.9e-13 Score=138.46 Aligned_cols=120 Identities=23% Similarity=0.307 Sum_probs=103.6
Q ss_pred CCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Ccccccccccccccccc
Q 002336 401 PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE 471 (935)
Q Consensus 401 ~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~ 471 (935)
.|..+.|+.. .+++++.|+|++|+|+ .+|..|.++++|+.|+|++|.|++..+ .|.+|++|+.|+|++|+
T Consensus 11 ~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 11 LDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4566666542 2457999999999998 899999999999999999999999988 59999999999999999
Q ss_pred ccCCCCCccCccccccccccccccCCCCCCccccC---CceeeeecCCCCCccc
Q 002336 472 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 472 l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~ 522 (935)
|++..|..|..+++|+.|+|++|+|+ .+|...+. ....+.+.+|++.|.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 99877888999999999999999999 77775443 4567788999998864
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.38 E-value=3.5e-13 Score=137.65 Aligned_cols=123 Identities=19% Similarity=0.215 Sum_probs=105.5
Q ss_pred CCCceEEEeCC--------CCCcEEEEEccCCCCcccCCc-cccCcccccccccccccCCCCCC-Ccccccccccccccc
Q 002336 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 469 (935)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~-~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~ 469 (935)
+.|..+.|+.. .+.+++.|+|++|++++..+. .|+++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45777777643 234899999999999966654 48999999999999999999988 699999999999999
Q ss_pred ccccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCCCccc
Q 002336 470 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 470 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~~ 522 (935)
|+|++..|..+.++++|+.|+|++|+|++.+|..+.. ....+.+.+|+..|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999888888999999999999999999888877754 4567788999998753
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.35 E-value=5.5e-13 Score=165.21 Aligned_cols=131 Identities=19% Similarity=0.324 Sum_probs=82.7
Q ss_pred cCchhhHHHHHHHHhhcCCC-CCCCCC-CCCCCCCCCceEEEeCCCCCcEEEEEccCCCCccc---CCccccCccccccc
Q 002336 368 KTEWQDVMVLEALRSISDES-ERTNDR-GDPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGE---IPPELKNMEALTEL 442 (935)
Q Consensus 368 ~t~~~d~~~l~~l~~~~~~~-~~~~w~-~dpC~~~~w~~v~c~~~~~~~l~~L~Ls~n~l~g~---ip~~i~~L~~L~~L 442 (935)
....+|..||.++|+.+.++ ...+|. +..|| .|.||+|+ ..+|+.|+|+++++.|. +|+.|++|+.|+.+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C--~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC--TFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG--GSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc--CCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 44678999999999988643 456785 34444 79999998 36999999999999998 77655555444444
Q ss_pred ccccccCCCCCCCccccccccccccccccccCCCCC--ccCccccccccccccccCCCCCCcc
Q 002336 443 WLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHIENNSFVGEIPPA 503 (935)
Q Consensus 443 ~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~L~l~~N~l~g~iP~~ 503 (935)
+++.|.+...++.++++++|++|+|++|+++|.+|. .+++|++|++|+|++|.++|.+|..
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 145 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVS 145 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHH
Confidence 444444433223455555555555555555555554 4555555555555555555554443
No 263
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.32 E-value=2.2e-12 Score=129.56 Aligned_cols=125 Identities=20% Similarity=0.314 Sum_probs=104.8
Q ss_pred CCCCCCCCceEEEeCCC--------CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-cccccccccc
Q 002336 395 DPCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 465 (935)
Q Consensus 395 dpC~~~~w~~v~c~~~~--------~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 465 (935)
+.|. |.|.++.|.... +++++.|+|++|++++..+..|.++++|++|+|++|+|++.++. +.++++|+.|
T Consensus 3 ~~C~-C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRCS-CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTCE-EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCE-eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 3453 478888887532 45899999999999976666789999999999999999988885 7999999999
Q ss_pred ccccccccCCCCCccCccccccccccccccCCCCCCccccC---CceeeeecCCCCCcc
Q 002336 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHK 521 (935)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~ 521 (935)
+|++|++++..+..++.+++|+.|+|++|+|+ .+|...+. ....+.+.+|+..|.
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeecc
Confidence 99999999766677899999999999999999 67776533 456678899998874
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.30 E-value=1.9e-12 Score=135.20 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=97.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 45899999999999977777999999999999999999998884 89999999999999999988899999999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~~ 522 (935)
|++|+|++..|..+.. ....+.+.+|+..|.+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9999999766776654 4566788999988853
No 265
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.30 E-value=2.6e-12 Score=134.94 Aligned_cols=122 Identities=22% Similarity=0.308 Sum_probs=95.2
Q ss_pred CCCCCCCCCCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccc
Q 002336 392 DRGDPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDL 462 (935)
Q Consensus 392 w~~dpC~~~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L 462 (935)
|..+.| .|.++.|+.. .+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|
T Consensus 14 ~~~~~C---s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 90 (229)
T 3e6j_A 14 PSQCSC---SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90 (229)
T ss_dssp CTTCEE---ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCEE---eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc
Confidence 334455 5899999753 245789999999999988888899999999999999999877764 6889999
Q ss_pred cccccccccccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCC
Q 002336 463 RIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 463 ~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .||..+.. ....+.+.+|.
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 99999999998655666788888888888888888 88876643 33444555554
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.29 E-value=5.7e-13 Score=147.94 Aligned_cols=132 Identities=22% Similarity=0.242 Sum_probs=110.8
Q ss_pred cCchhhHHHHHHHHhhcCC-C--CCCCCC------CCCCCCCCCceEEEeC-------CCCCcEEEEEccCCCCcccCCc
Q 002336 368 KTEWQDVMVLEALRSISDE-S--ERTNDR------GDPCVPVPWEWVTCST-------TTPPRITKIALSGKNLKGEIPP 431 (935)
Q Consensus 368 ~t~~~d~~~l~~l~~~~~~-~--~~~~w~------~dpC~~~~w~~v~c~~-------~~~~~l~~L~Ls~n~l~g~ip~ 431 (935)
....+|..+|.+||+.+.. . ....|. ++.| .|.|+.|.. ....+|+.|+|++|+++ .+|+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~---~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE---TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC---CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc---ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 4556788999999986632 1 123452 2334 699998852 23468999999999999 9999
Q ss_pred cccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccccccccCCCCCCcccc
Q 002336 432 ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL 505 (935)
Q Consensus 432 ~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~ 505 (935)
.+++|++|++|+|++|.|+ .+| .++++++|++|+|++|+++ .+|..++++++|+.|+|++|++.|.+|..+.
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~ 171 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLA 171 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSE
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHh
Confidence 9999999999999999999 555 7999999999999999999 9999999999999999999999999999874
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.27 E-value=4.6e-12 Score=132.23 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=91.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++.++. |.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 35788999999999988888999999999999999999987775 68899999999999999988888899999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~~ 522 (935)
|++|+|++..|..+.. ....+.+.+|++.|.+
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999998443333433 4556788999988853
No 268
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.21 E-value=1.2e-11 Score=123.67 Aligned_cols=103 Identities=27% Similarity=0.333 Sum_probs=82.3
Q ss_pred EEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccccccc
Q 002336 416 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (935)
Q Consensus 416 ~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 494 (935)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..|..+..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57889999988 6887764 788999999999999887 5888999999999999999655556788999999999999
Q ss_pred cCCCCCCcc-ccC--CceeeeecCCCCCccc
Q 002336 495 SFVGEIPPA-LLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 495 ~l~g~iP~~-l~~--~~~~~~~~~n~~~~~~ 522 (935)
+|+ .+|.. +.. ....+.+.+|+..|..
T Consensus 89 ~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 998 56554 332 4556778889888754
No 269
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.21 E-value=9.2e-12 Score=124.48 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=88.8
Q ss_pred CCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccc
Q 002336 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 470 (935)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N 470 (935)
+.|..+.|+.. .+.+++.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35677777543 245799999999999988899999999999999999999998885 689999999999999
Q ss_pred cccCCCCCccCccccccccccccccCCCCCC
Q 002336 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIP 501 (935)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP 501 (935)
+|++..|..+..+++|+.|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9996666679999999999999999995544
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.21 E-value=1.7e-11 Score=128.70 Aligned_cols=109 Identities=23% Similarity=0.227 Sum_probs=94.8
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++.++. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 45899999999999854456679999999999999999998885 789999999999999999 9999999999999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~ 522 (935)
|++|+|+ .+|...+. ....+.+.+|+..|.+
T Consensus 142 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 142 LDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 66654333 4567788999998864
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.21 E-value=1.9e-12 Score=142.79 Aligned_cols=108 Identities=26% Similarity=0.309 Sum_probs=98.8
Q ss_pred EEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccccccc
Q 002336 415 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (935)
Q Consensus 415 l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 494 (935)
|+.|+|++|++++.+|..|.++++|+.|+|++|.+++.+|.+..+++|+.|+|++|+++|.+|..++++++|+.|+|++|
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccc-cCCceeeeecCCCCCccc
Q 002336 495 SFVGEIPPAL-LTGKVIFKYDNNPKLHKE 522 (935)
Q Consensus 495 ~l~g~iP~~l-~~~~~~~~~~~n~~~~~~ 522 (935)
+|+|.+|..- ......+.+.+|+++|+.
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred cccccCCCCccccccChHHhcCCCCccCC
Confidence 9999999862 123456678999999974
No 272
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.20 E-value=1.7e-11 Score=123.02 Aligned_cols=103 Identities=22% Similarity=0.338 Sum_probs=86.2
Q ss_pred EEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccccccc
Q 002336 416 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (935)
Q Consensus 416 ~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 494 (935)
+.|++++|+|. .+|..+. ++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..+..+.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999996 8898775 899999999999999988 6899999999999999999644455789999999999999
Q ss_pred cCCCCCCcc-ccC--CceeeeecCCCCCccc
Q 002336 495 SFVGEIPPA-LLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 495 ~l~g~iP~~-l~~--~~~~~~~~~n~~~~~~ 522 (935)
+|+ .+|.. +.. ....+.+.+|+..|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 999 67765 332 4566788999988753
No 273
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.18 E-value=3.1e-11 Score=124.46 Aligned_cols=121 Identities=22% Similarity=0.337 Sum_probs=94.6
Q ss_pred CCCCCCCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-cccccccccc
Q 002336 395 DPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 465 (935)
Q Consensus 395 dpC~~~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 465 (935)
+.|. |.|.++.|+.. .+++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +.++++|++|
T Consensus 3 ~~C~-C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 3 SRCS-CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TTCE-EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCE-ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 3453 47899998753 245799999999999966666788999999999999999988774 6889999999
Q ss_pred ccccccccCCCCCccCccccccccccccccCCCCCCccc-cC--CceeeeecCCC
Q 002336 466 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL-LT--GKVIFKYDNNP 517 (935)
Q Consensus 466 ~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l-~~--~~~~~~~~~n~ 517 (935)
+|++|++++..+..++++++|+.|+|++|+++ .+|... .. ....+.+.+|.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~ 135 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCc
Confidence 99999999655566889999999999999998 555543 32 34455666664
No 274
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.17 E-value=2.3e-11 Score=126.85 Aligned_cols=119 Identities=22% Similarity=0.209 Sum_probs=98.0
Q ss_pred CCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccccc
Q 002336 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (935)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (935)
|.|..+.|... .+++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..| .|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46777887643 23479999999999997777799999999999999999999987 6999999999999999
Q ss_pred cccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCC
Q 002336 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
+|+...+..+..+++|+.|+|++|+|++..|..+.. ....+.+.+|..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 999444445789999999999999999666665543 445666777754
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.16 E-value=1.3e-11 Score=125.91 Aligned_cols=91 Identities=22% Similarity=0.341 Sum_probs=86.3
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++.+|..++.+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999998899999999999999999999999985 89999999999999999999999999999999999
Q ss_pred cccccCCCCCCc
Q 002336 491 IENNSFVGEIPP 502 (935)
Q Consensus 491 l~~N~l~g~iP~ 502 (935)
|++|.+++..|.
T Consensus 133 L~~N~l~c~c~l 144 (192)
T 1w8a_A 133 LASNPFNCNCHL 144 (192)
T ss_dssp CTTCCBCCSGGG
T ss_pred eCCCCccCcCcc
Confidence 999999988774
No 276
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.15 E-value=4.5e-11 Score=130.22 Aligned_cols=110 Identities=27% Similarity=0.340 Sum_probs=96.1
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 46899999999999977778899999999999999999998884 78999999999999999944444578899999999
Q ss_pred cccccCCCCCCccccCC--ceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLTG--KVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~~--~~~~~~~~n~~~~~~ 522 (935)
|++|+|+ .||..++.. ...+.+.+||+.|.+
T Consensus 179 L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9999999 999988763 456778999999863
No 277
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.15 E-value=1.7e-11 Score=136.86 Aligned_cols=102 Identities=21% Similarity=0.246 Sum_probs=87.5
Q ss_pred EEccCC-CCcccCCccccCccccccccccc-ccCCCCCC-CccccccccccccccccccCCCCCccCccccccccccccc
Q 002336 418 IALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 494 (935)
Q Consensus 418 L~Ls~n-~l~g~ip~~i~~L~~L~~L~Ls~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 494 (935)
++++++ +|+ .||. |..+++|+.|+|++ |+|++.+| .|.+|++|+.|+|++|+|+|..|..|++|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 467777 788 6888 99999999999996 99999887 6899999999999999999888889999999999999999
Q ss_pred cCCCCCCccccCC--ceeeeecCCCCCccc
Q 002336 495 SFVGEIPPALLTG--KVIFKYDNNPKLHKE 522 (935)
Q Consensus 495 ~l~g~iP~~l~~~--~~~~~~~~n~~~~~~ 522 (935)
+|+ .+|..++.. ...+.+.+|+..|.+
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 999 677766543 556778899988863
No 278
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.14 E-value=6.6e-11 Score=125.83 Aligned_cols=110 Identities=20% Similarity=0.214 Sum_probs=94.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 45899999999999977777889999999999999999988885 78999999999999999966666899999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCcc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~ 521 (935)
|++|+|++..|..+.. ....+.+.+|+..|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999444444433 456778899998874
No 279
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.13 E-value=3.6e-11 Score=125.42 Aligned_cols=123 Identities=15% Similarity=0.193 Sum_probs=100.7
Q ss_pred CCCCCCCCceEEEeCCC--------CCcEEEEEccCCCCcccCCc-cccCcccccccccccccCCCCCC-Cccccccccc
Q 002336 395 DPCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRI 464 (935)
Q Consensus 395 dpC~~~~w~~v~c~~~~--------~~~l~~L~Ls~n~l~g~ip~-~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~ 464 (935)
..|. |.|..+.|+... +..++.|+|++|+|++..|. .|.++++|+.|+|++|+|++..+ .|.++++|+.
T Consensus 7 ~~C~-C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 7 EKCR-CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp TTCE-EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCCE-ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 3443 467777776432 34678999999999977664 58999999999999999999988 7999999999
Q ss_pred cccccccccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCC
Q 002336 465 VHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 465 L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
|+|++|++++..|..+..+++|+.|+|++|+|++..|..+.. ....+.+.+|..
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 141 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC
Confidence 999999999877778999999999999999999766776654 445566677753
No 280
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.12 E-value=3.4e-10 Score=113.48 Aligned_cols=141 Identities=14% Similarity=0.187 Sum_probs=95.1
Q ss_pred eEEEecCCCCCccCCCCCeEEecCCccccCCceeeecCC------C-CCcccccccccccCCCCcceEEeeecCCceeEE
Q 002336 25 FISIDCGSTSNYTDPSTGLAWISDIGIMNNGKSVKVENP------S-GNWMQYRTRRDLPIDNKKYCYNLITKERRRYLV 97 (935)
Q Consensus 25 ~~~idcg~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~------~-~~~~~~~tlr~fp~~~~~~cy~l~~~~~~~ylv 97 (935)
-+.||||+.. .+| ..+.+|.+|..|...|........ . ...+.|.|-|.|| .+.+|.+|+.++++|+|
T Consensus 7 ~~~INcGg~~-~~d-~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~---~~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 7 IWAVNAGGES-HVD-VHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNE---DSFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEEETSSS-EEE-TTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCC---SCEEEEEECCSCEEEEE
T ss_pred EEEEECCCCC-ccC-CCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCC---CCeEEEEEeCCCeEEEE
Confidence 4679999765 455 579999999988644532211110 0 1134678999998 37899999999999999
Q ss_pred EEEeeecCCCCCCCCCeEEEEEcCcee-EEEEec---CCccceEEEEEEe-------------cCCCCcccceeccCCCC
Q 002336 98 RATFQYGSLGSEASYPKFQLYLDATLW-STVTVL---DASRVYAKEMIIR-------------APSDSIDVCICCAVTGS 160 (935)
Q Consensus 98 r~~~~yg~yd~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~-------------~~~~~~~vcl~~~~~~~ 160 (935)
|.-|.--.|.+ .....||++++|..- .-.++. .....+..+..+. .....+.|.|.....+.
T Consensus 82 rLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~ 160 (174)
T 2jwp_A 82 VLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN 160 (174)
T ss_dssp EEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCS
T ss_pred EEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCC
Confidence 99997766653 566799999999542 222221 1223444554443 24456777777544568
Q ss_pred ceeeeeeeeec
Q 002336 161 PFISTLELRPL 171 (935)
Q Consensus 161 pfis~le~~~l 171 (935)
|||++||+.+-
T Consensus 161 a~inaIEI~~~ 171 (174)
T 2jwp_A 161 PKVCALFIMKG 171 (174)
T ss_dssp SSEEEEEEESS
T ss_pred cEEEEEEEEeC
Confidence 99999999874
No 281
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.11 E-value=5.4e-11 Score=119.39 Aligned_cols=90 Identities=19% Similarity=0.272 Sum_probs=81.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
+.+|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 45799999999999988899999999999999999999998885 68999999999999999955555699999999999
Q ss_pred cccccCCCCCCc
Q 002336 491 IENNSFVGEIPP 502 (935)
Q Consensus 491 l~~N~l~g~iP~ 502 (935)
|++|.+. ..|.
T Consensus 112 L~~N~~~-c~~~ 122 (174)
T 2r9u_A 112 LYNNPWD-CECR 122 (174)
T ss_dssp CCSSCBC-TTBG
T ss_pred eCCCCcc-cccc
Confidence 9999998 4444
No 282
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.11 E-value=1.1e-10 Score=120.23 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=92.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +.++++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 35899999999999965556689999999999999999988875 78999999999999999976666789999999999
Q ss_pred cccccCCCCCCccc-cC--CceeeeecCCCCCcc
Q 002336 491 IENNSFVGEIPPAL-LT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 491 l~~N~l~g~iP~~l-~~--~~~~~~~~~n~~~~~ 521 (935)
|++|+++ .+|... .. ....+.+.+|+..|.
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecC
Confidence 9999999 566543 32 456678899988764
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.11 E-value=1e-10 Score=125.89 Aligned_cols=111 Identities=17% Similarity=0.154 Sum_probs=95.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|.++++|+.|+|++|++++.++. +.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 46899999999999977777799999999999999999998885 68999999999999999977777789999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~~ 522 (935)
|++|++++..|..+.. ....+.+.+|+..|..
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 9999999655544433 5567788999988753
No 284
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.10 E-value=4e-11 Score=119.17 Aligned_cols=104 Identities=22% Similarity=0.275 Sum_probs=86.8
Q ss_pred CCcEEEEEccCCCCc-ccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++.+|..+.++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 457999999999998 88999899999999999999999988 8889999999999999999987888888899999999
Q ss_pred cccccCCCCCC--ccccC--CceeeeecCCC
Q 002336 491 IENNSFVGEIP--PALLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP--~~l~~--~~~~~~~~~n~ 517 (935)
|++|+++ .+| ..+.. ....+.+.+|+
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCc
Confidence 9999998 555 44433 33445556664
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.10 E-value=4.8e-11 Score=132.35 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=84.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|+++ .+|..++++++|+.|+|++|.+++.++.+.++++|+.|+|++|++.+.+|..++++++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 357888888888888 7888888888888888888888877667888888888888888888888888888888888888
Q ss_pred ccccCCCCCCccccC--CceeeeecCCCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~~~ 519 (935)
++|++.+.+|..+.. ....+.+.+|+..
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 888888888877654 3445666666544
No 286
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.08 E-value=3.2e-11 Score=117.27 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=82.1
Q ss_pred CcEEEEEccCCCCc-ccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. +.++++++|+.|+|++|++++.+|..++.+++|+.|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 57888899999888 88888888889999999999988887 77888888999999999988778888888888999999
Q ss_pred ccccCCCC-CCccccC--CceeeeecCCC
Q 002336 492 ENNSFVGE-IPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 492 ~~N~l~g~-iP~~l~~--~~~~~~~~~n~ 517 (935)
++|++++. .|..+.. ....+.+.+|+
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCG
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCc
Confidence 99988841 2244443 34455566664
No 287
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.08 E-value=7.2e-11 Score=141.98 Aligned_cols=113 Identities=16% Similarity=0.167 Sum_probs=99.4
Q ss_pred CCCcEEEEEccCCCCc-ccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccc
Q 002336 411 TPPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 488 (935)
Q Consensus 411 ~~~~l~~L~Ls~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~ 488 (935)
..+.++.|+|++|++. +.+|..|..|++|+.|+|++|+|++.+| .|.+|++|+.|+|++|+|++..|..++++++|+.
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 3568999999999854 4578889999999999999999999988 6899999999999999999888888999999999
Q ss_pred cccccccCCCCCCccccC---CceeeeecCCCCCcccc
Q 002336 489 LHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 489 L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~~ 523 (935)
|+|++|+|++..|..+.. ....+.+++||+.|.+.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999887877653 45668899999999754
No 288
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.06 E-value=2.8e-10 Score=121.60 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=109.8
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeeccceEEEEEEecCC
Q 002336 615 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 615 ~~~~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
+.+...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 344567888888999999865 7899999986532233456899999999995 67788899999888889999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc------------------------------------------
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------ 731 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~------------------------------------------ 731 (935)
.+|.+.+.. ......++.+++++|+.||+.
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999876421 112347889999999999971
Q ss_pred --------------CCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 732 --------------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 732 --------------~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
....++|||+++.||+++++..+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01459999999999999876666799998764
No 289
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.05 E-value=2.4e-10 Score=122.81 Aligned_cols=110 Identities=22% Similarity=0.282 Sum_probs=96.1
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|.++++|+.|+|++|.|++.++. +..+++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 108 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 35899999999999987778899999999999999999998875 89999999999999999976666799999999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~ 522 (935)
|++|+++ .+|...+. ....+.+.+||+.|.+
T Consensus 188 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 188 LDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCC
Confidence 9999999 67765433 4567788999998864
No 290
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.05 E-value=2e-10 Score=122.03 Aligned_cols=105 Identities=22% Similarity=0.281 Sum_probs=83.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
++.++.|+|++|++++..+..|.++++|++|+|++|.|++.+| .+.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 34 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 34 PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 4568889999999988777788999999999999999998887 478889999999999999866667788889999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCC
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~ 517 (935)
|++|+|+ .+|...+. ....+.+++|.
T Consensus 114 L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCcCC-CcChhHhccCCcccEEECcCCc
Confidence 9999988 56654432 34455556664
No 291
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.05 E-value=1.5e-10 Score=124.38 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=80.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
++.++.|+|++|++++..+..|.++++|++|+|++|.++..++. +.++++|++|+|++|++++..+..+.++++|+.|+
T Consensus 36 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 36 PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 34688899999998866666888999999999999999877774 57889999999999998865556678889999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCC
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
|++|++++..|..+.. ....+.+++|.
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 9999988433333322 34455556664
No 292
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.05 E-value=9.5e-11 Score=138.96 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=98.2
Q ss_pred CCCceEEEeCCC----------CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccc
Q 002336 400 VPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLE 468 (935)
Q Consensus 400 ~~w~~v~c~~~~----------~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~ 468 (935)
|+|.++ |+|.. +++|+.|+|++|++++..|..|.++++|++|+|++|++++.+| .|+++++|++|+|+
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 479998 98752 3579999999999998888999999999999999999999887 68999999999999
Q ss_pred cccccCCCCCccCccccccccccccccCCC-CCCccccC--CceeeeecCCC
Q 002336 469 NNELTGSLPSYMGSLPNLQELHIENNSFVG-EIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 469 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~iP~~l~~--~~~~~~~~~n~ 517 (935)
+|++++..|..++++++|++|+|++|++++ .+|..+.. ....+.+.+|.
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 999997777779999999999999999985 45655543 34455556664
No 293
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.02 E-value=1.3e-10 Score=139.63 Aligned_cols=105 Identities=15% Similarity=0.064 Sum_probs=88.2
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
|..++.|||++|+|++..|..|.+|++|++|+|++|+|++.+| .|.+|++|++|+|++|+|++..|..|.+|++|+.|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4579999999999997667789999999999999999999888 589999999999999999965556789999999999
Q ss_pred cccccCCCCCCcc-ccC--CceeeeecCCC
Q 002336 491 IENNSFVGEIPPA-LLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~-l~~--~~~~~~~~~n~ 517 (935)
|++|+|+ .+|.. +.. ....+.+++|.
T Consensus 131 Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 131 AVETNLA-SLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp CTTSCCC-CSTTCCCTTCTTCCEEECCSSC
T ss_pred CCCCcCC-CCChhhhhcCcccCeeccccCc
Confidence 9999999 56654 332 34455566664
No 294
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.01 E-value=2.1e-10 Score=132.63 Aligned_cols=111 Identities=19% Similarity=0.228 Sum_probs=96.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..|..|.++++|+.|+|++|.+++.+| .+.++++|+.|+|++|++++..|..++++++|+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 4689999999999998888899999999999999999988877 578999999999999999988899999999999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCCCCcccc
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~~ 523 (935)
|++|+++ .+|...+. ....+.+.+|+..|..+
T Consensus 378 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999 56665432 45677889999888644
No 295
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.00 E-value=2.4e-10 Score=127.37 Aligned_cols=103 Identities=19% Similarity=0.213 Sum_probs=85.1
Q ss_pred CCCCCCCceEEEeCC----------CCCcEEEEEccC-CCCcccCCccccCcccccccccccccCCCCCC-Ccccccccc
Q 002336 396 PCVPVPWEWVTCSTT----------TPPRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLR 463 (935)
Q Consensus 396 pC~~~~w~~v~c~~~----------~~~~l~~L~Ls~-n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~ 463 (935)
.|..|.|..+.|+.. ...+|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++.+| .|.+|++|+
T Consensus 4 ~c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp SSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred cCccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 352346778888654 124699999996 99998777899999999999999999999999 589999999
Q ss_pred ccccccccccCCCCCccCccccccccccccccCCCC
Q 002336 464 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGE 499 (935)
Q Consensus 464 ~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 499 (935)
.|+|++|+|++..|..+..++ |+.|+|.+|.|...
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred EEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999954444555555 99999999999844
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.00 E-value=2.4e-10 Score=125.07 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=98.1
Q ss_pred CCcEEEEEccCCCCcc-cCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g-~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
.++|+.|+|++|.+++ .+|..+.++++|+.|+|++|++++.+| .+.++++|+.|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 4689999999999997 688999999999999999999999877 68999999999999999997666689999999999
Q ss_pred ccccccCCCCCCccccC---CceeeeecCCCCCccc
Q 002336 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~ 522 (935)
+|++|++++.+|..+.. ....+.+.+|+..|.+
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99999999888877664 3456788999988753
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.99 E-value=2.3e-10 Score=123.91 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=94.8
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|+++++|+.|+|++|++++.++ .+.++++|+.|+|++|++++..|..++++++|+.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 4589999999999996666679999999999999999998887 489999999999999999988899999999999999
Q ss_pred cccccCCCCCCcc-ccC--CceeeeecCCCCCccc
Q 002336 491 IENNSFVGEIPPA-LLT--GKVIFKYDNNPKLHKE 522 (935)
Q Consensus 491 l~~N~l~g~iP~~-l~~--~~~~~~~~~n~~~~~~ 522 (935)
|++|++++ +|.. +.. ....+.+.+|+..|.+
T Consensus 208 l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 208 LFANNLSA-LPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CCSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCCc-CCHHHcccCcccCEEeccCCCccCCC
Confidence 99999995 5543 433 4566788999988753
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.98 E-value=1.7e-10 Score=133.44 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=91.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC--CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
+++|+.|+|++|++++..|..|++|++|++|+|++|.+.+.++ .|.++++|++|+|++|++++..|..++++++|+.|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 3579999999999998889999999999999999999998765 58999999999999999998889999999999999
Q ss_pred ccccccCCCCCCcc--ccC--CceeeeecCCC
Q 002336 490 HIENNSFVGEIPPA--LLT--GKVIFKYDNNP 517 (935)
Q Consensus 490 ~l~~N~l~g~iP~~--l~~--~~~~~~~~~n~ 517 (935)
+|++|++++.+|.. +.. ....+.+.+|.
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~ 140 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNN 140 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSB
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCc
Confidence 99999999766654 332 34455666664
No 299
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.97 E-value=3.5e-10 Score=127.10 Aligned_cols=117 Identities=21% Similarity=0.165 Sum_probs=88.3
Q ss_pred CCceEEEeCC--------CCCcEEEEEccCCCCcccCCcccc-CcccccccccccccCCCCCC-Cccccccccccccccc
Q 002336 401 PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (935)
Q Consensus 401 ~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (935)
.+..+.|+.. .+..++.|+|++|+|++..+..+. +|++|+.|+|++|+|++..| .|.++++|+.|+|++|
T Consensus 19 ~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 19 ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp ETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4566666542 134578899999999876666676 88999999999999998887 5888999999999999
Q ss_pred cccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCC
Q 002336 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+|++..+..|.++++|+.|+|++|+|++..|..+.. ....+.+++|.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCc
Confidence 988666667888889999999999888544554443 34455556664
No 300
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.97 E-value=3.7e-10 Score=113.16 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=80.2
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 35899999999999966666789999999999999999998885 78999999999999999955555578899999999
Q ss_pred cccccCCCCCC
Q 002336 491 IENNSFVGEIP 501 (935)
Q Consensus 491 l~~N~l~g~iP 501 (935)
|++|.+++..|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999998776
No 301
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.96 E-value=4.6e-10 Score=137.77 Aligned_cols=105 Identities=27% Similarity=0.360 Sum_probs=83.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
...|+.|+|++|++. .+|..+++|++|+.|+|++|.|+..++.|++|++|++|+|++|+|+ .||.+|++|++|+.|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 457888888888887 7888888888888888888888843336888888888888888888 88888888888888888
Q ss_pred ccccCCCCCCccccC--CceeeeecCCCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~~~ 519 (935)
++|.|+ .||.++.. ....+.+++|+..
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 888887 88887654 3455666777653
No 302
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.96 E-value=5.2e-10 Score=135.43 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=98.0
Q ss_pred CcEEEEEccCCCCcccCCcccc--CcccccccccccccCCCCCCCcccccccccccc------ccccccCCCCCccCccc
Q 002336 413 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSLP 484 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L------~~N~l~g~iP~~l~~l~ 484 (935)
++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.+..+.++++|+.|+| ++|++.+.+|..+++++
T Consensus 488 ~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 488 YLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 48999999999999 8999998 999999999999999994447999999999999 56889999999999999
Q ss_pred cccccccccccCCCCCCccccCCceeeeecCCCCCc
Q 002336 485 NLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 520 (935)
Q Consensus 485 ~L~~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~~~~ 520 (935)
+|+.|+|++|+| +.||..+......+.+++|+..|
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred CCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 999999999999 69999988888888999999876
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.96 E-value=3.6e-10 Score=126.41 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=95.4
Q ss_pred CCCceEEEeCCC----------CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccc
Q 002336 400 VPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLE 468 (935)
Q Consensus 400 ~~w~~v~c~~~~----------~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~ 468 (935)
|+|.++ |+|+. +++|+.|+|++|++++..+..|.++++|+.|+|++|++++..| .+.++++|++|+|+
T Consensus 30 C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 30 CDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp ECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 478887 88752 3479999999999997666689999999999999999999888 59999999999999
Q ss_pred cccccCCCCCccCccccccccccccccCCCCCCc-cccC---CceeeeecCCC
Q 002336 469 NNELTGSLPSYMGSLPNLQELHIENNSFVGEIPP-ALLT---GKVIFKYDNNP 517 (935)
Q Consensus 469 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~-~l~~---~~~~~~~~~n~ 517 (935)
+|++++..+..++++++|+.|+|++|+++ .+|. ..+. ....+.+.+|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 99999543444899999999999999999 7877 3322 34455666663
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.96 E-value=4.4e-10 Score=129.73 Aligned_cols=109 Identities=24% Similarity=0.333 Sum_probs=96.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..| .|.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 184 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred ccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 468999999999998 676 58999999999999999999988 699999999999999999988889999999999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCCCCcccc
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~~ 523 (935)
|++|+|+ .+|...+. ....+.+.+||+.|.+.
T Consensus 262 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 262 LAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999 66665543 45677889999998754
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.96 E-value=2.7e-10 Score=136.85 Aligned_cols=111 Identities=19% Similarity=0.138 Sum_probs=98.1
Q ss_pred CCcEEEEEccCCCCccc-CCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGE-IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~-ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
.++|+.|+|++|++++. +|..|+++++|+.|+|++|++++.+| .+.++++|+.|+|++|++++.+|..++++++|+.|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 46899999999999984 78889999999999999999999888 58999999999999999998889999999999999
Q ss_pred ccccccCCCCCCccccC---CceeeeecCCCCCcccc
Q 002336 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~~ 523 (935)
+|++|+|+ .+|..+.. ....+.+.+||..|.+.
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999 89987654 35677889999988643
No 306
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.96 E-value=7.9e-10 Score=120.33 Aligned_cols=106 Identities=28% Similarity=0.352 Sum_probs=92.8
Q ss_pred CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 411 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 411 ~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
..++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..|..+..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3468999999999998 899999999999999999999999988 58999999999999999996666678999999999
Q ss_pred ccccccCCCCCCccccC---CceeeeecCCCC
Q 002336 490 HIENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~ 518 (935)
+|++|+|+ .+|...+. ....+.+.+|..
T Consensus 154 ~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 154 SLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp ECTTSCCS-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCC-ccCHHHhcCcCCCCEEECCCCcC
Confidence 99999999 78876643 445666777764
No 307
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.95 E-value=4.8e-10 Score=125.93 Aligned_cols=107 Identities=22% Similarity=0.287 Sum_probs=49.2
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCcc----Ccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYM----GSLPNLQ 487 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l----~~l~~L~ 487 (935)
++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..| .|.++++|+.|+|++|+|+ .+|..+ ..+++|+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCC
Confidence 345555555555543333344555555555555555554444 3445555555555555555 233322 3445555
Q ss_pred ccccccccCCCCCCccccC-C----ceeeeecCCCCCcc
Q 002336 488 ELHIENNSFVGEIPPALLT-G----KVIFKYDNNPKLHK 521 (935)
Q Consensus 488 ~L~l~~N~l~g~iP~~l~~-~----~~~~~~~~n~~~~~ 521 (935)
.|+|++|+|+ .+|...+. . ...+.+.+||+.|.
T Consensus 167 ~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 167 LLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp EEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred EEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCC
Confidence 5555555554 33322111 1 02245566666654
No 308
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.95 E-value=1e-09 Score=118.08 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=88.9
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|.++++|++|+|++|++++.++. +.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999977777789999999999999999998885 79999999999999999977777789999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCC
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
|++|++++..|..+.. ....+.+.+|..
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 9999999444433332 455666677754
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.94 E-value=3.3e-10 Score=119.29 Aligned_cols=124 Identities=20% Similarity=0.279 Sum_probs=97.1
Q ss_pred CCCCCCCCCCceEEEeCC-------CCCcEEEEEccCCCCcccCCccccCccccccccccccc-CCCCCC-Ccccccccc
Q 002336 393 RGDPCVPVPWEWVTCSTT-------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLP-DMSRLIDLR 463 (935)
Q Consensus 393 ~~dpC~~~~w~~v~c~~~-------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~-l~g~~p-~~~~l~~L~ 463 (935)
..++|.+..|..+.++|. .+..++.|+|++|++++..+..|.++++|+.|+|++|+ +++..+ .|.++++|+
T Consensus 4 cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~ 83 (239)
T 2xwt_C 4 SSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVT 83 (239)
T ss_dssp CSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCC
T ss_pred CCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCc
Confidence 345665444455553342 24579999999999997767789999999999999997 888777 689999999
Q ss_pred cccccc-ccccCCCCCccCccccccccccccccCCCCCCccccC--Cce---eeeecCCCC
Q 002336 464 IVHLEN-NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKV---IFKYDNNPK 518 (935)
Q Consensus 464 ~L~L~~-N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~---~~~~~~n~~ 518 (935)
.|+|++ |++++..|..+.++++|+.|++++|+++ .+|. +.. ... .+.+.+|+.
T Consensus 84 ~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~~L~l~~N~~ 142 (239)
T 2xwt_C 84 HIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDIFFILEITDNPY 142 (239)
T ss_dssp EEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCSEEEEEEESCTT
T ss_pred EEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-cccccccccccEEECCCCcc
Confidence 999999 9999655678999999999999999999 4887 332 222 566677743
No 310
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.94 E-value=1.5e-09 Score=115.18 Aligned_cols=131 Identities=17% Similarity=0.086 Sum_probs=99.1
Q ss_pred ccc-ccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCc--ccccceeeeccceEEEEEEecCCCCH
Q 002336 620 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 620 ~LG-~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hpn--Iv~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
.++ .|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 56669999998877888999987543 2356889999999996544 45688888877788999999999888
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC--------------------------------------------
Q 002336 697 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 732 (935)
Q Consensus 697 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~-------------------------------------------- 732 (935)
. ... .+ ...++.++++.|+.||+..
T Consensus 103 ~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 221 11 2367788888888888621
Q ss_pred -----------CCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 733 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 733 -----------~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
...++|||++|.||++++++.+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999998753
No 311
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.94 E-value=5.3e-10 Score=114.07 Aligned_cols=89 Identities=25% Similarity=0.277 Sum_probs=80.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 4589999999999998777889999999999999999999998 699999999999999999955555789999999999
Q ss_pred cccccCCCCC
Q 002336 491 IENNSFVGEI 500 (935)
Q Consensus 491 l~~N~l~g~i 500 (935)
|++|.+....
T Consensus 133 L~~N~~~C~c 142 (193)
T 2wfh_A 133 IGANPLYCDC 142 (193)
T ss_dssp CCSSCEECSG
T ss_pred eCCCCeecCC
Confidence 9999998543
No 312
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.94 E-value=4.6e-10 Score=133.64 Aligned_cols=82 Identities=29% Similarity=0.383 Sum_probs=42.7
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCC-CCccCccccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELHIE 492 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~i-P~~l~~l~~L~~L~l~ 492 (935)
+|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +|.+++|++|+.|+|++|+|++.+ |..+++|++|+.|+|+
T Consensus 464 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 464 LVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECT
T ss_pred cCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEec
Confidence 4555555555555 455555555555555555555554 335555555555555555555443 5555555555555555
Q ss_pred cccCC
Q 002336 493 NNSFV 497 (935)
Q Consensus 493 ~N~l~ 497 (935)
+|+|+
T Consensus 542 ~N~l~ 546 (567)
T 1dce_A 542 GNSLC 546 (567)
T ss_dssp TSGGG
T ss_pred CCcCC
Confidence 55555
No 313
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.93 E-value=6.8e-10 Score=119.54 Aligned_cols=106 Identities=15% Similarity=0.035 Sum_probs=87.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+ .+.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3469999999999997777789999999999999999998887 689999999999999999977778899999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCC
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+++|++++..+..+.. ....+.+.+|.
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 135 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNL 135 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCc
Confidence 9999998544434433 34455556664
No 314
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.93 E-value=4.2e-10 Score=134.01 Aligned_cols=102 Identities=25% Similarity=0.312 Sum_probs=89.2
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~ 493 (935)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.+++|++|+.|+|++|+|++ +| .+++|++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 57889999999995 786 999999999999999999544489999999999999999996 88 899999999999999
Q ss_pred ccCCCCC-CccccC--CceeeeecCCCCC
Q 002336 494 NSFVGEI-PPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 494 N~l~g~i-P~~l~~--~~~~~~~~~n~~~ 519 (935)
|+|++.+ |..+.. ....+.+++|+..
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 9999766 888765 4566777888643
No 315
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=9.3e-10 Score=136.74 Aligned_cols=104 Identities=17% Similarity=0.285 Sum_probs=93.1
Q ss_pred cEEEEEccCCCCcccCCcccc--CcccccccccccccCCCCCCCcccccccccccccc------ccccCCCCCccCcccc
Q 002336 414 RITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLPN 485 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~------N~l~g~iP~~l~~l~~ 485 (935)
+|+.|+|++|+|+ .+|..+. +|++|+.|+|++|+|++.++.+.++++|+.|+|++ |++.+.+|..+++|++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~ 807 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCC
Confidence 8999999999999 8999887 99999999999999999545789999999999976 8889999999999999
Q ss_pred ccccccccccCCCCCCccccCCceeeeecCCCCC
Q 002336 486 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 519 (935)
Q Consensus 486 L~~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~~~ 519 (935)
|+.|+|++|+| +.||..+......+.+++|+..
T Consensus 808 L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 808 LIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp CCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred CCEEECCCCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 99999999999 6999998877777888888865
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.91 E-value=6.7e-10 Score=128.66 Aligned_cols=109 Identities=23% Similarity=0.307 Sum_probs=96.1
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++ +| .+..+++|+.|+|++|.|++.+| .|.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 195 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp CTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 4689999999999994 55 69999999999999999999988 699999999999999999988899999999999999
Q ss_pred cccccCCCCCCccccC---CceeeeecCCCCCcccc
Q 002336 491 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~---~~~~~~~~~n~~~~~~~ 523 (935)
|++|+|+ .+|...+. ....+.+.+||+.|.+.
T Consensus 273 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999 66665543 45677889999998754
No 317
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.90 E-value=1.2e-09 Score=126.50 Aligned_cols=115 Identities=20% Similarity=0.238 Sum_probs=95.0
Q ss_pred CceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccccccc
Q 002336 402 WEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 472 (935)
Q Consensus 402 w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l 472 (935)
|..+.|... .+++++.|+|++|+|++..|..|.+|++|+.|+|++|+|++..| .|.++++|+.|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 455666543 24579999999999999889999999999999999999999887 689999999999999999
Q ss_pred cCCCCCccCccccccccccccccCCCCCCccccC---CceeeeecCCC
Q 002336 473 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 517 (935)
Q Consensus 473 ~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~ 517 (935)
++..+..++.+++|+.|+|++|+++ .+|...+. ....+.+.+|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCC
Confidence 9666667999999999999999999 67764433 33444555543
No 318
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.89 E-value=3.2e-10 Score=139.14 Aligned_cols=93 Identities=31% Similarity=0.399 Sum_probs=85.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|.|+..+..|++|++|+.|+|++|+|+ .||.+|++|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 468999999999999 9999999999999999999999955447999999999999999998 99999999999999999
Q ss_pred ccccCCCCCCccccC
Q 002336 492 ENNSFVGEIPPALLT 506 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~ 506 (935)
++|.|+|.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 999999988887654
No 319
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.89 E-value=9e-10 Score=112.52 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=82.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..|..|++|++|+.|+|++|++++..| .++++++|+.|+|++|++.+.+| .+..+++|+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 3578999999999998888899999999999999999998666 68889999999999998444777 688899999999
Q ss_pred cccccCCCCCCcccc--CCceeeeecCCC
Q 002336 491 IENNSFVGEIPPALL--TGKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~--~~~~~~~~~~n~ 517 (935)
+++|+++ .+| .+. .....+.+.+|+
T Consensus 166 l~~n~i~-~~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 166 IQFDGVH-DYR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CTTBCCC-CCT-TGGGCSSCCEEEECBC-
T ss_pred CCCCCCc-ChH-HhccCCCCCEEEeeCcc
Confidence 9999998 455 232 244556666665
No 320
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.89 E-value=1.4e-09 Score=130.60 Aligned_cols=106 Identities=18% Similarity=0.073 Sum_probs=76.8
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
+.+++.|+|++|++++..+..|.++++|++|+|++|++++.+| .|.++++|++|+|++|++++..|..|++|++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 4568888888888887777788888888888888888888777 577888888888888888877777888888888888
Q ss_pred cccccCCCCCCccccC--CceeeeecCCC
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
|++|++++..|..+.. ....+.+.+|.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 139 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNF 139 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCc
Confidence 8888877433344433 23334444443
No 321
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.87 E-value=1.5e-09 Score=126.44 Aligned_cols=118 Identities=22% Similarity=0.254 Sum_probs=96.6
Q ss_pred CCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Ccccccccccccccccc
Q 002336 401 PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE 471 (935)
Q Consensus 401 ~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~ 471 (935)
.|..+.|... -+.+++.|+|++|+|++..|..|.++++|++|+|++|.+++..| .|.++++|+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3566777643 24578999999999998888899999999999999999999887 69999999999999999
Q ss_pred ccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCC
Q 002336 472 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 472 l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
+++..+..++++++|+.|+|++|++++..|..+.. ....+.+.+|..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcc
Confidence 99554556899999999999999999666665543 345556666643
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.87 E-value=8.1e-10 Score=129.30 Aligned_cols=107 Identities=21% Similarity=0.188 Sum_probs=90.1
Q ss_pred CCcEEEEEccCCCCcccCCcccc-CcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|.+++.+|..+. +|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|++ +|..++.+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 35899999999999988888886 789999999999999987 445569999999999999995 666699999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCcc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~ 521 (935)
|++|.|+ .+|..+.. ....+.+.+|+..|+
T Consensus 221 Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 9999999 58887654 456678899998874
No 323
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.86 E-value=2.1e-09 Score=116.30 Aligned_cols=107 Identities=21% Similarity=0.213 Sum_probs=91.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..|..|.++++|++|+|++|.+++.++. +.++++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 35899999999999988888899999999999999999998874 89999999999999999965556799999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCC
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
|++|++++..|..+.. ....+.+.+|..
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcC
Confidence 9999999777877654 445566677754
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.86 E-value=1.8e-09 Score=119.43 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=93.1
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++|+.|+|++|++++..|..|.++++|+.|+|++|.+++.++ .+..+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 589999999999998889999999999999999999999888 6899999999999999999 99999999999999999
Q ss_pred ccccCCCCCCccccC---------CceeeeecCCCCCc
Q 002336 492 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 520 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~---------~~~~~~~~~n~~~~ 520 (935)
++|+++ .+|...+. ....+.+.+||..+
T Consensus 271 ~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 271 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 999999 66654442 22346678888654
No 325
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.86 E-value=1.2e-09 Score=109.46 Aligned_cols=101 Identities=23% Similarity=0.268 Sum_probs=81.6
Q ss_pred CcEEEEEccCCCCcccCCccccCcc-cccccccccccCCCCCCCccccccccccccccccccCCCCCc-cCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~~L~~L~ 490 (935)
.+++.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. +.+.++++|+.|+|++|+++ .+|.. ++.+++|+.|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEE
Confidence 57899999999998 5654 66655 999999999999986 88999999999999999999 45554 48999999999
Q ss_pred cccccCCCCCCc--cccC--CceeeeecCCCC
Q 002336 491 IENNSFVGEIPP--ALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 491 l~~N~l~g~iP~--~l~~--~~~~~~~~~n~~ 518 (935)
|++|+++ .+|. .+.. ....+.+.+|+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCC
Confidence 9999996 7886 4443 345566677764
No 326
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.85 E-value=7.7e-10 Score=125.41 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=94.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..+.+..+++|+.|+|++|+++ .+|..++.+++|+.|+|
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 45899999999999988899999999999999999999987667888999999999999999 78888999999999999
Q ss_pred ccccCCCCCCccccCCceeeeecCCCCCcc
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n~~~~~ 521 (935)
++|+++ .+|.........+.+.+|+..|.
T Consensus 326 ~~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 326 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCccc-eeCchhhccCCEEEcCCCCccch
Confidence 999998 67765555667788899988763
No 327
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.85 E-value=5.9e-10 Score=122.51 Aligned_cols=106 Identities=19% Similarity=0.224 Sum_probs=82.3
Q ss_pred CCcEEEEEccCCCCcccCCccc--cCcccccccccccccCCCCCCCcccc-----ccccccccccccccCCCCCccCccc
Q 002336 412 PPRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLP 484 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i--~~L~~L~~L~Ls~N~l~g~~p~~~~l-----~~L~~L~L~~N~l~g~iP~~l~~l~ 484 (935)
.++|+.|+|++|+++|.+|..+ ..+++|++|+|++|++++.++.+..+ ++|++|+|++|++++..|..+++++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 3578899999999998888876 88899999999999999884456666 8899999999999877778899999
Q ss_pred cccccccccccCCCCC--Cccc--c--CCceeeeecCCC
Q 002336 485 NLQELHIENNSFVGEI--PPAL--L--TGKVIFKYDNNP 517 (935)
Q Consensus 485 ~L~~L~l~~N~l~g~i--P~~l--~--~~~~~~~~~~n~ 517 (935)
+|+.|+|++|++.|.+ |..+ . .....+.+++|.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 9999999999987663 3333 1 234445555553
No 328
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.85 E-value=1.5e-09 Score=129.15 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=95.1
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCC-CCCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~-g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
.++|+.|+|++|.+.+.+|..+.++++|+.|+|++|.++ +.+| .+..+++|+.|+|++|++++..|..++++++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 468999999999999889999999999999999999998 5666 68999999999999999998889999999999999
Q ss_pred ccccccCCCCCCccccC--CceeeeecCCCCCcccc
Q 002336 490 HIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKES 523 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~~~ 523 (935)
+|++|++++..|..+.. ....+.+.+|+..|..+
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99999999655554443 45667889999887643
No 329
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.85 E-value=9.1e-10 Score=109.22 Aligned_cols=89 Identities=28% Similarity=0.301 Sum_probs=51.5
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCC--CCccccccccccccccccccCCCC---CccCcccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL--PDMSRLIDLRIVHLENNELTGSLP---SYMGSLPNLQ 487 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~--p~~~~l~~L~~L~L~~N~l~g~iP---~~l~~l~~L~ 487 (935)
++|+.|+|++|++++.+|..+.++++|+.|+|++|.+++.. +.+..+++|+.|+|++|++++..+ ..+..+++|+
T Consensus 71 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~ 150 (168)
T 2ell_A 71 PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLT 150 (168)
T ss_dssp SSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCC
T ss_pred CCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCc
Confidence 35666666666666555555555666666666666666543 345566666666666666663222 2555666666
Q ss_pred ccccccccCCCCCCc
Q 002336 488 ELHIENNSFVGEIPP 502 (935)
Q Consensus 488 ~L~l~~N~l~g~iP~ 502 (935)
.|++++|.+. ++|+
T Consensus 151 ~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 151 YLDGYDREDQ-EAPD 164 (168)
T ss_dssp EETTEETTSC-BCCS
T ss_pred EecCCCCChh-hccc
Confidence 6666666665 5554
No 330
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.85 E-value=1.7e-09 Score=129.80 Aligned_cols=127 Identities=13% Similarity=0.024 Sum_probs=97.0
Q ss_pred CCCCCCCCCC-CCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccc
Q 002336 391 NDRGDPCVPV-PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLI 460 (935)
Q Consensus 391 ~w~~dpC~~~-~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~ 460 (935)
.|...+|... .+.-+.|... -+..++.|+|++|++++..|..|+++++|++|+|++|++++..| .|.+++
T Consensus 2 ~~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 2 TSSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ----CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred ccccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCcc
Confidence 3556667532 2333555432 24579999999999998888999999999999999999999888 689999
Q ss_pred cccccccccccccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCC
Q 002336 461 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 461 ~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+|++|+|++|++++..|..++++++|+.|+|++|++++..|..+.. ....+.+++|.
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~ 140 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNH 140 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSC
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCc
Confidence 9999999999999888999999999999999999999533444433 34455555554
No 331
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.84 E-value=2.6e-09 Score=114.89 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=51.3
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++|+.|+|++|++++..+..|.++++|++|+|++|.+++..| .+.++++|+.|+|++|++++..+..++++++|+.|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 355555666665554444455555566666666665555554 3555555666666666555444445555555666666
Q ss_pred ccccCCC-CCCcccc
Q 002336 492 ENNSFVG-EIPPALL 505 (935)
Q Consensus 492 ~~N~l~g-~iP~~l~ 505 (935)
++|++++ .+|..+.
T Consensus 132 ~~n~l~~~~l~~~~~ 146 (276)
T 2z62_A 132 AHNLIQSFKLPEYFS 146 (276)
T ss_dssp CSSCCCCCCCCGGGG
T ss_pred cCCccceecCchhhc
Confidence 6655553 2444443
No 332
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.84 E-value=1.7e-09 Score=135.38 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCC-C-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-P-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~-p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
+++|+.|+|++|.+++..|..|.+|++|++|+|++|.+.+.+ | .|.+|++|++|+|++|++++..|..|++|++|+.|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 467888888888888777778888888888888888666665 3 57778888888888888877777777788888888
Q ss_pred ccccccCCCCCCcc--ccC--CceeeeecCCC
Q 002336 490 HIENNSFVGEIPPA--LLT--GKVIFKYDNNP 517 (935)
Q Consensus 490 ~l~~N~l~g~iP~~--l~~--~~~~~~~~~n~ 517 (935)
+|++|.+++.+|.. +.. ....+.+++|.
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~ 134 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQ 134 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCc
Confidence 88888877766654 322 33344555554
No 333
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.84 E-value=6.6e-10 Score=107.92 Aligned_cols=89 Identities=18% Similarity=0.210 Sum_probs=78.5
Q ss_pred CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCC-CCCccCccccccc
Q 002336 411 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQE 488 (935)
Q Consensus 411 ~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~-iP~~l~~l~~L~~ 488 (935)
..++|+.|+|++|++++. ..++++++|+.|+|++|.+++.+|. +.++++|+.|+|++|++++. .|..++.+++|+.
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 346899999999999966 8899999999999999999998885 56799999999999999963 4588999999999
Q ss_pred cccccccCCCCCCc
Q 002336 489 LHIENNSFVGEIPP 502 (935)
Q Consensus 489 L~l~~N~l~g~iP~ 502 (935)
|++++|++++ +|.
T Consensus 118 L~l~~N~l~~-~~~ 130 (149)
T 2je0_A 118 LDLFNCEVTN-LND 130 (149)
T ss_dssp EECTTCGGGG-STT
T ss_pred EeCcCCcccc-hHH
Confidence 9999999994 443
No 334
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.83 E-value=9.2e-10 Score=132.25 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=94.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.+++.+|..|+++++|+.|+|++|.|++.++.+..+++|+.|+|++|+++ .+|..++.+++|+.|+|
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 331 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEEC
Confidence 46899999999999999999999999999999999999997667888999999999999999 78988999999999999
Q ss_pred ccccCCCCCCccccCCceeeeecCCCCCcc
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n~~~~~ 521 (935)
++|+|+ .+|.........+.+++|++.|.
T Consensus 332 ~~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 332 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 999998 56665556677788899988764
No 335
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.82 E-value=2.3e-09 Score=118.70 Aligned_cols=106 Identities=22% Similarity=0.198 Sum_probs=92.5
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.+| .+..+++|+.|+|++|+++ .+|..++.+++|+.|+|
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 479999999999998888899999999999999999999988 6899999999999999999 99999999999999999
Q ss_pred ccccCCCCCCccccC---------CceeeeecCCCCCc
Q 002336 492 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 520 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~---------~~~~~~~~~n~~~~ 520 (935)
++|+++ .+|...+. ....+.+.+||..+
T Consensus 272 ~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 272 HTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 999999 56654332 12356778888763
No 336
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.81 E-value=1.9e-09 Score=129.38 Aligned_cols=108 Identities=20% Similarity=0.218 Sum_probs=68.0
Q ss_pred CcEEEEEccCCCCccc---CCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccc
Q 002336 413 PRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 488 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~---ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~ 488 (935)
++|+.|+|++|.+.+. .+..+..+++|+.|+|++|++++.+| .+.++++|+.|+|++|++++.+|..+.++++| .
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~ 527 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-Y 527 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-E
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-E
Confidence 4566666666666652 22456666666666666666666655 46666667777777777666666666666666 6
Q ss_pred cccccccCCCCCCccccC--CceeeeecCCCCCcc
Q 002336 489 LHIENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 489 L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~ 521 (935)
|+|++|++++.+|..+.. ....+.+.+||..|.
T Consensus 528 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 528 LNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp EECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred EECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 677777766444443322 345566777777664
No 337
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.81 E-value=1.1e-09 Score=109.80 Aligned_cols=87 Identities=22% Similarity=0.223 Sum_probs=78.7
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCc-cccccccccccccccccCCCCC--ccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDM-SRLIDLRIVHLENNELTGSLPS--YMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~-~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~L 489 (935)
++|+.|+|++|+|++. +.|.++++|+.|+|++|.|++.+|.+ ..+++|+.|+|++|+++ .+|. .++.+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999965 78999999999999999999887765 89999999999999996 7887 89999999999
Q ss_pred ccccccCCCCCCcc
Q 002336 490 HIENNSFVGEIPPA 503 (935)
Q Consensus 490 ~l~~N~l~g~iP~~ 503 (935)
++++|.++ .+|..
T Consensus 119 ~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 119 CILRNPVT-NKKHY 131 (176)
T ss_dssp ECCSSGGG-GSTTH
T ss_pred EecCCCCC-CcHhH
Confidence 99999998 77764
No 338
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.79 E-value=2.3e-09 Score=118.08 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=90.9
Q ss_pred CCcEEEEEccCCCCcccCCcccc-CcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..|..+. .+++|++|+|++|.+++. |....+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 35899999999999988777774 789999999999999887 54556999999999999999 5677799999999999
Q ss_pred cccccCCCCCCccccC--CceeeeecCCCCCcc
Q 002336 491 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~~~ 521 (935)
|++|+++ .+|..+.. ....+.+++|+..|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999 78887654 456778899998864
No 339
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.79 E-value=2.1e-09 Score=134.47 Aligned_cols=107 Identities=22% Similarity=0.312 Sum_probs=89.7
Q ss_pred CCcEEEEEccCCCCc-----ccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccc
Q 002336 412 PPRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPN 485 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~-----g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~ 485 (935)
.++|+.|+|++|.++ +..|..|.+|++|+.|+|++|+|++.+| .+.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 357888999999987 4455678899999999999999999988 478999999999999999965555555 89
Q ss_pred ccccccccccCCCCCCccccCCceeeeecCCCCCcc
Q 002336 486 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 521 (935)
Q Consensus 486 L~~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~~~~~ 521 (935)
|+.|+|++|+|+|.+|..+. ....+.+.+||+.|.
T Consensus 528 L~~L~Ls~N~l~~~~~~~~~-~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVFV-SLSVLDITHNKFICE 562 (844)
T ss_dssp CCEEEEEEECCCCCCSCCCS-SCCEEEEEEECCCCS
T ss_pred ccEEECCCCcCCCCChhHhC-CcCEEEecCCCcccc
Confidence 99999999999988877654 566788899999884
No 340
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.78 E-value=5.4e-09 Score=125.49 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=82.5
Q ss_pred CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCcccccccc
Q 002336 411 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 411 ~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
..++|+.|+|++|.+++..|..|++|++|+.|+|++|.|++.++. |+++++|++|+|++|++++..|..++.+++|+.|
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 346788888888888877777788888888888888888877775 5888888888888888888777788888888888
Q ss_pred ccccccCCCCCCccccCCceeeeecCCC
Q 002336 490 HIENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
+|++|.++ .+|.........+.+.+|.
T Consensus 177 ~L~~N~l~-~~~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 177 QLSSNRLT-HVDLSLIPSLFHANVSYNL 203 (597)
T ss_dssp ECTTSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred ECcCCCCC-CcChhhhhhhhhhhcccCc
Confidence 88888888 4555444445555555553
No 341
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.78 E-value=4.8e-09 Score=120.99 Aligned_cols=115 Identities=19% Similarity=0.202 Sum_probs=93.8
Q ss_pred CceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccccccc
Q 002336 402 WEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 472 (935)
Q Consensus 402 w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l 472 (935)
|..+.|... .++.++.|+|++|++++..+..|.+|++|+.|+|++|.|++..+ .|.++++|+.|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 455666543 24578999999999998888999999999999999999999887 689999999999999999
Q ss_pred cCCCCCccCccccccccccccccCCCCCCccccC---CceeeeecCCC
Q 002336 473 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 517 (935)
Q Consensus 473 ~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~ 517 (935)
++..+..+..+++|+.|+|++|+++ .+|...+. ....+.+.+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCC
Confidence 9655567999999999999999998 66664433 33445555543
No 342
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.77 E-value=3.8e-09 Score=115.43 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=92.1
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCC-CCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG-PLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g-~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
.++|+.|+|++|.+.+..|..+.++++|+.|+|++|.+++ .+| .+..+++|+.|+|++|++++..|..+..+++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 3589999999999999999999999999999999999998 455 68999999999999999998889999999999999
Q ss_pred ccccccCCCCCCccccC--CceeeeecCCCCC
Q 002336 490 HIENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~~ 519 (935)
+|++|++++..+..+.. ....+.+++|...
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 99999999544434432 4556677777643
No 343
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.76 E-value=1.3e-08 Score=113.95 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=106.4
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEcc--Ccc-hhhhHHHHHHHHHHHhcC--CCcccccceeeecc---ceEEEEEE
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYE 689 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~--~~~-~~~~~~~~~E~~iL~~L~--HpnIv~l~g~~~~~---~~~~lV~E 689 (935)
.+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 356899999999999876 4678888765 321 123457889999999997 45578888888766 45799999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-------------------------------------
Q 002336 690 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC------------------------------------- 732 (935)
Q Consensus 690 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~------------------------------------- 732 (935)
|++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99987775421 223678888999999999999999720
Q ss_pred ------------------CCceEecCCCCCCccccCCCc--EEEeecccccc
Q 002336 733 ------------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQ 764 (935)
Q Consensus 733 ------------------~~~ivH~DLkp~NILld~~~~--vkL~DFGla~~ 764 (935)
...++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998865
No 344
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.76 E-value=5.9e-09 Score=115.39 Aligned_cols=115 Identities=22% Similarity=0.339 Sum_probs=92.6
Q ss_pred CCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccccc
Q 002336 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (935)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (935)
|.|..+.|... .+++++.|+|++|++++..|..|.++++|++|+|++|++++..| .+.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 46777877642 23578999999999997777889999999999999999999877 6899999999999999
Q ss_pred cccCCCCCccCccccccccccccccCCCCCCccccC---CceeeeecCCCC
Q 002336 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (935)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~ 518 (935)
+++ .+|..+. ++|+.|++++|+++ .+|...+. ....+.+.+|..
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCcc
Confidence 999 8888776 89999999999998 66654332 344555666654
No 345
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.75 E-value=6.5e-09 Score=121.01 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=76.8
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++|+.|+|++|++++..|..|.+|++|++|+|++|++++.++. |.++++|+.|+|++|++++..|..+.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 5778888888888877777888888888888888888877663 677888888888888888777777888888888888
Q ss_pred ccccCCCCCCccccC--CceeeeecCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
++|++++..|..+.. ....+.+.+|.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred CCCccceeChhhccCCCCCCEEECCCCc
Confidence 888887554544433 33444555553
No 346
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.75 E-value=2.8e-09 Score=125.44 Aligned_cols=106 Identities=14% Similarity=0.146 Sum_probs=80.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCC--CCC-CccccccccccccccccccCCCCCc-cCcccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG--PLP-DMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQ 487 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g--~~p-~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~~L~ 487 (935)
.++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+| .+.++++|+.|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4578888888888888788888888888888888888886 344 4778888888888888888767764 67778888
Q ss_pred ccccccccCCCCCCccccCCceeeeecCCC
Q 002336 488 ELHIENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 488 ~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
.|+|++|++++.+|..+......+.+++|.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNK 432 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCc
Confidence 888888888777777765555556666664
No 347
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.75 E-value=2.7e-09 Score=117.11 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=78.0
Q ss_pred CCcEEEEEccCCCCccc--CC--ccccCcccccccccccccCCCCCC---C-ccccccccccccccccccCCCCCccCcc
Q 002336 412 PPRITKIALSGKNLKGE--IP--PELKNMEALTELWLDGNFLTGPLP---D-MSRLIDLRIVHLENNELTGSLPSYMGSL 483 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~--ip--~~i~~L~~L~~L~Ls~N~l~g~~p---~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l 483 (935)
.++|+.|+|++|++.|. ++ ..++++++|++|+|++|+++...+ . +.++++|+.|+|++|++++.+|..++.+
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 45788888888887753 32 234678888888888888864333 1 4677888888888888887778777776
Q ss_pred ---ccccccccccccCCCCCCccccCCceeeeecCCCC
Q 002336 484 ---PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPK 518 (935)
Q Consensus 484 ---~~L~~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~~ 518 (935)
++|+.|+|++|+|+ .+|..+......+.+++|..
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRL 284 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcC
Confidence 58888888888888 78887776666666666653
No 348
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.75 E-value=5.3e-09 Score=123.10 Aligned_cols=105 Identities=18% Similarity=0.267 Sum_probs=69.5
Q ss_pred CcEEEEEccCCCCcccCCcc-ccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPE-LKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~-i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
++|+.|+|++|.+++.+|.. +..+++|+.|+|++|++++.+| .+. ++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 374 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~ 450 (520)
T 2z7x_B 374 KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELN 450 (520)
T ss_dssp TTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEE
Confidence 45666666666666545543 5556666666666666665554 232 57777777777777 7777777888888888
Q ss_pred cccccCCCCCCcc-ccC--CceeeeecCCCCCcc
Q 002336 491 IENNSFVGEIPPA-LLT--GKVIFKYDNNPKLHK 521 (935)
Q Consensus 491 l~~N~l~g~iP~~-l~~--~~~~~~~~~n~~~~~ 521 (935)
|++|+|+ .+|.. +.. ....+.+.+|+..|.
T Consensus 451 L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 451 VASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 8888887 67776 322 345567788887764
No 349
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.75 E-value=4e-09 Score=107.65 Aligned_cols=88 Identities=17% Similarity=0.274 Sum_probs=46.9
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~ 493 (935)
+|+.|+|++|+++ .+| .+..+++|+.|+|++|.++. ++.+..+++|+.|+|++|++++..|..++.|++|+.|+|++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 4555555555555 444 45555555555555554332 23455555555555555555555555555555555555555
Q ss_pred ccCCCCCCccc
Q 002336 494 NSFVGEIPPAL 504 (935)
Q Consensus 494 N~l~g~iP~~l 504 (935)
|++++.+|..+
T Consensus 122 n~i~~~~~~~l 132 (197)
T 4ezg_A 122 SAHDDSILTKI 132 (197)
T ss_dssp SBCBGGGHHHH
T ss_pred CccCcHhHHHH
Confidence 55554444433
No 350
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.73 E-value=1e-08 Score=113.23 Aligned_cols=116 Identities=24% Similarity=0.360 Sum_probs=87.0
Q ss_pred CCCceEEEeCC--------CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cccccccccccccccc
Q 002336 400 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 470 (935)
Q Consensus 400 ~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N 470 (935)
+.|..+.|... .++.++.|+|++|++++..+..|+++++|++|+|++|++++..| .+.++++|++|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 35677777532 24578889999999987666788999999999999999998877 6888999999999999
Q ss_pred cccCCCCCccCccccccccccccccCCCCCCccccC--CceeeeecCCCC
Q 002336 471 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 471 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
+++ .+|..+. ++|+.|++++|++++..|..+.. ....+.+.+|..
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcC
Confidence 988 7887765 78999999999998433333332 334455555543
No 351
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.73 E-value=8.1e-09 Score=125.73 Aligned_cols=85 Identities=26% Similarity=0.294 Sum_probs=56.7
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
++|+.|+|++|++++..+..|+++++|++|+|++|.+++.+| .++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 467777777777776555567777777777777777777666 3566667777777777666333335666666666666
Q ss_pred ccccCC
Q 002336 492 ENNSFV 497 (935)
Q Consensus 492 ~~N~l~ 497 (935)
++|+++
T Consensus 105 ~~n~l~ 110 (680)
T 1ziw_A 105 MSNSIQ 110 (680)
T ss_dssp CSSCCC
T ss_pred CCCccC
Confidence 666666
No 352
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.73 E-value=6.5e-09 Score=123.77 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=85.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
+++++.|+|++|++++..|..|.++++|++|+|++|++++..| .|.++++|++|+|++|+++ .+|.. .+++|+.|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 3578999999999997777899999999999999999999877 5899999999999999998 78887 799999999
Q ss_pred cccccCCC-CCCccccC--CceeeeecCCC
Q 002336 491 IENNSFVG-EIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g-~iP~~l~~--~~~~~~~~~n~ 517 (935)
|++|++++ .+|..+.. ....+.+++|.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~ 157 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAK 157 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSB
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCc
Confidence 99999985 44566654 34455566654
No 353
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.73 E-value=1.4e-08 Score=115.02 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=88.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..|..|+++++|++|+|++|.++..++. +.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 45899999999999987788899999999999999999977775 68999999999999999987788899999999999
Q ss_pred cccccCCCCCCccccCCceeeeecCCC
Q 002336 491 IENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
+++|+++ .++.........+.+.+|.
T Consensus 172 l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 172 LSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred CCCCcCC-ccccccccccceeeccccc
Confidence 9999998 4565555555555565553
No 354
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.70 E-value=1.1e-08 Score=121.82 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=81.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCC--C-CccccccccccccccccccCCCCCc-cCcccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL--P-DMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQ 487 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~--p-~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~~L~ 487 (935)
.++++.|+|++|++++.+|..++++++|+.|+|++|++++.. | .+.++++|+.|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 457888888888888888888888888888888888888754 3 5788888888888888888767764 67788888
Q ss_pred ccccccccCCCCCCccccCCceeeeecCCC
Q 002336 488 ELHIENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 488 ~L~l~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
.|+|++|+++|.+|..+......+.+++|.
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~ 461 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNR 461 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCc
Confidence 888888888877777665445555666663
No 355
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.69 E-value=4.4e-09 Score=123.10 Aligned_cols=106 Identities=20% Similarity=0.132 Sum_probs=80.8
Q ss_pred CCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-----------------cccccccccccccccccc
Q 002336 411 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-----------------MSRLIDLRIVHLENNELT 473 (935)
Q Consensus 411 ~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-----------------~~~l~~L~~L~L~~N~l~ 473 (935)
..++|+.|+|++|.+++.+| |+.|++|+.|+|++|.|++.++. ...+++|+.|+|++|+++
T Consensus 56 ~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 56 PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT 133 (487)
T ss_dssp TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCC
T ss_pred CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCC
Confidence 34688999999999987665 88888888888888887764421 123567888888888888
Q ss_pred CCCCCccCccccccccccccccCCCCCCcccc---CCceeeeecCCCC
Q 002336 474 GSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 518 (935)
Q Consensus 474 g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~~~~~~n~~ 518 (935)
+..|..++++++|+.|+|++|.|++.+|..+. .....+.+++|..
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 88888888899999999999999987887765 3455566666653
No 356
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.68 E-value=1.3e-08 Score=124.01 Aligned_cols=106 Identities=22% Similarity=0.183 Sum_probs=83.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.++|+.|+|++|++++..+..|++|++|++|+|++|++++.+| .|+++++|++|+|++|++++..|..++++++|+.|+
T Consensus 72 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 151 (680)
T 1ziw_A 72 LPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELL 151 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEE
T ss_pred ccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEE
Confidence 3578899999999984444468899999999999999988877 588899999999999999988888888999999999
Q ss_pred cccccCCCCCCcccc----CCceeeeecCCC
Q 002336 491 IENNSFVGEIPPALL----TGKVIFKYDNNP 517 (935)
Q Consensus 491 l~~N~l~g~iP~~l~----~~~~~~~~~~n~ 517 (935)
|++|++++..|..+. .....+.+.+|.
T Consensus 152 L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 152 LSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ccCCcccccCHHHhhccccccccEEECCCCc
Confidence 999999865555432 233455566664
No 357
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.68 E-value=8.9e-09 Score=121.89 Aligned_cols=90 Identities=22% Similarity=0.269 Sum_probs=58.3
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCC-ccccccccccccccccccC-CCCCccCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~L~ 490 (935)
++|+.|+|++|++++..|..|++|++|++|+|++|.+++.+|. ++++++|++|+|++|++++ .+|..++++++|+.|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 4566666666666666666666666666666666666666663 6666666666666666664 3455666666666666
Q ss_pred cccccCCCCCCc
Q 002336 491 IENNSFVGEIPP 502 (935)
Q Consensus 491 l~~N~l~g~iP~ 502 (935)
+++|++.+.+|.
T Consensus 130 L~~n~~~~~~~~ 141 (549)
T 2z81_A 130 IGNVETFSEIRR 141 (549)
T ss_dssp EEESSSCCEECT
T ss_pred CCCCccccccCH
Confidence 666665555654
No 358
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.68 E-value=2.1e-09 Score=118.08 Aligned_cols=105 Identities=18% Similarity=0.163 Sum_probs=72.0
Q ss_pred CCcEEEEEccCCCCcccCCccccCc-----ccccccccccccCCCCCC-CccccccccccccccccccCC--CCCcc--C
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGS--LPSYM--G 481 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L-----~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~--iP~~l--~ 481 (935)
.++|+.|+|++|++++. |..++.+ ++|++|+|++|++++.+| .++++++|+.|+|++|++.|. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 35778888888888766 7777776 788888888888877775 577788888888888887765 33444 7
Q ss_pred ccccccccccccccCCC--CCCcccc---CCceeeeecCCC
Q 002336 482 SLPNLQELHIENNSFVG--EIPPALL---TGKVIFKYDNNP 517 (935)
Q Consensus 482 ~l~~L~~L~l~~N~l~g--~iP~~l~---~~~~~~~~~~n~ 517 (935)
.+++|+.|+|++|+|++ .+|..++ .....+.+++|.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 77788888888888772 2333332 234455556664
No 359
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.68 E-value=7.7e-09 Score=113.38 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=60.4
Q ss_pred cEEEEEccCCCCcccCCccc--cCcccccccccccccCCCCCCC-----ccccccccccccccccccCCCCCccCccccc
Q 002336 414 RITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 486 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i--~~L~~L~~L~Ls~N~l~g~~p~-----~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L 486 (935)
+|++|+|++|++.|.+|..+ .++++|+.|+|++|.+++..|. +..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46777777777777777776 7777777777777777776552 3457777777777777776666677777777
Q ss_pred cccccccccCCC
Q 002336 487 QELHIENNSFVG 498 (935)
Q Consensus 487 ~~L~l~~N~l~g 498 (935)
+.|+|++|++.|
T Consensus 172 ~~L~Ls~N~l~~ 183 (310)
T 4glp_A 172 TSLDLSDNPGLG 183 (310)
T ss_dssp CEEECCSCTTCH
T ss_pred CEEECCCCCCcc
Confidence 777777777654
No 360
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.67 E-value=1.7e-08 Score=119.84 Aligned_cols=93 Identities=18% Similarity=0.302 Sum_probs=71.2
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccC-CCCCccCcccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQEL 489 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~L 489 (935)
.++|+.|+|++|.+++..|..|++|++|++|+|++|++++..+ .++++++|++|+|++|++++ .+|..++++++|+.|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 154 (570)
T 2z63_A 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (570)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred chhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEE
Confidence 4578888888888876666778888888888888888887766 57888888888888888876 477888888888888
Q ss_pred ccccccCCCCCCccc
Q 002336 490 HIENNSFVGEIPPAL 504 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l 504 (935)
++++|++++..|..+
T Consensus 155 ~l~~n~l~~~~~~~~ 169 (570)
T 2z63_A 155 DLSSNKIQSIYCTDL 169 (570)
T ss_dssp ECTTSCCCEECGGGG
T ss_pred eCcCCccceecHHHc
Confidence 888888875444444
No 361
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.66 E-value=9.7e-09 Score=108.00 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=75.1
Q ss_pred CcEEEEEccC-CCCcccCCccccCcccccccccccccCCCCCCCcccccccc---ccccccc-cccCCCCCccCcccccc
Q 002336 413 PRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLR---IVHLENN-ELTGSLPSYMGSLPNLQ 487 (935)
Q Consensus 413 ~~l~~L~Ls~-n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~---~L~L~~N-~l~g~iP~~l~~l~~L~ 487 (935)
++|+.|+|++ |++++..+..|.++++|+.|+|++|.+++ +|.+.++++|+ .|+|++| ++++..+..+.++++|+
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 4788888887 88885555678888888888888888887 45577777777 8888888 78754455678888888
Q ss_pred -ccccccccCCCCCCccccCC--ceeeeecCCC
Q 002336 488 -ELHIENNSFVGEIPPALLTG--KVIFKYDNNP 517 (935)
Q Consensus 488 -~L~l~~N~l~g~iP~~l~~~--~~~~~~~~n~ 517 (935)
.|++++|+++ .||...+.. ...+.+.+|+
T Consensus 159 ~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred eEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8888888887 777765543 2334455564
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.65 E-value=7.5e-09 Score=122.89 Aligned_cols=87 Identities=25% Similarity=0.446 Sum_probs=45.1
Q ss_pred CceE-EEeCCCCCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCcc
Q 002336 402 WEWV-TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYM 480 (935)
Q Consensus 402 w~~v-~c~~~~~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l 480 (935)
|.++ .|.|. +|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +
T Consensus 50 ~~~l~~C~~~---~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip--~~l~~L~~L~Ls~N~l~~-ip~-l 118 (571)
T 3cvr_A 50 VSLLKECLIN---QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP--ELPASLEYLDACDNRLST-LPE-L 118 (571)
T ss_dssp HHHHHHHHHT---TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC--CCCTTCCEEECCSSCCSC-CCC-C
T ss_pred hhhccccccC---CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc--cccCCCCEEEccCCCCCC-cch-h
Confidence 5555 45442 45556666666654 555442 45555555555555 233 334555555555555553 554 4
Q ss_pred CccccccccccccccCCCCCCc
Q 002336 481 GSLPNLQELHIENNSFVGEIPP 502 (935)
Q Consensus 481 ~~l~~L~~L~l~~N~l~g~iP~ 502 (935)
++ +|+.|+|++|+|++ ||.
T Consensus 119 ~~--~L~~L~Ls~N~l~~-lp~ 137 (571)
T 3cvr_A 119 PA--SLKHLDVDNNQLTM-LPE 137 (571)
T ss_dssp CT--TCCEEECCSSCCSC-CCC
T ss_pred hc--CCCEEECCCCcCCC-CCC
Confidence 33 55555555555553 444
No 363
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.64 E-value=1.9e-08 Score=112.30 Aligned_cols=103 Identities=20% Similarity=0.230 Sum_probs=85.7
Q ss_pred CCCCceEEEeCC--------CCCcEEEEEccCCCCcccCC-ccccCcccccccccccccCCCCCC--Cccccccccc-cc
Q 002336 399 PVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRI-VH 466 (935)
Q Consensus 399 ~~~w~~v~c~~~--------~~~~l~~L~Ls~n~l~g~ip-~~i~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~-L~ 466 (935)
.|.|..|.|+.. -+.++++|+|++|+|+ .|| ..|.+|++|++|+|++|++.+.+| .|.+|++|+. +.
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 346777888753 2357999999999999 565 579999999999999999998877 4789998765 67
Q ss_pred cccccccCCCCCccCccccccccccccccCCCCCCcc
Q 002336 467 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA 503 (935)
Q Consensus 467 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~ 503 (935)
++.|+++...|..+..+++|+.|++++|+++ .+|+.
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~ 122 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDV 122 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCC
T ss_pred ccCCcccccCchhhhhccccccccccccccc-cCCch
Confidence 7889999666788999999999999999999 55553
No 364
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.61 E-value=1.8e-08 Score=112.50 Aligned_cols=93 Identities=25% Similarity=0.218 Sum_probs=50.3
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC--Ccccccccccccccccc-ccCCCCCccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNE-LTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~L~~N~-l~g~iP~~l~~l~~L~~L 489 (935)
++|+.|+|++|++++..+..|.++++|++|+|++|++++.++ .+.++++|+.|+|++|+ +.+..|..++++++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 355666666666653222235556666666666666655444 35556666666666653 443334455556666666
Q ss_pred ccccccCCCCCCcccc
Q 002336 490 HIENNSFVGEIPPALL 505 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~ 505 (935)
++++|++++..|..+.
T Consensus 180 ~l~~n~l~~~~~~~l~ 195 (353)
T 2z80_A 180 EIDASDLQSYEPKSLK 195 (353)
T ss_dssp EEEETTCCEECTTTTT
T ss_pred ECCCCCcCccCHHHHh
Confidence 6666666544454443
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.58 E-value=2.8e-08 Score=108.02 Aligned_cols=100 Identities=22% Similarity=0.374 Sum_probs=74.2
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++ + +.+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 3578888888888875 3 5688888888888888888876 778888888888888888885444 888888888888
Q ss_pred ccccCCCCCCccccC--CceeeeecCCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
++|+++ .+|. +.. ....+.+.+|+.
T Consensus 186 ~~N~i~-~l~~-l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 186 SKNHIS-DLRA-LAGLKNLDVLELFSQEC 212 (291)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEEEEEEEE
T ss_pred CCCcCC-CChh-hccCCCCCEEECcCCcc
Confidence 888887 4554 322 334455555543
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.57 E-value=4.9e-08 Score=115.90 Aligned_cols=92 Identities=24% Similarity=0.392 Sum_probs=65.9
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~ 493 (935)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. ++ ++|+.|+|++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVST 189 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcC
Confidence 67788888888875 666 67788888888888877 444 56778888888888885 777 65 7888888888
Q ss_pred ccCCCCCCccccCCc-------eeeeecCCCC
Q 002336 494 NSFVGEIPPALLTGK-------VIFKYDNNPK 518 (935)
Q Consensus 494 N~l~g~iP~~l~~~~-------~~~~~~~n~~ 518 (935)
|+|+ .||. +.... ..+.+++|..
T Consensus 190 N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 190 NLLE-SLPA-VPVRNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCS-SCCC-CC--------CCEEEECCSSCC
T ss_pred CCCC-chhh-HHHhhhcccccceEEecCCCcc
Confidence 8887 7777 55444 4556666654
No 367
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.57 E-value=2.4e-08 Score=110.96 Aligned_cols=103 Identities=21% Similarity=0.288 Sum_probs=77.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.+++ + +.+..+++|+.|+|++|.+++. |.+..+++|+.|+|++|++++..|..++++++|+.|+|
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 4578888888888875 3 4688888888888888888875 66788888888888888888777778888888888888
Q ss_pred ccccCCCCCCccccCCceeeeecCCC
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
++|++++..|-.-......+.+.+|+
T Consensus 319 ~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 319 SQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred cCCccccccChhhhhccceeehhhhc
Confidence 88888865553333344556666664
No 368
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.57 E-value=1.2e-08 Score=111.70 Aligned_cols=186 Identities=22% Similarity=0.244 Sum_probs=120.4
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCc--ccccceeeeccc---eEEEEEEecC
Q 002336 619 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 692 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-Hpn--Iv~l~g~~~~~~---~~~lV~E~~~ 692 (935)
+.++.|....||+.. +.+++|+.... .....+.+|+++|+.+. +.. +.+++....... ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 568999999999864 56889985432 34567889999999884 333 334444433332 3478999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc-----------------------------------------
Q 002336 693 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG----------------------------------------- 731 (935)
Q Consensus 693 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~----------------------------------------- 731 (935)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988865332 2356777888888888888888851
Q ss_pred --------------CCCceEecCCCCCCccccC--CCcEEEeeccccccccccccceeecccCCccccCCCCC-------
Q 002336 732 --------------CNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY------- 788 (935)
Q Consensus 732 --------------~~~~ivH~DLkp~NILld~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l------- 788 (935)
....++|||+++.||++++ ...+.|+||+.+.......+... ..... .-..|+..
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~-~~~~~-~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFIS-LMEDD-EEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHT-TCCTT-TSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHH-HHhhc-cccCHHHHHHHHHHc
Confidence 1145899999999999998 45678999998765322111000 00000 00111110
Q ss_pred CCC-------CCCchhHHHHHHHHHHHHHhCCCCCC
Q 002336 789 GNQ-------QLTEKSDVYSFGVVLLELISGKKPVS 817 (935)
Q Consensus 789 ~~~-------~~s~ksDVwS~Gvil~eLltG~~Pf~ 817 (935)
... ......+.|+++.+++++.+|..+|-
T Consensus 253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000 01123689999999999999987653
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.57 E-value=5.6e-08 Score=104.00 Aligned_cols=99 Identities=26% Similarity=0.322 Sum_probs=69.9
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|+|++ +|+ +.+|++|+.|+|++|++++.. .+.. ++|+.|+|++|++++ +| .++.+++|+.|+|
T Consensus 62 l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~-~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 62 FTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLN-GIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCT-TCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcC-cccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 3578888888888884 444 888888888888888888743 3333 788888888888884 44 5778888888888
Q ss_pred ccccCCCCCCcccc--CCceeeeecCCCC
Q 002336 492 ENNSFVGEIPPALL--TGKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~~l~--~~~~~~~~~~n~~ 518 (935)
++|+++ .+| .+. .....+.+.+|..
T Consensus 136 s~N~i~-~~~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 136 RNNKLK-SIV-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp TTSCCC-BCG-GGGGCTTCCEEECTTSCC
T ss_pred CCCcCC-CCh-HHccCCCCCEEECCCCcC
Confidence 888887 454 232 2344555566653
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.56 E-value=5.2e-08 Score=105.90 Aligned_cols=101 Identities=24% Similarity=0.303 Sum_probs=72.3
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.+++ +| .+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++. ..++.+++|+.|+|
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 3578888888888874 43 488888888888888888874 6778888888888888888853 56788888888888
Q ss_pred ccccCCCCCCccccCCceeeeecCCC
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
++|++++..|-.-......+.+++|.
T Consensus 164 ~~N~l~~~~~l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 164 EDNQISDIVPLAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred cCCccccchhhcCCCccCEEECCCCc
Confidence 88888844331111234445556664
No 371
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.56 E-value=3.1e-08 Score=108.63 Aligned_cols=102 Identities=22% Similarity=0.355 Sum_probs=61.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++. ++ +.++++|+.|+|++|++++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 128 l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L 202 (308)
T 1h6u_A 128 LSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHL 202 (308)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEc
Confidence 35677777777777643 32 6677777777777777766544 6677777777777777763 333 666777777777
Q ss_pred ccccCCCCCCccccCCceeeeecCCCC
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n~~ 518 (935)
++|++++..|-.-......+.+.+|+.
T Consensus 203 ~~N~l~~~~~l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 203 KNNQISDVSPLANTSNLFIVTLTNQTI 229 (308)
T ss_dssp TTSCCCBCGGGTTCTTCCEEEEEEEEE
T ss_pred cCCccCccccccCCCCCCEEEccCCee
Confidence 777776333211112333444555543
No 372
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.54 E-value=6.1e-08 Score=106.21 Aligned_cols=101 Identities=25% Similarity=0.449 Sum_probs=81.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++ +|+ +.++++|+.|+|++|.+++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEEC
Confidence 4689999999999985 554 9999999999999999998766 8899999999999999995 555 899999999999
Q ss_pred ccccCCCCCCc-cccCCceeeeecCCCC
Q 002336 492 ENNSFVGEIPP-ALLTGKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~-~l~~~~~~~~~~~n~~ 518 (935)
++|+++ .+|. .-......+.+++|..
T Consensus 181 ~~n~l~-~~~~l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 181 DDNKIS-DISPLASLPNLIEVHLKNNQI 207 (308)
T ss_dssp CSSCCC-CCGGGGGCTTCCEEECTTSCC
T ss_pred CCCccC-cChhhcCCCCCCEEEccCCcc
Confidence 999998 4554 2222445566677754
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.54 E-value=1.7e-09 Score=110.48 Aligned_cols=102 Identities=24% Similarity=0.207 Sum_probs=75.5
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++ +| .+.++++|+.|+|++|.++..++.+..+++|+.|+|++|++++ +| .++.+++|+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 3578888888888885 77 8888888888888888888543346677888888888888885 66 6888888888888
Q ss_pred ccccCCCCCCc--cccC--CceeeeecCCCC
Q 002336 492 ENNSFVGEIPP--ALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~--~l~~--~~~~~~~~~n~~ 518 (935)
++|+++ .+|. .+.. ....+.+.+|+.
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCCcCC-chhHHHHHhcCCCCCEEEecCCcc
Confidence 888887 4443 3322 344555666654
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.53 E-value=5.7e-08 Score=116.38 Aligned_cols=99 Identities=22% Similarity=0.387 Sum_probs=68.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.|++ + +.+.+|++|+.|+|++|.|++. +.+..|++|+.|+|++|+|++..| +..|++|+.|+|
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 4577778888887774 3 4577778888888888877776 667777788888888888876555 777788888888
Q ss_pred ccccCCCCCCccccC--CceeeeecCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
++|+|+ .+|. +.. ....+.+.+|+
T Consensus 183 s~N~i~-~l~~-l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 183 SKNHIS-DLRA-LAGLKNLDVLELFSQE 208 (605)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEECCSEE
T ss_pred cCCCCC-CChH-HccCCCCCEEEccCCc
Confidence 888777 3443 322 33344455554
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.51 E-value=3.6e-09 Score=108.09 Aligned_cols=100 Identities=23% Similarity=0.350 Sum_probs=83.5
Q ss_pred cEEEEEccCCCCcccCCc------cccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccc
Q 002336 414 RITKIALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 487 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~------~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~ 487 (935)
+++.++|+++.+.|.+|. .|.++++|+.|+|++|.+++ +|.+.++++|+.|+|++|+++ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 566777888888888877 99999999999999999999 569999999999999999999 8999888999999
Q ss_pred ccccccccCCCCCCccccC--CceeeeecCCC
Q 002336 488 ELHIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 488 ~L~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
.|+|++|+++ .+| .+.. ....+.+.+|.
T Consensus 97 ~L~L~~N~l~-~l~-~~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 97 ELWISYNQIA-SLS-GIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp EEEEEEEECC-CHH-HHHHHHHSSEEEESEEE
T ss_pred EEECcCCcCC-cCC-ccccCCCCCEEECCCCc
Confidence 9999999999 466 3332 33444555554
No 376
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.50 E-value=8.8e-08 Score=102.49 Aligned_cols=99 Identities=20% Similarity=0.309 Sum_probs=82.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..| +.++++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 458999999999998 677 79999999999999999999887 9999999999999999994 665444 99999999
Q ss_pred ccccCCCCCCccccC--CceeeeecCCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNPK 518 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~~ 518 (935)
++|+++ .+|. +.. ....+.+++|..
T Consensus 114 ~~N~l~-~~~~-l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 114 DNNELR-DTDS-LIHLKNLEILSIRNNKL 140 (263)
T ss_dssp CSSCCS-BSGG-GTTCTTCCEEECTTSCC
T ss_pred cCCccC-CChh-hcCcccccEEECCCCcC
Confidence 999999 4553 333 445566666653
No 377
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.50 E-value=5.8e-08 Score=116.34 Aligned_cols=85 Identities=21% Similarity=0.366 Sum_probs=64.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|.|++. +.|..|++|+.|+|++|.|++.+| +..|++|+.|+|++|+|++ +| .+..|++|+.|+|
T Consensus 130 l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L 204 (605)
T 1m9s_A 130 LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLEL 204 (605)
T ss_dssp CTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEC
T ss_pred CCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEc
Confidence 45788888888888754 577788888888888888887777 7778888888888888874 44 5777888888888
Q ss_pred ccccCCCCCCc
Q 002336 492 ENNSFVGEIPP 502 (935)
Q Consensus 492 ~~N~l~g~iP~ 502 (935)
++|+++ ..|.
T Consensus 205 ~~N~l~-~~p~ 214 (605)
T 1m9s_A 205 FSQECL-NKPI 214 (605)
T ss_dssp CSEEEE-CCCC
T ss_pred cCCcCc-CCcc
Confidence 888887 3443
No 378
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.49 E-value=2.1e-08 Score=110.38 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=78.7
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++. | ....+++|+.|+|++|++++.++.+..+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 168 l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l 244 (317)
T 3o53_A 168 SDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDL 244 (317)
T ss_dssp TTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEEC
T ss_pred cCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEc
Confidence 35899999999999855 3 344599999999999999998889999999999999999999 78999999999999999
Q ss_pred ccccCC-CCCCcccc
Q 002336 492 ENNSFV-GEIPPALL 505 (935)
Q Consensus 492 ~~N~l~-g~iP~~l~ 505 (935)
++|.++ +.+|..+.
T Consensus 245 ~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 245 RGNGFHCGTLRDFFS 259 (317)
T ss_dssp TTCCCBHHHHHHHHH
T ss_pred cCCCccCcCHHHHHh
Confidence 999998 66665544
No 379
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.48 E-value=1.7e-07 Score=93.70 Aligned_cols=152 Identities=20% Similarity=0.104 Sum_probs=89.3
Q ss_pred EEeeecCCCCCCCccCCCCCCCCccccCCCCCCCceeccCCceeeecccccccCCCCCCChHhHhhhceeccCceEEEee
Q 002336 189 AARVNFGALTKDALRYPDDPYDRIWDSDLDRRPNFVVGAASGTVRINTTKNIETRTREYPPVKVMQTAVVGTEGVLSYRL 268 (935)
Q Consensus 189 ~~R~~~g~~~~~~~~y~~d~~~R~W~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~pP~~v~qtA~~~~~~~~~~~~ 268 (935)
.-|+|+|+.. +. |..+|.|+++...... +..+.. ...+.....+.+|..|+|||-.. ..+++|..
T Consensus 7 ~~~INcGg~~---~~---d~~gr~w~~D~~~~~~---g~~~~~-----~~~~~~~~~~~~~~~lY~TaR~~-~~~~tY~f 71 (174)
T 2jwp_A 7 IWAVNAGGES---HV---DVHGIHYRKDPLEGRV---GRASDY-----GMKLPILRSNPEDQVLYQTERYN-EDSFGYDI 71 (174)
T ss_dssp EEEEEETSSS---EE---ETTTEEECSSCSSTTC---CCCCCC-----CTTSCCSSSCHHHHHTTTCCCCC-CSCEEEEE
T ss_pred EEEEECCCCC---cc---CCCCCEEcCCcCcccC---Cccccc-----ccceEecccCCCCchhhhhhccC-CCCeEEEE
Confidence 4599999743 21 6789999998542111 111100 00111112244688999999875 35778887
Q ss_pred cCCCCccccceeeeeccccCcCCCcceEEEeecCcccccccceeeeeccCCCceeeecccccee------------eeee
Q 002336 269 NLEDFPANARAFAYFAEIQDLGPSETRKFKLEQPYFADYSNAVVNIAENANGSYTLYEPSYMNV------------TLNF 336 (935)
Q Consensus 269 ~~~~~~~~~~~~lyFae~~~~~~~~~R~F~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 336 (935)
+.. .+-.|.+-|||+|+.. +..+.|.|||.++.... ...+++...+++...++.--..++ +..+
T Consensus 72 ~v~-~~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~--l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g 147 (174)
T 2jwp_A 72 PIK-EEGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTV--VKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTG 147 (174)
T ss_dssp ECC-SCEEEEEEEEEECCSC-CCSSSSCEEEEETTEEE--EEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCS
T ss_pred EeC-CCeEEEEEEEEecccc-CCCCCeEeEEEECCEEe--ecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCC
Confidence 763 2356777799999974 55799999996554333 233555444332111111000111 2456
Q ss_pred EEEEEeeecCCCcchhhhhhhhhce
Q 002336 337 VLSFSFVKTRDSTLGPLLNAIEISK 361 (935)
Q Consensus 337 ~~~~~~~~~~~s~l~p~ina~e~~~ 361 (935)
.+.+++.|. ..-.|+|||+|+++
T Consensus 148 ~L~I~f~p~--~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 148 KLSVEFVKG--YYDNPKVCALFIMK 170 (174)
T ss_dssp EEEEEEECS--SSCSSSEEEEEEES
T ss_pred eEEEEEecc--CCCCcEEEEEEEEe
Confidence 788888874 34579999999975
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.42 E-value=9.6e-08 Score=110.91 Aligned_cols=100 Identities=25% Similarity=0.309 Sum_probs=55.9
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 492 (935)
++|+.|+|++|++.+..| +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++. ..++++++|+.|+++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAG 361 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCC
Confidence 456666666666654322 5566666666666666666555 55666666666666666643 345666666666666
Q ss_pred cccCCCCCCccccCCceeeeecCCC
Q 002336 493 NNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 493 ~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
+|+++|.+|-.-......+.+.+|+
T Consensus 362 ~n~l~~~~~~~~l~~L~~L~l~~n~ 386 (466)
T 1o6v_A 362 HNQISDLTPLANLTRITQLGLNDQA 386 (466)
T ss_dssp SSCCCBCGGGTTCTTCCEEECCCEE
T ss_pred CCccCccchhhcCCCCCEEeccCCc
Confidence 6666655552222233334444443
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.42 E-value=1.4e-07 Score=109.37 Aligned_cols=80 Identities=31% Similarity=0.444 Sum_probs=42.2
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 492 (935)
++|+.|+|++|++++. |+ +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++..| ++.+++|+.|+++
T Consensus 265 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 265 TKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp TTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred CCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 3455555555555532 22 5555555555555555555433 5555555555555555554433 4555555555555
Q ss_pred cccCC
Q 002336 493 NNSFV 497 (935)
Q Consensus 493 ~N~l~ 497 (935)
+|+++
T Consensus 340 ~n~l~ 344 (466)
T 1o6v_A 340 NNKVS 344 (466)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 55555
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.42 E-value=1.1e-07 Score=110.24 Aligned_cols=87 Identities=28% Similarity=0.476 Sum_probs=50.4
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccC--CCCCccCcc-------
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTG--SLPSYMGSL------- 483 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g--~iP~~l~~l------- 483 (935)
.+|+.|+|++|++++ +|.. +++|+.|+|++|++++ +|. .+++|+.|+|++|+++| .+|.+++.|
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~ 389 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLA 389 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHhhhhccccc
Confidence 478888888888885 6654 5788888888888885 444 57888888888888888 788888887
Q ss_pred ------ccccccccccccCCC--CCCccccC
Q 002336 484 ------PNLQELHIENNSFVG--EIPPALLT 506 (935)
Q Consensus 484 ------~~L~~L~l~~N~l~g--~iP~~l~~ 506 (935)
++|+.|++++|+++| .||.++..
T Consensus 390 ~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~~ 420 (454)
T 1jl5_A 390 EVPELPQNLKQLHVETNPLREFPDIPESVED 420 (454)
T ss_dssp -------------------------------
T ss_pred ccccccCcCCEEECCCCcCCccccchhhHhh
Confidence 778888888888886 77776543
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.41 E-value=2.2e-07 Score=107.70 Aligned_cols=18 Identities=28% Similarity=0.204 Sum_probs=6.8
Q ss_pred cCcccccccccccccCCC
Q 002336 434 KNMEALTELWLDGNFLTG 451 (935)
Q Consensus 434 ~~L~~L~~L~Ls~N~l~g 451 (935)
+.+++|+.|+|++|++++
T Consensus 188 ~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 188 SQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp TTCTTCCEEECCSSCCSC
T ss_pred ccCCCCCEEECcCCcCCe
Confidence 333333333333333333
No 384
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.40 E-value=2.7e-07 Score=106.91 Aligned_cols=96 Identities=25% Similarity=0.251 Sum_probs=61.6
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++ +| ++++++|++|+|++|.|++. | ++++++|++|+|++|++++ +| ++.+++|+.|++
T Consensus 63 l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 63 LTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 3467777777777775 33 67777777777777777764 2 6677777777777777774 44 677777777777
Q ss_pred ccccCCCCCCccccCCceeeeecCC
Q 002336 492 ENNSFVGEIPPALLTGKVIFKYDNN 516 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~~~~~~~~~~n 516 (935)
++|++++ +|-.-......+.+.+|
T Consensus 135 ~~N~l~~-l~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 135 ARNTLTE-IDVSHNTQLTELDCHLN 158 (457)
T ss_dssp TTSCCSC-CCCTTCTTCCEEECTTC
T ss_pred CCCccce-eccccCCcCCEEECCCC
Confidence 7777774 44322233444455555
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.36 E-value=4.4e-07 Score=105.09 Aligned_cols=96 Identities=30% Similarity=0.415 Sum_probs=76.2
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 492 (935)
++|+.|+|++|++++ +| +|+++++|++|+|++|++++ +|.. +.+|+.|+|++|++++ +| .++++++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 579999999999996 88 69999999999999999998 4432 2489999999999996 77 68999999999999
Q ss_pred cccCCCCCCccccCCceeeeecCCC
Q 002336 493 NNSFVGEIPPALLTGKVIFKYDNNP 517 (935)
Q Consensus 493 ~N~l~g~iP~~l~~~~~~~~~~~n~ 517 (935)
+|++++ +|... .....+.+.+|.
T Consensus 204 ~N~l~~-l~~~~-~~L~~L~l~~n~ 226 (454)
T 1jl5_A 204 NNSLKK-LPDLP-LSLESIVAGNNI 226 (454)
T ss_dssp SSCCSS-CCCCC-TTCCEEECCSSC
T ss_pred CCcCCc-CCCCc-CcccEEECcCCc
Confidence 999984 66543 234455555553
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.34 E-value=1.3e-07 Score=113.42 Aligned_cols=85 Identities=26% Similarity=0.307 Sum_probs=59.5
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCccccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 492 (935)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+..++ .+++|+.|+|++|+|+ .+|..++++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 467777777777774 55 455677777777777775433 5667777777777777 777777777777777777
Q ss_pred cccCCCCCCcccc
Q 002336 493 NNSFVGEIPPALL 505 (935)
Q Consensus 493 ~N~l~g~iP~~l~ 505 (935)
+|+|+|.+|..+.
T Consensus 293 ~N~l~~~~~~~l~ 305 (622)
T 3g06_A 293 GNPLSERTLQALR 305 (622)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CCCCCCcCHHHHH
Confidence 7777766666543
No 387
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.33 E-value=2.3e-07 Score=102.87 Aligned_cols=103 Identities=17% Similarity=0.306 Sum_probs=83.4
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccc
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 491 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 491 (935)
.++|+.|+|++|++++ +++ +..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++ +| .+..+++|+.|++
T Consensus 220 ~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEEC
Confidence 4589999999999984 444 88999999999999999874 678899999999999999985 43 5888999999999
Q ss_pred ccccCCCCCCccccC--CceeeeecCCCCC
Q 002336 492 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~--~~~~~~~~~n~~~ 519 (935)
++|++++..|..+.. ....+.+.+|+..
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 999998777665543 4456677777654
No 388
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.26 E-value=1.9e-06 Score=94.87 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=97.7
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCC--C--cccccceeeeccceEEEEEEecCC
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--R--NLVPLIGYCEEEHQRILVYEYMHN 693 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~H--p--nIv~l~g~~~~~~~~~lV~E~~~~ 693 (935)
.+.++.|....||+. |+.+++|+.... .....+.+|.++|+.+.+ . .+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 457899999999998 677888976432 224568899999999865 1 23344443 456899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcC-----------------------------------------
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC----------------------------------------- 732 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~----------------------------------------- 732 (935)
.++.+... ..++..++..++.++++.|+.||+..
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864332 23566677788888888888888521
Q ss_pred -------------------CCceEecCCCCCCccccCCCcEEEeeccccccc
Q 002336 733 -------------------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 765 (935)
Q Consensus 733 -------------------~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~ 765 (935)
...++|+|++|.||+++.+..+.|+||+.+...
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998666799999988643
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.25 E-value=4.4e-08 Score=110.76 Aligned_cols=84 Identities=21% Similarity=0.351 Sum_probs=37.2
Q ss_pred cEEEEEccCCCCc-ccCC---ccccCcccccccccccccCC--C---CCC-Ccccccccccccccccccc----CCCCCc
Q 002336 414 RITKIALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPSY 479 (935)
Q Consensus 414 ~l~~L~Ls~n~l~-g~ip---~~i~~L~~L~~L~Ls~N~l~--g---~~p-~~~~l~~L~~L~L~~N~l~----g~iP~~ 479 (935)
+|+.|+|++|+++ +.+| ..+..+++|+.|+|++|.++ | .+| .+.++++|+.|+|++|+++ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 3444444444444 2233 23344444444444444444 2 223 3444444444444444443 344444
Q ss_pred cCccccccccccccccCC
Q 002336 480 MGSLPNLQELHIENNSFV 497 (935)
Q Consensus 480 l~~l~~L~~L~l~~N~l~ 497 (935)
+..+++|+.|+|++|.++
T Consensus 240 l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp GGGCTTCCEEECTTCCCC
T ss_pred HccCCCcCEEECCCCCCc
Confidence 444444444444444444
No 390
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.25 E-value=8.2e-07 Score=106.57 Aligned_cols=94 Identities=26% Similarity=0.353 Sum_probs=59.6
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCCCccccccccccccccccccCCCCCccCcccccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 493 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~ 493 (935)
+|+.|+|++|.++ .+|.. +++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCC
Confidence 4455555555554 34422 356777777777777633 44567777777777777 5666 466777778888
Q ss_pred ccCCCCCCccccC--CceeeeecCCCCC
Q 002336 494 NSFVGEIPPALLT--GKVIFKYDNNPKL 519 (935)
Q Consensus 494 N~l~g~iP~~l~~--~~~~~~~~~n~~~ 519 (935)
|+|+ .||..+.. ....+.+.+|+..
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 8777 77776554 3345566666643
No 391
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.21 E-value=5.2e-08 Score=110.16 Aligned_cols=107 Identities=16% Similarity=0.203 Sum_probs=86.5
Q ss_pred CcEEEEEccCCCCc--c---cCCccccCcccccccccccccCC----CCCC-CccccccccccccccccccCC----CCC
Q 002336 413 PRITKIALSGKNLK--G---EIPPELKNMEALTELWLDGNFLT----GPLP-DMSRLIDLRIVHLENNELTGS----LPS 478 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~--g---~ip~~i~~L~~L~~L~Ls~N~l~----g~~p-~~~~l~~L~~L~L~~N~l~g~----iP~ 478 (935)
++|+.|+|++|+++ | .+|..+.++++|+.|+|++|.|+ +.+| .+..+++|+.|+|++|++++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 47999999999998 3 34558899999999999999996 5566 588899999999999999866 677
Q ss_pred cc--CccccccccccccccCCC----CCCccc---cCCceeeeecCCCCC
Q 002336 479 YM--GSLPNLQELHIENNSFVG----EIPPAL---LTGKVIFKYDNNPKL 519 (935)
Q Consensus 479 ~l--~~l~~L~~L~l~~N~l~g----~iP~~l---~~~~~~~~~~~n~~~ 519 (935)
.+ +.+++|+.|+|++|.+++ .+|..+ ......+.+.+|+..
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 76 448999999999999996 488876 245566677777654
No 392
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.20 E-value=4.5e-06 Score=90.43 Aligned_cols=140 Identities=19% Similarity=0.243 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCC---cccccceeeeccceEEEEEEecCCC
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 694 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hp---nIv~l~g~~~~~~~~~lV~E~~~~g 694 (935)
.+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3579999999999999989999999996543222346789999999999765 466676653 368999999998
Q ss_pred CHH--------H---HhccCCCC------------------CCCCHHHH-----------------------HHHHHHHH
Q 002336 695 TLR--------D---RLHGSVNQ------------------KPLDWLTR-----------------------LQIAHDAA 722 (935)
Q Consensus 695 sL~--------~---~L~~~~~~------------------~~l~~~~~-----------------------~~i~~qia 722 (935)
++. + .|+..... -.-+|... ...+.+++
T Consensus 96 ~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~ 175 (288)
T 3d1u_A 96 PPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVL 175 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 642 1 12221100 00123221 11222223
Q ss_pred HHhHHh-hhcCCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 723 KGLEYL-HTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 723 ~gL~yL-Hs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
..+..+ .......++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 176 ~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 176 DALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 223211 1122478999999999999988 45889999 554
No 393
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=1.6e-06 Score=97.28 Aligned_cols=74 Identities=8% Similarity=0.126 Sum_probs=55.3
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCc--ccccceeeecc-ceEEEEEEecCCC
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNG 694 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hpn--Iv~l~g~~~~~-~~~~lV~E~~~~g 694 (935)
.+.++.|....+|+... +|+.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999999886 4888999986432 25888999999986433 45566666554 5689999999986
Q ss_pred CHH
Q 002336 695 TLR 697 (935)
Q Consensus 695 sL~ 697 (935)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 553
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.19 E-value=3.4e-07 Score=97.70 Aligned_cols=65 Identities=26% Similarity=0.411 Sum_probs=28.6
Q ss_pred CcccccccccccccCCCC--CCC-ccccccccccccccccccCCCCCccCccc--cccccccccccCCCCCC
Q 002336 435 NMEALTELWLDGNFLTGP--LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP--NLQELHIENNSFVGEIP 501 (935)
Q Consensus 435 ~L~~L~~L~Ls~N~l~g~--~p~-~~~l~~L~~L~L~~N~l~g~iP~~l~~l~--~L~~L~l~~N~l~g~iP 501 (935)
+|++|+.|+|++|+|++. +|. +..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 344444455555544442 222 23444455555555554432 2223333 44555555555544444
No 395
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.18 E-value=1.7e-07 Score=105.13 Aligned_cols=89 Identities=20% Similarity=0.195 Sum_probs=59.9
Q ss_pred CcEEEEEccCCCCcccCC----ccccCcc-cccccccccccCCCCCC-Ccccc-----ccccccccccccccCCCCCccC
Q 002336 413 PRITKIALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLP-DMSRL-----IDLRIVHLENNELTGSLPSYMG 481 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip----~~i~~L~-~L~~L~Ls~N~l~g~~p-~~~~l-----~~L~~L~L~~N~l~g~iP~~l~ 481 (935)
.+|+.|+|++|++++..+ ..+.+++ +|++|+|++|.|++..+ .+..+ ++|+.|+|++|++++..+..++
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 347777777777775555 5566676 77777777777777655 44444 7777777777777766665444
Q ss_pred cc-----ccccccccccccCCCCCC
Q 002336 482 SL-----PNLQELHIENNSFVGEIP 501 (935)
Q Consensus 482 ~l-----~~L~~L~l~~N~l~g~iP 501 (935)
.+ ++|+.|+|++|++++..+
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~ 126 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSS 126 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCH
T ss_pred HHHHhCCCCccEEECcCCcCCcHHH
Confidence 43 677777777777764443
No 396
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.15 E-value=6.4e-06 Score=87.88 Aligned_cols=135 Identities=17% Similarity=0.115 Sum_probs=98.2
Q ss_pred ccccccccE-EEEEEEEC-CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeeccceEEEEEEecCCCC
Q 002336 619 KKIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGT 695 (935)
Q Consensus 619 ~~LG~G~fG-~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~~~~lV~E~~~~gs 695 (935)
+.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556555 68988765 467799997543 23456888999999884 3336677888888889999999999988
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc--------------------------------------------
Q 002336 696 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-------------------------------------------- 731 (935)
Q Consensus 696 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~-------------------------------------------- 731 (935)
+.+..... ......++.++++.|+.||+.
T Consensus 107 ~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 87765421 123345667777777777751
Q ss_pred -----------CCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 732 -----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 732 -----------~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
....++|||+.+.|||+++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01238999999999999987777899999775
No 397
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=9.2e-06 Score=88.75 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=95.0
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCC---cccccceeee-ccceEEEEEEecCCC
Q 002336 619 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 694 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hp---nIv~l~g~~~-~~~~~~lV~E~~~~g 694 (935)
+.++.|....||+. |+.+++|+-.. ......+.+|+++|+.+.+. .+.+++.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 46888999999987 56788887432 23456789999999999642 2455566653 445578999999998
Q ss_pred CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhc-------------------------------------------
Q 002336 695 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 731 (935)
Q Consensus 695 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~------------------------------------------- 731 (935)
+|.+..- ..++..++..++.++++.|+.||+.
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8876322 1234555556666666666666641
Q ss_pred --------------CCCceEecCCCCCCccccC---CCc-EEEeecccccc
Q 002336 732 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 764 (935)
Q Consensus 732 --------------~~~~ivH~DLkp~NILld~---~~~-vkL~DFGla~~ 764 (935)
....++|||+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235799999999999987 455 48999997754
No 398
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.12 E-value=1.6e-07 Score=103.72 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=72.1
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCC-CC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~-~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.+++.|+|++|.+.+.++. +.++++|++|+|++|.+++. +| .+.++++|+.|+|++|++++.+|..++++++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5677888888888765554 56778888888888887765 55 467788888888888888777777777888888888
Q ss_pred cccc-cCCCC-CCcccc--CCceeeeecCC
Q 002336 491 IENN-SFVGE-IPPALL--TGKVIFKYDNN 516 (935)
Q Consensus 491 l~~N-~l~g~-iP~~l~--~~~~~~~~~~n 516 (935)
|++| .+++. +|..+. .....+.+.+|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 8888 56642 444332 23344455555
No 399
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.98 E-value=5.5e-07 Score=99.30 Aligned_cols=102 Identities=20% Similarity=0.285 Sum_probs=87.5
Q ss_pred CcEEEEEccCCCCcccCCccccCc--ccccccccccccCCCCCCCccccccccccccccccccCC-CCCccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNM--EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L--~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~-iP~~l~~l~~L~~L 489 (935)
..++.|+|++|++. |..+..+ ++|+.|+|++|.+++.++.+.++++|+.|+|++|++++. +|..+..+++|+.|
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 35778999999987 5677887 999999999999999999999999999999999999876 88899999999999
Q ss_pred ccccccCCCCCCccccC--CceeeeecCCC
Q 002336 490 HIENNSFVGEIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~--~~~~~~~~~n~ 517 (935)
+|++|++++.+|..+.. ....+.+.+|.
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~ 153 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 153 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCC
Confidence 99999999888876654 34455666663
No 400
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.95 E-value=1e-05 Score=90.13 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=56.3
Q ss_pred ccc-cccccEEEEEEEEC-------CCcEEEEEEccCcc---hhhhHHHHHHHHHHHhcC-C--Ccccccceeeecc---
Q 002336 619 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 681 (935)
Q Consensus 619 ~~L-G~G~fG~Vy~~~~~-------~g~~vAvK~~~~~~---~~~~~~~~~E~~iL~~L~-H--pnIv~l~g~~~~~--- 681 (935)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998764 26788999865422 001256788999998884 3 3466777777654
Q ss_pred ceEEEEEEecCCCCHHH
Q 002336 682 HQRILVYEYMHNGTLRD 698 (935)
Q Consensus 682 ~~~~lV~E~~~~gsL~~ 698 (935)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876543
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.95 E-value=5.9e-07 Score=95.81 Aligned_cols=78 Identities=22% Similarity=0.362 Sum_probs=66.3
Q ss_pred CCcEEEEEccCCCCcc--cCCccccCcccccccccccccCCCCCCCccccc--cccccccccccccCCCCC-------cc
Q 002336 412 PPRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLPDMSRLI--DLRIVHLENNELTGSLPS-------YM 480 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g--~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~--~L~~L~L~~N~l~g~iP~-------~l 480 (935)
.++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. .++..+. +|+.|+|++|.+++.+|+ .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 5689999999999998 6778889999999999999999986 4344444 999999999999998884 26
Q ss_pred Cccccccccc
Q 002336 481 GSLPNLQELH 490 (935)
Q Consensus 481 ~~l~~L~~L~ 490 (935)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 7788888876
No 402
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.92 E-value=9.5e-06 Score=90.30 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=58.7
Q ss_pred cEEEEEccC-CCCcccCCccccCcc-cccccccccccCCCCCCCccccccccccccccccccCCCCC-ccCccccccccc
Q 002336 414 RITKIALSG-KNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 490 (935)
Q Consensus 414 ~l~~L~Ls~-n~l~g~ip~~i~~L~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~L~ 490 (935)
++..|++.+ +++....+..|..+. .|+.|+|++|+|+...+......+|+.|+|++|+..+.||. .+..+++|+.|+
T Consensus 129 ~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~Ld 208 (350)
T 4ay9_X 129 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 208 (350)
T ss_dssp SCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEE
T ss_pred hhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhh
Confidence 455666644 344422233455553 46667777777766655555566677777765333335654 356677777777
Q ss_pred cccccCCCCCCccccCCceeeeecCC
Q 002336 491 IENNSFVGEIPPALLTGKVIFKYDNN 516 (935)
Q Consensus 491 l~~N~l~g~iP~~l~~~~~~~~~~~n 516 (935)
|++|+|+ .||...+.....+...++
T Consensus 209 Ls~N~l~-~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 209 ISRTRIH-SLPSYGLENLKKLRARST 233 (350)
T ss_dssp CTTSCCC-CCCSSSCTTCCEEECTTC
T ss_pred cCCCCcC-ccChhhhccchHhhhccC
Confidence 7777776 666655554444444333
No 403
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.89 E-value=1.1e-06 Score=98.37 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=84.2
Q ss_pred EEEccCCCCcccCCccccCcccccccccccccCCCCCC-----Cccccc-cccccccccccccCCCCCccCcc-----cc
Q 002336 417 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-----DMSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 485 (935)
Q Consensus 417 ~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~-~L~~L~L~~N~l~g~iP~~l~~l-----~~ 485 (935)
.++|++|+++|.+|..+...++|++|+|++|.|++..+ .+.+++ +|+.|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999988888889999999999999876 367788 89999999999998888888876 99
Q ss_pred ccccccccccCCCCCCccccC-------CceeeeecCCC
Q 002336 486 LQELHIENNSFVGEIPPALLT-------GKVIFKYDNNP 517 (935)
Q Consensus 486 L~~L~l~~N~l~g~iP~~l~~-------~~~~~~~~~n~ 517 (935)
|+.|+|++|++++..+..+.. ....+.+++|.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 120 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND 120 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc
Confidence 999999999999766654332 34455666665
No 404
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.66 E-value=1.5e-06 Score=100.17 Aligned_cols=105 Identities=18% Similarity=0.211 Sum_probs=57.6
Q ss_pred CcEEEEEccCCCCcccCCccccCc-----ccccccccccccCCCC----CC-CccccccccccccccccccCCCCCccCc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMGS 482 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L-----~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~ 482 (935)
++|+.|+|++|.+.+..+..+... ++|+.|+|++|.+++. ++ .+..+++|+.|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 456666666666654433333322 4666666666666654 22 3455566666666666666444443332
Q ss_pred -----cccccccccccccCCC----CCCccccC--CceeeeecCCC
Q 002336 483 -----LPNLQELHIENNSFVG----EIPPALLT--GKVIFKYDNNP 517 (935)
Q Consensus 483 -----l~~L~~L~l~~N~l~g----~iP~~l~~--~~~~~~~~~n~ 517 (935)
+++|+.|+|++|++++ .+|..+.. ....+.+.+|+
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 4566666666666664 45554432 33344555554
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.64 E-value=8.7e-07 Score=102.18 Aligned_cols=90 Identities=21% Similarity=0.197 Sum_probs=62.1
Q ss_pred CcEEEEEccCCCCccc----CCccccCcccccccccccccCCCCCC-Ccc-----ccccccccccccccccCC----CCC
Q 002336 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-DMS-----RLIDLRIVHLENNELTGS----LPS 478 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~-----~l~~L~~L~L~~N~l~g~----iP~ 478 (935)
++|+.|+|++|++++. ++..+.++++|++|+|++|.+++..+ .+. ..++|+.|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4677788888877754 66667777788888888887765433 222 235788888888887755 556
Q ss_pred ccCccccccccccccccCCCCCCc
Q 002336 479 YMGSLPNLQELHIENNSFVGEIPP 502 (935)
Q Consensus 479 ~l~~l~~L~~L~l~~N~l~g~iP~ 502 (935)
.+..+++|+.|+|++|++++..+.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HHhhCCCccEEEccCCccccccHH
Confidence 666778888888888877744443
No 406
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.59 E-value=0.00014 Score=82.30 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=49.4
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCcch-------hhhHHHHHHHHHHHhcCC--Cccc-ccceeeeccceEEE
Q 002336 618 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RNLV-PLIGYCEEEHQRIL 686 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~~E~~iL~~L~H--pnIv-~l~g~~~~~~~~~l 686 (935)
.+.||.|..+.||++... +++.++||....... .....+..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357999999999999764 478899998653221 123456789999988742 3333 44443 3345689
Q ss_pred EEEecCCC
Q 002336 687 VYEYMHNG 694 (935)
Q Consensus 687 V~E~~~~g 694 (935)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 407
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.54 E-value=0.00017 Score=79.22 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=79.3
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-----CCcccccc-e--eeeccceEEEEEEe
Q 002336 619 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLI-G--YCEEEHQRILVYEY 690 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-----HpnIv~l~-g--~~~~~~~~~lV~E~ 690 (935)
+.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.|. .|.++... | +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677899999987655 5899988652 133445566665553 23333311 1 12345667899999
Q ss_pred cCCCCHH--------------HHhccC---CC-C-------CCCCHHHH-------------------------------
Q 002336 691 MHNGTLR--------------DRLHGS---VN-Q-------KPLDWLTR------------------------------- 714 (935)
Q Consensus 691 ~~~gsL~--------------~~L~~~---~~-~-------~~l~~~~~------------------------------- 714 (935)
++|..+. ..++.. .. . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986431 011110 00 0 01122211
Q ss_pred HHHHHHHHHHhHHhhh----------cCCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 715 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 715 ~~i~~qia~gL~yLHs----------~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
..+..++.+++.+|+. .....++|||+++.|||++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 124789999999999999888889999999764
No 408
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=5.5e-05 Score=83.22 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=76.4
Q ss_pred CcEEEEEccCCCCcccCC-ccccCcccccccccccccCCCCCC-Ccccccccc-ccccccccccCCCCCccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip-~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~-~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
++|+.|+|++|+++ .|| ..|.++++|+.|+|++| +....+ .|.++.+|+ .|+|.+ +++-.-+..|.+|++|+.|
T Consensus 226 ~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 226 PNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred CCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 47999999999999 555 57999999999999998 666555 699999999 999998 7773334679999999999
Q ss_pred ccccccCCCCCCccccC
Q 002336 490 HIENNSFVGEIPPALLT 506 (935)
Q Consensus 490 ~l~~N~l~g~iP~~l~~ 506 (935)
++++|+++ .|+...+.
T Consensus 303 ~l~~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFG 318 (329)
T ss_dssp EECSSCCC-EECTTTTC
T ss_pred EeCCCccC-ccchhhhc
Confidence 99999999 88886654
No 409
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.35 E-value=0.00057 Score=73.51 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=54.0
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCC---cccccceeeeccceEEEEEEecCCC
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 694 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hp---nIv~l~g~~~~~~~~~lV~E~~~~g 694 (935)
.+.+|.|..+.||+.+..+|+.+++|+-..........|..|+..|+.|.-. -+.+++++. ..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeeccc
Confidence 3568999999999999999999999986544333345688999999988421 233444432 237899999876
Q ss_pred C
Q 002336 695 T 695 (935)
Q Consensus 695 s 695 (935)
.
T Consensus 96 ~ 96 (288)
T 3f7w_A 96 P 96 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 410
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.34 E-value=8e-06 Score=91.84 Aligned_cols=84 Identities=23% Similarity=0.214 Sum_probs=58.8
Q ss_pred cEEEEEccCCCCcc----cCCccccCcccccccccccccCCCCC----C-CccccccccccccccccccC----CCCCcc
Q 002336 414 RITKIALSGKNLKG----EIPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTG----SLPSYM 480 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g----~ip~~i~~L~~L~~L~Ls~N~l~g~~----p-~~~~l~~L~~L~L~~N~l~g----~iP~~l 480 (935)
+|+.|+|++|+|+. .++..+..+++|++|+|++|.|+..- + .+...++|+.|+|++|+++. .++..+
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 67888888888764 24455567778888888888876532 2 35566778888888888764 234445
Q ss_pred CccccccccccccccCC
Q 002336 481 GSLPNLQELHIENNSFV 497 (935)
Q Consensus 481 ~~l~~L~~L~l~~N~l~ 497 (935)
..+++|+.|+|++|.|+
T Consensus 236 ~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 236 REHPSLELLHLYFNELS 252 (372)
T ss_dssp HHCSSCCEEECTTSSCC
T ss_pred HhCCCCCEEeccCCCCC
Confidence 55677888888888876
No 411
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.32 E-value=0.00025 Score=80.93 Aligned_cols=80 Identities=11% Similarity=0.105 Sum_probs=49.0
Q ss_pred CCceEecCCCCCCccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCC---CCCchhHHHHHHHHHHHH
Q 002336 733 NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLEL 809 (935)
Q Consensus 733 ~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~s~ksDVwS~Gvil~eL 809 (935)
...++|||+++.|||++.++ ++++||+.+.......+.......-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 47899999999999998776 99999998865432211110000001345665544311 112345666788888887
Q ss_pred HhCC
Q 002336 810 ISGK 813 (935)
Q Consensus 810 ltG~ 813 (935)
+.++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 412
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.29 E-value=0.00062 Score=74.29 Aligned_cols=137 Identities=18% Similarity=0.219 Sum_probs=90.5
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC---CCcccccceeeeccceEEEEEEecCCCC
Q 002336 619 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 695 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~---HpnIv~l~g~~~~~~~~~lV~E~~~~gs 695 (935)
+.|+.|....+|+.... ++.+++|+.... ....+..|+..|+.|. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46899999999998864 778899986532 3467889999999884 3567888888877788999999999875
Q ss_pred HH--------H---HhccCCC-C------------------CCCCHHHHH---HHH----------------HHHHHHh-
Q 002336 696 LR--------D---RLHGSVN-Q------------------KPLDWLTRL---QIA----------------HDAAKGL- 725 (935)
Q Consensus 696 L~--------~---~L~~~~~-~------------------~~l~~~~~~---~i~----------------~qia~gL- 725 (935)
+. . .|+.... . -.-+|.... ++. .++++.+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 41 1 1222111 0 012344321 111 1111111
Q ss_pred HHhhh-cCCCceEecCCCCCCccccCCCcEEEeecc
Q 002336 726 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 760 (935)
Q Consensus 726 ~yLHs-~~~~~ivH~DLkp~NILld~~~~vkL~DFG 760 (935)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1247899999999999999887 8899974
No 413
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.13 E-value=2.6e-05 Score=87.58 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=38.1
Q ss_pred cEEEEEccCCCCcccCCccc-cCcccccccccccccCCCCCC-Cc-----cccccccccccccccccC----CCCCccCc
Q 002336 414 RITKIALSGKNLKGEIPPEL-KNMEALTELWLDGNFLTGPLP-DM-----SRLIDLRIVHLENNELTG----SLPSYMGS 482 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i-~~L~~L~~L~Ls~N~l~g~~p-~~-----~~l~~L~~L~L~~N~l~g----~iP~~l~~ 482 (935)
+|+.|+|++|+|+..-...+ ..|++|+.|+|++|.|+.... .+ ...++|+.|+|++|+|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 45555555555543322222 224455555555555543222 11 123445555555555542 12333344
Q ss_pred cccccccccccccCC
Q 002336 483 LPNLQELHIENNSFV 497 (935)
Q Consensus 483 l~~L~~L~l~~N~l~ 497 (935)
+++|+.|+|++|.|+
T Consensus 182 ~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 182 NTSVTHLSLLHTGLG 196 (372)
T ss_dssp CSSCCEEECTTSSCH
T ss_pred CCCcCEEeCCCCCCC
Confidence 455555555555554
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.92 E-value=4.9e-05 Score=76.45 Aligned_cols=85 Identities=21% Similarity=0.289 Sum_probs=63.4
Q ss_pred CcEEEEEccCC-CCccc----CCccccCcccccccccccccCCCCC----C-CccccccccccccccccccCC----CCC
Q 002336 413 PRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTGS----LPS 478 (935)
Q Consensus 413 ~~l~~L~Ls~n-~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~~----p-~~~~l~~L~~L~L~~N~l~g~----iP~ 478 (935)
+.|++|+|++| ++... +...+...++|++|+|++|.|...- . .+...+.|+.|+|++|++... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47888999988 77642 4455677788999999999886421 1 245567889999999988743 456
Q ss_pred ccCcccccccccc--ccccCC
Q 002336 479 YMGSLPNLQELHI--ENNSFV 497 (935)
Q Consensus 479 ~l~~l~~L~~L~l--~~N~l~ 497 (935)
.+...++|+.|+| ++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCC
T ss_pred HHHhCCCceEEEecCCCCCCC
Confidence 6777788999999 778887
No 415
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.79 E-value=6.5e-05 Score=89.38 Aligned_cols=65 Identities=20% Similarity=0.131 Sum_probs=28.7
Q ss_pred ccCcccccccccccc--cCCCCCC-Ccc-ccccccccccccccccC-CCCCccCccccccccccccccCC
Q 002336 433 LKNMEALTELWLDGN--FLTGPLP-DMS-RLIDLRIVHLENNELTG-SLPSYMGSLPNLQELHIENNSFV 497 (935)
Q Consensus 433 i~~L~~L~~L~Ls~N--~l~g~~p-~~~-~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~ 497 (935)
+.++++|+.|+|+++ .+++..+ .+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.|+
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 444555555555421 2333222 222 24445555555555543 23333344455555555555544
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.71 E-value=5.8e-05 Score=75.89 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=67.7
Q ss_pred CcEEEEEccCCCCccc----CCccccCcccccccccccccCCCC----CC-Ccccccccccccc--ccccccCC----CC
Q 002336 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHL--ENNELTGS----LP 477 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L--~~N~l~g~----iP 477 (935)
+.|+.|+|++|+|... +...+...++|++|+|++|.|+.. +. .+...+.|+.|+| ++|.+... +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 4799999999999753 445566678999999999999864 22 5677889999999 88998744 34
Q ss_pred CccCccccccccccccccCC
Q 002336 478 SYMGSLPNLQELHIENNSFV 497 (935)
Q Consensus 478 ~~l~~l~~L~~L~l~~N~l~ 497 (935)
..+...++|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 45566689999999999986
No 417
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.70 E-value=0.003 Score=68.29 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=75.5
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcc-cccceeeeccceEEEEEEec-CCCC
Q 002336 618 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGT 695 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnI-v~l~g~~~~~~~~~lV~E~~-~~gs 695 (935)
.+.|+.|....+|+. +.+++|+..... .......+|+.+++.+...++ .++++++. +.-++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 467889999999998 568888875431 112234568888887753233 35555443 3347899999 5544
Q ss_pred HHH------------------HhccCCC--CCCCC-HHHHHHHHHH--------------HHHHhH----Hhh-hcCCCc
Q 002336 696 LRD------------------RLHGSVN--QKPLD-WLTRLQIAHD--------------AAKGLE----YLH-TGCNPG 735 (935)
Q Consensus 696 L~~------------------~L~~~~~--~~~l~-~~~~~~i~~q--------------ia~gL~----yLH-s~~~~~ 735 (935)
+.. .++.... ....+ +.....+... +.+.+. .|. ......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 321 1111100 00011 1111111110 111111 111 012356
Q ss_pred eEecCCCCCCccccCCCcEEEeecccccc
Q 002336 736 IIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 736 ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
++|+|+.+.||+ ..++.+.|+||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 999999999999 6667789999987754
No 418
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.67 E-value=0.0058 Score=66.93 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=73.9
Q ss_pred ccccccccEE-EEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCC--CcccccceeeeccceEEEEEEecCCCC
Q 002336 619 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEYMHNGT 695 (935)
Q Consensus 619 ~~LG~G~fG~-Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~H--pnIv~l~g~~~~~~~~~lV~E~~~~gs 695 (935)
+.|+.|.... +|+....+|+.+++|...... ...+..|+.+++.+.. -.+.+++.+..+.+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 567765447778887654321 1345567777777742 23455666543333 78999997766
Q ss_pred HHHHhccC---------------------CC--CCCCCHHHHH-------HH-------------HHHHHHHhHHhh---
Q 002336 696 LRDRLHGS---------------------VN--QKPLDWLTRL-------QI-------------AHDAAKGLEYLH--- 729 (935)
Q Consensus 696 L~~~L~~~---------------------~~--~~~l~~~~~~-------~i-------------~~qia~gL~yLH--- 729 (935)
+.+.+... .. ...++..... .+ ...+.+.+..|.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65433211 00 0111111100 00 001111222221
Q ss_pred hcCCCceEecCCCCCCccccCC----CcEEEeeccccccc
Q 002336 730 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 765 (935)
Q Consensus 730 s~~~~~ivH~DLkp~NILld~~----~~vkL~DFGla~~~ 765 (935)
......++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1124689999999999999875 67999999987643
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.64 E-value=0.0029 Score=72.25 Aligned_cols=71 Identities=15% Similarity=0.309 Sum_probs=49.3
Q ss_pred ccccccccEEEEEEEECC--------CcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcc-cccceeeeccceEEEEEE
Q 002336 619 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnI-v~l~g~~~~~~~~~lV~E 689 (935)
+.|+.|....+|+....+ ++.+++|+...... ...+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 467889999999998753 57899998743211 1455679999998853333 556666543 38999
Q ss_pred ecCCCC
Q 002336 690 YMHNGT 695 (935)
Q Consensus 690 ~~~~gs 695 (935)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998643
No 420
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.55 E-value=0.01 Score=64.55 Aligned_cols=142 Identities=15% Similarity=0.213 Sum_probs=79.1
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCc--cccccee------eeccceEEEEEEe
Q 002336 619 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEY 690 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hpn--Iv~l~g~------~~~~~~~~lV~E~ 690 (935)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+.... +.+++.. ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999987755 6888987652 12345667888887774212 2333321 1223567899999
Q ss_pred cCCCCHHH--------------HhccC---CCCC---CC---CHHHHHHH------------HHHHHHHhHHhhhc----
Q 002336 691 MHNGTLRD--------------RLHGS---VNQK---PL---DWLTRLQI------------AHDAAKGLEYLHTG---- 731 (935)
Q Consensus 691 ~~~gsL~~--------------~L~~~---~~~~---~l---~~~~~~~i------------~~qia~gL~yLHs~---- 731 (935)
++|..+.. .++.. .... .. .|.....- ...+.+.++.+++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98864311 11110 0000 01 12221100 01133444455421
Q ss_pred CCCceEecCCCCCCccccCCCcEEEeeccccc
Q 002336 732 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 763 (935)
Q Consensus 732 ~~~~ivH~DLkp~NILld~~~~vkL~DFGla~ 763 (935)
...+++|+|+++.|||++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23689999999999999987666899998764
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.51 E-value=0.012 Score=64.17 Aligned_cols=141 Identities=12% Similarity=0.167 Sum_probs=80.9
Q ss_pred cccccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcCCC--ccccccee-----eeccceEEEEEEecC
Q 002336 620 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR--NLVPLIGY-----CEEEHQRILVYEYMH 692 (935)
Q Consensus 620 ~LG~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hp--nIv~l~g~-----~~~~~~~~lV~E~~~ 692 (935)
.++ |....||+....+|+.+++|...... .....+..|..+++.+... .+.+++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77889999887778889999986331 1234667788888877422 23444443 122445678999998
Q ss_pred CCCHH-----H------H---hcc----CC--CCCCCCHHHH----------------------HHHHHHHHHHhHHhhh
Q 002336 693 NGTLR-----D------R---LHG----SV--NQKPLDWLTR----------------------LQIAHDAAKGLEYLHT 730 (935)
Q Consensus 693 ~gsL~-----~------~---L~~----~~--~~~~l~~~~~----------------------~~i~~qia~gL~yLHs 730 (935)
|..+. . . ++. .. .....++... ...+.++++.+.-+-.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75431 0 0 111 00 0111222111 1111122222221110
Q ss_pred -cCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 731 -GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 731 -~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
.....++|||+++.|||++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1246789999999999999 4 899999987653
No 422
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.0075 Score=69.31 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=48.0
Q ss_pred ccccccccEEEEEEEECC-CcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCcc-cccceeeeccceEEEEEEecCCCCH
Q 002336 619 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGTL 696 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~HpnI-v~l~g~~~~~~~~~lV~E~~~~gsL 696 (935)
+.|+.|....+|+....+ ++.+++|+...... ..-.-..|..+++.|...++ .++++.+.. .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 568889999999998875 57889998643221 11122589999999965444 456666632 359999987443
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.38 E-value=0.00015 Score=86.26 Aligned_cols=106 Identities=14% Similarity=0.112 Sum_probs=64.0
Q ss_pred CCcEEEEEcc--C----CCCcc-----cCCccccCcccccccccccccCCCCCC-Cccc-cccccccccccccccCCCCC
Q 002336 412 PPRITKIALS--G----KNLKG-----EIPPELKNMEALTELWLDGNFLTGPLP-DMSR-LIDLRIVHLENNELTGSLPS 478 (935)
Q Consensus 412 ~~~l~~L~Ls--~----n~l~g-----~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~-l~~L~~L~L~~N~l~g~iP~ 478 (935)
.++|+.|+|+ + +++++ .++..+.++++|+.|+|++ .++...+ .+.. +++|+.|+|++|.+++..+.
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 3577888887 3 45541 1222356677888888866 4444322 4444 77788888888887655554
Q ss_pred cc-CccccccccccccccCCCCCCccccC---CceeeeecCCCC
Q 002336 479 YM-GSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 518 (935)
Q Consensus 479 ~l-~~l~~L~~L~l~~N~l~g~iP~~l~~---~~~~~~~~~n~~ 518 (935)
.+ ..+++|+.|+|++|.+++..+..+.. ....+.+.+|+.
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 44 56788888888888875433332222 334455555543
No 424
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.36 E-value=0.0075 Score=67.53 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=84.4
Q ss_pred ccccccccEEEEEEEEC--------CCcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeeccceEEEEEE
Q 002336 619 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 689 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~~~~lV~E 689 (935)
+.|..|....+|+.... +++.+++|+.... ........+|.++++.|. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888889998875 3578999986332 223455668999998884 3323556666654 29999
Q ss_pred ecCCCCHHH-----------------HhccCC--CCCCCC--HHHHHHHHHHHHH-------------------HhHHhh
Q 002336 690 YMHNGTLRD-----------------RLHGSV--NQKPLD--WLTRLQIAHDAAK-------------------GLEYLH 729 (935)
Q Consensus 690 ~~~~gsL~~-----------------~L~~~~--~~~~l~--~~~~~~i~~qia~-------------------gL~yLH 729 (935)
|++|..|.. .|+... ..+... +.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998755421 112111 112222 4555556554432 123332
Q ss_pred h-----cCCCceEecCCCCCCccccCC----CcEEEeecccccc
Q 002336 730 T-----GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 764 (935)
Q Consensus 730 s-----~~~~~ivH~DLkp~NILld~~----~~vkL~DFGla~~ 764 (935)
+ .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 124579999999999999876 7899999987753
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.31 E-value=0.00035 Score=69.32 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=64.8
Q ss_pred CcEEEEEccCCCCcccCCccccCccccccccccccc-CCCC-CCCcccc----cccccccccccc-ccCCCCCccCcccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGP-LPDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPN 485 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~-l~g~-~p~~~~l----~~L~~L~L~~N~-l~g~iP~~l~~l~~ 485 (935)
.+|++|||+++.++..--..+.++++|+.|+|+++. ++.. +..++.+ ++|+.|+|++|. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544568899999999999995 5542 2345554 479999999985 65332235778999
Q ss_pred cccccccccc-CC
Q 002336 486 LQELHIENNS-FV 497 (935)
Q Consensus 486 L~~L~l~~N~-l~ 497 (935)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999886 44
No 426
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.26 E-value=0.00086 Score=79.56 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=13.8
Q ss_pred ccccccccccccccccCCCCCccCccccccccccc
Q 002336 458 RLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 492 (935)
Q Consensus 458 ~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 492 (935)
++++|+.|+|++|.+.+ +|..++++++|+.|+++
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 34444444444444442 33333333344443333
No 427
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.19 E-value=0.0065 Score=67.68 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=44.5
Q ss_pred ccccccccEEEEEEEECC---------CcEEEEEEccCcchhhhHHHHHHHHHHHhcCCCc-ccccceeeeccceEEEEE
Q 002336 619 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~Hpn-Iv~l~g~~~~~~~~~lV~ 688 (935)
+.|+.|....+|+....+ ++.+++|+..... ........|.++++.+...+ ..++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 467888889999998764 2689999865432 22223467888888885333 335555442 26899
Q ss_pred EecCCCC
Q 002336 689 EYMHNGT 695 (935)
Q Consensus 689 E~~~~gs 695 (935)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.11 E-value=0.0035 Score=58.96 Aligned_cols=55 Identities=31% Similarity=0.383 Sum_probs=36.5
Q ss_pred EEEccCCCCc-ccCCccccCcccccccccccccCCCCCC-Ccccccccccccccccccc
Q 002336 417 KIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELT 473 (935)
Q Consensus 417 ~L~Ls~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~ 473 (935)
.++.++++|+ ..+|..|. .+|+.|+|++|+|+...+ .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6788888886 46665432 357777777777776665 3566666777666666554
No 429
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.04 E-value=0.00043 Score=82.14 Aligned_cols=83 Identities=12% Similarity=0.188 Sum_probs=60.2
Q ss_pred CcEEEEEccCCCCcccCCcccc-Ccccccccccccc-cCCCC-CCCc-cccccccccccccccccCCCCCccC----ccc
Q 002336 413 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGN-FLTGP-LPDM-SRLIDLRIVHLENNELTGSLPSYMG----SLP 484 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~-~L~~L~~L~Ls~N-~l~g~-~p~~-~~l~~L~~L~L~~N~l~g~iP~~l~----~l~ 484 (935)
++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++.+ .++++|+.|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788888888888877777775 6788888888888 44432 4443 4688888888888887765544333 566
Q ss_pred ccccccccccc
Q 002336 485 NLQELHIENNS 495 (935)
Q Consensus 485 ~L~~L~l~~N~ 495 (935)
+|+.|+|++|.
T Consensus 185 ~L~~L~l~~~~ 195 (594)
T 2p1m_B 185 SLVSLNISCLA 195 (594)
T ss_dssp CCCEEECTTCC
T ss_pred cCcEEEecccC
Confidence 88888888886
No 430
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.85 E-value=0.026 Score=62.10 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=44.5
Q ss_pred cccccEEEEEEEECCCcEEEEEEccCcchhhhHHHHHHHHHHHhcC---CCccccccee------eeccceEEEEEEecC
Q 002336 622 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGY------CEEEHQRILVYEYMH 692 (935)
Q Consensus 622 G~G~fG~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~---HpnIv~l~g~------~~~~~~~~lV~E~~~ 692 (935)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|.+.+++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444689999988777 899998765331 35666666663 2224455432 234567899999999
Q ss_pred CCCH
Q 002336 693 NGTL 696 (935)
Q Consensus 693 ~gsL 696 (935)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8755
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.82 E-value=0.00099 Score=74.29 Aligned_cols=86 Identities=15% Similarity=0.272 Sum_probs=51.2
Q ss_pred CcEEEEEccCCCCcccCCcccc--Cccccccccccc--ccCCCC--C----CCc--cccccccccccccccccCCCCCcc
Q 002336 413 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP--L----PDM--SRLIDLRIVHLENNELTGSLPSYM 480 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~--~L~~L~~L~Ls~--N~l~g~--~----p~~--~~l~~L~~L~L~~N~l~g~iP~~l 480 (935)
++|+.|+|..+++....-..++ +|++|+.|+|+. |...|. + +.+ ..+++|++|+|.+|.+....+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4677777777776544434443 677777777753 222221 1 112 246777888887777764433333
Q ss_pred ---CccccccccccccccCCC
Q 002336 481 ---GSLPNLQELHIENNSFVG 498 (935)
Q Consensus 481 ---~~l~~L~~L~l~~N~l~g 498 (935)
..+++|+.|+|+.|.|.+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBH
T ss_pred HhCccCCCCCEEECCCCCCCh
Confidence 246777888887777764
No 432
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.79 E-value=0.057 Score=54.92 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=69.1
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCCccccCCCcEEEeecccccccccccccee
Q 002336 694 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 773 (935)
Q Consensus 694 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 773 (935)
-+|.++|... +.++++.+++.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.+...+ ..+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3799999863 67899999999999999998776210 1111334456888899999888764 1110
Q ss_pred ecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002336 774 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 816 (935)
Q Consensus 774 ~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf 816 (935)
.....+.+||... ...+.+.=|||+|+++|.-+--..|-
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1123467888764 45678999999999999998765553
No 433
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=95.43 E-value=0.0067 Score=66.34 Aligned_cols=77 Identities=19% Similarity=0.055 Sum_probs=64.4
Q ss_pred CcEEEEEccCCCCcccCCccccCccccc-ccccccccCCCCCC-CccccccccccccccccccCCCCCccCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALT-ELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~-~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 490 (935)
.+|++|+|++| +...-+..|.++++|+ .|+|.+ +++...+ .|.++++|+.|+|++|+++..-+..|.+|++|+.|+
T Consensus 250 ~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 250 KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 47999999998 7744445799999999 999999 7776666 699999999999999999944445799999999886
Q ss_pred c
Q 002336 491 I 491 (935)
Q Consensus 491 l 491 (935)
.
T Consensus 328 ~ 328 (329)
T 3sb4_A 328 K 328 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 434
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.38 E-value=0.034 Score=62.50 Aligned_cols=141 Identities=18% Similarity=0.211 Sum_probs=83.4
Q ss_pred ccccccccEEEEEEEECC--------CcEEEEEEccCcchh------------------hhHHHHHHHHHHHhcC-CCcc
Q 002336 619 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH------------------RTQQFVTEVALLSRIH-HRNL 671 (935)
Q Consensus 619 ~~LG~G~fG~Vy~~~~~~--------g~~vAvK~~~~~~~~------------------~~~~~~~E~~iL~~L~-HpnI 671 (935)
+.|..|-...+|+....+ ++.+.+++.-..... +......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678889999988764 367888886432110 0112345888988885 4345
Q ss_pred cccceeeeccceEEEEEEecCCCCHHH--H---------------hccCC--CCCCCC--HHHHHHHHHHHHH-------
Q 002336 672 VPLIGYCEEEHQRILVYEYMHNGTLRD--R---------------LHGSV--NQKPLD--WLTRLQIAHDAAK------- 723 (935)
Q Consensus 672 v~l~g~~~~~~~~~lV~E~~~~gsL~~--~---------------L~~~~--~~~~l~--~~~~~~i~~qia~------- 723 (935)
.++++++..+ +|+||++|-+|.. + ++... ..+... +..+.++..++..
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5667776532 8999998754411 1 11111 112222 3344444433321
Q ss_pred ---------------HhH----Hhhh-cCCCceEecCCCCCCccccCC------CcEEEeeccccc
Q 002336 724 ---------------GLE----YLHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSR 763 (935)
Q Consensus 724 ---------------gL~----yLHs-~~~~~ivH~DLkp~NILld~~------~~vkL~DFGla~ 763 (935)
-+. +|.. .....++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 122 2221 124579999999999999876 789999998764
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.28 E-value=0.011 Score=55.62 Aligned_cols=53 Identities=30% Similarity=0.468 Sum_probs=31.9
Q ss_pred ccccccccCC-CCCC-CccccccccccccccccccCCCCC-ccCccccccccccccccC
Q 002336 441 ELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSF 496 (935)
Q Consensus 441 ~L~Ls~N~l~-g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~L~l~~N~l 496 (935)
.++.+++.|+ ..+| .+. .+|+.|+|++|+|+ .||. .|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 6777777776 2333 332 24777777777777 4444 456666666665554444
No 436
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.12 E-value=0.0022 Score=71.43 Aligned_cols=86 Identities=20% Similarity=0.195 Sum_probs=49.8
Q ss_pred CCcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-Cc--ccccccccccccc--ccccCC-----CCCcc-
Q 002336 412 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DM--SRLIDLRIVHLEN--NELTGS-----LPSYM- 480 (935)
Q Consensus 412 ~~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~--~~l~~L~~L~L~~--N~l~g~-----iP~~l- 480 (935)
.|+|++|+|++|.-. .+++ + .+++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 457888888776311 3443 3 37788888887776543221 23 3677888887753 222221 11112
Q ss_pred -CccccccccccccccCCCCC
Q 002336 481 -GSLPNLQELHIENNSFVGEI 500 (935)
Q Consensus 481 -~~l~~L~~L~l~~N~l~g~i 500 (935)
+.+++|+.|+|.+|.+....
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHH
T ss_pred cCCCCCcCEEeCCCCCCchHH
Confidence 34678888888888776433
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=93.83 E-value=0.042 Score=62.00 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=34.0
Q ss_pred EEEEEccCCCCcccCCccccCcccccccccccccCCC----CCC--CccccccccccccccccccCCCCC-ccCcccccc
Q 002336 415 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG----PLP--DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQ 487 (935)
Q Consensus 415 l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g----~~p--~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~ 487 (935)
|+.|.| .++++-.-+..|.++++|+.|+|.+|.+.. .++ .|.++++|+.|+|. |+++ .|+. .|.+|++|+
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVT 326 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCC
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCcc
Confidence 444444 233442223345555555555555554431 122 34555555555555 2344 3332 344555555
Q ss_pred ccccc
Q 002336 488 ELHIE 492 (935)
Q Consensus 488 ~L~l~ 492 (935)
.|.|.
T Consensus 327 ~l~lp 331 (401)
T 4fdw_A 327 QLTIP 331 (401)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55553
No 438
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.82 E-value=0.13 Score=58.37 Aligned_cols=141 Identities=13% Similarity=0.190 Sum_probs=85.2
Q ss_pred cccccccccEEEEEEEECC--------CcEEEEEEccCcchhhhHHHHHHHHHHHhcC-CCcccccceeeeccceEEEEE
Q 002336 618 CKKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVY 688 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~iL~~L~-HpnIv~l~g~~~~~~~~~lV~ 688 (935)
.+.+..|-...+|+....+ ++.+++|+..... ...-...+|.++++.+. +.-..++++.+. -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788889999998763 5789999864322 22223467888888885 322344555332 27899
Q ss_pred EecCCCCHHH--------------H---hccC-------C---CCCCCCHHHHHHHHHHHH-------------------
Q 002336 689 EYMHNGTLRD--------------R---LHGS-------V---NQKPLDWLTRLQIAHDAA------------------- 722 (935)
Q Consensus 689 E~~~~gsL~~--------------~---L~~~-------~---~~~~l~~~~~~~i~~qia------------------- 722 (935)
||++|..|.. . |+.. . ...+.-+.++.++..++-
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865311 0 1100 0 111122444444443322
Q ss_pred HHhHHhhh---------------------cCCCceEecCCCCCCccccCCCcEEEeecccccc
Q 002336 723 KGLEYLHT---------------------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 764 (935)
Q Consensus 723 ~gL~yLHs---------------------~~~~~ivH~DLkp~NILld~~~~vkL~DFGla~~ 764 (935)
+.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22233321 11357999999999999 8888999999988753
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=93.28 E-value=0.05 Score=61.37 Aligned_cols=88 Identities=11% Similarity=0.139 Sum_probs=66.9
Q ss_pred CcEEEEEccCCCCc-----ccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCC-CccCcccc
Q 002336 413 PRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPN 485 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~-----g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~ 485 (935)
.+|+.|+|.+|.+. -.-+..|.++++|+.|+|.+ +++.... .|.++++|+.|+|.+| ++ .|+ ..|.+| +
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~ 346 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-G 346 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-C
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-C
Confidence 47889999888765 23345788999999999994 4665544 6889999999999665 66 454 568888 9
Q ss_pred ccccccccccCCCCCCcccc
Q 002336 486 LQELHIENNSFVGEIPPALL 505 (935)
Q Consensus 486 L~~L~l~~N~l~g~iP~~l~ 505 (935)
|+.|++++|.+. .++...+
T Consensus 347 L~~l~l~~n~~~-~l~~~~F 365 (401)
T 4fdw_A 347 IKEVKVEGTTPP-QVFEKVW 365 (401)
T ss_dssp CCEEEECCSSCC-BCCCSSC
T ss_pred CCEEEEcCCCCc-ccccccc
Confidence 999999999887 5665443
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=90.75 E-value=0.025 Score=56.95 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=58.4
Q ss_pred CcEEEEEccCC-CCcc----cCCccccCcccccccccccccCCCCC--C---CccccccccccccccccccCC----CCC
Q 002336 413 PRITKIALSGK-NLKG----EIPPELKNMEALTELWLDGNFLTGPL--P---DMSRLIDLRIVHLENNELTGS----LPS 478 (935)
Q Consensus 413 ~~l~~L~Ls~n-~l~g----~ip~~i~~L~~L~~L~Ls~N~l~g~~--p---~~~~l~~L~~L~L~~N~l~g~----iP~ 478 (935)
+.|++|+|++| +|.. .|-..+..=+.|+.|+|++|.|...- . .+..-+.|+.|+|++|+|... |-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 36889999986 6643 24455666789999999999987421 1 244557799999999998733 223
Q ss_pred ccCcccccccccccccc
Q 002336 479 YMGSLPNLQELHIENNS 495 (935)
Q Consensus 479 ~l~~l~~L~~L~l~~N~ 495 (935)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 44445679999998763
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=88.02 E-value=0.058 Score=53.27 Aligned_cols=70 Identities=10% Similarity=0.125 Sum_probs=49.6
Q ss_pred cCCccccCcccccccccccccCCCC-CCCcccccccccccccccc-ccCCCCCccCcc----cccccccccccc-CC
Q 002336 428 EIPPELKNMEALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENNS-FV 497 (935)
Q Consensus 428 ~ip~~i~~L~~L~~L~Ls~N~l~g~-~p~~~~l~~L~~L~L~~N~-l~g~iP~~l~~l----~~L~~L~l~~N~-l~ 497 (935)
.+|.....--.|+.|||+++.++.. +..+.++++|+.|+|++|. ++..-=..|+.+ ++|+.|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 3454332335799999999987653 4467899999999999996 553222234443 479999999975 66
No 442
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.11 E-value=1.1 Score=50.21 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.1
Q ss_pred ceEecCCCCCCccc------cCCCcEEEeecccccc
Q 002336 735 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 764 (935)
Q Consensus 735 ~ivH~DLkp~NILl------d~~~~vkL~DFGla~~ 764 (935)
.++|+|+.+.|||+ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999988754
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=83.86 E-value=0.73 Score=50.86 Aligned_cols=87 Identities=13% Similarity=0.138 Sum_probs=58.0
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCC-ccCcccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 491 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~L~l 491 (935)
.++.+.+.+ ++.-.-...|.++++|+.+.|.+|.++.... .|.++.+|+.+.|.++ ++ .|.. .|.+|++|+.+.+
T Consensus 264 ~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 264 ALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC
T ss_pred hhccccccc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE
Confidence 466666654 3542223467788888888888887776555 5788888888888754 55 5554 5778888888877
Q ss_pred ccccCCCCCCcccc
Q 002336 492 ENNSFVGEIPPALL 505 (935)
Q Consensus 492 ~~N~l~g~iP~~l~ 505 (935)
..| ++ .|.+..+
T Consensus 341 p~~-v~-~I~~~aF 352 (379)
T 4h09_A 341 PKS-IT-LIESGAF 352 (379)
T ss_dssp CTT-CC-EECTTTT
T ss_pred CCc-cC-EEchhHh
Confidence 654 54 4554443
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=83.83 E-value=0.62 Score=51.87 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=50.9
Q ss_pred CcEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCC-ccCccccccccc
Q 002336 413 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 490 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~L~ 490 (935)
..|+.+.+.++ ++-.-...|.++++|+.++|.++ ++..-. .|.++.+|+.++|..| ++ .|++ .|.+|++|+.++
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVE 372 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEE
Confidence 35667777543 55222346777888888888644 443333 5777888888888766 55 4543 577788888887
Q ss_pred cccc
Q 002336 491 IENN 494 (935)
Q Consensus 491 l~~N 494 (935)
|..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 7654
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=82.71 E-value=0.051 Score=54.70 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=56.6
Q ss_pred CcEEEEEccCCCCccc----CCccccCcccccccccccccCCCCCC-----Cccccccccccccccccc---cC----CC
Q 002336 413 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNEL---TG----SL 476 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~L~~N~l---~g----~i 476 (935)
..|+.|+|++|+|... |...+..=+.|+.|+|++|.|...-- .+..-+.|+.|+|++|.. .. .|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 4799999999999743 23344455899999999999985321 355556799999987633 21 12
Q ss_pred CCccCccccccccccccccC
Q 002336 477 PSYMGSLPNLQELHIENNSF 496 (935)
Q Consensus 477 P~~l~~l~~L~~L~l~~N~l 496 (935)
.+.+..=+.|+.|+++.|.+
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 23344445677777765554
No 446
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=79.49 E-value=1.9 Score=47.94 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=26.3
Q ss_pred cccCcccccccccccccCCCCCC-CccccccccccccccccccCCCC-CccCccccccccccc
Q 002336 432 ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIE 492 (935)
Q Consensus 432 ~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~L~~L~l~ 492 (935)
.|.+++.|+.+.+. +.++.... .|.++.+|+.++|..| ++ .|. ..|.+|++|+.+.|.
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEEC
Confidence 44455555555553 22222222 3455555555555433 33 232 234555555555553
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.65 E-value=7.5 Score=39.24 Aligned_cols=115 Identities=12% Similarity=0.137 Sum_probs=80.1
Q ss_pred CCCcccccceeeeccceEEEEEEecCC-CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHhHHhhhcCCCceEecCCCCCC
Q 002336 667 HHRNLVPLIGYCEEEHQRILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 745 (935)
Q Consensus 667 ~HpnIv~l~g~~~~~~~~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLHs~~~~~ivH~DLkp~N 745 (935)
.||+++.. .+-.+++.+.+.++.-+. -++.. + +.++...+++++.+|+....++++ -+|--|+|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 58888866 455666666666655432 23333 2 246788999999999998877764 4899999999
Q ss_pred ccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002336 746 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 817 (935)
Q Consensus 746 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~ 817 (935)
++++.++.+++.-.|+-.. ++|. ..++..=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987664322 1222 12333334467789999999999886
No 448
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=76.34 E-value=1.5 Score=48.69 Aligned_cols=79 Identities=15% Similarity=0.295 Sum_probs=57.7
Q ss_pred CcEEEEEccCCCCcccCC-ccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCC-ccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~ip-~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~-~l~~l~~L~~L 489 (935)
..|+.+.+. +++. .|+ ..|.++++|+.++|..| ++..-. .|.++.+|+.+.|..+ ++ .|.+ .|.+|++|+.+
T Consensus 288 ~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 288 PALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEE
T ss_pred cccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEE
Confidence 367777775 4565 444 46888999999999765 443333 5888999999999755 66 5654 68889999999
Q ss_pred ccccccC
Q 002336 490 HIENNSF 496 (935)
Q Consensus 490 ~l~~N~l 496 (935)
++.+|..
T Consensus 363 ~~~~~~~ 369 (394)
T 4gt6_A 363 EYSGSRS 369 (394)
T ss_dssp EESSCHH
T ss_pred EECCcee
Confidence 9887754
No 449
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=74.82 E-value=1.9 Score=47.38 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=63.7
Q ss_pred cEEEEEccCCCCcccCCccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCC-CccCcccccccccc
Q 002336 414 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 491 (935)
Q Consensus 414 ~l~~L~Ls~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~L~~L~l 491 (935)
.|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..... .|.++.+|+.+.|.+|.++ .|+ ..|.+|.+|+.+.|
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEEC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEc
Confidence 5777777654 55333456788899999998654 443333 5888999999999999888 565 46889999999998
Q ss_pred ccccCCCCCCccccC
Q 002336 492 ENNSFVGEIPPALLT 506 (935)
Q Consensus 492 ~~N~l~g~iP~~l~~ 506 (935)
..+ ++ .|+...+.
T Consensus 318 p~~-l~-~I~~~aF~ 330 (379)
T 4h09_A 318 PTA-LK-TIQVYAFK 330 (379)
T ss_dssp CTT-CC-EECTTTTT
T ss_pred Ccc-cc-EEHHHHhh
Confidence 754 65 66665443
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=72.66 E-value=0.73 Score=34.05 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=9.8
Q ss_pred EeccchhHHHHHHHHHhhhheeeeec
Q 002336 532 ILGTSIGVLAILLVLFLCSLIVLRKL 557 (935)
Q Consensus 532 iv~~~v~~~~~lvll~~~~~~~~rr~ 557 (935)
|.+.+++.+++++++++..++++||+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 33444443333333333333334443
No 451
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=71.05 E-value=1.8 Score=48.11 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=54.9
Q ss_pred CcEEEEEccCCCCcccC-CccccCcccccccccccccCCCCCC-CccccccccccccccccccCCCCCccCcccccccc
Q 002336 413 PRITKIALSGKNLKGEI-PPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 489 (935)
Q Consensus 413 ~~l~~L~Ls~n~l~g~i-p~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L 489 (935)
.+|+.++|.++ ++ .| ...|.++++|+.++|..| ++..-. .|.++.+|+.++|..| ++ .+...+.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 47888999754 66 45 457999999999999877 554444 6999999999999865 44 455678888888764
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.41 E-value=0.55 Score=53.82 Aligned_cols=59 Identities=8% Similarity=0.086 Sum_probs=17.3
Q ss_pred cccccccccEEEEEEEECC-CcEEEE------EEccCcc--hhhhHHHHHHHHHHHhcCCCcccccceeee
Q 002336 618 CKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 679 (935)
Q Consensus 618 ~~~LG~G~fG~Vy~~~~~~-g~~vAv------K~~~~~~--~~~~~~~~~E~~iL~~L~HpnIv~l~g~~~ 679 (935)
.+.|| ||.||+|.+.. ..+||+ |..+... .+....+.+|..+++.++|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45676 99999999874 367888 7665422 223456888999999999999999988753
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.71 E-value=8.9 Score=38.86 Aligned_cols=114 Identities=12% Similarity=0.095 Sum_probs=78.4
Q ss_pred CCCcccccceeeeccceEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHhH-HhhhcCCCceEecCCCCC
Q 002336 667 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSS 744 (935)
Q Consensus 667 ~HpnIv~l~g~~~~~~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~-yLHs~~~~~ivH~DLkp~ 744 (935)
.||++ -..+-.+++.+.+.++.-+++ ++..+ + .++...+++++.+|+.... +++. -+|--|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-~------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-R------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-H------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-H------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57887 334446667777777765333 44433 2 3678899999999998877 6653 588999999
Q ss_pred CccccCCCcEEEeeccccccccccccceeecccCCccccCCCCCCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002336 745 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 817 (935)
Q Consensus 745 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDVwS~Gvil~eLltG~~Pf~ 817 (935)
|++++.++.+++.-.|+-. -++|.- .++.-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~------------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE------------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETT------------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcc------------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998766432 223332 1222233457788888998888775
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.73 E-value=0.82 Score=33.70 Aligned_cols=27 Identities=15% Similarity=0.495 Sum_probs=12.3
Q ss_pred EEEeccchhHHHHHHHHHhhhheeeee
Q 002336 530 KLILGTSIGVLAILLVLFLCSLIVLRK 556 (935)
Q Consensus 530 ~iiv~~~v~~~~~lvll~~~~~~~~rr 556 (935)
..+++.++|++.++++++...++++||
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehh
Confidence 335566666443333333334444333
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=58.74 E-value=1.9 Score=31.76 Aligned_cols=26 Identities=31% Similarity=0.364 Sum_probs=9.5
Q ss_pred EeccchhHHHHHHHHHhhhheeeeec
Q 002336 532 ILGTSIGVLAILLVLFLCSLIVLRKL 557 (935)
Q Consensus 532 iv~~~v~~~~~lvll~~~~~~~~rr~ 557 (935)
|.+.+++.+++++++.+..++++||+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 33334433333333333333333433
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=31.32 E-value=10 Score=27.01 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=12.3
Q ss_pred EEeccchhHHHHHHHHHhhhheeee
Q 002336 531 LILGTSIGVLAILLVLFLCSLIVLR 555 (935)
Q Consensus 531 iiv~~~v~~~~~lvll~~~~~~~~r 555 (935)
.|.++++++++.++++..+.++++|
T Consensus 12 aIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeeehHHHHHHHHHHHHHHHHee
Confidence 3556666665544444443333333
No 457
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=27.56 E-value=3.6e+02 Score=24.79 Aligned_cols=91 Identities=11% Similarity=0.171 Sum_probs=54.9
Q ss_pred CCcceEEeeecCCceeEEEEEeeecCCCCCCCCCeEEEEEcCceeEEEEecCCcc--ceEE-E-EEEecCCCCcccceec
Q 002336 80 NKKYCYNLITKERRRYLVRATFQYGSLGSEASYPKFQLYLDATLWSTVTVLDASR--VYAK-E-MIIRAPSDSIDVCICC 155 (935)
Q Consensus 80 ~~~~cy~l~~~~~~~ylvr~~~~yg~yd~~~~~p~fd~~~~~~~w~~v~~~~~~~--~~~~-e-~~~~~~~~~~~vcl~~ 155 (935)
|..==|++.+.+.+.|.|+..|.=|. ...-.++|+++|+.-.+|.+..+.. .+.. . -|...++. -.+=|..
T Consensus 38 G~~v~~~V~v~~aG~Y~l~~ryang~----~~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~-ntI~l~~ 112 (145)
T 2w3j_A 38 GASIVWSLSAASAKTYTAQIRFGNGG----TSARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGT-NSIKLVA 112 (145)
T ss_dssp TCEEEEEEEESSCEEEEEEEEEECCS----SSCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEE-EEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEEEEEECCC----CCCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCc-eEEEEEE
Confidence 34445677777889999988765222 2346899999998777776532211 1211 1 23333333 2344444
Q ss_pred c-CCCCceeeeeeeeecCCCC
Q 002336 156 A-VTGSPFISTLELRPLNLSM 175 (935)
Q Consensus 156 ~-~~~~pfis~le~~~l~~~~ 175 (935)
+ +.|.|-|-.|+|.+.+...
T Consensus 113 ~~~~g~~niD~i~v~~~~~~~ 133 (145)
T 2w3j_A 113 ETADGLANIDSIRVTGNGITP 133 (145)
T ss_dssp CSTTCCCEEEEEEECSTTEEE
T ss_pred ecCcCCEEEEEEEEEcCCCCC
Confidence 3 3567999999998766443
No 458
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=20.99 E-value=34 Score=21.12 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=13.8
Q ss_pred CCccCCCCCCCCcccc
Q 002336 200 DALRYPDDPYDRIWDS 215 (935)
Q Consensus 200 ~~~~y~~d~~~R~W~~ 215 (935)
...|.|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 4678999999999975
No 459
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=20.12 E-value=38 Score=21.08 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=13.9
Q ss_pred CCccCCCCCCCCcccc
Q 002336 200 DALRYPDDPYDRIWDS 215 (935)
Q Consensus 200 ~~~~y~~d~~~R~W~~ 215 (935)
...|.|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (27)
T 1nro_R 6 FLLRNPNDKYEPFWED 21 (27)
T ss_pred ccccCCCcccCccccc
Confidence 5679999999999975
Done!