Your job contains 1 sequence.
>002337
MCVCISTPFFLIQATRVFEVCIIDSMVERRKPLVLSSTKLLINSVLSSSRRVTGENLVGD
DVSPSLQLPAGILRFSKDKIDISDAKFASLDDSALLGLSTCVLKQLSVTSGSLVLVKNAE
TTKQRIAQVVVLDPPTTRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSP
LLAFNLDLHISSLKFLVHQGKEVLESLFIAKVDDGTSGQDGKASLIKLGLQSVGQLPKYA
SHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINW
NCSSMICIPCRQRLHRRSDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDL
LISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR
LGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPND
QVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTI
RRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHAL
VADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRN
ASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL
INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI
DGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL
LEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEY
DDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002337
(934 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 1729 4.5e-178 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 1018 2.0e-112 4
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 1023 4.5e-109 3
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 1023 4.5e-109 3
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 1011 1.9e-104 2
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 854 1.5e-102 2
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 990 6.6e-102 2
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 990 1.1e-101 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 993 4.4e-100 1
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 974 4.5e-98 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 963 6.6e-97 1
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 951 1.2e-95 1
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 814 1.4e-92 3
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes... 723 7.8e-91 5
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 796 4.4e-86 2
CGD|CAL0005974 - symbol:PEX6 species:5476 "Candida albica... 769 3.3e-85 3
UNIPROTKB|Q59ZE6 - symbol:PEX6 "Likely peroxisomal biogen... 769 3.3e-85 3
FB|FBgn0033564 - symbol:Pex6 "Peroxin 6" species:7227 "Dr... 742 1.3e-82 2
ASPGD|ASPL0000034610 - symbol:pexF species:162425 "Emeric... 730 4.0e-79 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 671 5.8e-66 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 666 2.0e-65 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 628 4.2e-65 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 644 4.8e-65 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 643 6.4e-65 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 643 6.4e-65 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 632 7.3e-65 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 656 2.3e-64 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 656 2.3e-64 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 656 2.3e-64 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 656 2.3e-64 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 656 2.3e-64 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 656 2.3e-64 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 656 2.3e-64 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 655 2.9e-64 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 655 2.9e-64 1
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 508 3.8e-64 4
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 653 4.7e-64 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 628 4.7e-64 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 628 4.7e-64 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 651 7.6e-64 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 647 2.1e-63 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 625 2.3e-63 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 645 3.8e-63 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 641 1.2e-62 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 641 1.2e-62 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 641 1.2e-62 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 639 2.0e-62 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 639 2.0e-62 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 634 7.7e-62 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 625 8.5e-61 1
WB|WBGene00004195 - symbol:prx-6 species:6239 "Caenorhabd... 596 3.2e-60 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 618 5.4e-60 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 618 5.4e-60 1
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 511 2.2e-59 3
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 511 2.2e-59 3
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 499 5.2e-58 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 499 5.2e-58 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 532 5.6e-58 3
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 516 1.2e-57 3
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 531 1.5e-57 4
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 512 1.9e-57 4
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 528 1.6e-56 4
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 505 2.0e-56 3
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 581 7.5e-56 1
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 511 3.0e-55 3
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 501 3.2e-55 4
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 505 5.5e-55 4
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 525 7.2e-55 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 539 1.4e-54 3
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 503 2.5e-54 4
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 545 5.2e-54 2
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 591 7.0e-54 2
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac... 587 7.9e-54 1
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 587 1.3e-53 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 505 2.5e-53 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 494 3.2e-53 4
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 574 5.1e-53 1
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 579 1.4e-52 2
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 576 3.1e-52 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 567 3.3e-52 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 565 5.5e-52 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 534 8.2e-52 3
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 534 8.2e-52 3
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 491 1.9e-51 2
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 572 6.3e-51 2
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 510 6.5e-51 2
UNIPROTKB|E2RLT2 - symbol:PEX1 "Uncharacterized protein" ... 559 1.0e-50 1
UNIPROTKB|E2RCK9 - symbol:PEX1 "Uncharacterized protein" ... 559 1.3e-50 1
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 503 1.7e-50 2
UNIPROTKB|I3LPI5 - symbol:PEX1 "Uncharacterized protein" ... 556 2.3e-50 1
ZFIN|ZDB-GENE-070530-1 - symbol:pex1 "peroxisome biogenes... 554 3.4e-50 1
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 539 1.5e-49 2
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 525 1.7e-47 2
UNIPROTKB|G4MQP9 - symbol:MGG_09299 "Peroxisome biosynthe... 520 2.0e-47 3
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 524 2.3e-47 2
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 524 2.3e-47 2
ASPGD|ASPL0000002697 - symbol:pexA species:162425 "Emeric... 533 3.2e-47 3
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 386 2.0e-46 3
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 453 3.6e-46 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 509 5.0e-46 1
WARNING: Descriptions of 606 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 1729 (613.7 bits), Expect = 4.5e-178, P = 4.5e-178
Identities = 375/658 (56%), Positives = 464/658 (70%)
Query: 26 MVERRKPLVLSSTKLLINSVLSSSR--RVTGENLV---GDDVSPSLQLPAGILRFSKDKI 80
MVERR PLVLSST+ + SVL+SS+ G+ ++ GD + + +L AGILR+ KD
Sbjct: 1 MVERRNPLVLSSTRSTLRSVLNSSQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60
Query: 81 DISDAKFXXXXXXXXXXXXTCVLKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPP-TTRK 139
++SDAK T +LK+LS+ SGSLV+VKN E QR+AQVVVLDPP TT +
Sbjct: 61 NVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE 120
Query: 140 QVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFLVHQ 199
V S TML FP+ L +LLD++VAYLSP+LAFNL LHIS LK LVH+
Sbjct: 121 DASLTQVPVSDSLHTMLVFPTYDLM--GQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHR 178
Query: 200 GKEVLESLFIAKVDD---GTSGQDGKASLIKLGLQSVGQLPKYASHLRVSFVKIPECGTL 256
G VLE F AK D+ G S +DG S I L L+ V Q+P YASHLRVSFVKIPECGT+
Sbjct: 179 GNGVLEKYFEAKCDEEFIGKSAEDG--SKIGLDLEPVSQVPGYASHLRVSFVKIPECGTI 236
Query: 257 ESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHR 316
SLK +S+ EAE+RQ ID AL YF DR L+RGD+F + I+WNC S IC PC QRL
Sbjct: 237 PSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCS 296
Query: 317 RSDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTV 376
SD+ IYFKV+A+EPS E LRVN ++TALVLGG++ S LPPDLL+ S +PLQ +TV
Sbjct: 297 ESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETV 356
Query: 377 KILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
ILAS+L+P LCPS L+ K RVAVLLHG+PGCGKRTVV+YVARRLG+HVVE+SCH+L+AS
Sbjct: 357 NILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLAS 416
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
SERKTS ALAQ FN A+ YSPTILLLR FDVF+NL S + D+VG+S E+ASVIRE T
Sbjct: 417 SERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELT 476
Query: 497 EPSAEDE---DEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPL 553
EP + + +E+S+ F E+ K QVLL+A+A+S+EG+ PTIRRCFSHEI MG L
Sbjct: 477 EPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSL 536
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSN 613
++QR EMLSQ LQ VS+ + S+EF+K ++GQTSGF+PRDL ALVADAGANL
Sbjct: 537 NDEQRSEMLSQSLQGVSQFLN-ISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQE 595
Query: 614 SEVDKNEPGESDLTAKVAHNDNSSIAATQVM-GKEDLVKAMERSKKRNASALGAPKLP 670
SE K DL H + +T+ + KED KA++RSKKRNASALGAPK+P
Sbjct: 596 SETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVP 653
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 254/372 (68%), Positives = 284/372 (76%)
Query: 565 LLQPVSELTSDTGSEEFV-KDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGE 623
L + + L +D G+ ++ ++ + + DLH + A+ I S ++ E
Sbjct: 575 LPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQ-ASQIDNSTEKLTAKEDFT 633
Query: 624 SDLTAKVAHNDNSSIAATQVMG-KEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLR 682
L N S++ A +V K D V +E K S L +LPLLHKDLFSSGLR
Sbjct: 634 KALDRSKKRNA-SALGAPKVPNVKWDDVGGLEDVK---TSILDTVQLPLLHKDLFSSGLR 689
Query: 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 742
KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF+KARSA
Sbjct: 690 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSA 749
Query: 743 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL+DSSQDLFIIGASNRPDLI
Sbjct: 750 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLI 809
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
DPALLRPGRFDKLLYVGVN+D SYRERVLKALTRKFKL EDVSLYS+AKKCP FTGADM
Sbjct: 810 DPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADM 869
Query: 863 YALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKY 922
YALCADAWF AAKRKV D DSVVVEY DF+K + +LSPSLS+ ELKKY
Sbjct: 870 YALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKY 929
Query: 923 ELLRDQFEGSSN 934
E+LRDQF+G S+
Sbjct: 930 EMLRDQFQGRSS 941
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 1018 (363.4 bits), Expect = 2.0e-112, Sum P(4) = 2.0e-112
Identities = 230/592 (38%), Positives = 349/592 (58%)
Query: 363 SGSNDFVPLQ---GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR 419
S N VPL+ + K + +++P L S F +LL+G G GKRT++ VA+
Sbjct: 630 SKDNSMVPLELIYENEFKTIVDLISPFLMGDKFSFDFNCTLLLNGPQGVGKRTLLNRVAK 689
Query: 420 RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPN 479
++GIHV E C+ L E K + A + +PT+L+L++F+V +
Sbjct: 690 QMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTLLILKNFEVLEQTAQSMQQEK 749
Query: 480 DQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPT 539
+ LS + +++++ + + + + +P+ ++ +S + L
Sbjct: 750 KESNLSQTLINILKDINDSNTSNINSNK---YPL-----------IITVTVNSMDELSNK 795
Query: 540 IRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHA 599
+R F HEI++ E QR ++L L + L D G+ +K++ +T+ F+ +L A
Sbjct: 796 VRNWFKHEITLNSPDENQRFKILKYLTK---NLPIDIGNTVSIKNLSIRTASFLNSNLRA 852
Query: 600 LVADAGANLIRK--SNSEV--DKNEPGE----------SDLT---AKVAHNDNSSIAATQ 642
L+ + N +++ S ++ D+ +P E D+ +++ +SSI A +
Sbjct: 853 LIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSSIGAPK 912
Query: 643 VMGKE-DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLA 701
+ D V + K + +LPL H LF+SG+ KRSG+LL+GPPGTGKTLLA
Sbjct: 913 IPNVSWDDVGGLANVKSEIMDTI---QLPLEHPHLFASGIGKRSGILLFGPPGTGKTLLA 969
Query: 702 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA 761
KA+ATECSLNFLSVKGPELINMYIGESEKN+R+IF KAR A+PCVIFFDELDSLAP+RG
Sbjct: 970 KAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGN 1029
Query: 762 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
DSGGVMDRVVSQ+LAE+DG+ SS D+FIIGA+NRPDL+D +L+RPGR D+LLY+G++
Sbjct: 1030 GADSGGVMDRVVSQLLAELDGMQKSS-DVFIIGATNRPDLLDSSLMRPGRLDRLLYLGIS 1088
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
S+ + ++L+ALTRKF L +DV L + + CP N TGAD YAL +DA +A ++
Sbjct: 1089 SEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITAS 1148
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+Q ++V + F+K + L PS+S+ EL+ Y ++ QF G++
Sbjct: 1149 INGEINEE-EQNQKLIVYQNHFIKAVNSLVPSVSLDELEYYHKVQKQFSGNN 1199
Score = 51 (23.0 bits), Expect = 2.0e-112, Sum P(4) = 2.0e-112
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 168 MELLDRQVAYLSPLLAFNLDLHISSLKFLVHQGKEVLESLF 208
++L D QV YL P+ FNL++ + FL E++ + F
Sbjct: 432 LKLKD-QVLYLPPISIFNLNIDYKN--FLKLSNYEIISNQF 469
Score = 45 (20.9 bits), Expect = 2.0e-112, Sum P(4) = 2.0e-112
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 24 DSMVERRKPLVLSSTKLLINSVLSSSRRVTGENL-VGDDVSPSLQLPA--GILRFSKDKI 80
D+ ++ L LS+ +I+ +++ S T +N +GD + P+ GIL +K I
Sbjct: 299 DNKLKLNNNLRLSN--FIIHPIINISNNTTTKNEDIGDSNNLFHFTPSSKGILSNNKKFI 356
Query: 81 DISDAK-------FXXXXXXXXXXXXTCV-----LKQLSVTSGSLVLVKN 118
+IS K F C+ LK L++ +GS + +KN
Sbjct: 357 NISQLKSIPTEIDFEFDISKEYDYLVDCLVSLNTLKSLNLFNGSWIKIKN 406
Score = 40 (19.1 bits), Expect = 2.0e-112, Sum P(4) = 2.0e-112
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 278 LHNYFEVDRYLARGDVFSVC---------INWNCSSMICIPCRQRLHRRSDNIIYFKVVA 328
L YF+ R L + D+ + IN N S+ + ++N++YFKV
Sbjct: 520 LEKYFQKKRLLKQNDIIVISTKVNNEEELINSNNSNNNNNYNNNNNNNNNNNLVYFKVEI 579
Query: 329 VEPSE------ETVLRVNCTKTALVLGGSIPSALP 357
+ ++ + ++ T+++ GS S +P
Sbjct: 580 ILCNQFENINGNQIYLIDKNTTSIIQEGSSNSMVP 614
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 1023 (365.2 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 271/683 (39%), Positives = 383/683 (56%)
Query: 273 KIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAV 329
K D L+ +F R + GDV +C++ I +RL R + ++FKV V
Sbjct: 336 KYDHVLYQHFHTPRVVQEGDV--LCVSTAGQVEILEGSLERLPRWRE--VFFKVKKTVGE 391
Query: 330 EPS-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN---DFVPLQG--DTVKILASIL 383
P + + T T+L L G+ S +PP L SG + D + G V L ++L
Sbjct: 392 APDGPASAFLADTTHTSLYLAGTTLSRVPP--LPSGRSPPWDSLSPPGLEALVNELCAVL 449
Query: 384 APTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA 443
P L P L VLL G PG GK T V RLG+H+++ C +L A S R
Sbjct: 450 KPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVET 509
Query: 444 ALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDE 503
L F+ A+ P +LLL D L+ + D +G + V + +R DE
Sbjct: 510 KLQTTFSRARRCRPVVLLLTALD----LLGRD---RDGLGEDARVVATLRHLLL----DE 558
Query: 504 DEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLS 563
D P+ C +++VA + LP +R F HE+ + L+E QR+ +L
Sbjct: 559 D-------PLSR----C-PPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQ 606
Query: 564 QLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAG-ANLIRKSNSEVDKNEPG 622
L + L G E + + + +GF+ DL+AL+ A A R + + +E
Sbjct: 607 AL---TAHLP--LGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEED 661
Query: 623 ESDLTAK----VAHN-----DNSSIAATQVMGKEDL-------VKAMERSKKRNASALGA 666
E +L A +A + D A +Q +G + V ++ KK +
Sbjct: 662 EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETI-- 719
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G
Sbjct: 720 -QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVG 777
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S
Sbjct: 778 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-S 836
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL
Sbjct: 837 TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSL 896
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
++ CPP TGAD+Y+LC+DA A KR+V ++ ++++ +D ++
Sbjct: 897 MNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLE----PRSSALLLTMEDLLQA 952
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 953 AARLQPSVSEQELLRYKRIQRKF 975
Score = 49 (22.3 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 23/86 (26%), Positives = 35/86 (40%)
Query: 212 VDDGTSGQD-GKASLIKLGLQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDR 270
++D T+ +D G SL+ G P +A L + + P CG + G
Sbjct: 297 LEDSTAAEDKGSCSLLP-G-------PPFARELHIEVLPSPHCG----VNG--------- 335
Query: 271 QEKIDLALHNYFEVDRYLARGDVFSV 296
K D L+ +F R + GDV V
Sbjct: 336 --KYDHVLYQHFHTPRVVQEGDVLCV 359
Score = 40 (19.1 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V T++ +AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVARVGELPNTSQPHLAQVQVLEP 247
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 1023 (365.2 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 271/683 (39%), Positives = 383/683 (56%)
Query: 273 KIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAV 329
K D L+ +F R + GDV +C++ I +RL R + ++FKV V
Sbjct: 336 KYDHVLYQHFHTPRVVQEGDV--LCVSTAGQVEILEGSLERLPRWRE--VFFKVKKTVGE 391
Query: 330 EPS-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN---DFVPLQG--DTVKILASIL 383
P + + T T+L L G+ S +PP L SG + D + G V L ++L
Sbjct: 392 APDGPASAFLADTTHTSLYLAGTTLSRVPP--LPSGRSPPWDSLSPPGLEALVNELCAVL 449
Query: 384 APTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA 443
P L P L VLL G PG GK T V RLG+H+++ C +L A S R
Sbjct: 450 KPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVET 509
Query: 444 ALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDE 503
L F+ A+ P +LLL D L+ + D +G + V + +R DE
Sbjct: 510 KLQTTFSRARRCRPVVLLLTALD----LLGRD---RDGLGEDARVVATLRHLLL----DE 558
Query: 504 DEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLS 563
D P+ C +++VA + LP +R F HE+ + L+E QR+ +L
Sbjct: 559 D-------PLSR----C-PPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQ 606
Query: 564 QLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAG-ANLIRKSNSEVDKNEPG 622
L + L G E + + + +GF+ DL+AL+ A A R + + +E
Sbjct: 607 AL---TAHLP--LGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEED 661
Query: 623 ESDLTAK----VAHN-----DNSSIAATQVMGKEDL-------VKAMERSKKRNASALGA 666
E +L A +A + D A +Q +G + V ++ KK +
Sbjct: 662 EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETI-- 719
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G
Sbjct: 720 -QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVG 777
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S
Sbjct: 778 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-S 836
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL
Sbjct: 837 TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSL 896
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
++ CPP TGAD+Y+LC+DA A KR+V ++ ++++ +D ++
Sbjct: 897 MNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLE----PRSSALLLTMEDLLQA 952
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 953 AARLQPSVSEQELLRYKRIQRKF 975
Score = 49 (22.3 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 23/86 (26%), Positives = 35/86 (40%)
Query: 212 VDDGTSGQD-GKASLIKLGLQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDR 270
++D T+ +D G SL+ G P +A L + + P CG + G
Sbjct: 297 LEDSTAAEDKGSCSLLP-G-------PPFARELHIEVLPSPHCG----VNG--------- 335
Query: 271 QEKIDLALHNYFEVDRYLARGDVFSV 296
K D L+ +F R + GDV V
Sbjct: 336 --KYDHVLYQHFHTPRVVQEGDVLCV 359
Score = 40 (19.1 bits), Expect = 4.5e-109, Sum P(3) = 4.5e-109
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V T++ +AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVARVGELPNTSQPHLAQVQVLEP 247
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 1011 (360.9 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 272/683 (39%), Positives = 381/683 (55%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV +C++ I +RL R + ++FKV V P
Sbjct: 339 DHVLYRHFQTPRVVQEGDV--LCVSTAGQVEILEGSLERLPRWRE--MFFKVKKTVGEAP 394
Query: 332 S-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN---DFVPLQG--DTVKILASILAP 385
+ + T T+L L G+ S +P L SG + D + G V L +IL P
Sbjct: 395 EGPASAFLADTTHTSLYLAGTALSHVPS--LPSGRSPPWDSLSPPGLEALVNELCAILKP 452
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L VLL G PG GK T V RLG+H+++ C +L A S R L
Sbjct: 453 HLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKL 512
Query: 446 AQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
F+ A+ P +LLL D L+ + D +G + VA+ +R DED
Sbjct: 513 QATFSRARRCRPAVLLLTAVD----LLGRD---RDGLGEDARVAATLRHLLL----DEDA 561
Query: 506 ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQL 565
S C +++VA + LP ++ F HE+ + L+E QR+ +L L
Sbjct: 562 LSR-----------C-PPLMVVATTSRVQDLPTDVQTAFPHELEVPVLSEAQRLSILQAL 609
Query: 566 LQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPG 622
+ L G E + + + +GF+ DL+AL+ A IR S S +E
Sbjct: 610 ---TAHLP--LGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEED 664
Query: 623 ESDLTAK----VAHN-----DNSSIAATQVMGKEDL-------VKAMERSKKRNASALGA 666
E DL +A + D A +Q +G + V ++ KK +
Sbjct: 665 EGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETI-- 722
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G
Sbjct: 723 -QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVG 780
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S
Sbjct: 781 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-S 839
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL
Sbjct: 840 TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSL 899
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
++ CPP TGAD+Y+LC+DA A KR+V ++ ++++ +D ++
Sbjct: 900 ANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEL----RSSALLLTMEDLLQA 955
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 956 AARLQPSVSEQELLRYKRIQRKF 978
Score = 43 (20.2 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 100 TCVLKQLSVTSGSLVLVKN-AE---TTKQRIAQVVVLDP 134
+C L+ L + G V V AE +++ R+AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVAQVAELPNSSQPRLAQVQVLEP 247
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 854 (305.7 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 201/426 (47%), Positives = 269/426 (63%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
V++V + S LP + F H++++ L+E QR +LS L + + L D K
Sbjct: 658 VVVVGSVSSQHELPSDVMAAFVHQVAIESLSEDQRRMVLSSLSEDLL-LGKDVNLGRIAK 716
Query: 584 DIIGQTSGFMPRDLHALVADAGA----NLIRKSNSEVDKNEPGESDLTAK---VAHNDNS 636
QT+GF+ DL AL+ +AG L+ E +E E DL V D S
Sbjct: 717 ----QTAGFVLGDLCALLTNAGKAAHRRLVETYFPEA-VSEQEEEDLCVSGVSVTSEDFS 771
Query: 637 SI------AATQVMGKEDL-------VKAMERSKKRNASALGAPKLPLLHKDLFSSGLRK 683
+ A +Q +G + V +++ KK L +LPL H +L S GLR
Sbjct: 772 AALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKE---ILDTIQLPLEHPELLSLGLR- 827
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
RSG+LLYGPPGTGKTLLAKAVATEC++ FLSVKGPELINMY+G+SE+N+R + KARSA
Sbjct: 828 RSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAA 887
Query: 744 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ SS D+F+IGA+NRPDL+D
Sbjct: 888 PCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLH-SSGDVFVIGATNRPDLLD 946
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
+LLRPGRFDKL+YVG+N D + +VLKA+ RKFK+ V L I + CPP TGAD+Y
Sbjct: 947 QSLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLY 1006
Query: 864 ALCADAWFHAAKRKVLXXXXXXXXXRID-QADSVVVEYDDFVKVLRELSPSLSMAELKKY 922
+LC+DA A KRK+ +D + S+ + +DF + L L PS+S ++ +Y
Sbjct: 1007 SLCSDAMMCAVKRKI-----SRITEGVDSELSSLTLCSEDFSEALSGLQPSVSEQQISRY 1061
Query: 923 ELLRDQ 928
+LL+ +
Sbjct: 1062 QLLQQK 1067
Score = 182 (69.1 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 321 IIYFKV-----VAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQ--- 372
++YF+V + E E + + + T+L +GGS S P +L S+ + L
Sbjct: 474 VLYFRVKQACGFSSEEEEASSYLADSSHTSLYMGGSAHSLCPYSVLPEASSFWTSLSPPG 533
Query: 373 -GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
TV+ L +I+ P L S L LK ++LL G G GK T VR V+RRL +H+++ C
Sbjct: 534 LSSTVEKLITIIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCV 593
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
L A + + A + F A+ + P +LLLR+ +
Sbjct: 594 TLCADTAAASEAKIKSVFERAELHHPCLLLLRNLQL 629
Score = 143 (55.4 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 681 LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKAR 740
L++ +LL GP G+GK +AV+ L+ + V L SE ++ +F++A
Sbjct: 556 LKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAE 615
Query: 741 SARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA-SNR 798
PC++ L L +R GA D RV + + I ++ S + ++G+ S++
Sbjct: 616 LHHPCLLLLRNLQLLGQSRDGAETDC-----RVAATLCQLIAAVHTS---VVVVGSVSSQ 667
Query: 799 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 858
+L P+ + ++ ++ D R VL +L+ L +DV+L IAK+ F
Sbjct: 668 HEL--PSDVMAAFVHQVAIESLSED--QRRMVLSSLSEDLLLGKDVNLGRIAKQTA-GFV 722
Query: 859 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQAD----SVVVEYDDFVKVLRELSPSL 914
D+ AL +A AA R+++ ++ D V V +DF L L +
Sbjct: 723 LGDLCALLTNAG-KAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEAH 781
Query: 915 SMA 917
S A
Sbjct: 782 SQA 784
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 990 (353.6 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 267/684 (39%), Positives = 382/684 (55%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV +C+ I ++L R + ++FKV + P
Sbjct: 338 DHVLYRHFQTPRAVQEGDV--LCVPTVGQVEILEGSPEKLPRWWE--MFFKVKKTIGEAP 393
Query: 332 SEET-VLRVNCTKTALVLGGSIPSALPPDLLISGS----NDFVPLQGDT-VKILASILAP 385
T + T T+L L GS S +P L SG N P +T V L + L P
Sbjct: 394 DGPTSAYLADITHTSLYLVGSTLSLVPR--LTSGESTPWNSLSPPGLETLVTELCAALKP 451
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L +VLL G PG GK T V RLG+H+++ C +L A S L
Sbjct: 452 RLQPGGALLTGTSSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKL 511
Query: 446 AQAFNTAQSYSPTILLLRDFDVF-RNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
F+ A+ P +LLL D+ RN D +G + V + + + DED
Sbjct: 512 QATFSRARRCRPVVLLLTAVDLLGRN--------RDGLGEDARVVATLCHLLQ----DED 559
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQ 564
P+ C +++VA ++ LP ++ F HE+ + L+E QR+ +L
Sbjct: 560 -------PLTS----C-PPLMVVATTSQAQDLPADVQTAFPHELEVPVLSEGQRLSVLQA 607
Query: 565 LLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEP 621
L + L G E + + + +GF+ DL+AL+ + I+ S +E
Sbjct: 608 L---TAHLP--LGQEVNLTQLARRCAGFVVGDLYALLTHSSRVACTRIKNSGLAGGLSEE 662
Query: 622 GESDLTAK----VAHNDNSSI-----AATQVMGKEDL-------VKAMERSKKRNASALG 665
E +L A +A + ++ A +Q +G + V ++ KK +
Sbjct: 663 DEGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAPKIPSVSWHDVGGLQEVKKEILETI- 721
Query: 666 APKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYI 725
+LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+
Sbjct: 722 --QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYV 778
Query: 726 GESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND 785
G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG +GDSGGVMDRVVSQ+LAE+DGL+
Sbjct: 779 GQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLH- 837
Query: 786 SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVS 845
S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VGV+ D + + RVL A+TRKFKL VS
Sbjct: 838 STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFKLEPSVS 897
Query: 846 LYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVK 905
L ++ +CPP TGAD+Y+LC+DA A KR+V + ++++ DD ++
Sbjct: 898 LVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEEGLEPG----SSTLLLTMDDLLQ 953
Query: 906 VLRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 954 AAARLQPSVSEQELLRYKRIQRKF 977
Score = 40 (19.1 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V A T++ +A+V VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVTRAGESSNTSQPHLARVQVLEP 247
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 990 (353.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 265/681 (38%), Positives = 380/681 (55%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F++ R + GDV +C+ I ++L R + ++FKV V P
Sbjct: 338 DGVLYRHFQIPRVVQEGDV--LCVPTIGQVEILEGSPEKLPRWRE--MFFKVKKTVGEAP 393
Query: 332 S-EETVLRVNCTKTALVLGGSIPSA---LPPDLLISGSNDFVPLQGDTVKILASILAPTL 387
+ + T T+L + GS S LP + S+ P V L ++L P L
Sbjct: 394 DGPASAYLADTTHTSLYMVGSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRL 453
Query: 388 CPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQ 447
P L +VLL G PGCGK TVV LG+H+++ C +L A S L
Sbjct: 454 QPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQA 513
Query: 448 AFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEES 507
F+ A+ P +LLL D L+ + D +G + V +V+R +ED
Sbjct: 514 IFSRARRCRPAVLLLTAVD----LLGRD---RDGLGEDARVMAVLRHLLL----NED--- 559
Query: 508 HGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQ 567
P+ C +++VA ++ LP ++ F HE+ + L+E QR+ +L L
Sbjct: 560 ----PLNS----C-PPLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSILRAL-- 608
Query: 568 PVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPGES 624
+ L G E + + + +GF+ DL+AL+ A I+ S E E
Sbjct: 609 -TAHLP--LGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNSGLAGGLTEEDEG 665
Query: 625 DLTAK----VAHNDNSSI-----AATQVMGKEDL-------VKAMERSKKRNASALGAPK 668
+L A +A + ++ A +Q +G + V ++ KK + +
Sbjct: 666 ELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETI---Q 722
Query: 669 LPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+S
Sbjct: 723 LPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 781
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+Q
Sbjct: 782 EENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQ 840
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
D+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL VSL +
Sbjct: 841 DVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVN 900
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLR 908
+ CPP TGAD+Y+LC+DA A KR+V + ++++ +D ++
Sbjct: 901 VLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPG----SSALMLTMEDLLQAAA 956
Query: 909 ELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 957 RLQPSVSEQELLRYKRIQRKF 977
Score = 38 (18.4 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 100 TCVLKQLSVTSGSLVLVKNAE----TTKQRIAQVVVLDP 134
+C L+ L + G V V A T++ +A+V VL+P
Sbjct: 210 SC-LRGLGLFQGEWVWVAQARESSNTSQPHLARVQVLEP 247
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 268/683 (39%), Positives = 375/683 (54%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCI-NWNCSSMICIPCRQRLHRRSDNIIYFKVV----AV 329
D L+ +F+ R + GDV +C+ + C+ + + L R + +YFKV V
Sbjct: 37 DRLLYRHFQTPRLVQEGDV--LCVPTFGCAEFLDGNADKFL-RWPE--LYFKVRKVLGTV 91
Query: 330 EPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQ----GDTVKILASILAP 385
E + + T+L L GS SA+P + + L D VK + L P
Sbjct: 92 EGMQSEGYLADTQNTSLYLVGSTNSAVPSAPAYTSHEFWSSLSPAGLSDVVKEICDALRP 151
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L +L +VLL G G GK VR V L +H+ + C +L + T +
Sbjct: 152 HLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKI 211
Query: 446 AQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
AF AQ Y P +LLL+D +V D++G + V + +R+ D +
Sbjct: 212 HMAFAQAQQYHPCVLLLKDIEVLGR-------DRDRLGEDARVIATLRQLLLD--RDPAQ 262
Query: 506 ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQL 565
SH PV I C+ Q +P ++ F HE+ + L+E QR MLS L
Sbjct: 263 SSH---PVLVIGTTCKPQ-----------DVPTDVQTAFLHEVKIEALSEDQRRAMLSML 308
Query: 566 LQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPG 622
+ G E + + +T+GF+ D AL++ A I+ + NE
Sbjct: 309 TASLP-----LGKEVSLAKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEV 363
Query: 623 ESDL-TA--KVAHND-NSSI-----AATQVMGKEDL-------VKAMERSKKRNASALGA 666
E D TA V D N ++ A +Q +G + V + KK L
Sbjct: 364 ERDFCTAGFPVLEEDFNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKE---ILDT 420
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L S GL RSG+LLYGPPGTGKTLLAKAVAT C++ FLSVKGPELINMY+G
Sbjct: 421 IQLPLEHPELLSLGLC-RSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVG 479
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
+SE+NVR++F +AR+A PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ S
Sbjct: 480 QSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH-S 538
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
S+++F+IGA+NRPDL+DPALLRPGRFDKL+YVGVN D + +VL A+TRKFKL V+L
Sbjct: 539 SREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNL 598
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
SI ++CP TGAD+Y+LC+DA A KRKV ++ ++++ +DF++
Sbjct: 599 SSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEEGLDT----ESSALILTMEDFLQA 654
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+L++ +F
Sbjct: 655 AARLQPSVSEQELLRYKLIQQKF 677
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 266/683 (38%), Positives = 376/683 (55%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV V + P ++L R + ++FKV V P
Sbjct: 338 DHVLYRHFQTPRAVQEGDVLCVPTVGQVEILEASP--EKLPRWQE--MFFKVKRTVGEAP 393
Query: 332 SEET-VLRVNCTKTALVLGGSIPSALPPDLLISG-SNDFVPLQGDTVKILAS----ILAP 385
+ + T+L L GS S +P L SG S + L ++ L + L P
Sbjct: 394 DGQARAYLADSAHTSLYLVGSTLSLVPR--LPSGDSTPWSSLSPPGLEALVTELCTALKP 451
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L +VLL G PG GK T V RLG+H+++ C +L A S L
Sbjct: 452 RLQPGGALLTGTGSVLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKL 511
Query: 446 AQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
AF+ A+ P +LLL D L+ + D +G + V + +R DED
Sbjct: 512 QAAFSRARRCRPVVLLLTAVD----LLGRD---RDGLGEDARVVATLRHLLL----DED- 559
Query: 506 ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQL 565
P+ C +++VA ++ LP ++ F HE+ + L E QR+ +L L
Sbjct: 560 ------PLAS----C-PPLMVVATTSRAQDLPADVQTAFPHELEVPVLAEAQRLSVLRAL 608
Query: 566 LQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPG 622
+ L G E + + + +GF+ DL AL+ A I+ S +E
Sbjct: 609 ---TAHLP--LGQEVNLAQLARRCAGFVVGDLFALLTHSSRAACTRIKNSGWAGGLSEED 663
Query: 623 ESDLTAK----VAHNDNSSI-----AATQVMGKEDL-------VKAMERSKKRNASALGA 666
E +L A +A + ++ A +Q +G + V ++ KK +
Sbjct: 664 EGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKEILETI-- 721
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G
Sbjct: 722 -QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVG 779
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
+SE+NVR++F +AR+A PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ S
Sbjct: 780 QSEENVREVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH-S 838
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VGVN D + + RVL A+TRKF+L VSL
Sbjct: 839 TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSL 898
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
+ CPP TGAD+Y+LC+DA A KR+V + ++++ +D ++
Sbjct: 899 VDVLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEEGLEPG----SSALLLTMEDLLQA 954
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L PS+S EL +Y+ ++ +F
Sbjct: 955 AARLQPSVSEQELLRYKRIQRKF 977
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 238/573 (41%), Positives = 335/573 (58%)
Query: 376 VKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMA 435
V L ++L P L P L +VLL G PGCGK TVV +LG+H+++ C +L A
Sbjct: 32 VSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCA 91
Query: 436 SSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREF 495
S L F+ A+ P +LLL D L+ + D +G + V + +R
Sbjct: 92 DSSGAVETKLQAIFSRARRCRPAVLLLTAVD----LLGRD---RDGLGEDARVVAALRHL 144
Query: 496 TEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTE 555
DED P+ C +++VA ++ LP ++ F HE+ + L+E
Sbjct: 145 LL----DED-------PLNS----C-PPLMVVATTSRAQDLPADVQTAFPHELEVPALSE 188
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKS 612
QR+ +L L + L G E + + + +GF+ DL+AL+ A I+
Sbjct: 189 GQRLSILRAL---TAHLP--LGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNL 243
Query: 613 NSEVDKNEPGESDLTAK----VAHNDNSSI-----AATQVMGKEDL-------VKAMERS 656
E E +L A +A + ++ A +Q +G + V ++
Sbjct: 244 GLAGGLTEEDEGELCAAGFPLLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEV 303
Query: 657 KKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716
KK + +LPL H +L S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVK
Sbjct: 304 KKEILETI---QLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVK 359
Query: 717 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQM 776
GPELINMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+
Sbjct: 360 GPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQL 419
Query: 777 LAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 836
LAE+DGL+ S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TR
Sbjct: 420 LAELDGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITR 478
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSV 896
KFKL VSL ++ CPP TGAD+Y+LC+DA A KR+V + ++
Sbjct: 479 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPG----SSAL 534
Query: 897 VVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 929
++ +D ++ L PS+S EL +Y+ ++ +F
Sbjct: 535 MLTMEDLLQAAARLQPSVSEQELLRYKRIQHKF 567
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 248/610 (40%), Positives = 350/610 (57%)
Query: 344 TALVLGGSIPSALPPDLLISGSN----DFVPLQGDT-VKILASILAPTLCPSVLSLKFRV 398
T++ L GS S +P L SG + P +T V L + L P L P L
Sbjct: 396 TSVYLVGSTLSLVPG--LPSGESTPWSSLSPPGLETLVTELCAALKPRLQPGGALLTAPG 453
Query: 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPT 458
+VLL G PG GK T V RLG+H+++ C +L A S L AF+ A+ P
Sbjct: 454 SVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPV 513
Query: 459 ILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEK 518
+LLL D+ L D+ GL + A V+ +++ SH P
Sbjct: 514 VLLLTAVDL---------LGRDRDGLGED-ARVVATLRRLLLDEDPLTSH---P------ 554
Query: 519 ICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
+++VA ++ LP ++ F HE+ + L+E QR+ +L L + L G
Sbjct: 555 ----PLMVVATTSRAQDLPADVQTAFPHELEVPVLSEGQRLSILQAL---TAHLP--LGQ 605
Query: 579 EEFVKDIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPGESDLTAK----VA 631
E + + + +GF+ DL+AL+ A I+ S +E E +L A +A
Sbjct: 606 EVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLA 665
Query: 632 HNDNSSI-----AATQVMGKEDL-------VKAMERSKKRNASALGAPKLPLLHKDLFSS 679
+ ++ A +Q +G + V ++ KK + +LPL H +L S
Sbjct: 666 EDLGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETI---QLPLEHPELLSL 722
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +A
Sbjct: 723 GLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARA 781
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP 799
R+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NRP
Sbjct: 782 RAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRP 840
Query: 800 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 859
DL+DPALLRPGRFDKL++VG + D + + RVL A+TRKF+L VSL ++ CPP TG
Sbjct: 841 DLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTG 900
Query: 860 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 919
AD+Y+LCADA A KR+V + ++++ +D ++ L PS+S EL
Sbjct: 901 ADLYSLCADAMTAALKRRVRDLEDGLEPG----SSALLLTMEDLLQAAARLQPSVSEHEL 956
Query: 920 KKYELLRDQF 929
+Y+ ++ +F
Sbjct: 957 LRYKRIQRKF 966
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 814 (291.6 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 209/531 (39%), Positives = 297/531 (55%)
Query: 376 VKILASILAPTLCPSVLSLKFRVAVLLHGLPG-CGKRTVVRYVARRLGIHVVEYSCHNLM 434
V+ L +IL + S + +VLLH GK T+VR+ ++ LGIH++E C +L
Sbjct: 454 VRQLVNILETSFNCSQRGITLNASVLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLT 513
Query: 435 ASSER--KTSAAL----AQAFNTAQSYSPTILLLRDFD-VFRNLVSNESLPND---QVGL 484
++S + TS + A+ N SP ++ L D + ++ +N+ P Q +
Sbjct: 514 SNSRQLDSTSKIIGYIRAKCENVLPYASPAVIFLAHLDSILLDVNANQD-PEAIKLQKSI 572
Query: 485 SSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCF 544
+ E++ ++ +FT FP V + ++ + +P + R
Sbjct: 573 NFEMSKLLDDFTFK------------FP----------GTTFVGSVNNIDNVPSSFRSHM 610
Query: 545 SHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK--DIIGQTS------GFMPRD 596
EI + +E QR+ + L EL D + V D I +S G P D
Sbjct: 611 RFEILVPVPSEAQRLRIFQWYLSS-HELNRDVQQKVPVSYMDNISFSSLSSYSAGLTPLD 669
Query: 597 LHALVADAGANLIRKSNSEVDK----------NEPGESDLTAKVAHNDNSSIAATQVMGK 646
+ ++V A + E K + S T+K + + SI A Q+
Sbjct: 670 IKSIVETARMTATARFYQESKKCGWLPQSILITQEDLSKATSKARNEFSVSIGAPQIPNV 729
Query: 647 E-DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 705
D + ++ K L +PL H +LF+SG++KRSG+L YGPPGTGKTL+AKA+A
Sbjct: 730 TWDDIGGIDFVK---GEILDTIDMPLKHPELFTSGMKKRSGILFYGPPGTGKTLMAKAIA 786
Query: 706 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 765
T SLNF SVKGPEL+NMYIGESE NVR +FQKAR A+PCVIFFDE+DS+AP RG GDS
Sbjct: 787 TNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDS 846
Query: 766 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 825
GGVMDR+VSQ+LAE+DG++ + +F+IGA+NRPDL+D ALLRPGRFDKLLY+G+ +
Sbjct: 847 GGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDT 906
Query: 826 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ +L+ALTRKF L DV L +AK CP N+TGAD YALC+DA +A R
Sbjct: 907 KQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSR 957
Score = 97 (39.2 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
VVV+ +DF+K +L+PS+S AEL YE +R FEG+
Sbjct: 994 VVVKMEDFLKAQEQLTPSVSRAELNHYEAVRANFEGA 1030
Score = 44 (20.5 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 103 LKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPPTTRKQ 140
L +L VTSGS + V N R+ ++ VL P K+
Sbjct: 240 LLRLDVTSGSFITVSNMGCV--RLVKLFVLLLPNGFKK 275
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 723 (259.6 bits), Expect = 7.8e-91, Sum P(5) = 7.8e-91
Identities = 139/213 (65%), Positives = 172/213 (80%)
Query: 668 KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
+LPL +LF+ G++KRSG+L YGPPGTGKTLLAKA+ATE SLNF SVKGPEL+NMYIGE
Sbjct: 1013 QLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGE 1072
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN--- 784
SE NVR +FQ+AR ARPCV+FFDELDS+AP RG GDSGGVMDR+VSQ+LAE+DG++
Sbjct: 1073 SEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGD 1132
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
DS +F+IGA+NRPDL+D ALLRPGRFDKLLY+GV+ + +++ALTRKF L V
Sbjct: 1133 DSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTLHPSV 1192
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
SL ++A+K P +TGAD YALC+DA A R+
Sbjct: 1193 SLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQ 1225
Score = 105 (42.0 bits), Expect = 7.8e-91, Sum P(5) = 7.8e-91
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
+L+A + +P +R F+HE+ M E +R +L ++ + D G + +
Sbjct: 847 VLIATTTEPDKIPDGVRGLFTHELEMTAPDEGEREGILRSIVDQRG-INLDPGVD--LGG 903
Query: 585 IIGQTSGFMPRDL-----HALVADAGA--NLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
+ +T+ + DL A+VA +L K++ N+P + +VA
Sbjct: 904 VALKTAALVAGDLVDVIDRAIVAQRSRLESLAEKASQSRQGNQPAVTLRDVQVAGG---- 959
Query: 638 IAATQVMGKEDLVKAMERSKKRNASALGAPKLP 670
A + + K DL A+E ++K A A+GAPK+P
Sbjct: 960 -TAVRGLTKGDLDTAVEAARKNFADAIGAPKIP 991
Score = 68 (29.0 bits), Expect = 7.8e-91, Sum P(5) = 7.8e-91
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 931
V+V +D + E+ PS+S EL YE +R FEG
Sbjct: 1261 VMVTEEDLLAAHEEMIPSVSAGELAHYERVRATFEG 1296
Score = 64 (27.6 bits), Expect = 7.0e-79, Sum P(3) = 7.0e-79
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 497 EPSAEDEDEESHGYFPVKEIEKI-C--RQQVLLVA-AADSSEGLPPTIRRCFSHEISMGP 552
+PSAED+DE +H Y V + +I C V + A AA + G P F + P
Sbjct: 399 KPSAEDDDE-AHIYVDVSHLSRIGCFSGDWVRVEASAAPPANGFGPFALGSFGEPDAQEP 457
Query: 553 LTEQQRVEMLSQLL--QPVSELTSDT--G-SEEFVKDIIGQTSG 591
+ RV L + +PVS + S G S F + + ++SG
Sbjct: 458 VWRPARVFGLPEGYSNRPVSRIPSSKHRGRSLSFFESQVQKSSG 501
Score = 62 (26.9 bits), Expect = 7.8e-91, Sum P(5) = 7.8e-91
Identities = 30/129 (23%), Positives = 52/129 (40%)
Query: 379 LASILAPTLCPSVLSLKF-RVAVLLHGLP-GCGKRTVVRYVARRLGIHVVEYSCHNLM-- 434
+ S+LA + LK VA+LL GK T+ R +G+H + ++++
Sbjct: 731 MRSLLAAATSKRAIHLKAPAVAILLVSTQRNIGKATLATDTCRDIGLHTFTINAYDILNE 790
Query: 435 ---ASSERKTSAALAQAFNTAQSYSPTI--LLLRDFDVFRNLVSNESLPNDQVGLSSEVA 489
S+ KT L A S P LL+R + ++ + + + S+
Sbjct: 791 GGGGGSDVKTDGTLKARAERALSCGPEFCALLIRHIEA----LTADRMATSLRSILSDAR 846
Query: 490 SVIREFTEP 498
+I TEP
Sbjct: 847 VLIATTTEP 855
Score = 47 (21.6 bits), Expect = 7.8e-91, Sum P(5) = 7.8e-91
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 175 VAYLSPLLAFNLDLHISSLKFL 196
+AY SP+L NLDL S L+ L
Sbjct: 503 LAYASPILLANLDLP-SHLRLL 523
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 796 (285.3 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 189/439 (43%), Positives = 267/439 (60%)
Query: 515 EIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTS 574
++ K + + +++ S E +P I E+ L +R+E+L V +
Sbjct: 517 DLVKSPQGRYIVIGTCHSIEKIPYEILSESFFELKFSELEMDERLELLKIYANNV--IID 574
Query: 575 DTGSEEFVKDIIGQTSGFMPRDLHAL---VADAGANLIRKS---NSEVDKNEP--GESDL 626
S +KD+ +T+ +L L + A + I+++ N + + P E D+
Sbjct: 575 KRIS---LKDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDV 631
Query: 627 TAKV--AHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKR 684
+ + S+ T D + +E +K L +LPL +LFS GL+ R
Sbjct: 632 DVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTL---QLPLQFPELFSQGLKPR 688
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
SGVLLYGPPGTGKTLLAKAVATE SL F+S+KGPEL+NMY+GESE NVR++F+KAR++ P
Sbjct: 689 SGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSP 748
Query: 745 CVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN-DSSQDLFIIGASNRPDLID 803
CVIFFDELDS+AP RG S DSG VMDRVVSQ+LAE+D ++ D+++ +F+IGA+NRPDL+D
Sbjct: 749 CVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLD 808
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
P+LLRPGRFDKL+Y+G+N + +L+ALT+ FKL E + L IAK C PNFTGADMY
Sbjct: 809 PSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMY 868
Query: 864 ALCADAWFHAAKRK-----VLXXXXXXXXX------RIDQADSVVVEY--DDFVKVLREL 910
ALC+DA A KRK +L R + DS+ + +DF+ L++L
Sbjct: 869 ALCSDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLELRITKEDFLTSLKKL 928
Query: 911 SPSLSMAELKKYELLRDQF 929
PS+S EL +YE++R QF
Sbjct: 929 RPSISEQELHRYEMVRHQF 947
Score = 84 (34.6 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 45/189 (23%), Positives = 73/189 (38%)
Query: 287 YLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKVVAVEPSEETVLRVNCTKTAL 346
+L +F V IN ++ + + L R +D I++ V ++P + T++
Sbjct: 316 FLQSKQIFCVPINSLMANSDSVDILE-LTRNTDAYIWYSVEEIDPLNTYNIYYTNEDTSI 374
Query: 347 VLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLP 406
VL + L P L N FV + + K+L A P + F LLHG P
Sbjct: 375 VLDTQLSHRLLPSLRKPLLN-FVKVHPPSQKLLRFCRA-FFDPQQVP-GFNPFFLLHGNP 431
Query: 407 GCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
GK V VA V S + ++ A L I+ ++D D
Sbjct: 432 FTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAIIFVKDLD 491
Query: 467 VFRNLVSNE 475
V ++ S+E
Sbjct: 492 VL-SISSDE 499
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 769 (275.8 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 207/546 (37%), Positives = 308/546 (56%)
Query: 356 LPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLP-GCGKRTVV 414
LPP + DF + + K L++ LA S ++LK ++LL + G GK T+V
Sbjct: 516 LPPIFNYEETGDFKYAK-EFKKTLSTCLA-----SKINLK--TSILLTSMSRGIGKTTLV 567
Query: 415 RYVARRLGIHVVEYSCHNLM-ASSERKTSAALAQAFN----TAQSYSPT-ILLLRDFDVF 468
R LG++++E C +L+ E KT L + QS S ++ L+ +
Sbjct: 568 RNSCIELGLNLIELDCFDLLNPGQELKTIGLLTGKIDKLIANVQSTSSFHVIYLKHIE-- 625
Query: 469 RNLV--SNESLPNDQV--GLSSEVASVIREFTEPSAEDEDEES-HGYFPVKE-IEKICRQ 522
NL ++E+ N + LS ++ V+ ++ + S + Y + + ++ I +
Sbjct: 626 -NLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDYDKLNDNLKSIIKF 684
Query: 523 QVLLVAAADSS--EGLPPTIR----RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
+ +++ E I + F+ +I+ P T ++ + + LQ D
Sbjct: 685 TIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPFTIRKDINFKNLALQSAGLTPRDL 744
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGA---NLIRKSNSEVDKNEPGESDLTAKVAHN 633
S II ++ + L L D+ N++ N V P + + A N
Sbjct: 745 IS------IIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWVPDDFNAAINEARN 798
Query: 634 DNS-SIAATQVMG-KEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYG 691
S SI A ++ K + + ++ K L +PL H +LF++GL+KRSG+L YG
Sbjct: 799 QFSDSIGAPRIPNVKWEDIGGLDLVKDE---ILDTIDMPLKHPELFNNGLKKRSGILFYG 855
Query: 692 PPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDE 751
PPGTGKTLLAKA+AT SLNF SVKGPEL+NMYIGESE NVR +FQ+AR A+PCVIFFDE
Sbjct: 856 PPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDE 915
Query: 752 LDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD-LFIIGASNRPDLIDPALLRPG 810
LDS+AP RG GDSGGVMDR+VSQ+LAE+DG++ D +F++GA+NRPDL+D ALLRPG
Sbjct: 916 LDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPG 975
Query: 811 RFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAW 870
RFDK+LY+G++ + ++L+ALTRKFKL ++V+L +A KC FTGAD YALC+D+
Sbjct: 976 RFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSM 1035
Query: 871 FHAAKR 876
+A R
Sbjct: 1036 LNAMTR 1041
Score = 92 (37.4 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 891 DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 931
+Q +V+V+ +DF+K EL PS+S EL+ Y +R+ FEG
Sbjct: 1077 EQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEG 1117
Score = 39 (18.8 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 177 YLSPLLAFNLDLHISS 192
Y+SP+L NL L S
Sbjct: 341 YMSPILLINLKLQKDS 356
Score = 37 (18.1 bits), Expect = 5.4e-85, Sum P(3) = 5.4e-85
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 361 LISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLH 403
L++ +ND + L +K + P L +S+ + LLH
Sbjct: 107 LVNFNNDSLTLNKAVIKSIDYDDIPKLSQIFVSIPHEIYQLLH 149
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 769 (275.8 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 207/546 (37%), Positives = 308/546 (56%)
Query: 356 LPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLP-GCGKRTVV 414
LPP + DF + + K L++ LA S ++LK ++LL + G GK T+V
Sbjct: 516 LPPIFNYEETGDFKYAK-EFKKTLSTCLA-----SKINLK--TSILLTSMSRGIGKTTLV 567
Query: 415 RYVARRLGIHVVEYSCHNLM-ASSERKTSAALAQAFN----TAQSYSPT-ILLLRDFDVF 468
R LG++++E C +L+ E KT L + QS S ++ L+ +
Sbjct: 568 RNSCIELGLNLIELDCFDLLNPGQELKTIGLLTGKIDKLIANVQSTSSFHVIYLKHIE-- 625
Query: 469 RNLV--SNESLPNDQV--GLSSEVASVIREFTEPSAEDEDEES-HGYFPVKE-IEKICRQ 522
NL ++E+ N + LS ++ V+ ++ + S + Y + + ++ I +
Sbjct: 626 -NLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDYDKLNDNLKSIIKF 684
Query: 523 QVLLVAAADSS--EGLPPTIR----RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
+ +++ E I + F+ +I+ P T ++ + + LQ D
Sbjct: 685 TIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPFTIRKDINFKNLALQSAGLTPRDL 744
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGA---NLIRKSNSEVDKNEPGESDLTAKVAHN 633
S II ++ + L L D+ N++ N V P + + A N
Sbjct: 745 IS------IIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWVPDDFNAAINEARN 798
Query: 634 DNS-SIAATQVMG-KEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYG 691
S SI A ++ K + + ++ K L +PL H +LF++GL+KRSG+L YG
Sbjct: 799 QFSDSIGAPRIPNVKWEDIGGLDLVKDE---ILDTIDMPLKHPELFNNGLKKRSGILFYG 855
Query: 692 PPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDE 751
PPGTGKTLLAKA+AT SLNF SVKGPEL+NMYIGESE NVR +FQ+AR A+PCVIFFDE
Sbjct: 856 PPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDE 915
Query: 752 LDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD-LFIIGASNRPDLIDPALLRPG 810
LDS+AP RG GDSGGVMDR+VSQ+LAE+DG++ D +F++GA+NRPDL+D ALLRPG
Sbjct: 916 LDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPG 975
Query: 811 RFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAW 870
RFDK+LY+G++ + ++L+ALTRKFKL ++V+L +A KC FTGAD YALC+D+
Sbjct: 976 RFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSM 1035
Query: 871 FHAAKR 876
+A R
Sbjct: 1036 LNAMTR 1041
Score = 92 (37.4 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 891 DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 931
+Q +V+V+ +DF+K EL PS+S EL+ Y +R+ FEG
Sbjct: 1077 EQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEG 1117
Score = 39 (18.8 bits), Expect = 3.3e-85, Sum P(3) = 3.3e-85
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 177 YLSPLLAFNLDLHISS 192
Y+SP+L NL L S
Sbjct: 341 YMSPILLINLKLQKDS 356
Score = 37 (18.1 bits), Expect = 5.4e-85, Sum P(3) = 5.4e-85
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 361 LISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLH 403
L++ +ND + L +K + P L +S+ + LLH
Sbjct: 107 LVNFNNDSLTLNKAVIKSIDYDDIPKLSQIFVSIPHEIYQLLH 149
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 742 (266.3 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 161/374 (43%), Positives = 237/374 (63%)
Query: 560 EMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEVD 617
E SQ + +S +T + ++D+ ++ GF+ DL L +A IR + +D
Sbjct: 529 ENQSQFMPRISPSWRETLN--VLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLD 586
Query: 618 KNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF 677
+ ++ + + D+ + D + + + K S++G LPL H L
Sbjct: 587 MSHFAKNLTDMQSSFADSLGAPKVPKVYWSD-IGGLAKLKDEIQSSIG---LPLKHVHLM 642
Query: 678 SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 737
LR RSG+LLYGPPGTGKTL+AKAVATEC+L+FLSV+GPEL+NMY+G+SE+NVR++F
Sbjct: 643 GKNLR-RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFS 701
Query: 738 KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIGA 795
+ARSA PCV+F DELDSLAP RG +GDSGGVMDRVVSQ+LAE+DG++D +S+ +FI+ A
Sbjct: 702 RARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAA 761
Query: 796 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 855
+NRPDLIDPALLRPGRFDKL YVG S + VL+A T++F L V + IA++
Sbjct: 762 TNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKS 821
Query: 856 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 915
+GAD+Y++C++AW A +R + + ++V+V+ +DF K + PS+S
Sbjct: 822 EMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSIS 881
Query: 916 MAELKKYELLRDQF 929
+L+ + L+ +
Sbjct: 882 AKDLEYFNNLKASY 895
Score = 105 (42.0 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 55/231 (23%), Positives = 95/231 (41%)
Query: 272 EKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKVVAVEP 331
E ++ L NYF R + RG + + +N + ++ + K + +E
Sbjct: 229 ELTEVILSNYFNTPRLMHRGHTYRIEVNAELVGTATYAHYYLIFAHLRHV-HLKCIHLET 287
Query: 332 S-EETVLRVNCTK--TALVLGGSIPSALPPDLLISGS--NDFVPLQGDTVKILASILAPT 386
E L+ K + LV + S LP +L S + ++ K+L S +
Sbjct: 288 KGSEFELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAF 347
Query: 387 LCP--SVLSLKFRVAV-LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA 443
L + LS K V LL G G GK +V VA+ LG+H+ C +++ T
Sbjct: 348 LPKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEM 407
Query: 444 ALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIRE 494
L F +Q P ++ +F++F + NE N+ + L S ++E
Sbjct: 408 KLKAVFAKSQVCEPLMICFHNFEIFG--IDNEG--NEDLRLLSAFHVQVQE 454
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 730 (262.0 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 138/213 (64%), Positives = 174/213 (81%)
Query: 668 KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
+LPL +LF+ G++KRSG+L YGPPGTGKTLLAKA+ATE SLNF SVKGPEL+NMYIGE
Sbjct: 1042 QLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGE 1101
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN--- 784
SE NVR +FQ+AR ARPCV+FFDELDS+AP RG GDSGGVMDR+VSQ+LAE+DG+N
Sbjct: 1102 SEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGE 1161
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
++S +F+IGA+NRPDL+D ALLRPGRFDK+LY+GV+ + +L+ALTRKF L D+
Sbjct: 1162 ENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDL 1221
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
SL ++++ P +TGAD+YALC+DA A RK
Sbjct: 1222 SLARVSERLPLTYTGADLYALCSDAMLKAITRK 1254
Score = 305 (112.4 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 72/189 (38%), Positives = 111/189 (58%)
Query: 759 RGASGD-SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 817
+G SG ++ +++++ L ++G ++S +F+IGA+NRPDL+D ALLRPGRFDK+LY
Sbjct: 1136 QGDSGGVMDRIVSQLLAE-LDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLY 1194
Query: 818 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+GV+ + +L+ALTRKF L D+SL ++++ P +TGAD+YALC+DA A RK
Sbjct: 1195 LGVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRK 1254
Query: 878 VLXX------------XXXXXXXRIDQAD--SVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+ D +V+V +DFV EL PS+S EL+ +E
Sbjct: 1255 ATAVDEKIKQLPGGPVSTAYFFDHLSTPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFE 1314
Query: 924 LLRDQFEGS 932
+R FE +
Sbjct: 1315 RIRQMFEST 1323
Score = 106 (42.4 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 38/160 (23%), Positives = 70/160 (43%)
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSEL 572
V + +I +++A E +P IR F+HE + E++R +L VSE
Sbjct: 866 VSAMTEILADARVIIATTTDVEQIPEAIRSMFTHEFELTAPEEKEREGILRNA---VSER 922
Query: 573 TSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAH 632
+ + + + +T+ + DL +V A ++ R + E + T+K+
Sbjct: 923 SIKLAPDVDLGTVALKTAALVAGDLVDVVERA--SVARSTRLEKLAESASKQSPTSKITV 980
Query: 633 NDNSSIAATQVMG--KEDLVKAMERSKKRNASALGAPKLP 670
D V G K D A++ ++K A ++GAPK+P
Sbjct: 981 RDVLLAGGEAVRGVTKADFDAAVDAARKNFADSIGAPKIP 1020
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 205/642 (31%), Positives = 324/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF + +P I+ + + D + S++ P+ Q EV R
Sbjct: 278 LAGESESNLRKAFEETEKNAPAIIFIDELDA---IASDDCFPSPQT--HGEVE---RRIV 329
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
D G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 330 SQLLTLMD----G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 377
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 378 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 432
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 433 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 492
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 493 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 550
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 551 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 610
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 611 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 668
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 669 PVAKDVDLDFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 727
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 728 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 769
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 204/644 (31%), Positives = 326/644 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
I FKVV +P ++ +T + G I + L + G +D + +I
Sbjct: 158 IEFKVVLTDPEPYCIV---APETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIK 214
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P PS+ + +K +L++G PG GK + R VA G + +M+
Sbjct: 215 EMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 274
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ SP I+ + + D + + +V + S +
Sbjct: 275 LAGESESNLRKAFEEAEKNSPAIIFIDEIDA---IAPKRDKTHGEV--ERRIVSQLLTLM 329
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ + SH ++++AA + + P +RR F EI +G
Sbjct: 330 DGMKKS----SH---------------LIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 370
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L ++ +L D E+ I ++ G + DL +L ++A IR+
Sbjct: 371 ATGRLEVL-RIHTKNMKLHDDVDLEQ----IAAESHGHVGADLASLCSEAALQQIREKMD 425
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D +++ ++++ A +A +N A T+ +E +V+ S K+
Sbjct: 426 LIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKE 485
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G++ GVL YGPPG GKTLLAKA+A EC NF+SVKGPE
Sbjct: 486 LQEL--VQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 543
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVRDIF KARSA PCV+FFDELDS+A ARG + GD+GG DRV++Q+L
Sbjct: 544 LLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILT 603
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG+ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + D S RE +LKA RK
Sbjct: 604 EMDGMG-AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKS-REAILKANLRKS 661
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV- 897
L ++V L IAK F+GAD+ +C A A R+ + R + +S +
Sbjct: 662 PLAKEVDLTYIAK-VTQGFSGADLTEICQRAC-KLAIRQAIEAEIRREKERAENQNSAMD 719
Query: 898 VEYDD---------FVKVLRELSPSLSMAELKKYELLRDQFEGS 932
++ DD F + ++ S+S +++KYE+ + S
Sbjct: 720 MDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQS 763
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 628 (226.1 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 162/438 (36%), Positives = 245/438 (55%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 336 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 394
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVD-KNEPGESDLTAKVAHN-DNS 636
E+ + +T G + DL AL ++A IRK +D ++E ++++ +A D+
Sbjct: 395 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 450
Query: 637 SIAATQVMG---KEDLVKAME---------RSKKRNASALGAPKLPLLHKDLFSS-GLRK 683
A +Q +E +V+ + KR L + P+ H D F G+
Sbjct: 451 RWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL--VQYPVEHPDKFLKFGMTP 508
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR+IF KAR A
Sbjct: 509 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 568
Query: 744 PCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++FIIGA+NRPD+I
Sbjct: 569 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDII 627
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
DPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +AK F+GAD+
Sbjct: 628 DPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLDFLAKMTN-GFSGADL 685
Query: 863 YALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDDFVKVLRELSPSL 914
+C A A + R+ +++ D V + D F + +R S+
Sbjct: 686 TEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 745
Query: 915 SMAELKKYELLRDQFEGS 932
S +++KYE+ + S
Sbjct: 746 SDNDIRKYEMFAQTLQQS 763
Score = 358 (131.1 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 91/258 (35%), Positives = 138/258 (53%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA E F +
Sbjct: 210 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GE E R A F D P+ G+ V R+VSQ
Sbjct: 270 NGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKS-DDCFPSPQTHGE---VERRIVSQ 325
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D + R +L+ T
Sbjct: 326 LLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHT 383
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL +DV L +A + + GAD+ ALC++A A ++K+ + +S
Sbjct: 384 KNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNS 442
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V DDF L + +PS
Sbjct: 443 LAVTMDDFRWALSQSNPS 460
Score = 58 (25.5 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 33/152 (21%), Positives = 60/152 (39%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVF 468
+ +A + + A T + + D F
Sbjct: 278 LAGEGESACRKKISPAPPPLKTAGIFKSDDCF 309
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 644 (231.8 bits), Expect = 4.8e-65, Sum P(2) = 4.8e-65
Identities = 194/570 (34%), Positives = 293/570 (51%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K +L++G PG GK + R VA G + +M+ ++ +
Sbjct: 247 PQLFKSI-GIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 305
Query: 445 LAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
L +AF A+ SP I+ + + D ++ N +V V S + +
Sbjct: 306 LRKAFEEAEKNSPAIIFIDEID---SIAPKREKTNGEV--ERRVVSQLLTLMD------- 353
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEML 562
G +K R V+++AA + + P +RR F E+ +G R+E+L
Sbjct: 354 ----G---MK-----ARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL 401
Query: 563 SQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG 622
++ +L D E+ I +T G++ DL +L ++A IR+ +D +E
Sbjct: 402 -RIHTKNMKLADDVDLEQ----IAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDED- 455
Query: 623 ESD---LTAKVAHNDNSSIA--ATQVMGKEDLVKAMERSKKRNASALGAPK--------L 669
E D L + DN A ++ + V + + + L K +
Sbjct: 456 EIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQM 515
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+++ + F G+ GVL +GPPGTGKTLLAKA+A ECS NF+SVKGPEL++M+ GES
Sbjct: 516 PVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGES 575
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSS 787
E NVRDIF KAR+A PCV+F DELDS+A ARGAS GDSGG DRVV+Q+L E+DG+N S
Sbjct: 576 ESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGG-DRVVNQLLTEMDGVN-SK 633
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLY 847
+++F+IGA+NRPD IDPAL+RPGR D+L+YV + D R +L+ R + EDV L
Sbjct: 634 KNVFVIGATNRPDQIDPALMRPGRLDQLIYVPL-PDEEARFSILQTQLRHTPVAEDVDLR 692
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV--- 904
++AK F+GAD+ + A A K + AD VV++ D V
Sbjct: 693 AVAK-ATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQV 751
Query: 905 ------KVLRELSPSLSMAELKKYELLRDQ 928
+ ++ S+S AE+++YE Q
Sbjct: 752 QRHHVEEAMKMARRSVSDAEVRRYEAYAHQ 781
Score = 435 (158.2 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 99/247 (40%), Positives = 148/247 (59%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H LF S G++ G+L+YGPPGTGKTL+A+AVA E F + GPE+++ G
Sbjct: 241 ELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAG 300
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
ESE N+R F++A P +IF DE+DS+AP R + +G V RVVSQ+L +DG+
Sbjct: 301 ESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQLLTLMDGMKAR 358
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
S ++ ++ A+NRP+ IDPAL R GRFD+ + VG+ D + R +L+ T+ KL +DV L
Sbjct: 359 S-NVVVMAATNRPNSIDPALRRFGRFDREVDVGI-PDPTGRLEILRIHTKNMKLADDVDL 416
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
IA + + G+D+ +LC++A + K+ + DS+ V D+F
Sbjct: 417 EQIAAETH-GYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFA 475
Query: 907 LRELSPS 913
L +PS
Sbjct: 476 LGSSNPS 482
Score = 38 (18.4 bits), Expect = 4.8e-65, Sum P(2) = 4.8e-65
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 342 TKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVL 401
T TA++ P++L D + N + L +T++ L T+ K V ++
Sbjct: 32 TATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLIV 91
Query: 402 L 402
L
Sbjct: 92 L 92
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 643 (231.4 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 192/567 (33%), Positives = 283/567 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILAS 381
+ FKVV V+P + + V+ G I L G +D + +I
Sbjct: 165 VEFKVVEVDPDDFCI--VSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREM 222
Query: 382 ILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSE 438
I P P + L +K VLL+G PG GK + R VA G + +M+
Sbjct: 223 IELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMA 282
Query: 439 RKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP 498
+ A L +AF A+ SP I+ + + D ++ N +V V S + +
Sbjct: 283 GEAEANLRRAFEEAEKNSPAIIFIDEID---SIAPKREKTNGEV--ERRVVSQLLTLMD- 336
Query: 499 SAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQ 556
G +K R QV+++AA + + P +RR F EI +G +
Sbjct: 337 ----------G---IKS-----RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 557 QRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV 616
R E+L ++ +L+ D EE + T GF+ DL L +A IR+ +
Sbjct: 379 GRFEIL-RIHTKNMKLSPDVKLEELASN----THGFVGADLAQLCTEAALTCIREKMDVI 433
Query: 617 D-KNEPGESD-LTAKVAHND--NSSIAATQVMGKEDLVKAMERSKKRNASALGAPK---- 668
D ++E + + L + D N ++ + V + K + L K
Sbjct: 434 DLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLR 493
Query: 669 ----LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723
P+ H D F G+ GVL YGPPG GKTLLAKAVA+ECS NF+S+KGPEL+ M
Sbjct: 494 EMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTM 553
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDG 782
+ GESE NVR++F KAR+A PCV+FFDELDS+ RG+S GD G DRV++Q+L EIDG
Sbjct: 554 WFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDG 613
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
+ ++LF IGA+NRP+L+D ALLRPGR D+L+Y+ + D+ R +L A+ RK + E
Sbjct: 614 VGPK-KNLFFIGATNRPELLDEALLRPGRLDQLIYIPL-PDLGARISILTAILRKCPVAE 671
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADA 869
+V + +A+K F+GAD+ LC A
Sbjct: 672 NVPIDFLAQKTA-GFSGADLAELCQRA 697
Score = 413 (150.4 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 102/263 (38%), Positives = 147/263 (55%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
KK+ A +LPL H LF + G++ GVLLYGPPG+GKT +A+AVA E F +
Sbjct: 213 KKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GE+E N+R F++A P +IF DE+DS+AP R + +G V RVVSQ
Sbjct: 273 NGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQ 330
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ Q + +I A+NR + IDPAL R GRFD+ + +GV D + R +L+ T
Sbjct: 331 LLTLMDGIKSRGQ-VVVIAATNRQNSIDPALRRFGRFDREIDIGVPDD-NGRFEILRIHT 388
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL DV L +A F GAD+ LC +A + K+ + +S
Sbjct: 389 KNMKLSPDVKLEELASNTH-GFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLES 447
Query: 896 VVVEYDDFVKVLRELSPSLSMAE 918
+ V D F L +PS S+ E
Sbjct: 448 MCVTQDHFNMALGTCNPS-SLRE 469
Score = 41 (19.5 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 608 LIRKSNSE--VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
L+ ++N E V K + S L + A ND++S+ A E+L
Sbjct: 10 LVDENNGENKVPKKK-NLSRLIVEEATNDDNSVVALNTKRMEEL 52
Score = 38 (18.4 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 913 SLSMAELKKYELLRDQFE 930
S+S A+L KY+ R +F+
Sbjct: 773 SVSQADLIKYDNFRIKFD 790
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 643 (231.4 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 192/567 (33%), Positives = 283/567 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILAS 381
+ FKVV V+P + + V+ G I L G +D + +I
Sbjct: 165 VEFKVVEVDPDDFCI--VSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREM 222
Query: 382 ILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSE 438
I P P + L +K VLL+G PG GK + R VA G + +M+
Sbjct: 223 IELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMA 282
Query: 439 RKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP 498
+ A L +AF A+ SP I+ + + D ++ N +V V S + +
Sbjct: 283 GEAEANLRRAFEEAEKNSPAIIFIDEID---SIAPKREKTNGEV--ERRVVSQLLTLMD- 336
Query: 499 SAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQ 556
G +K R QV+++AA + + P +RR F EI +G +
Sbjct: 337 ----------G---IKS-----RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 557 QRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV 616
R E+L ++ +L+ D EE + T GF+ DL L +A IR+ +
Sbjct: 379 GRFEIL-RIHTKNMKLSPDVKLEELASN----THGFVGADLAQLCTEAALTCIREKMDVI 433
Query: 617 D-KNEPGESD-LTAKVAHND--NSSIAATQVMGKEDLVKAMERSKKRNASALGAPK---- 668
D ++E + + L + D N ++ + V + K + L K
Sbjct: 434 DLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLR 493
Query: 669 ----LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723
P+ H D F G+ GVL YGPPG GKTLLAKAVA+ECS NF+S+KGPEL+ M
Sbjct: 494 EMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTM 553
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDG 782
+ GESE NVR++F KAR+A PCV+FFDELDS+ RG+S GD G DRV++Q+L EIDG
Sbjct: 554 WFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDG 613
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
+ ++LF IGA+NRP+L+D ALLRPGR D+L+Y+ + D+ R +L A+ RK + E
Sbjct: 614 VGPK-KNLFFIGATNRPELLDEALLRPGRLDQLIYIPL-PDLGARISILTAILRKCPVAE 671
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADA 869
+V + +A+K F+GAD+ LC A
Sbjct: 672 NVPIDFLAQKTA-GFSGADLAELCQRA 697
Score = 413 (150.4 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 102/263 (38%), Positives = 147/263 (55%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
KK+ A +LPL H LF + G++ GVLLYGPPG+GKT +A+AVA E F +
Sbjct: 213 KKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GE+E N+R F++A P +IF DE+DS+AP R + +G V RVVSQ
Sbjct: 273 NGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQ 330
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ Q + +I A+NR + IDPAL R GRFD+ + +GV D + R +L+ T
Sbjct: 331 LLTLMDGIKSRGQ-VVVIAATNRQNSIDPALRRFGRFDREIDIGVPDD-NGRFEILRIHT 388
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL DV L +A F GAD+ LC +A + K+ + +S
Sbjct: 389 KNMKLSPDVKLEELASNTH-GFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLES 447
Query: 896 VVVEYDDFVKVLRELSPSLSMAE 918
+ V D F L +PS S+ E
Sbjct: 448 MCVTQDHFNMALGTCNPS-SLRE 469
Score = 41 (19.5 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 608 LIRKSNSE--VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
L+ ++N E V K + S L + A ND++S+ A E+L
Sbjct: 10 LVDENNGENKVPKKK-NLSRLIVEEATNDDNSVVALNTKRMEEL 52
Score = 38 (18.4 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 913 SLSMAELKKYELLRDQFE 930
S+S A+L KY+ R +F+
Sbjct: 773 SVSQADLIKYDNFRIKFD 790
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 632 (227.5 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 193/581 (33%), Positives = 298/581 (51%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV VEP E V+ + T + G + + ++ G +D + +I
Sbjct: 171 VEFKVVDVEPEEYAVVAQD---TIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIR 227
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K VL++G PG GK + R VA G + +M+
Sbjct: 228 EMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSK 287
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D ++ N +V V S +
Sbjct: 288 MAGESESNLRKAFEEAEKNAPAIIFIDEID---SIAPKRDKTNGEV--ERRVVSQLLTLM 342
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K R V+++AA + + P +RR F E+ +G
Sbjct: 343 D-----------G---MK-----ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPD 383
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L ++ +L D E + +T G++ D+ +L ++A IR+
Sbjct: 384 ATGRLEVL-RIHTKNMKLADDVDLEA----LAAETHGYVGADIASLCSEAAMQQIREKMD 438
Query: 615 --EVDKNEPGESDLTAKVAHNDN----------SSIAATQVMGKE---DLVKAMERSKKR 659
++D++E L + DN S++ T V D V ++ K+
Sbjct: 439 LIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEE 498
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+ + P+LH D ++ GL GVL YGPPGTGKTLLAKAVATE S NF+SVKGP
Sbjct: 499 LKETV---EYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGP 555
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQML 777
EL++M+ GESE N+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L
Sbjct: 556 ELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLL 615
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + +++F+IGA+NRPD IDPA+LRPGR D+L+YV + D + R +L A RK
Sbjct: 616 TEMDGMN-AKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPL-PDENARLSILNAQLRK 673
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
L + L +IAK F+GAD+ + A +A K +
Sbjct: 674 TPLEPGLELTAIAK-ATQGFSGADLLYIVQRAAKYAIKDSI 713
Score = 441 (160.3 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 102/258 (39%), Positives = 153/258 (59%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ GVL+YGPPGTGKTL+A+AVA E F +
Sbjct: 220 RKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLI 279
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G V RVVSQ
Sbjct: 280 NGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT--NGEVERRVVSQ 337
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ S ++ +I A+NRP+ IDPAL R GRFD+ + +G+ D + R VL+ T
Sbjct: 338 LLTLMDGMKARS-NVVVIAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEVLRIHT 395
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL +DV L ++A + + GAD+ +LC++A + K+ + DS
Sbjct: 396 KNMKLADDVDLEALAAETH-GYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDS 454
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V D+F L +PS
Sbjct: 455 LGVTMDNFRFALGNSNPS 472
Score = 51 (23.0 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 892 QADSV-VVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + + F + ++ S+S AEL++YE Q + S
Sbjct: 746 EVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKAS 787
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 177 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 233
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 234 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 293
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 294 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 348
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 349 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 389
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 390 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 444
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 445 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 504
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 505 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 562
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 563 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 622
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 623 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 680
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 681 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 739
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 740 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 781
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 323/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L+ D E+ + +T G + DL AL ++A IRK
Sbjct: 374 STGRLEIL-QIHTKNMKLSDDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RIAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLDFLAKMTN-GFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 201/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQDL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 202/642 (31%), Positives = 323/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D ++ +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAMERS---------KKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ S +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-SKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RIAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV L +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PISKDVDLDFLAKMTN-GFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 508 (183.9 bits), Expect = 3.8e-64, Sum P(4) = 3.8e-64
Identities = 103/209 (49%), Positives = 146/209 (69%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ H +L++S G+ +GVLL+GPPG GKTLLAKAVA E NF+SVKGPEL+N Y+GES
Sbjct: 488 PIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 547
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +F +ARS+ PCVIFFDELD+L P R + RVV+ +L E+DGL S Q
Sbjct: 548 ERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASA--RVVNTLLTELDGLGSSRQ 605
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
+++I A+NRPD+IDPA+LRPGR + LL+V + S + R +L+ L R+ + + L
Sbjct: 606 GIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLE-RVEILQTLVRRLPIEFNEDLRR 664
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRK 877
+A++C F+GAD+ +L A ++A KR+
Sbjct: 665 LAEECE-GFSGADLTSLLRRAGYNAIKRR 692
Score = 381 (139.2 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 84/212 (39%), Positives = 133/212 (62%)
Query: 669 LPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+ ++ +S ++ GVLL+GPPG GKT++A A A E + F+S+ P +++ GE
Sbjct: 183 LPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGE 242
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
SEK +R+ F++A+ PC+IF DE+D++ P R S + R+V+Q+L +D L
Sbjct: 243 SEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQRE--MEKRIVAQLLTCMDDLALEK 300
Query: 788 QD---LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
D + ++ A+NRPD +D AL R GRFDK + + V S+ RE++L+ALTRK +L++D+
Sbjct: 301 TDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSE-PVREQILRALTRKMRLVDDL 359
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
++AK+ P F GAD+ L + A A KR
Sbjct: 360 DFKTLAKRTP-GFVGADLNDLVSTAGSTAIKR 390
Score = 110 (43.8 bits), Expect = 3.8e-64, Sum P(4) = 3.8e-64
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 362 ISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL 421
+ G +D V GD V + + L +V + VLLHG PGCGK + A L
Sbjct: 167 LGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPR---GVLLHGPPGCGKTMIANAFAAEL 223
Query: 422 GIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
G+ + S ++++ ++ AL + F A+ +P ++ + + D
Sbjct: 224 GVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEID 268
Score = 104 (41.7 bits), Expect = 3.8e-64, Sum P(4) = 3.8e-64
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++AA + + L +RR F EI+M +E R ++L L + + L
Sbjct: 298 LEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVREQILRALTRKM-RLV 356
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIR------KSNSEVDKNEPGESDLT 627
D +F K + +T GF+ DL+ LV+ AG+ I+ KSNS + + G+ DL+
Sbjct: 357 DDL---DF-KTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLLKSNSGEEMDIEGQDDLS 412
Query: 628 AKV 630
V
Sbjct: 413 PSV 415
Score = 62 (26.9 bits), Expect = 3.8e-64, Sum P(4) = 3.8e-64
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 898 VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 931
+++DDFV + PS++ ++KKY+ LR ++ G
Sbjct: 695 IKFDDFVAAKSFIRPSVT--DMKKYDKLRREWSG 726
Score = 58 (25.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 24/98 (24%), Positives = 49/98 (50%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRCFSHE--ISMGPLTEQQRVEMLSQLLQ--PVSELTSDT 576
RQ + ++AA + + + P + R E + + + +RVE+L L++ P+ E D
Sbjct: 604 RQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPI-EFNED- 661
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
++ + + GF DL +L+ AG N I++ ++
Sbjct: 662 -----LRRLAEECEGFSGADLTSLLRRAGYNAIKRRDT 694
Score = 45 (20.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 892 QADSVVVEYDDFVKVLRELSPS 913
+A+ V+V DDF L ++ PS
Sbjct: 433 EAEVVLVSNDDFFTALPKIQPS 454
Score = 43 (20.2 bits), Expect = 3.5e-57, Sum P(4) = 3.5e-57
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 478 PNDQVGLSSEVASVIREFTEPSAED 502
P + GL EV V+R+ + AE+
Sbjct: 7 PTLRQGLDKEVYQVVRKIVDDQAEN 31
Score = 43 (20.2 bits), Expect = 3.5e-57, Sum P(4) = 3.5e-57
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 134 PPTTRKQVCDGDVHS---KHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLL 182
P TT+K+ G+ HS + + + P H+ D+ LD V L L+
Sbjct: 130 PTTTKKRHHGGESHSSKRRKAENAVDRSPPTHVSLADLGGLDDVVQQLGDLV 181
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 197/642 (30%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
I FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 166 IEFKVIETDPAEYCVVAPD---TEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRE 222
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 223 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 282
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF A+ +P+I+ + + D ++ + +V + S + +
Sbjct: 283 AGESESNLRKAFEEAEKNAPSIIFIDEID---SIAPKREKTHGEV--ERRIVSQLLTLMD 337
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G +K R V+++ A + + P +RR F EI +G E
Sbjct: 338 -----------G---LKS-----RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E+L ++ +L D E KD T G++ DL AL +A IR+
Sbjct: 379 IGRLEVL-RIHTKNMKLAEDVDLERVSKD----THGYVGADLAALCTEAALQCIREKMDV 433
Query: 616 VD-KNEPGESDLTAKVA----H------NDN-SSIAATQV----MGKEDLVKAMERSKKR 659
+D +E ++++ +A H N N S++ T V + ED + +E K+
Sbjct: 434 IDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWED-IGGLENVKRE 492
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+ + P+ H + F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGP
Sbjct: 493 LQETV---QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 549
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQML 777
EL+ M+ GESE NVR+IF KAR + PCV+FFDELDS+A RG S GD+GG DRV++Q+L
Sbjct: 550 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLL 609
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + + +FIIGA+NRPD+IDPALLRPGR D+L+Y+ + + S R ++ K+ RK
Sbjct: 610 TEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES-RYQIFKSCLRK 667
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV-------LXXXXXXXXXRI 890
+ +DV L ++AK F+GAD+ +C + +A + +
Sbjct: 668 SPVAKDVDLRALAKYTQ-GFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEE 726
Query: 891 DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
D+ + ++ F + ++ S+S A+++KY+ + S
Sbjct: 727 DEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQS 768
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 628 (226.1 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 189/611 (30%), Positives = 301/611 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV EP+ + V+ G I + + G +D ++ +I
Sbjct: 167 VEFKVVETEPAPACI--VSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKE 224
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 225 MVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM 284
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF + P IL + + D + N +V + S + +
Sbjct: 285 SGESESNLRKAFEECEKNQPAILFIDEIDA---IAPKREKTNGEV--ERRIVSQLLTLMD 339
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G VK R ++++AA + + +RR F EI +G
Sbjct: 340 -----------G---VKG-----RSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDA 380
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E+L ++ +L D E+ I + GF+ DL +L ++A IR+
Sbjct: 381 VGRLEIL-RIHTKNMKLADDVDLEQ----IANECHGFVGADLASLCSEAALQQIREKMEL 435
Query: 616 VD-KNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGA-------- 666
+D +++ ++++ +A + A L +A+ + S +G
Sbjct: 436 IDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKREL 495
Query: 667 ---PKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 722
+ P+ H + + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+
Sbjct: 496 QELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 555
Query: 723 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQMLAEI 780
M+ GESE NVRD+F KAR+A PCV+FFDELDS+A ARG A GD GG DRV++Q+L E+
Sbjct: 556 MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEM 615
Query: 781 DGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840
DG+N + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++LKA RK L
Sbjct: 616 DGMN-AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RHQILKASLRKTPL 673
Query: 841 LEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY 900
+D+ L +AK F+GAD+ +C A A + + + QA +
Sbjct: 674 SKDLDLTFLAKNTV-GFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Query: 901 DDFVKVLRELS 911
DD V + E++
Sbjct: 733 DDAVDPVPEIT 743
Score = 426 (155.0 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 97/258 (37%), Positives = 151/258 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA E F +
Sbjct: 216 RKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++ +P ++F DE+D++AP R + +G V R+VSQ
Sbjct: 276 NGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT--NGEVERRIVSQ 333
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ S +L +I A+NRP+ ID AL R GRFD+ + +G+ V R +L+ T
Sbjct: 334 LLTLMDGVKGRS-NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG-RLEILRIHT 391
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL +DV L IA +C F GAD+ +LC++A + K+ + +S
Sbjct: 392 KNMKLADDVDLEQIANECH-GFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNS 450
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V ++F + SPS
Sbjct: 451 LAVTMENFRFAQGKSSPS 468
Score = 48 (22.0 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 226 IKLG-LQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYF-E 283
I+LG + S+ P + R+ + I + T+E L G+ D+ L YF E
Sbjct: 100 IRLGDVVSITPAPNLSYGTRIHVLPIDD--TIEGLTGNL----------FDVFLKPYFLE 147
Query: 284 VDRYLARGDVFSV 296
R L +GD+F+V
Sbjct: 148 AYRPLHKGDIFTV 160
Score = 45 (20.9 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 471 LVSNESLPNDQVGLSSEVASVIR 493
+VS+ES PN++V ++ V + +R
Sbjct: 77 IVSDESCPNEKVRMNRVVRNNLR 99
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 628 (226.1 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 189/611 (30%), Positives = 301/611 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV EP+ + V+ G I + + G +D ++ +I
Sbjct: 167 VEFKVVETEPAPACI--VSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKE 224
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 225 MVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM 284
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF + P IL + + D + N +V + S + +
Sbjct: 285 SGESESNLRKAFEECEKNQPAILFIDEIDA---IAPKREKTNGEV--ERRIVSQLLTLMD 339
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G VK R ++++AA + + +RR F EI +G
Sbjct: 340 -----------G---VKG-----RSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDA 380
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E+L ++ +L D E+ I + GF+ DL +L ++A IR+
Sbjct: 381 VGRLEIL-RIHTKNMKLADDVDLEQ----IANECHGFVGADLASLCSEAALQQIREKMEL 435
Query: 616 VD-KNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGA-------- 666
+D +++ ++++ +A + A L +A+ + S +G
Sbjct: 436 IDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKREL 495
Query: 667 ---PKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 722
+ P+ H + + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+
Sbjct: 496 QELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 555
Query: 723 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQMLAEI 780
M+ GESE NVRD+F KAR+A PCV+FFDELDS+A ARG A GD GG DRV++Q+L E+
Sbjct: 556 MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEM 615
Query: 781 DGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840
DG+N + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++LKA RK L
Sbjct: 616 DGMN-AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RHQILKASLRKTPL 673
Query: 841 LEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY 900
+D+ L +AK F+GAD+ +C A A + + + QA +
Sbjct: 674 SKDLDLTFLAKNTV-GFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Query: 901 DDFVKVLRELS 911
DD V + E++
Sbjct: 733 DDAVDPVPEIT 743
Score = 426 (155.0 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 97/258 (37%), Positives = 151/258 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA E F +
Sbjct: 216 RKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++ +P ++F DE+D++AP R + +G V R+VSQ
Sbjct: 276 NGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT--NGEVERRIVSQ 333
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ S +L +I A+NRP+ ID AL R GRFD+ + +G+ V R +L+ T
Sbjct: 334 LLTLMDGVKGRS-NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG-RLEILRIHT 391
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL +DV L IA +C F GAD+ +LC++A + K+ + +S
Sbjct: 392 KNMKLADDVDLEQIANECH-GFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNS 450
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V ++F + SPS
Sbjct: 451 LAVTMENFRFAQGKSSPS 468
Score = 48 (22.0 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 226 IKLG-LQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYF-E 283
I+LG + S+ P + R+ + I + T+E L G+ D+ L YF E
Sbjct: 100 IRLGDVVSITPAPNLSYGTRIHVLPIDD--TIEGLTGNL----------FDVFLKPYFLE 147
Query: 284 VDRYLARGDVFSV 296
R L +GD+F+V
Sbjct: 148 AYRPLHKGDIFTV 160
Score = 45 (20.9 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 471 LVSNESLPNDQVGLSSEVASVIR 493
+VS+ES PN++V ++ V + +R
Sbjct: 77 IVSDESCPNEKVRMNRVVRNNLR 99
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 200/642 (31%), Positives = 322/642 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L+ D E+ + +T G + DL AL ++A IRK
Sbjct: 374 STGRLEIL-QIHTKNMKLSDDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-IKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RMAILKANLRKS 664
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRID 891
+ +DV + +AK F+GAD+ +C A A + R+ ++
Sbjct: 665 PVAKDVDVDFLAKMTN-GFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVE 723
Query: 892 QADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 647 (232.8 bits), Expect = 2.1e-63, P = 2.1e-63
Identities = 189/581 (32%), Positives = 298/581 (51%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 165 VEFKVIETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRE 221
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 281
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF A+ +P+I+ + + D ++ N +V + S + +
Sbjct: 282 AGESESNLRKAFEEAEKNAPSIIFIDEID---SIAPKREKTNGEV--ERRIVSQLLTLMD 336
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G +K R V+++ A + + P +RR F EI +G E
Sbjct: 337 -----------G---LKS-----RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 377
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E+L ++ +L D E KD T G++ DL AL +A IR+
Sbjct: 378 IGRLEVL-RIHTKNMKLAEDVDLERISKD----THGYVGADLAALCTEAALQCIREKMDV 432
Query: 616 VDKNEPG-ESDLTAKVA----H------NDN-SSIAATQV----MGKEDLVKAMERSKKR 659
+D + ++++ +A H N N S++ T V + ED + +E K+
Sbjct: 433 IDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWED-IGGLENVKRE 491
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+ + P+ H + F G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGP
Sbjct: 492 LQETV---QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 548
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQML 777
EL+ M+ GESE NVR+IF KAR + PCV+FFDELDS+A RG S GD+GG DRV++Q+L
Sbjct: 549 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLL 608
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + + +FIIGA+NRPD+ID ALLRPGR D+L+Y+ + + S R + KA RK
Sbjct: 609 TEMDGMN-AKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKACLRK 666
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+ +DV + ++AK F+GAD+ +C A +A + +
Sbjct: 667 SPVAKDVDVTALAKYTQ-GFSGADITEICQRACKYAIRENI 706
Score = 449 (163.1 bits), Expect = 3.6e-39, P = 3.6e-39
Identities = 103/258 (39%), Positives = 150/258 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF S G++ G+LLYGPPG+GKTL+A+AVA E F +
Sbjct: 213 RKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G V R+VSQ
Sbjct: 273 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--NGEVERRIVSQ 330
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + +GV ++ R VL+ T
Sbjct: 331 LLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG-RLEVLRIHT 388
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L I+K + GAD+ ALC +A + K+ + +S
Sbjct: 389 KNMKLAEDVDLERISKDTH-GYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V + F L +PS
Sbjct: 448 MAVSNEHFHTALGNSNPS 465
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 625 (225.1 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 162/438 (36%), Positives = 245/438 (55%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 70 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 128
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVD-KNEPGESDLTAKVAHN-DNS 636
E+ + +T G + DL AL ++A IRK +D ++E ++++ +A D+
Sbjct: 129 EQ----VGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 184
Query: 637 SIAATQVMG---KEDLVKAME---------RSKKRNASALGAPKLPLLHKDLFSS-GLRK 683
A +Q +E +V+ + KR L + P+ H D F G+
Sbjct: 185 RWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL--VQYPVEHPDKFLKFGMTP 242
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR+IF KAR A
Sbjct: 243 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 302
Query: 744 PCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++FIIGA+NRPD+I
Sbjct: 303 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDII 361
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
DPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +AK F+GAD+
Sbjct: 362 DPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLDFLAKMTN-GFSGADL 419
Query: 863 YALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDDFVKVLRELSPSL 914
+C A A + R+ +++ D V + D F + +R S+
Sbjct: 420 TEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 479
Query: 915 SMAELKKYELLRDQFEGS 932
S +++KYE+ + S
Sbjct: 480 SDNDIRKYEMFAQTLQQS 497
Score = 312 (114.9 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 72/197 (36%), Positives = 114/197 (57%)
Query: 717 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQM 776
GPE+++ GESE N+R F++A P +IF DELD++AP R + G V R+VSQ+
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 60
Query: 777 LAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 836
L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D + R +L+ T+
Sbjct: 61 LTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTK 118
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSV 896
KL +DV L + + + GAD+ ALC++A A ++K+ + +S+
Sbjct: 119 NMKLADDVDLEQVGNETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSL 177
Query: 897 VVEYDDFVKVLRELSPS 913
V DDF L + +PS
Sbjct: 178 AVTMDDFRWALSQSNPS 194
Score = 45 (20.9 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 428 YSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+S +M+ ++ + L +AF A+ +P I+ + + D
Sbjct: 1 FSGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 39
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 645 (232.1 bits), Expect = 3.8e-63, P = 3.8e-63
Identities = 201/644 (31%), Positives = 322/644 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ +P I+ + + D + + +V + S +
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLM 332
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K+ R V+++AA + + P +RR F E+ +G
Sbjct: 333 D-----------G---LKQ-----RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 373
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L Q+ +L D E+ + +T G + DL AL ++A IRK
Sbjct: 374 ATGRLEIL-QIHTKNMKLADDVDLEQ----VANETHGHVGADLAALCSEAALQAIRKKMD 428
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMG---KEDLVKAME---------RSKKRN 660
+D ++E ++++ +A D+ A +Q +E +V+ + KR
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 488
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
L + P+ H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPE
Sbjct: 489 LQEL--VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 546
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLA 778
L+ M+ GESE NVR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT 606
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DG++ + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK
Sbjct: 607 EMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKS 664
Query: 839 KLLE--DVSLYSIAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXR 889
+ + DV L +AK F+GAD+ +C A A + R+
Sbjct: 665 PVAKAGDVDLEFLAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 723
Query: 890 IDQADSVV-VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 932
+++ D V + D F + +R S+S +++KYE+ + S
Sbjct: 724 VEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 767
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 641 (230.7 bits), Expect = 1.2e-62, P = 1.2e-62
Identities = 185/581 (31%), Positives = 294/581 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 165 VEFKVIETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRE 221
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 281
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF A+ +P+I+ + + D ++ N +V + S + +
Sbjct: 282 AGESESNLRKAFEEAEKNAPSIIFIDEID---SIAPKREKTNGEV--ERRIVSQLLTLMD 336
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G +K R V+++ A + + P +RR F EI +G E
Sbjct: 337 -----------G---LKS-----RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 377
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E+L ++ +L D E KD T G++ DL AL +A IR+
Sbjct: 378 IGRLEVL-RIHTKNMKLAEDVDLERISKD----THGYVGADLAALCTEAALQCIREKMDV 432
Query: 616 VDKNEPG-ESDLTAKVA----H------NDNSSIAATQVMGKEDL----VKAMERSKKRN 660
+D + ++++ +A H N N S V+ ++ + +E K+
Sbjct: 433 IDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKREL 492
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
+ + P+ H + F G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGPE
Sbjct: 493 QETV---QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 549
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQML 777
L+ M+ GESE NVR+IF KAR + PCV+FFDELDS+A RG + GD GG DRV++Q+L
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL 609
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + + +FIIGA+NRPD+ID ALLRPGR D+L+Y+ + + S R + KA RK
Sbjct: 610 TEMDGMN-AKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKAALRK 667
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+ +DV + ++AK F+GAD+ +C A +A + +
Sbjct: 668 SPIAKDVDIGALAKYTQ-GFSGADITEICQRACKYAIRENI 707
Score = 448 (162.8 bits), Expect = 4.6e-39, P = 4.6e-39
Identities = 103/258 (39%), Positives = 150/258 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF S G++ G+LLYGPPG+GKTL+A+AVA E F +
Sbjct: 213 RKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G V R+VSQ
Sbjct: 273 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--NGEVERRIVSQ 330
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + +GV ++ R VL+ T
Sbjct: 331 LLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG-RLEVLRIHT 388
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L I+K + GAD+ ALC +A + K+ + +S
Sbjct: 389 KNMKLAEDVDLERISKDTH-GYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V + F L +PS
Sbjct: 448 MAVTNEHFHTALGNSNPS 465
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 641 (230.7 bits), Expect = 1.2e-62, P = 1.2e-62
Identities = 209/652 (32%), Positives = 322/652 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV V+P E ++ + T + G + + ++ G +D + +I
Sbjct: 172 VEFKVVEVDPEEIAIVAQD---TIIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIR 228
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +L++G PG GK + R VA G + +M+
Sbjct: 229 ELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSK 288
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ SP+I+ + + D ++ N +V V S +
Sbjct: 289 MAGESESNLRKAFEEAEKNSPSIIFIDEID---SIAPKRDKTNGEV--ERRVVSQLLTLM 343
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K R V+++AA + + P +RR F E+ +G
Sbjct: 344 D-----------G---MK-----ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPD 384
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
+ R+E+L ++ +L D E I +T GF+ D+ +L ++A IR+
Sbjct: 385 AEGRLEIL-RIHTKNMKLADDVDLEA----IASETHGFVGADIASLCSEAAMQQIREKMD 439
Query: 615 EVDKNEP----------GESDLTAKVA-HNDN-SSIAATQVMGKE---DLVKAMERSKKR 659
+D E G + + A N N S++ T V D + ++ K
Sbjct: 440 LIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNE 499
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+ + P+LH D + GL GVL +GPPGTGKTLLAKAVATE S NF+SVKGP
Sbjct: 500 LKETV---EYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGP 556
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQML 777
EL++M+ GESE N+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L
Sbjct: 557 ELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLL 616
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + +++F+IGA+NRPD IDPALLRPGR D+L+YV + D R +L+A R
Sbjct: 617 TEMDGMN-AKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEPARLSILQAQLRN 674
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADM-YALCADAWFHA-----AKRKVLXXXXXXXXXRID 891
L + L IAK F+GAD+ Y + A F A+ K+ + +
Sbjct: 675 TPLEPGLDLNEIAK-ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTE 733
Query: 892 QADSVV--VEYDD---------FVKVLRELSPSLSMAELKKYELLRDQFEGS 932
D V VE +D F + ++ S+S AEL++YE Q + S
Sbjct: 734 DVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 641 (230.7 bits), Expect = 1.2e-62, P = 1.2e-62
Identities = 209/652 (32%), Positives = 322/652 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV V+P E ++ + T + G + + ++ G +D + +I
Sbjct: 172 VEFKVVEVDPEEIAIVAQD---TIIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIR 228
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +L++G PG GK + R VA G + +M+
Sbjct: 229 ELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSK 288
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF A+ SP+I+ + + D ++ N +V V S +
Sbjct: 289 MAGESESNLRKAFEEAEKNSPSIIFIDEID---SIAPKRDKTNGEV--ERRVVSQLLTLM 343
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K R V+++AA + + P +RR F E+ +G
Sbjct: 344 D-----------G---MK-----ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPD 384
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
+ R+E+L ++ +L D E I +T GF+ D+ +L ++A IR+
Sbjct: 385 AEGRLEIL-RIHTKNMKLADDVDLEA----IASETHGFVGADIASLCSEAAMQQIREKMD 439
Query: 615 EVDKNEP----------GESDLTAKVA-HNDN-SSIAATQVMGKE---DLVKAMERSKKR 659
+D E G + + A N N S++ T V D + ++ K
Sbjct: 440 LIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNE 499
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+ + P+LH D + GL GVL +GPPGTGKTLLAKAVATE S NF+SVKGP
Sbjct: 500 LKETV---EYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGP 556
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQML 777
EL++M+ GESE N+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L
Sbjct: 557 ELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLL 616
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
E+DG+N + +++F+IGA+NRPD IDPALLRPGR D+L+YV + D R +L+A R
Sbjct: 617 TEMDGMN-AKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEPARLSILQAQLRN 674
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADM-YALCADAWFHA-----AKRKVLXXXXXXXXXRID 891
L + L IAK F+GAD+ Y + A F A+ K+ + +
Sbjct: 675 TPLEPGLDLNEIAK-ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTE 733
Query: 892 QADSVV--VEYDD---------FVKVLRELSPSLSMAELKKYELLRDQFEGS 932
D V VE +D F + ++ S+S AEL++YE Q + S
Sbjct: 734 DVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 639 (230.0 bits), Expect = 2.0e-62, P = 2.0e-62
Identities = 182/557 (32%), Positives = 284/557 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK V R VA G + +M+ ++ + L +AF A+ +P I
Sbjct: 243 ILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 302
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D + + +V + S + + G +K+
Sbjct: 303 IFIDELDA---IAPKREKTHGEV--ERRIVSQLLTLMD-----------G---LKQ---- 339
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
R V+++AA + + +RR F EI +G R+E+L Q+ +L+ D
Sbjct: 340 -RAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEIL-QIHTKNMKLSEDVD 397
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG-ESDLTAKVAHN-DN 635
E+ I +T G + DL AL ++A IRK + +D + ++DL +A D+
Sbjct: 398 LEQ----ISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDD 453
Query: 636 SSIAATQV--MGKEDLVKAMERSKKRNASALGAPK--------LPLLHKDLFSS-GLRKR 684
A +Q + V + + L K P+ + D F G+
Sbjct: 454 FKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPS 513
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVRD+F KAR A P
Sbjct: 514 RGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAP 573
Query: 745 CVIFFDELDSLAPARGA-SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
C++FFDELDS+A ARG +GD+GG DRV++Q+L E+DG+ + +++FIIGA+NRPD+ID
Sbjct: 574 CILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNK-KNVFIIGATNRPDIID 632
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
PA+LRPGR D+L+Y+ + D+ R +L+A RK + +DV L ++K F+GAD+
Sbjct: 633 PAILRPGRLDQLIYIPL-PDMPSRTAILRANLRKSPVAKDVDLMYLSK-ITEGFSGADLT 690
Query: 864 ALCADAWFHAAKRKVLXXXXXXXXXRI-------DQADSVV-VEYDDFVKVLRELSPSLS 915
+C A A + + + D D V + D F + +R S+S
Sbjct: 691 EICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVPEIRKDHFEEAMRFARRSVS 750
Query: 916 MAELKKYELLRDQFEGS 932
+++KYE+ + S
Sbjct: 751 DNDIRKYEMFAQTLQQS 767
Score = 440 (159.9 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 101/258 (39%), Positives = 152/258 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA E F +
Sbjct: 212 RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANETGAFFFLI 271
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DELD++AP R + G V R+VSQ
Sbjct: 272 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQ 329
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL + + ++ A+NRP+ +D AL R GRFD+ + +G+ D + R +L+ T
Sbjct: 330 LLTLMDGLKQRAH-VVVMAATNRPNSVDAALRRFGRFDREIDIGI-PDSTGRLEILQIHT 387
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L I+ + + GAD+ ALC++A A ++K+ D +S
Sbjct: 388 KNMKLSEDVDLEQISAETHGH-VGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNS 446
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V DDF L + +PS
Sbjct: 447 LAVTMDDFKWALSQSNPS 464
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 639 (230.0 bits), Expect = 2.0e-62, P = 2.0e-62
Identities = 190/575 (33%), Positives = 289/575 (50%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K VLL+G PG GK + R VA G + +M+ ++ +
Sbjct: 245 PQLFKSI-GIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 303
Query: 445 LAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
L +AF A+ SP I+ + + D ++ N +V V S + +
Sbjct: 304 LRKAFEEAEKNSPAIIFIDEID---SIAPKREKTNGEV--ERRVVSQLLTLMD------- 351
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEML 562
G +K R V+++AA + + P +RR F E+ +G R+E+L
Sbjct: 352 ----G---MK-----ARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 399
Query: 563 SQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEP- 621
Q+ +L D E+ I +T G++ D+ AL ++A IR+ +D +E
Sbjct: 400 -QIHTKNMKLGDDVDLEQ----IAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDT 454
Query: 622 --GES-DLTAKVAHNDNSSIAATQVMG-KEDLVKAMERSKKRNASALGAPK--------L 669
E D N ++ + +E V + + + L K
Sbjct: 455 IDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQY 514
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ H + F GL GVL YGPPGTGKT+LAKAVA EC+ NF+SVKGPEL++M+ GES
Sbjct: 515 PVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGES 574
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSS 787
E N+RDIF KAR+A PC++F DELDS+A ARG S GD+GG DRVV+Q+L E+DG+ S
Sbjct: 575 ESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMT-SK 633
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLY 847
+++F+IGA+NRP+ +DPAL RPGR D L+YV + ++ R +LKA RK + +DV L
Sbjct: 634 KNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG-RLSILKAQLRKTPVSDDVDLQ 692
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXR-------IDQ-ADSVVVE 899
IA K F+GAD+ + A A K + +D+ A+ V E
Sbjct: 693 YIANKTH-GFSGADLGFITQRAVKIAIKESITADINRTKALEAAGEDVPMDEDAEDPVPE 751
Query: 900 YDD--FVKVLRELSPSLSMAELKKYELLRDQFEGS 932
F + +++ S+S E+++YE Q + +
Sbjct: 752 LTKRHFEEAMQQARKSVSDVEIRRYEAFAQQMKNA 786
Score = 434 (157.8 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 105/275 (38%), Positives = 161/275 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF S G++ GVLLYGPPGTGKTL+A+AVA E F +
Sbjct: 228 RKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLI 287
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G V RVVSQ
Sbjct: 288 NGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQ 345
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ S ++ ++ A+NRP+ IDPAL R GRFD+ + +G+ D + R +L+ T
Sbjct: 346 LLTLMDGMKARS-NVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTGRLEILQIHT 403
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL +DV L IA + + G+D+ ALC++A + K+ + DS
Sbjct: 404 KNMKLGDDVDLEQIAAETH-GYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDS 462
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 930
+ V ++F L +PS ++ E+ E+ ++E
Sbjct: 463 LGVTMENFRFALGVSNPS-ALREVAVVEVPNVRWE 496
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 634 (228.2 bits), Expect = 7.7e-62, P = 7.7e-62
Identities = 187/632 (29%), Positives = 314/632 (49%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV +P E ++ +T + G D L G +D ++ +I
Sbjct: 160 VEFKVVETDPGEYCIV---APETFIHCEGEAVKREDEDRLDEVGYDDIGGVRKQLGQIRE 216
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PGCGK + R VA G + +M+
Sbjct: 217 LVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKL 276
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE 497
++ + L +AF A+ +P+I+ + + D ++ +V + S + +
Sbjct: 277 AGESESNLRKAFEEAEKNAPSIIFIDEID---SIAPKREKTQGEV--ERRIVSQLLTLMD 331
Query: 498 PSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTE 555
G +K R V+++ A + + P +RR F EI +
Sbjct: 332 -----------G---LKS-----RAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDA 372
Query: 556 QQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
R+E++ + + +T E V + +T G++ DL AL ++ IR+
Sbjct: 373 TGRLEIMR--IHTKNMKLDETVDLEAVAN---ETHGYVGADLAALCTESALQCIREKMDV 427
Query: 616 VD-KNEPGESDLTAKVAHNDN---SSIAATQVMGKEDLVKAMERSKKRNASALGAPK--- 668
+D ++E +++ ++ + +++ + + V + + + L K
Sbjct: 428 IDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKREL 487
Query: 669 -----LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 722
P+ H + F G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+
Sbjct: 488 RETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 547
Query: 723 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEID 781
M+ GESE NVR++F KAR A PCV+FFDELDS+A +RG+S GD+GG DRV++Q+L E+D
Sbjct: 548 MWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMD 607
Query: 782 GLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLL 841
G+N + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + D+ R +LKA K +
Sbjct: 608 GMN-AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PDLPSRVAILKACLNKSPVA 665
Query: 842 EDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV---- 897
+DV L + +K F+GAD+ +C A A R+ + R + D+ +
Sbjct: 666 KDVDLEFLGQKTQ-GFSGADLTEICQRAC-KLAIRESIEKDIESTKARQESGDTKMEDDS 723
Query: 898 ------VEYDDFVKVLRELSPSLSMAELKKYE 923
+ D F + +R S+S +++KYE
Sbjct: 724 VDPVPEITRDHFQEAMRSARRSVSDNDIRKYE 755
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 625 (225.1 bits), Expect = 8.5e-61, P = 8.5e-61
Identities = 176/499 (35%), Positives = 263/499 (52%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K +L++G PG GK + R VA G + +M+ ++ +
Sbjct: 248 PQLFKSI-GIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 306
Query: 445 LAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
L +AF A+ SP I+ + + D ++ N +V V S + +
Sbjct: 307 LRKAFEEAEKNSPAIIFIDEID---SIAPKREKTNGEV--ERRVVSQLLTLMD------- 354
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEML 562
G +K R V+++AA + + P +RR F E+ +G R+E+L
Sbjct: 355 ----G---MK-----ARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 563 SQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEP- 621
S + G + ++ I +T G++ DL +L ++A IR+ +D +E
Sbjct: 403 S-----IHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDT 457
Query: 622 --GES-DLTAKVAHN-------DNSS----IAATQVMGK--EDLVKAMERSKKRNASALG 665
E D N N S +A +V ED + +E K+ ++
Sbjct: 458 IDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWED-IGGLEEVKRELIESV- 515
Query: 666 APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 724
+ P+ H + F GL GVL YGPPGTGKT+LAKAVA EC+ NF+SVKGPEL++M+
Sbjct: 516 --QYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMW 573
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGL 783
GESE N+RDIF KAR+A PCV+F DELDS+A +RG S GD+GG DRVV+Q+L E+DG+
Sbjct: 574 FGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGM 633
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
S +++F+IGA+NRP+ +D AL+RPGR D L+YV + S RE +LKA RK + D
Sbjct: 634 T-SKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS-REGILKAQLRKTPVASD 691
Query: 844 VSLYSIAKKCPPNFTGADM 862
V + IA K F+GAD+
Sbjct: 692 VDIEFIASKTH-GFSGADL 709
Score = 540 (195.1 bits), Expect = 2.2e-49, P = 2.2e-49
Identities = 123/278 (44%), Positives = 170/278 (61%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ H + F GL GVL YGPPGTGKT+LAKAVA EC+ NF+SVKGPEL++M+ GES
Sbjct: 518 PVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGES 577
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSS 787
E N+RDIF KAR+A PCV+F DELDS+A +RG S GD+GG DRVV+Q+L E+DG+ S
Sbjct: 578 ESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMT-SK 636
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLY 847
+++F+IGA+NRP+ +D AL+RPGR D L+YV + S RE +LKA RK + DV +
Sbjct: 637 KNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS-REGILKAQLRKTPVASDVDIE 695
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD----- 902
IA K F+GAD+ + A A K + R + V +E ++
Sbjct: 696 FIASKTH-GFSGADLGFVTQRAVKLAIKESI-SAEIERQKQREAAGEDVKMEDEEEGEDP 753
Query: 903 --------FVKVLRELSPSLSMAELKKYELLRDQFEGS 932
F + ++ S+S E+++YE + S
Sbjct: 754 VPELTRAHFEEAMKTARRSVSDVEIRRYEAFAQSLKNS 791
Score = 433 (157.5 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 103/275 (37%), Positives = 161/275 (58%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF S G++ G+L+YGPPGTGKTL+A+AVA E F +
Sbjct: 231 RKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLI 290
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G V RVVSQ
Sbjct: 291 NGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQ 348
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DG+ S ++ ++ A+NRP+ IDPAL R GRFD+ + +G+ D + R +L T
Sbjct: 349 LLTLMDGMKARS-NVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTGRLEILSIHT 406
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L +IA + + G+D+ +LC++A + K+ + DS
Sbjct: 407 KNMKLGEDVDLETIAAETH-GYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDS 465
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 930
+ V ++F L +PS ++ E+ E+ ++E
Sbjct: 466 LGVTMENFRYALGVSNPS-ALREVAVVEVPNVRWE 499
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 596 (214.9 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 132/295 (44%), Positives = 191/295 (64%)
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
+E+ + +TSGF +L LV + +K E +K E DL K N +
Sbjct: 400 NEKLANHVAKKTSGFTLAELEKLVKNG-----KKVKIE-EKEEKVYEDLIDKRNSNFADA 453
Query: 638 IAATQVMGK--EDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGT 695
I A ++ ED V +E +K+ L + +LF S KRSG++LYG PG
Sbjct: 454 IGAPKIPNVRWED-VGGLEETKQT--------VLESIRTNLFGSRALKRSGIILYGSPGC 504
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSL 755
GKTL+AKAVATE + FLSVKGPEL+N Y+G+SE+N+R +F++A+ A PCVIFFDE+DSL
Sbjct: 505 GKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSL 564
Query: 756 APARGASGDSGGVMDRVVSQMLAEIDGLNDSS-QDLFIIGASNRPDLIDPALLRPGRFDK 814
AP RG +GDSGGV+DR+VSQ+LAE+D L++S +F++GA+NRPDL+D +L+ PGRFDK
Sbjct: 565 APNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDK 624
Query: 815 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
L+ V DV + ++L+A++RK + EDV L IA K +GA ++++ ++A
Sbjct: 625 LVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNA 679
Score = 48 (22.0 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K + +L+ G G GKR + R A + E + ++ + + A + A+
Sbjct: 256 KKALVLLVTGASGSGKRLMSRVFASETHRNFFEVDGYEMVCENASTSEAKWTSWWEKAKL 315
Query: 455 YSPTILLLRDFDV 467
+L +R+ +V
Sbjct: 316 LQNCVLFIRNSNV 328
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 618 (222.6 bits), Expect = 5.4e-60, P = 5.4e-60
Identities = 182/573 (31%), Positives = 291/573 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +P+ ++ + T + G I + L G +D ++ +I
Sbjct: 166 VEFKVVETDPAPACIVAPD---TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIK 222
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF + SP IL + + D + + +V + S +
Sbjct: 283 MSGESESNLRKAFAECEKNSPAILFIDEIDA---IAPKREKAHGEV--EKRIVSQLLTLM 337
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K R V+++AA + + +RR F EI +G
Sbjct: 338 D-----------G---LKT-----RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L + G + ++ + + GF+ DL +L ++A IR+
Sbjct: 379 AVGRLEILR-----IHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMGKED---LVKAMERSKKRNASALGA--- 666
+D +++ ++++ +A +N A MGK L +A+ + S +G
Sbjct: 434 LIDLEDDTIDAEVLNSLAVTMENFRFA----MGKSSPSALREAVVETPNTTWSDIGGLQN 489
Query: 667 --------PKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717
+ P+ H + + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KG
Sbjct: 490 VKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 549
Query: 718 PELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQM 776
PEL+ M+ GESE NVRD+F KAR+A PCV+FFDELDS+A ARG S GD+GG DRV++Q+
Sbjct: 550 PELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQV 609
Query: 777 LAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 836
L E+DG+N + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++ KA R
Sbjct: 610 LTEMDGMN-AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RLQIFKASLR 667
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
K L D+ L +AK F+GAD+ +C A
Sbjct: 668 KTPLSADLDLNFLAKNTV-GFSGADLTEICQRA 699
Score = 421 (153.3 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 96/258 (37%), Positives = 148/258 (57%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA E F +
Sbjct: 215 RKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F + P ++F DE+D++AP R + G V R+VSQ
Sbjct: 275 NGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HGEVEKRIVSQ 332
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL + + +I A+NRP+ ID AL R GRFD+ + +G+ V R +L+ T
Sbjct: 333 LLTLMDGLKTRAH-VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG-RLEILRIHT 390
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L +A +C F GAD+ +LC++A + K+ + +S
Sbjct: 391 KNMKLGEDVDLEQVANECH-GFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNS 449
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V ++F + + SPS
Sbjct: 450 LAVTMENFRFAMGKSSPS 467
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 618 (222.6 bits), Expect = 5.4e-60, P = 5.4e-60
Identities = 182/573 (31%), Positives = 291/573 (50%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +P+ ++ + T + G I + L G +D ++ +I
Sbjct: 166 VEFKVVETDPAPACIVAPD---TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIK 222
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
++ + L +AF + SP IL + + D + + +V + S +
Sbjct: 283 MSGESESNLRKAFAECEKNSPAILFIDEIDA---IAPKREKAHGEV--EKRIVSQLLTLM 337
Query: 497 EPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLT 554
+ G +K R V+++AA + + +RR F EI +G
Sbjct: 338 D-----------G---LKT-----RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
Query: 555 EQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
R+E+L + G + ++ + + GF+ DL +L ++A IR+
Sbjct: 379 AVGRLEILR-----IHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
Query: 615 EVD-KNEPGESDLTAKVAHN-DNSSIAATQVMGKED---LVKAMERSKKRNASALGA--- 666
+D +++ ++++ +A +N A MGK L +A+ + S +G
Sbjct: 434 LIDLEDDTIDAEVLNSLAVTMENFRFA----MGKSSPSALREAVVETPNTTWSDIGGLQN 489
Query: 667 --------PKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717
+ P+ H + + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KG
Sbjct: 490 VKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 549
Query: 718 PELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQM 776
PEL+ M+ GESE NVRD+F KAR+A PCV+FFDELDS+A ARG S GD+GG DRV++Q+
Sbjct: 550 PELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQV 609
Query: 777 LAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 836
L E+DG+N + +++FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++ KA R
Sbjct: 610 LTEMDGMN-AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RLQIFKASLR 667
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
K L D+ L +AK F+GAD+ +C A
Sbjct: 668 KTPLSADLDLNFLAKNTV-GFSGADLTEICQRA 699
Score = 421 (153.3 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 96/258 (37%), Positives = 148/258 (57%)
Query: 657 KKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+K+ A +LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA E F +
Sbjct: 215 RKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
GPE+++ GESE N+R F + P ++F DE+D++AP R + G V R+VSQ
Sbjct: 275 NGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HGEVEKRIVSQ 332
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835
+L +DGL + + +I A+NRP+ ID AL R GRFD+ + +G+ V R +L+ T
Sbjct: 333 LLTLMDGLKTRAH-VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG-RLEILRIHT 390
Query: 836 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS 895
+ KL EDV L +A +C F GAD+ +LC++A + K+ + +S
Sbjct: 391 KNMKLGEDVDLEQVANECH-GFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNS 449
Query: 896 VVVEYDDFVKVLRELSPS 913
+ V ++F + + SPS
Sbjct: 450 LAVTMENFRFAMGKSSPS 467
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 511 (184.9 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 116/267 (43%), Positives = 164/267 (61%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ +L+ G+ +GVL++GPPG GKTLLAKAVA E NF+S+KGPEL+N Y+GES
Sbjct: 541 PIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES 600
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
EK VR +FQ+AR++ PC+IFFDELD+L P R S RVV+ +L E+DGLND +
Sbjct: 601 EKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESS--SRVVNTLLTELDGLNDR-K 657
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK--LLEDVSL 846
+F+IGA+NRPD+IDPA+LRPGR DK LY+ + + R +LK L R L +V L
Sbjct: 658 GVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEE-RLEILKTLVRTSNSPLHANVDL 716
Query: 847 YSIAK--KCPPNFTGADMYALCADAWFHAAKR------KVLXXXXXXXXXRIDQADSVVV 898
+I++ +C NF+GAD+ +L +A A K+ K+ D + +
Sbjct: 717 NAISRDSRCG-NFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISI 775
Query: 899 EYDDFVKVLRELSPSLSMAELKKYELL 925
+DF L + PS+S + +YE L
Sbjct: 776 TAEDFDHALSSIRPSVSDRDRMRYEKL 802
Score = 397 (144.8 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 107/338 (31%), Positives = 174/338 (51%)
Query: 611 KSNSEVD--KNEPGE-SDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP 667
K++ E D NE G+ +D T + N + + + K+ K + + S+LG
Sbjct: 139 KTDGESDGVNNEEGQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNIDLSSLGGV 198
Query: 668 K-----------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+ LP+LH +++SS G+ GVLLYGPPG GKT +A A+A E + F+++
Sbjct: 199 ESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINI 258
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
P +++ GESEK +R+IF++A+ PC+IF DE+D++ P R G + R+V+Q
Sbjct: 259 SAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDG-GAQREMEKRIVAQ 317
Query: 776 MLAEIDGLN---DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 832
+L +D L + + +IGA+NRPD +D AL R GRFD+ + + V ++ R +LK
Sbjct: 318 LLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNE-EQRISILK 376
Query: 833 ALTRKFKLLEDVSL-YSIAKKCPPNFTGADMYALCADAWFHAAKR---KVLXXXXXXXXX 888
A+T+ KL Y K P + GAD+ +L A A KR +
Sbjct: 377 AMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESHSV 436
Query: 889 RIDQADSVVVEYD----DFVKVLRELSPSLSMAELKKY 922
+ D D+ V D D +K + S + ++ +KK+
Sbjct: 437 KDDSMDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKF 474
Score = 106 (42.4 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E+QR+ +L + + +
Sbjct: 327 LEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIK--- 383
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
+ G +++ T G++ DL +LV AG + I++ + +E E + K
Sbjct: 384 LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETM--SELQEESHSVKDDSM 441
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPL-LHKD 675
D ++ KED++K E+ K A L K L +H D
Sbjct: 442 DADPVSLDA--NKEDMIKKFEQ--KSEAEKLSTIKKFLNMHPD 480
Score = 105 (42.0 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 375 TVKILASILAPTLCPSVLS---LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T ++L I P L P + S ++ VLL+G PGCGK T+ +A L + + S
Sbjct: 202 TTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAP 261
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ L + F A+ +P ++ + + D
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEID 296
Score = 43 (20.2 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + + Y DFV L + PS
Sbjct: 485 EQLAPLAITYQDFVNALPSVQPS 507
Score = 41 (19.5 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 254 GTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQR 313
G KGS+ + + ++ KID + N +D + G V SV +I +P
Sbjct: 163 GNKRKAKGSAKTQLKKQKRKIDYSTPN---ID-LSSLGGVESVTTQ--LLEIIGLPI--- 213
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLR--VNCTKTALV--LGGSIPSALPPDLLISGSNDFV 369
LH IY VEP +L C KT + L G + P + IS +
Sbjct: 214 LHPE----IYSST-GVEPPRGVLLYGPPGCGKTTIANALAGELKV---PFINISAPSVVS 265
Query: 370 PLQGDTVKILASIL--APTLCPSVL 392
+ G++ K L I A + P ++
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLI 290
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 511 (184.9 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 116/267 (43%), Positives = 164/267 (61%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ +L+ G+ +GVL++GPPG GKTLLAKAVA E NF+S+KGPEL+N Y+GES
Sbjct: 541 PIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES 600
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
EK VR +FQ+AR++ PC+IFFDELD+L P R S RVV+ +L E+DGLND +
Sbjct: 601 EKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESS--SRVVNTLLTELDGLNDR-K 657
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK--LLEDVSL 846
+F+IGA+NRPD+IDPA+LRPGR DK LY+ + + R +LK L R L +V L
Sbjct: 658 GVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEE-RLEILKTLVRTSNSPLHANVDL 716
Query: 847 YSIAK--KCPPNFTGADMYALCADAWFHAAKR------KVLXXXXXXXXXRIDQADSVVV 898
+I++ +C NF+GAD+ +L +A A K+ K+ D + +
Sbjct: 717 NAISRDSRCG-NFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISI 775
Query: 899 EYDDFVKVLRELSPSLSMAELKKYELL 925
+DF L + PS+S + +YE L
Sbjct: 776 TAEDFDHALSSIRPSVSDRDRMRYEKL 802
Score = 397 (144.8 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 107/338 (31%), Positives = 174/338 (51%)
Query: 611 KSNSEVD--KNEPGE-SDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP 667
K++ E D NE G+ +D T + N + + + K+ K + + S+LG
Sbjct: 139 KTDGESDGVNNEEGQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNIDLSSLGGV 198
Query: 668 K-----------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715
+ LP+LH +++SS G+ GVLLYGPPG GKT +A A+A E + F+++
Sbjct: 199 ESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINI 258
Query: 716 KGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 775
P +++ GESEK +R+IF++A+ PC+IF DE+D++ P R G + R+V+Q
Sbjct: 259 SAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDG-GAQREMEKRIVAQ 317
Query: 776 MLAEIDGLN---DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 832
+L +D L + + +IGA+NRPD +D AL R GRFD+ + + V ++ R +LK
Sbjct: 318 LLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNE-EQRISILK 376
Query: 833 ALTRKFKLLEDVSL-YSIAKKCPPNFTGADMYALCADAWFHAAKR---KVLXXXXXXXXX 888
A+T+ KL Y K P + GAD+ +L A A KR +
Sbjct: 377 AMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESHSV 436
Query: 889 RIDQADSVVVEYD----DFVKVLRELSPSLSMAELKKY 922
+ D D+ V D D +K + S + ++ +KK+
Sbjct: 437 KDDSMDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKF 474
Score = 106 (42.4 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E+QR+ +L + + +
Sbjct: 327 LEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIK--- 383
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
+ G +++ T G++ DL +LV AG + I++ + +E E + K
Sbjct: 384 LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETM--SELQEESHSVKDDSM 441
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPL-LHKD 675
D ++ KED++K E+ K A L K L +H D
Sbjct: 442 DADPVSLDA--NKEDMIKKFEQ--KSEAEKLSTIKKFLNMHPD 480
Score = 105 (42.0 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 375 TVKILASILAPTLCPSVLS---LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T ++L I P L P + S ++ VLL+G PGCGK T+ +A L + + S
Sbjct: 202 TTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAP 261
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ L + F A+ +P ++ + + D
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEID 296
Score = 43 (20.2 bits), Expect = 8.4e-33, Sum P(2) = 8.4e-33
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + + Y DFV L + PS
Sbjct: 485 EQLAPLAITYQDFVNALPSVQPS 507
Score = 41 (19.5 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 254 GTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQR 313
G KGS+ + + ++ KID + N +D + G V SV +I +P
Sbjct: 163 GNKRKAKGSAKTQLKKQKRKIDYSTPN---ID-LSSLGGVESVTTQ--LLEIIGLPI--- 213
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLR--VNCTKTALV--LGGSIPSALPPDLLISGSNDFV 369
LH IY VEP +L C KT + L G + P + IS +
Sbjct: 214 LHPE----IYSST-GVEPPRGVLLYGPPGCGKTTIANALAGELKV---PFINISAPSVVS 265
Query: 370 PLQGDTVKILASIL--APTLCPSVL 392
+ G++ K L I A + P ++
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLI 290
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 499 (180.7 bits), Expect = 5.2e-58, Sum P(2) = 5.2e-58
Identities = 117/264 (44%), Positives = 169/264 (64%)
Query: 670 PLLHKDLFSS-GLRKR-SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
P+ D F++ G+ R G+LL GPPG GKTLLAKAVA E +NF+SVKGPEL+NMY+GE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
SE+ VR +FQ+AR ++PCVIFFDE+D+L P R SGG R+V+Q+L E+DG+ +
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGV-EGR 668
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDV 844
Q +F+IGA+NRPD++D A+LRPGR DK+L+V S V R +L+ T+ + L ED+
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPS-VEDRVDILRKSTKNGTRPMLGEDI 727
Query: 845 SLYSIAKKCPP--NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 902
+ IA+ P FTGAD+ AL ++ A + +VL + V + +
Sbjct: 728 DFHEIAQ-LPELAGFTGADLAALIHESSLLALQARVLEND--------ESVKGVGMRH-- 776
Query: 903 FVKVLRELSPSLSMAELKKYELLR 926
F + + PS++ A+ KKYE ++
Sbjct: 777 FREAASRIRPSVTEADRKKYEHMK 800
Score = 189 (71.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 674 KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 733
K + G+ G +++GPPG GKT+ A+AVA E ++ L + EL++ GE+E+ +R
Sbjct: 229 KTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIR 288
Query: 734 DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
+F A+ PC++ D++D++AP R + + RVVSQ+ + +D L
Sbjct: 289 RLFDTAKQNSPCILILDDIDAIAPRRETAQRE--MERRVVSQLCSSLDEL 336
Score = 171 (65.3 bits), Expect = 5.2e-58, Sum P(2) = 5.2e-58
Identities = 67/259 (25%), Positives = 117/259 (45%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
++HG PGCGK + VA L I +++ + L++ +T + + F+TA+ SP IL
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCIL 302
Query: 461 LLRDFDVF--RNLVSNESLPNDQVGLSSEVASVIREFTEPSAED--EDEESHG----YFP 512
+L D D R + + V S++ S + E P E +D+ + G
Sbjct: 303 ILDDIDAIAPRRETAQREMERRVV---SQLCSSLDELVLPPREKPLKDQLTFGDDGSVAI 359
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVS 570
+ + VL++ + + +RR F +EIS+G E R ++L ++ +
Sbjct: 360 IGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV-- 417
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLI-RKSNSEVDKNEPGESDLTAK 629
L D +K I T G++ DL AL+ +A I R ++ V KNE G +LT +
Sbjct: 418 NLAGDVT----LKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE-GHKNLTVE 472
Query: 630 VAHNDNSSIAATQVMGKED 648
+ + A + G +D
Sbjct: 473 QIKEELDRVLAW-LQGDDD 490
Score = 135 (52.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IG ++RPD +D L R GRF+ + +G+ D + RE++L+ + K L DV+L I
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGI-PDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 850 AKKCPPNFTGADMYALCADA 869
AK P + GAD+ AL +A
Sbjct: 429 AK-LTPGYVGADLQALIREA 447
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 499 (180.7 bits), Expect = 5.2e-58, Sum P(2) = 5.2e-58
Identities = 117/264 (44%), Positives = 169/264 (64%)
Query: 670 PLLHKDLFSS-GLRKR-SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
P+ D F++ G+ R G+LL GPPG GKTLLAKAVA E +NF+SVKGPEL+NMY+GE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
SE+ VR +FQ+AR ++PCVIFFDE+D+L P R SGG R+V+Q+L E+DG+ +
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGV-EGR 668
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDV 844
Q +F+IGA+NRPD++D A+LRPGR DK+L+V S V R +L+ T+ + L ED+
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPS-VEDRVDILRKSTKNGTRPMLGEDI 727
Query: 845 SLYSIAKKCPP--NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 902
+ IA+ P FTGAD+ AL ++ A + +VL + V + +
Sbjct: 728 DFHEIAQ-LPELAGFTGADLAALIHESSLLALQARVLEND--------ESVKGVGMRH-- 776
Query: 903 FVKVLRELSPSLSMAELKKYELLR 926
F + + PS++ A+ KKYE ++
Sbjct: 777 FREAASRIRPSVTEADRKKYEHMK 800
Score = 189 (71.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 674 KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 733
K + G+ G +++GPPG GKT+ A+AVA E ++ L + EL++ GE+E+ +R
Sbjct: 229 KTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIR 288
Query: 734 DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
+F A+ PC++ D++D++AP R + + RVVSQ+ + +D L
Sbjct: 289 RLFDTAKQNSPCILILDDIDAIAPRRETAQRE--MERRVVSQLCSSLDEL 336
Score = 171 (65.3 bits), Expect = 5.2e-58, Sum P(2) = 5.2e-58
Identities = 67/259 (25%), Positives = 117/259 (45%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
++HG PGCGK + VA L I +++ + L++ +T + + F+TA+ SP IL
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCIL 302
Query: 461 LLRDFDVF--RNLVSNESLPNDQVGLSSEVASVIREFTEPSAED--EDEESHG----YFP 512
+L D D R + + V S++ S + E P E +D+ + G
Sbjct: 303 ILDDIDAIAPRRETAQREMERRVV---SQLCSSLDELVLPPREKPLKDQLTFGDDGSVAI 359
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVS 570
+ + VL++ + + +RR F +EIS+G E R ++L ++ +
Sbjct: 360 IGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV-- 417
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLI-RKSNSEVDKNEPGESDLTAK 629
L D +K I T G++ DL AL+ +A I R ++ V KNE G +LT +
Sbjct: 418 NLAGDVT----LKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE-GHKNLTVE 472
Query: 630 VAHNDNSSIAATQVMGKED 648
+ + A + G +D
Sbjct: 473 QIKEELDRVLAW-LQGDDD 490
Score = 135 (52.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IG ++RPD +D L R GRF+ + +G+ D + RE++L+ + K L DV+L I
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGI-PDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 850 AKKCPPNFTGADMYALCADA 869
AK P + GAD+ AL +A
Sbjct: 429 AK-LTPGYVGADLQALIREA 447
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 532 (192.3 bits), Expect = 5.6e-58, Sum P(3) = 5.6e-58
Identities = 124/283 (43%), Positives = 174/283 (61%)
Query: 648 DLVKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D + A+E+ ++ A+ AP K P + + L GL SGVLL GPPG GKTLLAKA+A
Sbjct: 662 DDIGALEKIREELKLAVLAPVKYPEMLERL---GLTAPSGVLLCGPPGCGKTLLAKAIAN 718
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
E +NF+SVKGPEL+NMY+GESE+ VR FQ+AR++ PCVIFFDE DSL P R GD
Sbjct: 719 EAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGN 778
Query: 767 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 826
R+V+Q+L E+DG+ + + ++I+ A+NRPD+IDPA+LRPGR D +LYVG + S
Sbjct: 779 NSGTRIVNQLLTEMDGVEER-KGVYILAATNRPDIIDPAILRPGRLDTILYVGF-PEQSE 836
Query: 827 RERVLKALTRKFK---LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXX 883
R +LKA T+ K L +DV L IA + +TGAD+ L A + ++ +
Sbjct: 837 RTEILKATTKNGKRPVLADDVDLDEIAAQTE-GYTGADLAGLVKQASMFSLRQSLNNGDT 895
Query: 884 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLR 926
D + V F + L++L PS++ + K Y+ LR
Sbjct: 896 --------NLDDLCVRSQHFQEALQQLRPSVNEQDRKIYDKLR 930
Score = 319 (117.4 bits), Expect = 8.5e-25, P = 8.5e-25
Identities = 103/340 (30%), Positives = 171/340 (50%)
Query: 552 PLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK-DIIGQTSGFMPRDLHALVADAGANLIR 610
P T + L +L++ V E+ +++ K + I +S + LH +V + NL
Sbjct: 149 PPTPAVQGSALKRLMEEVPEIA--VAAKKVAKPNTIHVSSSEAIQKLHQVVGNRAKNLSE 206
Query: 611 KS--NSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP- 667
+ S+ +N PG L ++ H + S + K DL R+ + +
Sbjct: 207 DAVPRSKDHRNVPG---LYQQL-HQNQSRDRLRKF--KRDLEVQHPTESFRDIGGMDSTL 260
Query: 668 -KL--PLLH-KD---LFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
+L L+H K F GL G+LL+GPPG GKT LA+A++ + + + + EL
Sbjct: 261 KELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATEL 320
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG-ASGDSGGVMDRVVSQMLAE 779
I GESE+ +R++F +A PCV+F DE+D++ R AS D + R+VSQ+++
Sbjct: 321 IGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKD---MERRIVSQLISS 377
Query: 780 IDGL--NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
+D L N+ Q + +I A+ RPD++DP L R GRFD + + + S RE +L+
Sbjct: 378 LDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERRE-ILRIQCEG 436
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+ ++ IA+ P + GAD+ AL + A A KR+
Sbjct: 437 LSVDPKLNYDKIAE-LTPGYVGADLMALVSRAASVAVKRR 475
Score = 105 (42.0 bits), Expect = 5.6e-58, Sum P(3) = 5.6e-58
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 375 TVKILASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T+K L +L P L L +LLHG PGCGK + R ++ +L + ++E
Sbjct: 259 TLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPAT 318
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
L+ ++ + + F+ A YSP +L + + D
Sbjct: 319 ELIGGISGESEERIREVFDQAIGYSPCVLFIDEID 353
Score = 76 (31.8 bits), Expect = 5.6e-58, Sum P(3) = 5.6e-58
Identities = 32/120 (26%), Positives = 60/120 (50%)
Query: 522 QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSE 579
Q V+++AA + L P +RR F HEI++ + ++R E+L +Q L+ D
Sbjct: 388 QSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILR--IQ-CEGLSVDP-KL 443
Query: 580 EFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV--DKNEPGESDLTAKVAHNDNSS 637
+ K I T G++ DL ALV+ A + +++ + + + + E ++T +D S
Sbjct: 444 NYDK-IAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPS 502
Score = 54 (24.1 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 611 KSNSEVDKNEPGESDL-TAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPK 668
K S DK+E ++ T K A N NSSI + Q K+ K + + + A PK
Sbjct: 532 KETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPK 590
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 516 (186.7 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 120/264 (45%), Positives = 167/264 (63%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + + F + GL +G+LL GPPG GKTLLAKAVA LNF+SVKGPEL+NMY+GES
Sbjct: 539 PIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGES 598
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +FQ+ R++ PCVIFFDE+D+L P R + +SG + RVV+Q+L E+DG+ + Q
Sbjct: 599 ERAVRQVFQRGRNSAPCVIFFDEIDALCPRR-SEHESGASV-RVVNQLLTEMDGMENRRQ 656
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVS 845
+FI+ A+NRPD+IDPA+LRPGR DK LYVG+ + R +L +T+ K +L DVS
Sbjct: 657 -VFIMAATNRPDIIDPAVLRPGRLDKTLYVGL-PPAADRHAILNTITKGGTKPQLDSDVS 714
Query: 846 LYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
L IA +C FTGAD+ AL +A +A L + A + V F
Sbjct: 715 LEEIAHDARCE-TFTGADLSALVREACVNA-----LRVHLDPAQTHTESAKDIRVSRVHF 768
Query: 904 VKVLRELSPSLSMAELKKYELLRD 927
+++ PS+S + YE LR+
Sbjct: 769 EDAFKKVRPSVSKKDQLMYERLRE 792
Score = 407 (148.3 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 86/210 (40%), Positives = 134/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ G LL+GPPG GKTLLA+AVA E +L L + PEL++ GESE+
Sbjct: 248 HPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQK 307
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ--D 789
+R++F++A S+ PC++F DE+D++ P R + S + R+V+Q+L +D LN +
Sbjct: 308 LRELFEQAISSAPCILFIDEIDAITPKRETA--SKDMERRIVAQLLTCMDDLNSMLEPAQ 365
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ D R ++LK L RK +L +D +
Sbjct: 366 VLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEGARMKILKTLCRKIRLPDDFDFRHL 424
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A+ P + GAD+ ALC +A +A R +L
Sbjct: 425 AR-LTPGYVGADLMALCREAAMNAVNRILL 453
Score = 96 (38.9 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
LLHG PGCGK + + VA + +++ S L++ ++ L + F A S +P IL
Sbjct: 264 LLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCIL 323
Query: 461 LLRDFD 466
+ + D
Sbjct: 324 FIDEID 329
Score = 89 (36.4 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
QVL++ A + + L P +RR F EI +G E R+++L L + + L D +
Sbjct: 365 QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKI-RLPDDF---D 420
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRK 611
F + + T G++ DL AL +A N + +
Sbjct: 421 F-RHLARLTPGYVGADLMALCREAAMNAVNR 450
Score = 47 (21.6 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 451 TAQSYSPTILLLRDFDVFRNLVSNESLPNDQVG----LSSEVAS-VIREFTEPSAEDE 503
T +PT+ L R D+ ++ VS L DQ+ L S+ +S ++R +PSA+ E
Sbjct: 457 TEDQITPTLALARLLDLLKSSVS---LSEDQLAALCVLMSDFSSSLVR--VQPSAKRE 509
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 531 (192.0 bits), Expect = 1.5e-57, Sum P(4) = 1.5e-57
Identities = 127/283 (44%), Positives = 182/283 (64%)
Query: 650 VKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
V A+E ++ A+ AP + + + F + GL +GVLL GPPG GKTLLAKAVA E
Sbjct: 582 VGALEDIREELTMAILAP---VRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANES 638
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
LNF+SVKGPEL+NMY+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G
Sbjct: 639 GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGA 696
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R
Sbjct: 697 SVRVVNQLLTEMDGL-ETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RV 754
Query: 829 RVLKALTR---KFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXX 883
+LK +T+ K L EDV L +IA +C +TGAD+ AL +A A ++++
Sbjct: 755 AILKTITKNGTKPPLDEDVDLEAIANDHRCDC-YTGADLSALVREASLCALRQEITGQKN 813
Query: 884 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLR 926
I A+ + V + F + R++ PS+S+ + + YE L+
Sbjct: 814 G-----IGTAE-LTVSHKHFEEAFRKVKPSISVKDQRMYEALQ 850
Score = 404 (147.3 bits), Expect = 2.8e-33, Sum P(3) = 2.8e-33
Identities = 87/210 (41%), Positives = 133/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+RD+F +A S PC++F DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 345 LRDLFDQAVSNAPCIVFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATAR 402
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ ++GA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L E + +
Sbjct: 403 VLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEAS-RERILQTLCRKLRLPETFNFSHL 461
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A P F GAD+ ALC +A A R ++
Sbjct: 462 AH-LTPGFVGADLMALCREAAVCAVHRVLM 490
Score = 96 (38.9 bits), Expect = 1.5e-57, Sum P(4) = 1.5e-57
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L F+ A S +P I
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCI 359
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 360 VFIDEID 366
Score = 72 (30.4 bits), Expect = 1.5e-57, Sum P(4) = 1.5e-57
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL+V A + + L P +RR F E+ +G E R +L L + + +T +
Sbjct: 402 RVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQTLCRKLR--LPETFNFS 459
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRK---SNSEVDKNEP 621
+ + T GF+ DL AL +A + + E + EP
Sbjct: 460 HLAHL---TPGFVGADLMALCREAAVCAVHRVLMRRQEQQRTEP 500
Score = 45 (20.9 bits), Expect = 2.8e-33, Sum P(3) = 2.8e-33
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L E+ PS
Sbjct: 543 EQMQGLCLELNDFIVALSEVQPS 565
Score = 39 (18.8 bits), Expect = 1.5e-57, Sum P(4) = 1.5e-57
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 119 AETTKQRIAQVVVLDP---PTTRKQVCDGDVHSKH 150
A++T+ +I+ V D T K+VC +H +H
Sbjct: 251 AKSTELQISSVKFEDVGGNDATLKEVCKMLIHMRH 285
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 512 (185.3 bits), Expect = 1.9e-57, Sum P(4) = 1.9e-57
Identities = 122/293 (41%), Positives = 173/293 (59%)
Query: 650 VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
V A++R + A+ P K P L++ + G+ GVLL+GPPG GKTLLAKAVA E
Sbjct: 535 VGALQRVRLELNMAIVQPIKRPELYEKV---GISAPGGVLLWGPPGCGKTLLAKAVANES 591
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
NF+S+KGPEL+N Y+GESE+++R +F +AR++ PCVIFFDELD+L P R S
Sbjct: 592 RANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESS- 650
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
RVV+ +L E+DGLND + +F+IGA+NRPD+IDPA+LRPGR DK L++ + + +
Sbjct: 651 -SRVVNTLLTELDGLNDR-RGIFVIGATNRPDMIDPAMLRPGRLDKSLFIEL-PNTEEKL 707
Query: 829 RVLKALTRKF--KLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXX 884
++K LT+ L DV I + KC NF+GAD+ AL ++ A KRK
Sbjct: 708 DIIKTLTKSHGTPLSSDVDFEEIIRNEKCN-NFSGADLAALVRESSVLALKRKFFQSEEI 766
Query: 885 XXXXRID------------QADSVVVEYDDFVKVLRELSPSLSMAELKKYELL 925
D + ++V DF LR++ PS+S + KY+ L
Sbjct: 767 QSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKYDRL 819
Score = 404 (147.3 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 88/212 (41%), Positives = 132/212 (62%)
Query: 669 LPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+LH ++F S+G+ GVLL+GPPG GKT +A A+A E + F+S+ P +++ GE
Sbjct: 223 LPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGE 282
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN--- 784
SEK +RD+F +ARS PC++FFDE+D++ P R G + R+V+Q+L +D L
Sbjct: 283 SEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDG-GAQREMERRIVAQLLTSMDELTMEK 341
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + + IIGA+NRPD +D AL R GRFD+ + + V ++VS R +LK ++ K+ +
Sbjct: 342 TNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVS-RLHILKKMSDNLKIDGAI 400
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+AK P F GAD+ AL A A KR
Sbjct: 401 DFAKLAK-LTPGFVGADLKALVTAAGTCAIKR 431
Score = 100 (40.3 bits), Expect = 1.9e-57, Sum P(4) = 1.9e-57
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 374 DTVKILASILA-PTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429
D V L ++ P L P + LS VLLHG PGCGK ++ +A L + + S
Sbjct: 212 DVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISIS 271
Query: 430 CHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ + F+ A+S +P ++ + D
Sbjct: 272 APSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEID 308
Score = 89 (36.4 bits), Expect = 1.9e-57, Sum P(4) = 1.9e-57
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E R+ +L ++ L
Sbjct: 339 MEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSD---NLK 395
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
D G+ +F K + T GF+ DL ALV AG I++ + + TA +
Sbjct: 396 ID-GAIDFAK-LAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIK--STPTTATDSSE 451
Query: 634 DNSSIAATQVMGKEDLVK 651
DN I T G E +K
Sbjct: 452 DNMEIDET-ANGDESSLK 468
Score = 45 (20.9 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + ++Y+DF+K L + P+
Sbjct: 496 EQLSLLSIKYEDFLKALPTIQPT 518
Score = 39 (18.8 bits), Expect = 1.9e-57, Sum P(4) = 1.9e-57
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 266 EAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCS 303
E + +E D+ +F D L G++F+ C+ + S
Sbjct: 48 ENNEGEEDEDIFESMFFAKD--LTAGEIFTFCLTKDLS 83
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 528 (190.9 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 120/262 (45%), Positives = 169/262 (64%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + D F + GL +G+LL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GES
Sbjct: 599 PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q
Sbjct: 659 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-ETRQ 715
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVS 845
+FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L EDV+
Sbjct: 716 QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RVAILKTITKNGTKPPLDEDVN 774
Query: 846 LYSIAKKCPPN-FTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +IA N +TGAD+ AL +A A ++++ A + V + F
Sbjct: 775 LETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVG------AGELKVSHKHFE 828
Query: 905 KVLRELSPSLSMAELKKYELLR 926
+++ PS+S+ + YE L+
Sbjct: 829 DAFKKVKPSISIKDQVMYEALQ 850
Score = 402 (146.6 bits), Expect = 7.4e-33, Sum P(2) = 7.4e-33
Identities = 100/260 (38%), Positives = 154/260 (59%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F +A S PC++F DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 345 LRELFDQAVSNAPCIVFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATAR 402
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ D + RER+L+ L RK +L E + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGI-PDEAARERILQTLCRKLRLPETFNFCHL 461
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRE 909
A P F GAD+ ALC +A A R VL + + + + E D ++ E
Sbjct: 462 AH-LTPGFVGADLMALCREAAMCAVNR-VLMKQQAQQKKK-PEIEGLPSEGDQEERLGAE 518
Query: 910 LSPSLSMAELKKY-ELLRDQ 928
+ S + EL++ LLRDQ
Sbjct: 519 PT-SETQDELQRLLGLLRDQ 537
Score = 98 (39.6 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F+ A S +P I
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCI 359
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 360 VFIDEID 366
Score = 64 (27.6 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F E+ +G E R +L L + + +T +
Sbjct: 402 RVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLR--LPETFN-- 457
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEP 621
F + T GF+ DL AL +A N + K +P
Sbjct: 458 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKP 500
Score = 39 (18.8 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 58 VGDDVSPSLQLPAGILRFSKDKIDISDAKFXXXXXXXXXXXXTCVLKQLSVTSGSLVLVK 117
+ DD S S + + I + SD K T L+++ +L+ K
Sbjct: 189 LSDDQSNSKKQDSEIQILKDSSLLESDKKRKGRAKGKGNKRKTENLQEVDGEIEALLQKK 248
Query: 118 -NAETTKQRIAQVVVLDP---PTTRKQVCDGDVHSKH 150
A +T+ +I+ V D T K+VC +H +H
Sbjct: 249 AKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRH 285
Score = 38 (18.4 bits), Expect = 8.0e-54, Sum P(4) = 8.0e-54
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 483 GLSSEVASVIREFTEPSAEDEDE 505
GL SE R EP++E +DE
Sbjct: 504 GLPSEGDQEERLGAEPTSETQDE 526
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 505 (182.8 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 118/264 (44%), Positives = 170/264 (64%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GES
Sbjct: 483 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 542
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q
Sbjct: 543 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-EARQ 599
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVS 845
+FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L DV+
Sbjct: 600 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLDADVN 658
Query: 846 LYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
L +IA +C +TGAD+ AL +A A ++++ ++ + V + F
Sbjct: 659 LEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVSHKHF 711
Query: 904 VKVLRELSPSLSMAELKKYELLRD 927
+ +++ S+S + YE L++
Sbjct: 712 EEAFKKVRSSISKKDQIMYERLQE 735
Score = 401 (146.2 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 87/210 (41%), Positives = 133/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+
Sbjct: 169 HPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 228
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 229 LRELFEQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATAR 286
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +
Sbjct: 287 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHL 345
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A P F GAD+ ALC +A A R ++
Sbjct: 346 AH-LTPGFVGADLMALCREAAMCAVNRVLM 374
Score = 98 (39.6 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 184 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 243
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 244 IFIDEID 250
Score = 80 (33.2 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 286 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 341
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 342 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 392
Score = 42 (19.8 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L + PS
Sbjct: 427 EQMQGLCIELNDFIVALSSVQPS 449
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 581 (209.6 bits), Expect = 7.5e-56, P = 7.5e-56
Identities = 171/519 (32%), Positives = 275/519 (52%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVA----VLLHGLPGCGKRTVVRYVARRLGIHVV 426
L + + ++I P P++ S F V+ +LLHG PG GK ++R VA HV+
Sbjct: 250 LDKEIESLKSAIEIPLHQPTLFS-SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVL 308
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVG-LS 485
+ ++++ +T AAL FN A+ Y P+I+ + + D ++ N + ND G +
Sbjct: 309 TINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEID---SIAPNRA--NDDSGEVE 363
Query: 486 SEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC-- 543
S V + + + + G +V+++AA + + P +RR
Sbjct: 364 SRVVATLLTLMDGMG------AAG-------------KVVVIAATNRPNSVDPALRRPGR 404
Query: 544 FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG--SEEFVKDIIGQTSGFMPRDLHALV 601
F E+ +G R ++L++ S ++SD E +K I +T G++ DL AL
Sbjct: 405 FDQEVEIGIPDVDARFDILTKQF---SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALC 461
Query: 602 ADAGANLIRK---SNSEVDKNEPGESDLTAKVAHNDNSSIAATQV---MGK---EDLVKA 652
++ I++ +++ +DK + + A D A ++ M K D +
Sbjct: 462 RESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSD-IGG 520
Query: 653 MERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 711
E K + + +LPL + F+ G+ GVLLYGPPG KTL AKA+ATE +N
Sbjct: 521 QEELKTKMKEMI---QLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGIN 577
Query: 712 FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR 771
FL+VKGPE+ N Y+GESE+ +R+IF+KARSA P +IFFDE+D+L+P R G S +
Sbjct: 578 FLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDR--DGSSTSAANH 635
Query: 772 VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL 831
V++ +L EIDG+ + + + I+ A+NRPD ID ALLRPGR D+ +YVG DV+ R +L
Sbjct: 636 VLTSLLNEIDGVEEL-KGVVIVAATNRPDEIDAALLRPGRLDRHIYVGP-PDVNARLEIL 693
Query: 832 KALTRKFKLLED-VSLYSIAKKCPPNFTGADMYALCADA 869
K T+KF E V L+ +A + ++GA++ LC +A
Sbjct: 694 KKCTKKFNTEESGVDLHELADRTE-GYSGAEVVLLCQEA 731
Score = 188 (71.2 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 102/422 (24%), Positives = 174/422 (41%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG--S 578
+V+++AA + + P +RR F E+ +G R ++L++ S ++SD
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQF---SRMSSDRHVLD 438
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRK---SNSEVDKNEPGESDLTAKVAHND- 634
E +K I +T G++ DL AL ++ I++ +++ +DK + KV D
Sbjct: 439 SEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDK-------FSLKVTLKDV 491
Query: 635 NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPG 694
S++ + ++ +E K + G +L K++ L G
Sbjct: 492 ESAMVDIRPSAMREIF--LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISA 549
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK--ARSARPCVIFFDEL 752
LL +L ++ IN + +IF K S R F +
Sbjct: 550 PKGVLLYGPPGCSKTLTAKALATESGINFLAVKGP----EIFNKYVGESERAIREIFRKA 605
Query: 753 DSLAPA-------RGASGDSGGVMDRVVSQMLAEIDGLNDSSQDL---FIIGASNRPDLI 802
S AP+ S D G + +L + D ++L I+ A+NRPD I
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEI 665
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED-VSLYSIAKKCPPNFTGAD 861
D ALLRPGR D+ +YVG DV+ R +LK T+KF E V L+ +A + ++GA+
Sbjct: 666 DAALLRPGRLDRHIYVGP-PDVNARLEILKKCTKKFNTEESGVDLHELADRTE-GYSGAE 723
Query: 862 MYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKK 921
+ LC +A A ++ D VE F K + ++ ++ L
Sbjct: 724 VVLLCQEAGLAAI---------------MEDLDVAKVELRHFEKAFKGIARGITPEMLSY 768
Query: 922 YE 923
YE
Sbjct: 769 YE 770
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 511 (184.9 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 125/283 (44%), Positives = 178/283 (62%)
Query: 650 VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
+ A+E ++ A+ AP + P K L GL +GVLL GPPG GKTLLAKAVA E
Sbjct: 583 IGALEDVREELTMAILAPVRNPEQFKAL---GLTTPAGVLLAGPPGCGKTLLAKAVANES 639
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
LNF+SVKGPEL+NMY+GESE+ VR +FQ+AR++ PCVIFFDE+D+L P R + +SG
Sbjct: 640 GLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRR-SDRESGAS 698
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
+ RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+IDPA+LRPGR DK LYVG+ R
Sbjct: 699 V-RVVNQLLTEMDGL-ENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPED-RL 755
Query: 829 RVLKALTR---KFKLLEDVSLYSIA--KKCPPNFTGADMYALCADAWFHAAKRKVLXXXX 883
+LK +T+ + L DV+L IA ++C +TGAD+ AL +A A ++++
Sbjct: 756 AILKTITKDGTRPPLDTDVNLEEIAYSQQCDC-YTGADLSALVREASICALRQEMALPTT 814
Query: 884 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLR 926
+ + + F + R++ S+S + YE LR
Sbjct: 815 KSKKEK----GEIKISRKHFEEAFRKVKSSVSKKDQIMYEELR 853
Score = 373 (136.4 bits), Expect = 7.5e-30, Sum P(3) = 7.5e-30
Identities = 81/200 (40%), Positives = 125/200 (62%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ G LL+GPPG GKTLLA+A+A E L L V E+++ GESE+
Sbjct: 281 HPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQK 340
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F +A PCV+F DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 341 LRELFDQAVLNAPCVLFIDEIDAITPKREVA--SKDMERRIVAQLLTCLDDLNNVAATAQ 398
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ D + RE++L+ L RK KL +
Sbjct: 399 VLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEAAREKILQTLCRKLKLPGSFDFLHL 457
Query: 850 AKKCPPNFTGADMYALCADA 869
A P + GAD+ ALC +A
Sbjct: 458 AH-LTPGYVGADLMALCREA 476
Score = 93 (37.8 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 345 ALVLGGSIPSALPPDLLISGSNDFVPLQG--DTVKILASILAPTLCPSV---LSLKFRVA 399
+++L G + S P L S F + G +T+K + +L P V L +
Sbjct: 238 SILLKGKVKSKGPE--LYHPSVKFEDVGGNDETLKEICKMLIHVRHPEVYLHLGVVPPRG 295
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
LLHG PGCGK + + +A L + +++ + +++ ++ L + F+ A +P +
Sbjct: 296 FLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCV 355
Query: 460 LLLRDFD 466
L + + D
Sbjct: 356 LFIDEID 362
Score = 81 (33.6 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
QVL++ A + + L P +RR F EI +G E R ++L L + + +L GS +
Sbjct: 398 QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKL-KLP---GSFD 453
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
F+ + T G++ DL AL +A N + + E + TA+ + +
Sbjct: 454 FLH-LAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQRKYVQAGGNTAEESVGIETE 512
Query: 638 IAAT----QVMGKEDLVKAMERSKKRN 660
I Q+ KE+L + + KK++
Sbjct: 513 IPVEENTKQLPSKEELQRLLYLLKKQD 539
Score = 46 (21.3 bits), Expect = 7.5e-30, Sum P(3) = 7.5e-30
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
DQ + +E +DF+ L + PS
Sbjct: 544 DQLQKLCIEMNDFIVALSSVQPS 566
Score = 39 (18.8 bits), Expect = 7.5e-30, Sum P(3) = 7.5e-30
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 594 PRDLHALVADAGA-NLIRKSNSE----VDKNEPGESDLTAKVAHNDNSSIAATQV 643
P DL ++ L +K N + KNEP E+ + A ++ A+QV
Sbjct: 110 PEDLSTNHMNSSLMTLYKKGNPDSAPATPKNEPMETSTPVQTAPQTSTLSPASQV 164
Score = 38 (18.4 bits), Expect = 9.5e-30, Sum P(3) = 9.5e-30
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 616 VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKK 658
+D +E GE D ++ ++ + + K+ K +R K+
Sbjct: 186 IDLSEDGEGDEKKLISEQKSTEFSVLESEKKKTKGKRAKRKKE 228
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 501 (181.4 bits), Expect = 3.2e-55, Sum P(4) = 3.2e-55
Identities = 118/262 (45%), Positives = 165/262 (62%)
Query: 671 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 729
L + D F GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GESE
Sbjct: 600 LCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 659
Query: 730 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD 789
+ VR +FQ+A+++ PCVIFFDE+D+L P R A V RVV+Q+L E+DGL ++ Q
Sbjct: 660 RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGL-ETRQQ 716
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVSL 846
+FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L DV+L
Sbjct: 717 VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLDADVNL 775
Query: 847 YSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
+IA +C +TGAD+ AL +A A K+++ + + + F
Sbjct: 776 EAIAGDLRCDC-YTGADLSALVREASICALKQEMARQKSGS------EKGELKISQKHFE 828
Query: 905 KVLRELSPSLSMAELKKYELLR 926
+ +++ S+S + YE L+
Sbjct: 829 EAFKKVKSSISKEDRAMYEALQ 850
Score = 396 (144.5 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 86/210 (40%), Positives = 133/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V E+++ GESE+
Sbjct: 285 HPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQK 344
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F++A S+ PC++F DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 345 LRELFEQAVSSAPCILFIDEIDAITPKREIA--SKDMERRIVAQLLTCMDDLNNVAATAR 402
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L E +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPETFHFRHL 461
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A P F GAD+ ALC +A A R ++
Sbjct: 462 AH-LTPGFVGADLMALCREAAMCAVNRVLM 490
Score = 101 (40.6 bits), Expect = 3.2e-55, Sum P(4) = 3.2e-55
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + + R VLLHG PGCGK + +A L +
Sbjct: 267 GGND-TTLK-EVCKMLVHMRHPEVYHHLGVIPPR-GVLLHGPPGCGKTLLAHAIAGELDL 323
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P IL + + D
Sbjct: 324 PILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEID 366
Score = 77 (32.2 bits), Expect = 3.2e-55, Sum P(4) = 3.2e-55
Identities = 36/152 (23%), Positives = 61/152 (40%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 402 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 455
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIA 639
F + + T GF+ DL AL +A + + E+ ++ A + D
Sbjct: 456 FHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHKKNPEIEASPSEGDQEERT 515
Query: 640 ATQVMGK--EDLVKAMERSKKRNASALGAPKL 669
+ K E+L + + RN L +L
Sbjct: 516 GAEPTSKTQEELQRLL--GLLRNQDPLSEEQL 545
Score = 44 (20.5 bits), Expect = 3.2e-55, Sum P(4) = 3.2e-55
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAED 269
P+ A+H+ S + + G L+S+ + +E ++
Sbjct: 112 PQSANHMNSSLLSLYRKGNLDSVSSTPEMEQKE 144
Score = 41 (19.5 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L + PS
Sbjct: 543 EQLKGLCIELNDFIVALSSVQPS 565
Score = 41 (19.5 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 136 TTRKQVCDGDVHSKH 150
TT K+VC VH +H
Sbjct: 271 TTLKEVCKMLVHMRH 285
Score = 40 (19.1 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 165 QDDMELLDRQV-AYLSPLL-AFNLDLHISSLKF 195
++D++ +D ++ A L A L+L ISS+KF
Sbjct: 231 KEDLQEVDGEIEAVLQKRAKAKGLELQISSVKF 263
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 505 (182.8 bits), Expect = 5.5e-55, Sum P(4) = 5.5e-55
Identities = 118/264 (44%), Positives = 170/264 (64%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GES
Sbjct: 600 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 659
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q
Sbjct: 660 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-EARQ 716
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVS 845
+FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L DV+
Sbjct: 717 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLDADVN 775
Query: 846 LYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
L +IA +C +TGAD+ AL +A A ++++ ++ + V + F
Sbjct: 776 LEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVSHKHF 828
Query: 904 VKVLRELSPSLSMAELKKYELLRD 927
+ +++ S+S + YE L++
Sbjct: 829 EEAFKKVRSSISKKDQIMYERLQE 852
Score = 401 (146.2 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 87/210 (41%), Positives = 133/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+
Sbjct: 286 HPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 345
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 346 LRELFEQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATAR 403
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +
Sbjct: 404 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHL 462
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A P F GAD+ ALC +A A R ++
Sbjct: 463 AH-LTPGFVGADLMALCREAAMCAVNRVLM 491
Score = 98 (39.6 bits), Expect = 5.5e-55, Sum P(4) = 5.5e-55
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 301 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 360
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 361 IFIDEID 367
Score = 80 (33.2 bits), Expect = 5.5e-55, Sum P(4) = 5.5e-55
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 403 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 458
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 459 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 509
Score = 42 (19.8 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L + PS
Sbjct: 544 EQMQGLCIELNDFIVALSSVQPS 566
Score = 37 (18.1 bits), Expect = 5.5e-55, Sum P(4) = 5.5e-55
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQ 271
P+ A+H+ S + + G +S+ S+ E E R+
Sbjct: 113 PQSANHMNSSLLSLYRKGNPDSV--SNTPEMEQRE 145
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 525 (189.9 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 136/377 (36%), Positives = 205/377 (54%)
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKV 630
+L SD E D+ ++ +P D H+ + R N+ D P E + A
Sbjct: 411 DLNSDPRFNELDSDMALDSNDSLPLD-HSSIIQ------RYLNAHPDPLSPEELEPLAIC 463
Query: 631 AHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKL--------PLLHKDLFSS-GL 681
+ ++A Q K + + N AL + ++ P+ +L+ S G+
Sbjct: 464 PQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGI 523
Query: 682 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 741
+GVLL+GPPG GKTLLAKAVA E NF+S++GPEL+N Y+GESE+ VR +F +AR+
Sbjct: 524 SAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARA 583
Query: 742 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 801
+ PCVIFFDELD++ P R S RVV+ +L E+DGL+D S +++I A+NRPD+
Sbjct: 584 SSPCVIFFDELDAMVPRRDDSLSEAS--SRVVNTLLTELDGLSDRS-GVYVIAATNRPDI 640
Query: 802 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAK--KCPPNFTG 859
IDPA+LRPGR DK L V + D R +LK LT++ L E+V+L + + +C NF+G
Sbjct: 641 IDPAMLRPGRLDKTLLVDL-PDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCS-NFSG 698
Query: 860 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQ---ADSVVVEYDDFVKVLRELSPSLSM 916
AD+ AL +A A R + I Q + + V DF + + PS+S
Sbjct: 699 ADLAALVREAAV-TALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFKNIKPSVSD 757
Query: 917 AELKKYELLRDQFEGSS 933
+ +KY+ L ++ +S
Sbjct: 758 RDRQKYQRLAKRWSSAS 774
Score = 388 (141.6 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 83/212 (39%), Positives = 133/212 (62%)
Query: 669 LPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
+P+ H +++ +G+ GVLL+GPPG GKT+LA A+A E + F+S+ P +++ GE
Sbjct: 192 MPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGE 251
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
SEK VR++F++A+S PC++F DE+D++ P R ++ + R+V+Q L +D L+
Sbjct: 252 SEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQRE--MERRIVAQFLTCMDELSFEK 309
Query: 788 QD---LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
D + +IGA+NRPD +D AL R GRFD+ + + V S + RE++L+ + + KL D
Sbjct: 310 TDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDA-REKILRTMAKGLKLSGDF 368
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+AK+ P + GAD+ AL A A A KR
Sbjct: 369 DFRQLAKQTP-GYVGADLKALTAAAGIIAIKR 399
Score = 108 (43.1 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A LG+ + S ++++ ++ + + F A+S +P +
Sbjct: 211 VLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCL 270
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 271 MFIDEID 277
Score = 92 (37.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 517 EKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTS 574
EK + VL++ A + + L +RR F EI + ++ R ++L + + + +L+
Sbjct: 308 EKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGL-KLSG 366
Query: 575 DTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV------DKN-EPGESDLT 627
D + K QT G++ DL AL A AG I++ +E+ D N +P ++L
Sbjct: 367 DFDFRQLAK----QTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNELD 422
Query: 628 AKVAHNDNSSI 638
+ +A + N S+
Sbjct: 423 SDMALDSNDSL 433
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 539 (194.8 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 138/361 (38%), Positives = 209/361 (57%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+V+++AA + + +RR EI +G + R++++ LL V +D E
Sbjct: 415 KVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLE- 473
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAA 640
D+ +T ++ DL A+V +A I+++ S + K+ G D+ V D+ A
Sbjct: 474 ---DLASRTHAYVGADLAAVVREAALRAIKRTIS-LQKDTSG-LDIFGAV-QMDDLEFAL 527
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAP-----KL------PLLHKDLFSS-GLRKRSGVL 688
+ V + + + M S + S +G KL PL H + FS G+R GVL
Sbjct: 528 SSVR-QSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVL 586
Query: 689 LYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIF 748
LYGPPG KT+ AKA+ATE LNF++VKGPEL + ++GESE+ VR +FQKAR A P VIF
Sbjct: 587 LYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIF 646
Query: 749 FDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLR 808
FDE+D+L RG S DRVV+ +L E+DG+ ++ +++ ++ A+NRPD+IDPAL+R
Sbjct: 647 FDEIDALTANRGEDNSS----DRVVAALLNELDGI-EALRNVLVLAATNRPDMIDPALMR 701
Query: 809 PGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCAD 868
PGR D+LLYVG + R++++K K K EDV L IA+K +GA++ ALC +
Sbjct: 702 PGRLDRLLYVGP-PNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTE-GCSGAEVVALCQE 759
Query: 869 A 869
A
Sbjct: 760 A 760
Score = 356 (130.4 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 79/213 (37%), Positives = 126/213 (59%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP + +LF + GVLLYGPPGTGKT++ +AVA E + ++ GP ++ Y+G
Sbjct: 296 ELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLG 355
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
E+E +R IF+ AR+ +P +IF DE+D+LAP R + D R V+ +L +DG+ ++
Sbjct: 356 ETESRLRKIFEDARAHQPSIIFIDEIDALAPKR--TEDVSEAESRAVATLLTLLDGMANA 413
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF-KLLEDVS 845
+ + +I A+NRP+ ID AL RPGR +K + +G+ D S R ++K L + D
Sbjct: 414 GK-VVVIAATNRPNSIDEALRRPGRLEKEIEIGI-PDKSARLDIIKLLLSGVPNEINDAQ 471
Query: 846 LYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
L +A + + GAD+ A+ +A A KR +
Sbjct: 472 LEDLASRTHA-YVGADLAAVVREAALRAIKRTI 503
Score = 87 (35.7 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK V+R VA V +++ +T + L + F A+++ P+I
Sbjct: 316 VLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSI 375
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 376 IFIDEID 382
Score = 63 (27.2 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 481 QVGLSSEVASVIREFTEPSA-EDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPT 539
+VG SS+ + + E +EP A ED DE S G + VKEI I L+ A +D S P
Sbjct: 174 EVG-SSQSSPSVNE-SEPKATEDLDELSPGSYKVKEIH-IRSPSNLIEAISDMSLDEPRI 230
Query: 540 IRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+ F+ SM E + ++L + ++ + GSEE
Sbjct: 231 YK--FTAASSM----EIETPDLLKLPHEDRTQSAYNQGSEE 265
Score = 41 (19.5 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 177 YLSPLLAFNLDLHISSLKFLVHQGKEVL 204
+LSP L L S + +L H+G E +
Sbjct: 25 FLSPAALNRLKLSPSQVIYLKHKGGEAV 52
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 503 (182.1 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 123/283 (43%), Positives = 178/283 (62%)
Query: 650 VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
+ A+E ++ A+ AP + P + L GL +GVLL GPPG GKTLLAKAVA E
Sbjct: 582 IGALEDIREELTMAILAPVRSPEQFRAL---GLMTPAGVLLAGPPGCGKTLLAKAVANES 638
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
LNF+SVKGPEL+NMY+GESE+ VR +FQ+ARS+ PCVIFFDE+D+L P R S G
Sbjct: 639 GLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRR--SDRETGA 696
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R
Sbjct: 697 SVRVVNQLLTEMDGL-EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RL 754
Query: 829 RVLKALTR---KFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXX 883
+LK +T+ + L DV+L ++A +C ++GAD+ AL +A A +++++
Sbjct: 755 AILKTITKNGTRPPLDADVNLEALAADLRCDC-YSGADLSALVREASICALRQEMMRPKG 813
Query: 884 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLR 926
D+ + + V F + +++ S+S + YE LR
Sbjct: 814 GG-----DRGE-LKVSQKHFEEAFKKVKSSISKKDQVMYEALR 850
Score = 391 (142.7 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 85/196 (43%), Positives = 125/196 (63%)
Query: 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 745
GVLL+GPPG GKTLLA A+A E L L V E+++ GESE+ +R++F++A S PC
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 746 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLID 803
V+F DE+D++ P R + S + R+V+Q+L +D LN ++ + +IGA+NRPD +D
Sbjct: 354 VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLD 411
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
PAL R GRFD+ + +G+ + S RER+L+ L RK +L E +A P F GAD+
Sbjct: 412 PALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPETFPFRHLAH-LTPGFVGADLM 469
Query: 864 ALCADAWFHAAKRKVL 879
ALC +A A R ++
Sbjct: 470 ALCREAAMCAVSRVLM 485
Score = 100 (40.3 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + ++ R VLLHG PGCGK + +A L +
Sbjct: 262 GGND-ATLK-EVCKMLIHMRHPEVYHHLGAVPPR-GVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P +L + + D
Sbjct: 319 PILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 74 (31.1 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 450
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
F + + T GF+ DL AL +A + + + + +P + ++
Sbjct: 451 FPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPEM 497
Score = 42 (19.8 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E++DF L + PS
Sbjct: 543 EQLQGLCIEWNDFTVALSSVQPS 565
Score = 37 (18.1 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDL 276
P+ A+H+ S + + G +S+ +S E E R+ + +
Sbjct: 113 PQVANHMNSSLLSLYRKGHPDSV--TSTPEMEPRETTVSV 150
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 545 (196.9 bits), Expect = 5.2e-54, Sum P(2) = 5.2e-54
Identities = 127/292 (43%), Positives = 182/292 (62%)
Query: 648 DLVKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D V A+ ++ +++ P + P +K++ G+ +GVL+YGPPG GKTLLAKA+A+
Sbjct: 566 DDVGALSGVREELTNSILRPIRYPKKYKNM---GIDSPAGVLMYGPPGCGKTLLAKAIAS 622
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
EC NF+SVKGPEL+N Y+GESE+ VR +FQ+A ++ PCVIFFDE D+LAP RG GD G
Sbjct: 623 ECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGG-GDGG 681
Query: 767 G--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 824
G +RVV+Q+L E+DGL S+ +FII A+NRPD+ID A+ RPGR DK++YV + S
Sbjct: 682 GNQATERVVNQLLTEMDGLEKRSE-VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPE 740
Query: 825 SYRERVLKALTRKFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXX 882
R +LK LT K + +DV L + +C +F+GAD+ L +A HA R
Sbjct: 741 E-RCEILKTLTHKIPIHQDVDLIKVGTDLRCH-SFSGADLSLLVKEAANHAISR------ 792
Query: 883 XXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN 934
+ D+V +E DF+ L ++ PS+S +K EL+ D+ N
Sbjct: 793 --GFDNNSTEPDTVTME--DFIFALSKIKPSVS----RKDELMYDKLNNDIN 836
Score = 233 (87.1 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 51/132 (38%), Positives = 80/132 (60%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ H +++S G+ G+LL+GP G GKTLLAKA+A E + ++ E+ + GES
Sbjct: 235 PICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGES 294
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E VR +F A + PC+IF DE+D++AP R ++ S + R+VSQ+L +D LN S
Sbjct: 295 EARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESA--SKDMERRIVSQLLTCMDSLNYLSS 352
Query: 789 DLFIIGASNRPD 800
+ ++N P+
Sbjct: 353 N----NSTNEPN 360
Score = 130 (50.8 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 784 NDSSQD-LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
ND + + +IGA+NRP+ +D AL GRFDK + +G+ D + R ++LK +T K +L
Sbjct: 396 NDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGI-PDQTARCKILKVITSKMRLEN 454
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ IA P + GAD+ L +A ++ R
Sbjct: 455 NFDYEEIAT-LTPGYVGADINLLVKEAATNSVNR 487
Score = 84 (34.6 bits), Expect = 5.2e-54, Sum P(2) = 5.2e-54
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG GCGK + + +A L + + S + + ++ A + F+ A + +P I
Sbjct: 253 ILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCI 312
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 313 IFIDEID 319
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 591 (213.1 bits), Expect = 7.0e-54, Sum P(2) = 7.0e-54
Identities = 176/493 (35%), Positives = 257/493 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVAR----RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSY 455
VLL G G GK T+ + + + RL HV C L + +AF A
Sbjct: 603 VLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWR 662
Query: 456 SPTILLLRDFDVFRNLVSNESLPND-QVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514
P+I+LL D D + N + SS +A V+++ +K
Sbjct: 663 QPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDL-----------------IK 705
Query: 515 EIEKICRQQVLLVAAADSSEGLPPT--------IRRCFSHEISMGPLTEQQRVEMLSQLL 566
E+ + + L+A + S L P+ I +CF + P ++QR EML ++
Sbjct: 706 EVISL-GSLIALIATSQSEHALHPSLVSAQGTHIFQCF--KCIQSP-DQKQRCEMLCSVI 761
Query: 567 QPVSELTSDTG--SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGES 624
+ ++L D S+ ++ + +T GF+ RD LV A I N+ E S
Sbjct: 762 K--NKLNCDVKKFSDLDLQYVAKETEGFVARDFTMLVDRAIHACISNQNA-FQHGELNLS 818
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLVKAMERS---KKRNASALGAPKLPLLHKDLFSS-G 680
+ + A D + +A V + +R K + LP + +LF++
Sbjct: 819 TVDFQKALKDFTPLALRNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLP 878
Query: 681 LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKAR 740
+R+RSGVLLYG PGTGKTLLA VA E +NF+SVKGPEL++ YIG SE+ VRDIF +A+
Sbjct: 879 IRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQ 938
Query: 741 SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD 800
+A+PC++FFDE DS+AP RG D+ GV DRVV+Q+L ++DG+ + Q ++++ A++RPD
Sbjct: 939 AAKPCIVFFDEFDSIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAATSRPD 995
Query: 801 LIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGA 860
LIDPALLRPGR DK LY D S R +LKAL+ L DV L +A K +FTGA
Sbjct: 996 LIDPALLRPGRLDKCLYCPP-PDQSSRCEILKALSHSLSLANDVDLEYLAAKTE-HFTGA 1053
Query: 861 DMYALCADAWFHA 873
D+ AL +A A
Sbjct: 1054 DLKALLYNAQLEA 1066
Score = 44 (20.5 bits), Expect = 7.0e-54, Sum P(2) = 7.0e-54
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 894 DSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 930
+++++ + L + PS+S + K + L D F+
Sbjct: 1233 NTLIITQSHLMTALEGIRPSISQDDWKNFTELYDNFQ 1269
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 587 (211.7 bits), Expect = 7.9e-54, P = 7.9e-54
Identities = 176/516 (34%), Positives = 272/516 (52%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR----RLGIHVV 426
L+ T +L L+ L V L+ A+LL G G GK T+ + + + +L HV
Sbjct: 567 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVE 625
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS---NESLPN--DQ 481
C L L AF+ A P+++LL D D+ L + +E P+
Sbjct: 626 RVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQS 685
Query: 482 VGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIR 541
L+ + +I+EF S G V I QQ L S++G+ I
Sbjct: 686 QRLAHALNDMIKEFI----------SMGSL-VALIATSQSQQSLHPLLV-SAQGVH--IF 731
Query: 542 RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+C H + P ++QR E+L +++ + + ++ ++ + +T GF+ RD LV
Sbjct: 732 QCVQH---IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 788
Query: 602 ADA-GANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV--KAMERSKK 658
A + L R+S S +K D + +S+ + + DL K +
Sbjct: 789 DRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEV 848
Query: 659 RNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717
R + +LP + +LF++ +R+R+G+LLYGPPGTGKTLLA +A E +NF+SVKG
Sbjct: 849 RQI-LMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG 907
Query: 718 PELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQML 777
PEL++ YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L
Sbjct: 908 PELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLL 965
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+
Sbjct: 966 TQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDS 1023
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 873
L +DV L +A +FTGAD+ AL +A A
Sbjct: 1024 LPLADDVDLQHVAS-VTDSFTGADLKALLYNAQLEA 1058
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 587 (211.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 176/516 (34%), Positives = 272/516 (52%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR----RLGIHVV 426
L+ T +L L+ L V L+ A+LL G G GK T+ + + + +L HV
Sbjct: 245 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVE 303
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS---NESLPN--DQ 481
C L L AF+ A P+++LL D D+ L + +E P+
Sbjct: 304 RVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQS 363
Query: 482 VGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIR 541
L+ + +I+EF S G V I QQ L S++G+ I
Sbjct: 364 QRLAHALNDMIKEFI----------SMGSL-VALIATSQSQQSLHPLLV-SAQGVH--IF 409
Query: 542 RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+C H + P ++QR E+L +++ + + ++ ++ + +T GF+ RD LV
Sbjct: 410 QCVQH---IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 466
Query: 602 ADA-GANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV--KAMERSKK 658
A + L R+S S +K D + +S+ + + DL K +
Sbjct: 467 DRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEV 526
Query: 659 RNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717
R + +LP + +LF++ +R+R+G+LLYGPPGTGKTLLA +A E +NF+SVKG
Sbjct: 527 RQI-LMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG 585
Query: 718 PELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQML 777
PEL++ YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L
Sbjct: 586 PELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLL 643
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+
Sbjct: 644 TQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDS 701
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 873
L +DV L +A +FTGAD+ AL +A A
Sbjct: 702 LPLADDVDLQHVAS-VTDSFTGADLKALLYNAQLEA 736
Score = 37 (18.1 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 227 KLGLQSVGQLP 237
KLGL + GQ+P
Sbjct: 83 KLGLSNGGQIP 93
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 505 (182.8 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 118/264 (44%), Positives = 170/264 (64%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GES
Sbjct: 324 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 383
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q
Sbjct: 384 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-EARQ 440
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVS 845
+FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L DV+
Sbjct: 441 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLDADVN 499
Query: 846 LYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
L +IA +C +TGAD+ AL +A A ++++ ++ + V + F
Sbjct: 500 LEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVSHKHF 552
Query: 904 VKVLRELSPSLSMAELKKYELLRD 927
+ +++ S+S + YE L++
Sbjct: 553 EEAFKKVRSSISKKDQIMYERLQE 576
Score = 321 (118.1 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 76/211 (36%), Positives = 121/211 (57%)
Query: 672 LHKDLFSSGLRKRSGVLL-YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEK 730
LH L GL ++ Y G + + + E L L V PE+++ GESE+
Sbjct: 11 LHMQLL--GLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQ 68
Query: 731 NVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQ 788
+R++F++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 69 KLRELFEQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATA 126
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L +
Sbjct: 127 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCH 185
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
+A P F GAD+ ALC +A A R ++
Sbjct: 186 LAH-LTPGFVGADLMALCREAAMCAVNRVLM 215
Score = 80 (33.2 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 127 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 182
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 183 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 233
Score = 42 (19.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L + PS
Sbjct: 268 EQMQGLCIELNDFIVALSSVQPS 290
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 494 (179.0 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 114/236 (48%), Positives = 160/236 (67%)
Query: 650 VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
+ A+E ++ A+ AP + P + L GL +GVLL GPPG GKTLLAKAVA E
Sbjct: 577 IGALEDIREELTMAILAPVRSPEQFRAL---GLMTPAGVLLAGPPGCGKTLLAKAVANES 633
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
LNF+SVKGPEL+NMY+GESE+ VR +FQ+ARS+ PCVIFFDE+D+L P R S G
Sbjct: 634 GLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRR--SDRETGA 691
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R
Sbjct: 692 SVRVVNQLLTEMDGL-EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RL 749
Query: 829 RVLKALTR---KFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVL 879
+LK +T+ + L DV+L ++A +C ++GAD+ AL +A A +++++
Sbjct: 750 AILKTITKNGTRPPLDADVNLEALAADLRCDC-YSGADLSALVREASICALRQEMM 804
Score = 391 (142.7 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 85/196 (43%), Positives = 125/196 (63%)
Query: 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 745
GVLL+GPPG GKTLLA A+A E L L V E+++ GESE+ +R++F++A S PC
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 746 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLID 803
V+F DE+D++ P R + S + R+V+Q+L +D LN ++ + +IGA+NRPD +D
Sbjct: 354 VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLD 411
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
PAL R GRFD+ + +G+ + S RER+L+ L RK +L E +A P F GAD+
Sbjct: 412 PALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPETFPFRHLAH-LTPGFVGADLM 469
Query: 864 ALCADAWFHAAKRKVL 879
ALC +A A R ++
Sbjct: 470 ALCREAAMCAVSRVLM 485
Score = 100 (40.3 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + ++ R VLLHG PGCGK + +A L +
Sbjct: 262 GGND-ATLK-EVCKMLIHMRHPEVYHHLGAVPPR-GVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P +L + + D
Sbjct: 319 PILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 74 (31.1 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 450
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
F + + T GF+ DL AL +A + + + + +P + ++
Sbjct: 451 FPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPEM 497
Score = 42 (19.8 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E++DF L + PS
Sbjct: 538 EQLQGLCIEWNDFTVALSSVQPS 560
Score = 37 (18.1 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDL 276
P+ A+H+ S + + G +S+ +S E E R+ + +
Sbjct: 113 PQVANHMNSSLLSLYRKGHPDSV--TSTPEMEPRETTVSV 150
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 574 (207.1 bits), Expect = 5.1e-53, P = 5.1e-53
Identities = 163/487 (33%), Positives = 259/487 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D E N+ VAS++ +E S G
Sbjct: 450 IFIDELDAL--CPKREGAQNEVE--KRVVASLLTLMDGIGSEG----SEG---------- 491
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
QVL++ A + L +RR F EI +G R+++L +LLQ V L ++
Sbjct: 492 ---QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVPHLLTEV- 547
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKS-NSEVDKNEPGESDLTAKVAHND-- 634
E ++ + G++ DL AL +AG +R+ N + + ++ + L K+ ND
Sbjct: 548 --ELLQ-LANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLV-KITLNDFL 603
Query: 635 ---N----SSIAATQV----MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF-SSGLR 682
N S++ + + D + +E K + A+ + PL H + F G++
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSD-IGGLENIKLKLKQAV---EWPLKHPESFIRMGIQ 659
Query: 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 742
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 743 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I+ A+NRPD I
Sbjct: 720 SPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGI-EQLKDVTILAATNRPDRI 778
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
D AL+RPGR D+++YV + D + R +L + DV+L + + ++GA++
Sbjct: 779 DKALMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNDVNLDELIFQTD-TYSGAEI 836
Query: 863 YALCADA 869
A+C +A
Sbjct: 837 IAVCREA 843
Score = 414 (150.8 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 98/255 (38%), Positives = 146/255 (57%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ GVLLYGPPGTGKT++A+AVA E + GPE+I+ + G
Sbjct: 370 ELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYG 429
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
E+E +R IF +A P +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 430 ETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSE 487
Query: 787 SQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + ++GA+NRP +D AL RPGRFDK + +GV + + + K L R LL +V
Sbjct: 488 GSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVPHLLTEV 547
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A + GAD+ ALC +A +A +R VL ++ A V + +DF+
Sbjct: 548 ELLQLANSAH-GYVGADLKALCNEAGLYALRR-VLNKQPNLSDSKM--AGLVKITLNDFL 603
Query: 905 KVLRELSPSLSMAEL 919
+ + ++ PS +M E+
Sbjct: 604 QGMNDIRPS-AMREV 617
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 579 (208.9 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 200/641 (31%), Positives = 305/641 (47%)
Query: 317 RSDNIIYFKVVAVEPS-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDT 375
+SDN+++ + V + + E + + +T G S PD IS P+ D
Sbjct: 518 KSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGVS------PD--ISSLTWMGPIVSDV 569
Query: 376 VKILASILAPTLCPSVLSLKFRVA----VLLHGLPGCGKRTVVRYVARR------LGIHV 425
+K + +L+P + KF++ +L++G PG GK + R A+ L HV
Sbjct: 570 IKRMTVLLSPAA--GMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHV 627
Query: 426 VEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLS 485
+ SC L + L+ ++P++++L D D +++S+ S D G
Sbjct: 628 ILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIILDDLD---SIISSSS---DTEGTQ 681
Query: 486 SEVA-SVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC- 543
+ V +++ +F +D E + + + VA+ S E +P T+
Sbjct: 682 ASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLA--------FVASVQSLEQIPQTLSSSG 733
Query: 544 -FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV- 601
F + + +R +L +Q + D SE+ + ++ + G+ DL LV
Sbjct: 734 RFDFHVQLAAPATSERGAILKHEIQ---KRLLDC-SEDILLNLAAKCEGYDAYDLEILVD 789
Query: 602 ----ADAGANLIRKSNSEVDKNEPGESDLT------AKVAHND-NSSIAATQVMGKEDLV 650
A G +L +SN + K + D T VA D S + +G ED V
Sbjct: 790 RAVHAAIGRHLPLESN--ISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWED-V 846
Query: 651 KAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709
+ K + P K P K S LR RS VLLYGPPG GKT + A A CS
Sbjct: 847 GGVTDIKNAIKEMIELPSKFP---KIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
Query: 710 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 769
L F+SVKGPEL+N YIG SE+ VRDIF KA +A PC++FFDE DS+AP RG D+ GV
Sbjct: 904 LRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGH--DNTGVT 961
Query: 770 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 829
DRVV+Q L E+DG+ + +F+ A++RPDL+DPALLRPGR D+LL S R
Sbjct: 962 DRVVNQFLTELDGV-EVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPE-RLE 1019
Query: 830 VLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXR 889
+L L+RK + +D+ L IA F+GAD+ AL +DA AA + L
Sbjct: 1020 ILTVLSRKLLMADDIDLEPIALMTE-GFSGADLQALLSDAQL-AAVHEYLNREDK----- 1072
Query: 890 IDQADSVVVEYDDFVK-VLRELSPSLSMAELKKYELLRDQF 929
+ + + D +K + + PS+S E +K + QF
Sbjct: 1073 -PETGTTPIITDPLLKSIASKTKPSVSETEKQKLYDIYSQF 1112
Score = 42 (19.8 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLRVNCTKTAL 346
LH R+ +I F VV+ PS+ V V T+ A+
Sbjct: 150 LHDRT--VIRFSVVSTFPSKGVVQLVPGTEVAV 180
Score = 39 (18.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 33 LVLSSTKLLINSVLSSSRRVTGENLVGDDVSPSLQLPAGILRFSKDK 79
+++ S +L + + L S + G N+ D P+L L + + S+++
Sbjct: 311 MMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENE 357
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 576 (207.8 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 174/520 (33%), Positives = 276/520 (53%)
Query: 375 TVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSC 430
T +L L+ L V L+ A+L+ G G GK T+ + + + L HV C
Sbjct: 571 THSLLGRPLSRQLMALVAGLR-NGALLITGGKGSGKSTLAKAICKEAHDALDAHVEMVDC 629
Query: 431 HNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS---NESLPN--DQVGLS 485
L AL AF+ A P+++LL D D+ L S +E P L+
Sbjct: 630 KALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPSTPEHEHSPEAVQSQRLA 689
Query: 486 SEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFS 545
+ ++I+EF S G + + + Q L + S++G+ T + C
Sbjct: 690 HALNNMIKEFV----------SMG--SLVALIATSQLQHSLHPSLVSAQGVH-TFQ-CIQ 735
Query: 546 HEISMGPLTEQQRVEMLSQLLQPVSELTSDTG-SEEF-VKDIIGQTSGFMPRDLHALVAD 603
H + P ++QR E+L +++ ++L D S + +K I +T F+ RD LV
Sbjct: 736 H---IQPPDQEQRCEILHSVVK--NKLGCDISKSPDLDLKCIAKETEAFVARDFTVLVDR 790
Query: 604 A-GANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV--KAMERSKKRN 660
A ++L R+ N + +D + +S+ + DL K + R
Sbjct: 791 AIHSSLSRQQNPTREGLTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQ 850
Query: 661 ASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719
+ +LP + +LF++ +R+R+G+LLYGPPGTGKTLLA VA E +NF+S++GPE
Sbjct: 851 I-LMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPE 909
Query: 720 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAE 779
L++ YIG SE+ VRD+F +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L +
Sbjct: 910 LLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQ 967
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L++
Sbjct: 968 LDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILTVLSKSLP 1025
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
L +DV L +A +FTGAD+ AL +A A + ++L
Sbjct: 1026 LADDVDLQHVAS-VTESFTGADLKALLYNAQLEALQGRLL 1064
Score = 45 (20.9 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 112 SLVLVKNAETTKQRIAQVVVLDPPTTRK---QVCDGDVHSKHSSPTMLTFPSIHL 163
SL +V + E K++ V VL P +K QV + +HS + PS+ L
Sbjct: 499 SLSIVHSQEKEKEQGRTVFVLSPILLQKISVQVLLEPMIGEHSEEIDILLPSLTL 553
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 567 (204.7 bits), Expect = 3.3e-52, P = 3.3e-52
Identities = 161/496 (32%), Positives = 257/496 (51%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 LLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVAS-VIREFTEPSAEDEDEESHGYFPVKEIEK 518
+ + + D P + G SEV V+ E S G
Sbjct: 450 IFIDELDAL--------CPKRE-GAQSEVEKRVVASLLTLMDGIGSEGSEG--------- 491
Query: 519 ICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
+VL++ A + + L +RR F EI +G Q R+++L +LL+ V L +
Sbjct: 492 ----RVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKA 547
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGAN----LIRKSNSEVDKNEPGESDLTAK--- 629
E ++ + G++ DL AL +AG + ++RK + D G +T
Sbjct: 548 ---ELLR-LANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFL 603
Query: 630 VAHNDNSSIAATQV------MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLR 682
ND A +V + D + +E K + A+ + PL H F+ G++
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSD-IGGLENIKLKLKQAV---EWPLKHPKSFNRMGIQ 659
Query: 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 742
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 743 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ ++ A+NRPD I
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLAATNRPDRI 778
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
D AL+RPGR D+++YV + D + R +L + +V L + + ++GA++
Sbjct: 779 DKALMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNEVDLDELVLQTD-TYSGAEI 836
Query: 863 YALCADAWFHAAKRKV 878
A+C +A A + +
Sbjct: 837 IAVCKEAALLALEENI 852
Score = 408 (148.7 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 96/255 (37%), Positives = 144/255 (56%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ G+LLYGPPGTGKT++A+AVA E + GPE+I+ + G
Sbjct: 370 ELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYG 429
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
E+E +R IF +A P +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 430 ETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVEKRVVASLLTLMDGIGSE 487
Query: 787 SQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + ++GA+NRP +D AL RPGRFDK + +G+ + + + K L R LL
Sbjct: 488 GSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKA 547
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A + GAD+ ALC +A HA +R VL ++ A V + +DF+
Sbjct: 548 ELLRLANNAH-GYVGADLKALCNEAGLHALRR-VLRKQPNLPDSKV--AGMVKITLNDFL 603
Query: 905 KVLRELSPSLSMAEL 919
+ + ++ PS +M E+
Sbjct: 604 QGMNDIRPS-AMREV 617
Score = 46 (21.3 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 601 VADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRN 660
V AG L+ + S D + G + T D+S TQ + +E L+K K N
Sbjct: 260 VNKAGEVLLDVTQSPRDGSGLGLEESTGLKCSFDSSKEGNTQPVSEEKLLKPASAGTKSN 319
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 565 (203.9 bits), Expect = 5.5e-52, P = 5.5e-52
Identities = 159/486 (32%), Positives = 253/486 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSI 449
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D E N+ + V + + + E S G
Sbjct: 450 IFIDELDAL--CPKREGAQNE---VEKRVVASLLTLMDGIGS---EVSEG---------- 491
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
QVL++ A + L +RR F EI +G Q R+++L +LL+ V L ++
Sbjct: 492 ---QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEA- 547
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGA----NLIRKSNSEVDKNEPGESDLTAK---V 630
E ++ + G++ DL L +AG +++K + D G +T K
Sbjct: 548 --ELLQ-LANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 631 AHNDNSSIAATQV------MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF-SSGLRK 683
A ND A ++ + D + +E K + A+ + PL H + F G++
Sbjct: 605 AMNDIRPSAMREIAIDVPNVSWSD-IGGLESIKLKLEQAV---EWPLKHPESFIRMGIQP 660
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+ F+KAR+
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVA 720
Query: 744 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I+ A+NRPD ID
Sbjct: 721 PSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGI-EQLKDVTILAATNRPDRID 779
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
AL+RPGR D+++YV + D + R + K + +V L + + ++GA++
Sbjct: 780 KALMRPGRIDRIIYVPL-PDAATRREIFKLQFHSMPVSNEVDLDELILQTDA-YSGAEIV 837
Query: 864 ALCADA 869
A+C +A
Sbjct: 838 AVCREA 843
Score = 401 (146.2 bits), Expect = 9.2e-34, P = 9.2e-34
Identities = 96/255 (37%), Positives = 142/255 (55%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ GVLLYGPPGTGKT++A+AVA E + GPE+I+ + G
Sbjct: 370 ELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYG 429
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND- 785
E+E +R IF +A P +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 430 ETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSE 487
Query: 786 -SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
S + ++GA+NRP +D AL RPGRFDK + +GV + + + K L R LL +
Sbjct: 488 VSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEA 547
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A + GAD+ LC +A A R++L ++ A V + DF+
Sbjct: 548 ELLQLANSAH-GYVGADLKVLCNEAGL-CALRRILKKQPNLPDVKV--AGLVKITLKDFL 603
Query: 905 KVLRELSPSLSMAEL 919
+ + ++ PS +M E+
Sbjct: 604 QAMNDIRPS-AMREI 617
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 534 (193.0 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 107/210 (50%), Positives = 144/210 (68%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
PL +K L++ G+LLYGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GES
Sbjct: 953 PLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGES 1012
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E NVRD+F KAR+A PC+IFFDE+DSLA R S + DRV++Q+L EIDG+N+ +
Sbjct: 1013 EANVRDLFDKARAASPCIIFFDEIDSLAKERN-SNTNNDASDRVINQILTEIDGINEK-K 1070
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
+FII A+NRPD++D AL RPGR DKL+Y+ + D+ R + KA+ + L EDV ++
Sbjct: 1071 TIFIIAATNRPDILDKALTRPGRLDKLIYISL-PDLKSRYSIFKAILKNTPLNEDVDIHD 1129
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+AK+ F+GAD+ LC A A K +
Sbjct: 1130 MAKRTE-GFSGADITNLCQSAVNEAIKETI 1158
Score = 411 (149.7 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 121/423 (28%), Positives = 214/423 (50%)
Query: 471 LVSN--ESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVA 528
LV N E+L N + +S E + + + ++ + +++ ++ ++++
Sbjct: 343 LVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKKHYVVIS 402
Query: 529 AADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ 588
A + +R + I + P +R+ + +L P S+ + EE K +I
Sbjct: 403 FA-----MKKNLRLMHNDIIKIHPFMNAKRIRNV--VLSPFSDTIPNLSREELEKAVIHP 455
Query: 589 TSGFMPRDLHALVADAGANLIRKSNS---EVDK--NEPGESDLTAKVAHNDNSSIAATQV 643
++ L ++ + K+N +V K +E E++ + + ++A +
Sbjct: 456 ---YLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYL 512
Query: 644 M------GKEDLV-KAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGT 695
+D+ + + KK+ +LPL + ++F S G+ GVL++G PGT
Sbjct: 513 KREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGT 572
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSL 755
GKT +AKA+A E + + GPE+++ +IGESE+ +R IF+KA PC+IF DE+DS+
Sbjct: 573 GKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI 632
Query: 756 APARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
A R S + + RVVSQ+L +DGL ++ ++ ++ A+NRP+ IDPAL R GRFD+
Sbjct: 633 ANKRSKSNNE--LEKRVVSQLLTLMDGLKKNN-NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+ + V D R +L T+K KL DV+L IAK+C + GAD+ LC +A K
Sbjct: 690 IEIPV-PDEQGRYEILLTKTKKMKLDPDVNLRKIAKECH-GYVGADLAQLCFEAAIQCIK 747
Query: 876 RKV 878
+
Sbjct: 748 EHI 750
Score = 85 (35.0 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 377 KILASILAPTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL 433
KI I P P + +S+ VL+HG+PG GK ++ + +A + + +
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 434 MASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470
M+ ++ L + F A +P I+ + + D N
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIAN 634
Score = 45 (20.9 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFL 196
T+K V D + + + FP+ L ++ E LD Y+S L+++ + L
Sbjct: 317 TQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLL 376
Query: 197 VHQGKEVLESLFIAKVD 213
+GK+ E L IA++D
Sbjct: 377 --KGKKKREMLGIARLD 391
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 534 (193.0 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 107/210 (50%), Positives = 144/210 (68%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
PL +K L++ G+LLYGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GES
Sbjct: 953 PLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGES 1012
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E NVRD+F KAR+A PC+IFFDE+DSLA R S + DRV++Q+L EIDG+N+ +
Sbjct: 1013 EANVRDLFDKARAASPCIIFFDEIDSLAKERN-SNTNNDASDRVINQILTEIDGINEK-K 1070
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
+FII A+NRPD++D AL RPGR DKL+Y+ + D+ R + KA+ + L EDV ++
Sbjct: 1071 TIFIIAATNRPDILDKALTRPGRLDKLIYISL-PDLKSRYSIFKAILKNTPLNEDVDIHD 1129
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+AK+ F+GAD+ LC A A K +
Sbjct: 1130 MAKRTE-GFSGADITNLCQSAVNEAIKETI 1158
Score = 411 (149.7 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 121/423 (28%), Positives = 214/423 (50%)
Query: 471 LVSN--ESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVA 528
LV N E+L N + +S E + + + ++ + +++ ++ ++++
Sbjct: 343 LVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKKHYVVIS 402
Query: 529 AADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ 588
A + +R + I + P +R+ + +L P S+ + EE K +I
Sbjct: 403 FA-----MKKNLRLMHNDIIKIHPFMNAKRIRNV--VLSPFSDTIPNLSREELEKAVIHP 455
Query: 589 TSGFMPRDLHALVADAGANLIRKSNS---EVDK--NEPGESDLTAKVAHNDNSSIAATQV 643
++ L ++ + K+N +V K +E E++ + + ++A +
Sbjct: 456 ---YLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYL 512
Query: 644 M------GKEDLV-KAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGT 695
+D+ + + KK+ +LPL + ++F S G+ GVL++G PGT
Sbjct: 513 KREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGT 572
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSL 755
GKT +AKA+A E + + GPE+++ +IGESE+ +R IF+KA PC+IF DE+DS+
Sbjct: 573 GKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI 632
Query: 756 APARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
A R S + + RVVSQ+L +DGL ++ ++ ++ A+NRP+ IDPAL R GRFD+
Sbjct: 633 ANKRSKSNNE--LEKRVVSQLLTLMDGLKKNN-NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+ + V D R +L T+K KL DV+L IAK+C + GAD+ LC +A K
Sbjct: 690 IEIPV-PDEQGRYEILLTKTKKMKLDPDVNLRKIAKECH-GYVGADLAQLCFEAAIQCIK 747
Query: 876 RKV 878
+
Sbjct: 748 EHI 750
Score = 85 (35.0 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 377 KILASILAPTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL 433
KI I P P + +S+ VL+HG+PG GK ++ + +A + + +
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 434 MASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470
M+ ++ L + F A +P I+ + + D N
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIAN 634
Score = 45 (20.9 bits), Expect = 8.2e-52, Sum P(3) = 8.2e-52
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFL 196
T+K V D + + + FP+ L ++ E LD Y+S L+++ + L
Sbjct: 317 TQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLL 376
Query: 197 VHQGKEVLESLFIAKVD 213
+GK+ E L IA++D
Sbjct: 377 --KGKKKREMLGIARLD 391
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 491 (177.9 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 106/265 (40%), Positives = 159/265 (60%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ D++ + G+ +G LLYGPPG GKTL+AKA A E NF+ +KG EL+N Y+GES
Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGES 606
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E +R +FQ+AR+ PCVIFFDE+D+L +RG G V++R+++Q L E+DG +
Sbjct: 607 ELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEG--AWVVERLLNQFLVELDG--GERR 662
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGV-NSDVSYRERVLKALTRKFKLLEDVSLY 847
++++IGA+NRPD++DPA LRPGRF LLYV + N+D R +LKA+ RK + V L
Sbjct: 663 NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADE--RASILKAIARKKPIDPSVDLD 720
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVL 907
IAK F+GAD+ L A F A + + + ++ F + L
Sbjct: 721 GIAKNNCEGFSGADLAHLVQKATFQAVEEMI--GSSESSEDDVTDITQCTIKTRHFEQAL 778
Query: 908 RELSPSLSMAELKKYELLRDQFEGS 932
+SPS++ + + Y+ L + + S
Sbjct: 779 SLVSPSVNKQQRRHYDALSTKLQES 803
Score = 308 (113.5 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 76/217 (35%), Positives = 117/217 (53%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+L+ + F G++ SG+L +GPPG GKT LA A+A E + F + E+I+ G S
Sbjct: 252 PILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGAS 311
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN---- 784
E+N+R++F KA P ++F DE+D++ R + R+V+Q+L +DG
Sbjct: 312 EENIRELFSKAYRTAPSIVFIDEIDAIGSKR--ENQQREMEKRIVTQLLTCMDGPGNKGD 369
Query: 785 ----DSSQD-LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
DSS + +IGA+NRPD +DPAL R GRF+ + + D R +L + +K +
Sbjct: 370 KNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTA-PDEDARAEILSVVAQKLR 428
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
L IA+ P F GAD+ ++ A A KR
Sbjct: 429 LEGPFDKKRIAR-LTPGFVGADLESVAYLAGRKAIKR 464
Score = 118 (46.6 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 49/235 (20%), Positives = 102/235 (43%)
Query: 343 KTALVLGGSIPSALPPDLLISGSN-----DFVPLQGDTVKILASILAPTLCPSV---LSL 394
K +L L G+ + DL + G+ DF ++ ++ ++L P L P + +
Sbjct: 208 KVSLSLSGATGNG---DLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGV 264
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K +L HG PGCGK + +A G+ + S +++ + + + F+ A
Sbjct: 265 KPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYR 324
Query: 455 YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514
+P+I+ + + D + N+ ++ + +++ + + ++ + S G+
Sbjct: 325 TAPSIVFIDEIDAIGSKRENQQREMEK-RIVTQLLTCMDGPGNKGDKNAPDSSAGF---- 379
Query: 515 EIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQ 567
VL++ A + + L P +RR F EI++ E R E+LS + Q
Sbjct: 380 ---------VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQ 425
Score = 83 (34.3 bits), Expect = 9.1e-48, Sum P(2) = 9.1e-48
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
VL++ A + + L P +RR F EI++ E R E+LS + Q +L + ++
Sbjct: 380 VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQ---KLRLEGPFDK- 435
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEVDKNEPGESD 625
K I T GF+ DL ++ AG I++ + + +++ GE D
Sbjct: 436 -KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDD 480
Score = 40 (19.1 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 570 SELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDK--NEPGESDLT 627
S + D+G +D + PR L+ D+ + K NS K P E ++
Sbjct: 129 SSSSEDSGDVSTSEDAVYGEKLSPPR--FDLINDSLRDNYAKLNSSSKKPIGSPAEKNVE 186
Query: 628 AKVAHNDNSSIAATQVMGKE 647
+ N S AT KE
Sbjct: 187 VETVSNKGRSKLATMGARKE 206
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 572 (206.4 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
Identities = 177/539 (32%), Positives = 279/539 (51%)
Query: 356 LPPDLLISGSNDFVPLQGDTVK-ILASILAPTLCPSVLSLKFRV---AVLLHGLPGCGKR 411
L P L +S L ++ I S+L L +++L + A+L+ G G GK
Sbjct: 548 LLPSLTLSSLGGVSALGASAMEHITHSLLGRPLSRQLMALVAGLRNGALLITGGKGSGKS 607
Query: 412 TVVRYVARR----LGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
T + + + L V C L AL AF+ A P+++LL D D+
Sbjct: 608 TFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDL 667
Query: 468 FRNLVS-NESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLL 526
L S E + + S +A + + + S G V I QQ L
Sbjct: 668 IAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFV------STGSL-VALIATSQLQQSLH 720
Query: 527 VAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS--EEFVKD 584
+ S++G+ T + C H + P +QR E+L +++ ++L D + + ++
Sbjct: 721 PSLV-SAQGIH-TFQ-CVQH---LQPPNPEQRCEILHSVVK--NKLGCDISNFPDLDLQC 772
Query: 585 IIGQTSGFMPRDLHALVADA-GANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
I T F+ RD LV A ++L R+ +S + SD + +S+ +
Sbjct: 773 IAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSREDLTLTTSDFQKALRGFLPASLRNVNL 832
Query: 644 MGKEDLV--KAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLL 700
DL K + R + +LP + +LF++ +R+R+G+LLYGPPGTGKTLL
Sbjct: 833 HKPRDLGWDKIGGLHEVRQI-LMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 891
Query: 701 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 760
A VA E +NF+S+KGPEL++ YIG SE+ VRD+F +A++A+PC++FFDE +S+AP RG
Sbjct: 892 AGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRG 951
Query: 761 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 820
D+ GV DRVV+Q+L ++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y
Sbjct: 952 H--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPP 1008
Query: 821 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
VS R +L L++ L +DV L +A +FTGAD+ AL +A A + ++L
Sbjct: 1009 PDQVS-RLEILTVLSKSLALADDVDLQHVAS-VTDSFTGADLKALLYNAQLEALQGRLL 1065
Score = 37 (18.1 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 372 QGDTVKILASILAPTLCPSVL 392
+G TV +L+SIL + VL
Sbjct: 512 EGKTVFVLSSILLQKISVQVL 532
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 510 (184.6 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 104/213 (48%), Positives = 149/213 (69%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP + +LF++ +R+R+GVLLYGPPGTGKTLLA +A E +NF+SVKGPEL++ YIG
Sbjct: 856 QLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIG 915
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
SE+ VRD+F +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ +
Sbjct: 916 ASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EG 972
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
Q ++++ A++RPDLIDPALLRPGR DK +Y S R +L L+ L +DV L
Sbjct: 973 LQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQAS-RLEILNVLSESLPLADDVDL 1031
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
+A +FTGAD+ AL A A ++L
Sbjct: 1032 QHVAS-LTDSFTGADLKALLYGAQLEALHGRLL 1063
Score = 104 (41.7 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 61/235 (25%), Positives = 99/235 (42%)
Query: 375 TVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSC 430
T +L L+ L V L+ A+LL G G GK T+ + + + L HV C
Sbjct: 570 THSLLGRPLSRQLVSLVAGLR-NGALLLTGGKGSGKSTLAKAICKEAFDILDAHVEIIDC 628
Query: 431 HNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVAS 490
L LA AF+ A P+++LL D D+ +V +LP + S E
Sbjct: 629 KALRGKRLENIQKTLAAAFSEALWRQPSVVLLDDLDL---VVGRSALPEHEH--SPEAIQ 683
Query: 491 VIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISM 550
R + D +E + + + Q L S++G+ I +C H +
Sbjct: 684 SQR--LAHALNDLVKEFISMGSLVALIATSQSQHSLHPLLVSAQGIH--IFQCVQH---I 736
Query: 551 GPLTEQQRVEMLSQLLQPVSELTSD----TGSEEFVKDIIGQTSGFMPRDLHALV 601
P + QR E+L +++ ++L D TG + ++ I +T GF+ RD LV
Sbjct: 737 QPPDQDQRCEILHAIIK--NKLDCDMKRFTGLD--LQRIAKETEGFVARDFTMLV 787
Score = 39 (18.8 bits), Expect = 4.4e-44, Sum P(2) = 4.4e-44
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 566 LQPVSELTSDTGSEEFVKDI 585
LQP L+ D SEE +K +
Sbjct: 446 LQPTENLSEDV-SEEDIKTV 464
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 559 (201.8 bits), Expect = 1.0e-50, P = 1.0e-50
Identities = 166/516 (32%), Positives = 263/516 (50%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVV 426
L+ T +L L+ L V L+ A+L G G GK T+ + + + L HV
Sbjct: 551 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLFTGGKGSGKSTLAKAICKEASDTLDAHVE 609
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSS 486
C L + AF+ A P+++LL D D+ +V + P + G +
Sbjct: 610 VVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDL---IVGVPAAPEHEHGPEA 666
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ + + D +E + + + Q L S++G+ I +C H
Sbjct: 667 VQSQRLAH----ALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIH--IFQCVQH 720
Query: 547 EISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADA-G 605
+ P ++QR E+L +++ + + + +K I +T GF+ RD LV A
Sbjct: 721 ---IQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIH 777
Query: 606 ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL- 664
++L + + ++ D + +S+ + DL L
Sbjct: 778 SHLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILW 837
Query: 665 GAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723
+LP + +LF++ +R+R GVLLYGPPGTGKTLLA +A E +NF+SVKGPEL++
Sbjct: 838 DTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSK 897
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+
Sbjct: 898 YIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV 955
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
+ Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+ L +D
Sbjct: 956 -EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDSLPLADD 1013
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
V L +A +FTGAD+ AL +A A ++L
Sbjct: 1014 VDLQHVAS-VTNSFTGADLKALLYNAQLEAVHGRLL 1048
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 559 (201.8 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 166/516 (32%), Positives = 263/516 (50%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVV 426
L+ T +L L+ L V L+ A+L G G GK T+ + + + L HV
Sbjct: 700 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLFTGGKGSGKSTLAKAICKEASDTLDAHVE 758
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSS 486
C L + AF+ A P+++LL D D+ +V + P + G +
Sbjct: 759 VVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDL---IVGVPAAPEHEHGPEA 815
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ + + D +E + + + Q L S++G+ I +C H
Sbjct: 816 VQSQRLAH----ALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIH--IFQCVQH 869
Query: 547 EISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADA-G 605
+ P ++QR E+L +++ + + + +K I +T GF+ RD LV A
Sbjct: 870 ---IQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIH 926
Query: 606 ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL- 664
++L + + ++ D + +S+ + DL L
Sbjct: 927 SHLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILW 986
Query: 665 GAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723
+LP + +LF++ +R+R GVLLYGPPGTGKTLLA +A E +NF+SVKGPEL++
Sbjct: 987 DTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSK 1046
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+
Sbjct: 1047 YIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV 1104
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
+ Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+ L +D
Sbjct: 1105 -EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDSLPLADD 1162
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
V L +A +FTGAD+ AL +A A ++L
Sbjct: 1163 VDLQHVAS-VTNSFTGADLKALLYNAQLEAVHGRLL 1197
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 503 (182.1 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 132/331 (39%), Positives = 185/331 (55%)
Query: 552 PLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG----FMPRDLHALVADAGAN 607
PL E E S + +S +SD+ S I TSG F + +LVAD N
Sbjct: 618 PLEEAPIAESSSNM-SDISSDSSDSASSCIT--ISATTSGAQRSFSLDETVSLVADDIQN 674
Query: 608 LIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME--------RSKKR 659
S SE + GE L+ +N+ +E +++ + +++ +
Sbjct: 675 N-GNSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVK 733
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
N + A + P H+D F G R SG+L++GPPG KTL+A+AVA+E LNFL+VKGP
Sbjct: 734 N-QLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGP 792
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLA 778
EL + ++GESEK VR +F KAR+ P +IFFDE+DSLA RG D V DRV+SQ+L
Sbjct: 793 ELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLV 852
Query: 779 EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
E+DGL+ + +I A+NRPD ID ALLRPGRFD+LLYVG ++ RE +LK RK
Sbjct: 853 ELDGLHQRV-GVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETD-REAILKIHLRKI 910
Query: 839 KLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
D+ L +A +TGAD+ +C +A
Sbjct: 911 PCSSDICLKELAS-ITKGYTGADISLICREA 940
Score = 401 (146.2 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 85/206 (41%), Positives = 128/206 (62%)
Query: 672 LHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
+ L S GLR GVL++GPPGTGKT LA+ A +NF SV GPE+I+ Y+GESEK
Sbjct: 406 IKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKA 465
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLF 791
+ ++F+ A +A P V+F D+LD++APAR G+ + R+V+ +L +DG++ + +
Sbjct: 466 LDEVFRSASNATPAVVFIDDLDAIAPARKEGGEE--LSQRMVATLLNLMDGIS-RTDGVV 522
Query: 792 IIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK-LLEDVSLYSIA 850
+I A+NRPD I+PAL RPGR D+ + +GV S R +L + R + L ++ + +A
Sbjct: 523 VIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQ-RSDILHIILRGMRHSLSNIQVEQLA 581
Query: 851 KKCPPNFTGADMYALCADAWFHAAKR 876
F GAD+ ALC +A F +R
Sbjct: 582 M-ATHGFVGADLSALCCEAAFVCLRR 606
Score = 103 (41.3 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 304 SMICIPCRQRLHRR-SDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLI 362
S ICI C +R +R SD + + L + + G + L D
Sbjct: 319 SEICIFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFD--- 375
Query: 363 SGSN---DFVPLQGDTVK--ILASIL-APTLCPSVLSLKFRVA--VLLHGLPGCGKRTVV 414
G N + L G + + IL I+ + ++ S+ SL R VL+HG PG GK ++
Sbjct: 376 EGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLA 435
Query: 415 RYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
R AR G++ + +++ ++ AL + F +A + +P ++ + D D
Sbjct: 436 RTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLD 487
Score = 82 (33.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 30/114 (26%), Positives = 52/114 (45%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
V+++AA + + + P +RR EI +G + QR ++L +L+ + S+ E+
Sbjct: 521 VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQL 580
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEVDKNEPGESDLTAKVAHN 633
T GF+ DL AL +A +R+ S N P E A+ + N
Sbjct: 581 AM----ATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNLPLEEAPIAESSSN 630
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 556 (200.8 bits), Expect = 2.3e-50, P = 2.3e-50
Identities = 169/515 (32%), Positives = 263/515 (51%)
Query: 378 ILASILAPTLCPSVLSLKFRV---AVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSC 430
I S+L L ++SL + A+LL G G GK T+ + + + L HV C
Sbjct: 573 ITHSLLGRPLSRQLMSLMAGLRNGALLLTGGKGSGKSTLAKAICKEAFDVLDAHVEIVDC 632
Query: 431 HNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVAS 490
L + AF+ A P+++LL D D+ L +LP + S E
Sbjct: 633 KALRGKRLENLQKTIVAAFSEASWRQPSVVLLDDLDLVAGL---PALPEHEH--SPEAVQ 687
Query: 491 VIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISM 550
R + D +E + + + Q L S++G+ + +C H +
Sbjct: 688 SQR--LAHALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQGIH--LFQCVQH---I 740
Query: 551 GPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIR 610
P ++QR E+L ++ + ++ ++ +K I +T GF+ RD LV D + R
Sbjct: 741 QPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIVLV-DRAIHS-R 798
Query: 611 KSNSEVDKNEP---GESDLTAKVAHNDNSSIAATQVMGKEDLV-KAMERSKKRNASALGA 666
SN V E D + +S+ + DL + ++ +
Sbjct: 799 LSNQSVSTREELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGLREVRQILMDT 858
Query: 667 PKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK-GPELINMY 724
+LP + +LF++ +R+R+GVLLYGPPGTGKTLLA VA E + L ++ GPEL++ Y
Sbjct: 859 IQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVLRYGPELLSKY 918
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 784
IG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+
Sbjct: 919 IGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV- 975
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+ L EDV
Sbjct: 976 EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSASLPLAEDV 1034
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 879
L +A +FTGAD+ AL +A A ++L
Sbjct: 1035 DLQHVAS-LTDSFTGADLKALLYNAQLEALHGRLL 1068
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 554 (200.1 bits), Expect = 3.4e-50, P = 3.4e-50
Identities = 162/422 (38%), Positives = 225/422 (53%)
Query: 466 DVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE---ESHGYFPVKEI--EKIC 520
DVF V + P+ V L ++ V T P E E H +K++ E +
Sbjct: 610 DVFEQAVWRQ--PS--VVLLDDLDHVAGAATSPEHEHGPEAVLRQHISQSLKDLVDEIVL 665
Query: 521 RQQVL-LVAAADSSEGLPPTIRRC----FSHEISMGPLTEQ-QRVEMLSQLLQPVSELTS 574
R ++ L+ A + L PT+ F P +Q QRVE+L L+ S
Sbjct: 666 RSSLIALIVTAQTEHALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVC 725
Query: 575 DTGSEEFVKDIIGQTSGFMPRDLHALVADA-GANLIRKSNSEVDKN-EPGESDLTAKVAH 632
T + + + +T GFM RDL+ L+ A AN + S K+ T
Sbjct: 726 QTTLD--LDSVAKETEGFMARDLNLLLERAIHANTLHNSEDLSCKDFRQALQGFTPPSLW 783
Query: 633 NDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYG 691
+ + + A G E + + +++ + P K PLL L LR+ SGVLLYG
Sbjct: 784 D--AQLQAPSGAGMER-IGGLHEARQLLMDIILLPAKYPLLFSSL---PLRQCSGVLLYG 837
Query: 692 PPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDE 751
PGTGKTLLA AVA E +NF+S+KGPEL++ YIG SE+ VRD+FQ+A+ A+PC++FFDE
Sbjct: 838 APGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDE 897
Query: 752 LDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
DSLAP RG D+ GV DRVV+Q+L ++DG+ + ++++ AS+RPDLIDPALLRPGR
Sbjct: 898 FDSLAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLTGVYVLAASSRPDLIDPALLRPGR 954
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
DK LY D + R +L+ALT L DV L IA FTGAD+ AL +A
Sbjct: 955 LDKSLYCPP-PDRAARLEILRALTHSVPLAADVDLDQIAG-ATELFTGADLKALLYNAQL 1012
Query: 872 HA 873
A
Sbjct: 1013 EA 1014
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 539 (194.8 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 135/359 (37%), Positives = 205/359 (57%)
Query: 524 VLLVAAADSSEGLPPTIR--RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
++++A SS+ L +I+ F I + T ++RVE+L + L+ + D S
Sbjct: 730 IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQLKDQQSLNL 789
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANL--IRKSNSEVDKNEPGESDLTAKVAHNDNSSIA 639
+K G++ D+ +V D +L I++ + + N+ + D + + + +
Sbjct: 790 MK-FSASMEGYLGCDVEQIV-DRSIHLSSIKEIENNNNNNDDNDDDNIIEFSIIEKAKEG 847
Query: 640 ATQVMGKEDLVKAMERSKKRNASALGAPKL--------PLLHKDLF-SSGLRKRSGVLLY 690
T + K + + E K ++ L + + P + LF SS LR RSG+LLY
Sbjct: 848 YTPITLKGIKLHSSE-IKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLY 906
Query: 691 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 750
GP G GKTLLA A+A EC LNF+SVKGPEL+N YIG SE+ VRD+F +A SA+PCV+FFD
Sbjct: 907 GPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFD 966
Query: 751 ELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPG 810
E DS+AP RG D+ GV DRVV+Q L ++DG+ + ++++ A++RPDLIDPALLRPG
Sbjct: 967 EFDSIAPRRGH--DNSGVTDRVVNQFLTQLDGV-EGLTGVYVLAATSRPDLIDPALLRPG 1023
Query: 811 RFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
R DK LY + + + R +L L K L +SL ++ +TGAD+ AL +A
Sbjct: 1024 RLDKSLYCNI-PEFNERLDILTCLKSKMNLSPSISLEQLSTNTQ-YYTGADLRALMYNA 1080
Score = 59 (25.8 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 907 LRELSPSLSMAELKKYELLRDQF 929
L+E SPS+S +E KKYE + + F
Sbjct: 1184 LKESSPSISESERKKYERIYNNF 1206
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 525 (189.9 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 137/411 (33%), Positives = 229/411 (55%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+ ++A + + L P+IRR +E+ +G + Q R+E++ L++ V SD EE
Sbjct: 417 KTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSD---EE 473
Query: 581 FVKDIIGQTSGFMPRDL----HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNS 636
V+ + T G++ DL +A + A N ++ + + S + + N
Sbjct: 474 -VEHVASITHGYVGADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPN- 531
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGT 695
+ + + G+ +L AM++ A + PLLH D F G++ G+L++GPPG
Sbjct: 532 -VQWSDIGGQSELRLAMQQ----------AIEWPLLHADKFQRLGIKPPRGILMFGPPGC 580
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSL 755
KT++AKA+ATE LNFLS+KGPEL +M++GESE+ VR++F+KAR P ++FFDE+D++
Sbjct: 581 SKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAI 640
Query: 756 APARG-ASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRF 812
R G S G V +RV++Q+L E+DG+ ++ Q++ I+ A+NRPD+ID ALLRPGR
Sbjct: 641 GGERSEGDGSSSGSSVKERVLTQLLTELDGV-EALQNVTIVAATNRPDMIDKALLRPGRI 699
Query: 813 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 872
D++LYVG+ + RE +LK R + DV + + + ++GA++ A+C +A
Sbjct: 700 DRILYVGLPQCEARRE-ILKIKLRAMPISNDVDMEKLVQ-LTEGYSGAEIQAVCHEAALR 757
Query: 873 AAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
A ++ +A+ V ++ DF L+ + P S LK YE
Sbjct: 758 ALEQSF-------------EAEDV--KWTDFEHALKAVPPRTSPELLKLYE 793
Score = 177 (67.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 66/268 (24%), Positives = 130/268 (48%)
Query: 619 NEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFS 678
++ + + K++H I Q+ G + ++ +E S + ALG LP
Sbjct: 254 DDANQQEEEQKISHR----ITKCQIGGLDRQLQLVEESMEY---ALGFRTLP-------- 298
Query: 679 SGLRKRSGVLLYGPPGTGKTLLAKA---VATECS---LNFLSVKGPELINMYIGESEKNV 732
+GLR G+LLYG G GK+++ +A VA E S + + + E+ + ++GE+E+ +
Sbjct: 299 AGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKL 358
Query: 733 RDIFQKARS--ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ-- 788
IF++A + P ++ +++ +L P + ++ ++ RV L+ +D L+ SQ
Sbjct: 359 GAIFERAYNHYPHPTLLLIEDVHNLCPKQ----ENSDLVKRVSLAFLSLLDQLSSPSQLK 414
Query: 789 --DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK-LLEDVS 845
F++ S++ D + P++ R GR D + +G S + R +++ L + + L D
Sbjct: 415 GSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQA-RLEIVRCLIKSVEHQLSDEE 473
Query: 846 LYSIAKKCPPNFTGADMYALCADAWFHA 873
+ +A + GAD+ L A A
Sbjct: 474 VEHVAS-ITHGYVGADLANLVYAAMLQA 500
Score = 40 (19.1 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 103 LKQLSVT-SGSLVLVKNA--ETTKQRIAQVVVLDPPTTRKQ 140
LK L + LV V + + I Q VVL+ P+T +Q
Sbjct: 73 LKDLPTKYANMLVFVSEGAMQLAQLHIGQHVVLEAPSTAEQ 113
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 520 (188.1 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 130/309 (42%), Positives = 186/309 (60%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE-------P-GESDLTAKV----- 630
DI G+T G+MP DL LV A + +S E +++ P G D +
Sbjct: 779 DIAGRTDGYMPGDLLLLVTRARNAALSRSLEETAEDDHLNALGVPLGMQDFDEALKGFTP 838
Query: 631 AHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLL 689
A N S+ ++ + K D + + +++ L + P + +F+ LR RSG+LL
Sbjct: 839 ASLHNVSLQSSTI--KFDSIGGLSETRRVLLETL---QYPTKYAPIFAQCPLRLRSGLLL 893
Query: 690 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 749
YG PG GKTLLA AVA EC LNF+SVKGPE++N YIG SEK+VRD+F++A +A+PCV+FF
Sbjct: 894 YGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFF 953
Query: 750 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP 809
DE DS+AP RG DS GV DRVV+Q+L ++DG S ++++ A++RPDLIDPALLRP
Sbjct: 954 DEFDSIAPKRGH--DSTGVTDRVVNQLLTQMDGAEGLS-GVYVLAATSRPDLIDPALLRP 1010
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV-----SLYSIAKKCPPNFTGADMYA 864
GR DK L + R +++AL K K+ E+V L +A++ FTGAD+ A
Sbjct: 1011 GRLDKSLICDF-PNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTE-GFTGADLQA 1068
Query: 865 LCADAWFHA 873
L +++ A
Sbjct: 1069 LMSNSQLEA 1077
Score = 54 (24.1 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRLG----IHVVEYSCHNLMASSERKTSA--ALAQAF-NT 451
+VLL G G GK +V + +A L H ++C +L R + L + F N
Sbjct: 555 SVLLTGALGSGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATVRETLNRLFMNA 614
Query: 452 ---AQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP-SAED 502
A+ I++L D D + + ND G S +++ + + AED
Sbjct: 615 SWGARLGGKAIVILDDLDKLCPAETELQVGNDN-GRSRQISEALCAIVKQYCAED 668
Score = 50 (22.7 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 893 ADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 929
A VV+ + K L E PS+S E + E + +F
Sbjct: 1190 AGEVVIGWSHITKALDETRPSISSEERARLERIYREF 1226
Score = 39 (18.8 bits), Expect = 7.5e-46, Sum P(3) = 7.5e-46
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 23 IDSMVERRKPLVLSSTKLLINSVLSSSRRVTGENL 57
IDS+++ K + + +L+ L S + G+++
Sbjct: 539 IDSLLKELKSHLTHLSSVLLTGALGSGKTSVGKSI 573
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 524 (189.5 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 164/500 (32%), Positives = 263/500 (52%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGI---HVVEY-SCHNLMASSERKTSAA-LAQAFNTAQSY 455
L++G G GK +++ VA++L + +Y SC +M + + S + T
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWN 554
Query: 456 SPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKE 515
P++L+L + D L+S E D A+ + TE F +
Sbjct: 555 KPSVLILDNID---KLMSVEMENMD--------ATKSNQLTE-------------FFISN 590
Query: 516 IEKICRQ---QVLLVAAADSSEGLPPTIRRCFSHEIS----MGPLTEQQRVEMLSQLLQP 568
+ KI Q + ++ +A+S + + + SH I + P + R E+L + L
Sbjct: 591 LTKIHHQLNSNLSILLSANSKDNINKLLLG--SHLIENFHHLNPPDKSLRFEILDKYL-- 646
Query: 569 VSELTSDTGSEEFVK--DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
T+ G + V D++ +T G++P DL L +D + + +++E + E+
Sbjct: 647 ----TNKLGLKIKVDLMDLVSETEGYLPNDLKIL-SDRIYHEVLFNSTETETETETEATT 701
Query: 627 TAKVAHNDNSSIAATQVMGKEDLVKAMERS---------KKRNASALGAPKLPLLHKDLF 677
A V A VK + S K+ L + P + +F
Sbjct: 702 NAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIF 761
Query: 678 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 736
++ LR RSG+LLYG PG GKTLLA A+A +C LNF+S+KGPE++N YIG SE++VR++F
Sbjct: 762 ANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELF 821
Query: 737 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGAS 796
++A++A+PC++FFDE DS+AP RG DS GV DRVV+QML ++DG + ++++ A+
Sbjct: 822 ERAQAAKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGA-EGLDGVYVLAAT 878
Query: 797 NRPDLIDPALLRPGRFDKLLYVGVNSDV-SYRER--VLKALTRKFKLLEDVSLYSIAKKC 853
+RPDLID ALLRPGR DK V D+ +Y +R +L+++T K L +DV+L+ IA+K
Sbjct: 879 SRPDLIDSALLRPGRLDK----SVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKT 934
Query: 854 PPNFTGADMYALCADAWFHA 873
F+GADM L +A+ A
Sbjct: 935 T-GFSGADMQGLGYNAYLKA 953
Score = 52 (23.4 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 929
V++ +++F++ L+E PS+S +E K + +F
Sbjct: 1034 VLITHENFLESLKETKPSISHSEKIKLTKIYKEF 1067
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 524 (189.5 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 164/500 (32%), Positives = 263/500 (52%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGI---HVVEY-SCHNLMASSERKTSAA-LAQAFNTAQSY 455
L++G G GK +++ VA++L + +Y SC +M + + S + T
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWN 554
Query: 456 SPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKE 515
P++L+L + D L+S E D A+ + TE F +
Sbjct: 555 KPSVLILDNID---KLMSVEMENMD--------ATKSNQLTE-------------FFISN 590
Query: 516 IEKICRQ---QVLLVAAADSSEGLPPTIRRCFSHEIS----MGPLTEQQRVEMLSQLLQP 568
+ KI Q + ++ +A+S + + + SH I + P + R E+L + L
Sbjct: 591 LTKIHHQLNSNLSILLSANSKDNINKLLLG--SHLIENFHHLNPPDKSLRFEILDKYL-- 646
Query: 569 VSELTSDTGSEEFVK--DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
T+ G + V D++ +T G++P DL L +D + + +++E + E+
Sbjct: 647 ----TNKLGLKIKVDLMDLVSETEGYLPNDLKIL-SDRIYHEVLFNSTETETETETEATT 701
Query: 627 TAKVAHNDNSSIAATQVMGKEDLVKAMERS---------KKRNASALGAPKLPLLHKDLF 677
A V A VK + S K+ L + P + +F
Sbjct: 702 NAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIF 761
Query: 678 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 736
++ LR RSG+LLYG PG GKTLLA A+A +C LNF+S+KGPE++N YIG SE++VR++F
Sbjct: 762 ANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELF 821
Query: 737 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGAS 796
++A++A+PC++FFDE DS+AP RG DS GV DRVV+QML ++DG + ++++ A+
Sbjct: 822 ERAQAAKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGA-EGLDGVYVLAAT 878
Query: 797 NRPDLIDPALLRPGRFDKLLYVGVNSDV-SYRER--VLKALTRKFKLLEDVSLYSIAKKC 853
+RPDLID ALLRPGR DK V D+ +Y +R +L+++T K L +DV+L+ IA+K
Sbjct: 879 SRPDLIDSALLRPGRLDK----SVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKT 934
Query: 854 PPNFTGADMYALCADAWFHA 873
F+GADM L +A+ A
Sbjct: 935 T-GFSGADMQGLGYNAYLKA 953
Score = 52 (23.4 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 896 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 929
V++ +++F++ L+E PS+S +E K + +F
Sbjct: 1034 VLITHENFLESLKETKPSISHSEKIKLTKIYKEF 1067
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 533 (192.7 bits), Expect = 3.2e-47, Sum P(3) = 3.2e-47
Identities = 123/297 (41%), Positives = 181/297 (60%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEV-DKNEP---GESDLTAKVAHNDNSSIA 639
D+ G+T GFMP DL LVA A + +S SE D++ G +D + +S+
Sbjct: 779 DLAGKTDGFMPGDLVLLVARARNEALIRSISEASDESRAIILGAADFDNAIKGFTPASLR 838
Query: 640 ATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKT 698
+ A+ + L + P + +F+ LR RSG+LLYG PG GKT
Sbjct: 839 NVTLTSSTTTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKT 898
Query: 699 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 758
+LA AVA EC LNF+SVKGPE++N YIG SEK+VRD+F++A++ARPC++FFDE DS+AP
Sbjct: 899 MLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFDEFDSIAPK 958
Query: 759 RGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYV 818
RG DS GV DRVV+Q+L ++DG S ++++ A++RPDLIDPALLRPGR DK L
Sbjct: 959 RGH--DSTGVTDRVVNQLLTQMDGAEGLS-GVYVLAATSRPDLIDPALLRPGRLDKSLLC 1015
Query: 819 GVNSDVSYRERVLKALTRKFKLLEDV--SLYSIAKKCPPNFTGADMYALCADAWFHA 873
+ + R +++A+++K + +V + +A + F+GAD+ A+ +A A
Sbjct: 1016 DMPNHAD-RADIIRAVSKKLAMSNEVVARIDEVAARTA-GFSGADLQAVVYNAHLEA 1070
Score = 48 (22.0 bits), Expect = 3.2e-47, Sum P(3) = 3.2e-47
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEY-SCHNLMASSERKTSA--ALAQAFNTA 452
+VL+ G G GK + + +A RL + V+Y SC L+ R ++ L + F +A
Sbjct: 557 SVLVTGGLGSGKTALGQLLAHRLQKESLFNVKYFSCRKLVTDETRISNIKETLNRLFMSA 616
Query: 453 ----QSYSPTILLLRDFDVFRNLVSNESLPNDQVGLS---SEV-ASVIREF 495
+ + ++L D D + + + D G S SEV S++REF
Sbjct: 617 AWCARLGGQSTVILDDLDKLCPVETELQVGGDN-GRSRQNSEVICSMVREF 666
Score = 39 (18.8 bits), Expect = 3.2e-47, Sum P(3) = 3.2e-47
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 894 DSVVVEYDDFVKVLRELSPSLSMAELKKY-ELLRDQFEG 931
+ +VV ++ + L SLS AE ++ + R+ EG
Sbjct: 1166 EEIVVRWEHMERSLNTTRSSLSEAERRRLLAIYREFVEG 1204
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 386 (140.9 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 93/249 (37%), Positives = 139/249 (55%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP F GL +GVLL GPPG GKTLL KAVA E L + GP L GE
Sbjct: 215 LPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGE 274
Query: 728 SEKNVRDIFQKARSAR---PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 784
SE+N+R +F+K R P V+F DE+D+L P RG+S + DR+V+Q+L +DG+
Sbjct: 275 SEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPE--DRLVAQLLTLLDGVG 332
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + ++ A+NRPD +DPAL RPGRFD+ + +G + ++ R +L+ LT + D+
Sbjct: 333 RKDR-MVVVAATNRPDALDPALRRPGRFDREVIIGTPT-LTQRRSILQMLTCSMPISTDI 390
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A+ + GAD+ ALC +A A + V +D A+ V++ DF
Sbjct: 391 DLVKLAEMTT-GYVGADLTALCREA----AMQAVFHSS-------LDSAE-VLINMADFQ 437
Query: 905 KVLRELSPS 913
+ +++ PS
Sbjct: 438 EAFKKIQPS 446
Score = 320 (117.7 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 91/271 (33%), Positives = 146/271 (53%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
+ ++++VAA + + L P +RR F E+ +G T QR +L Q+L +++D
Sbjct: 334 KDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSIL-QMLTCSMPISTDI-- 390
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSN---SEVDKNEPGESDLTAKVAHND- 634
+ VK + T+G++ DL AL +A + S+ +EV N + K+ +
Sbjct: 391 -DLVK-LAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVLINMADFQEAFKKIQPSSF 448
Query: 635 NSSIAATQVMGKE-DLVKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGP 692
S+I + + + +E K + ++ P KLP + GL + GVLLYGP
Sbjct: 449 RSAIGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARM---GLARPKGVLLYGP 505
Query: 693 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 752
G KT L KAVAT C +FLSV G EL + Y+G+SEK + +F++AR+ P +IF DE+
Sbjct: 506 SGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEI 565
Query: 753 DSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
DS+ +R S GV +RV+S +L E+DG+
Sbjct: 566 DSILGSRSHSKSGHGVSERVLSVLLNELDGV 596
Score = 208 (78.3 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 768 VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYR 827
V +R +++ E++ S+D ++ A+NRPD++D ALLRPGR D+++Y+ D+ R
Sbjct: 600 VTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPP-PDLKGR 658
Query: 828 ERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXX 887
+LK T K L DVSL IA + F+GAD+ LC +A A + L
Sbjct: 659 LSILKICTEKIPLDTDVSLQDIAARTDL-FSGADIENLCKEAALLALQENGL-------- 709
Query: 888 XRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQ 928
++ V++ FVK L+ + PSLSM +L+ YE + Q
Sbjct: 710 ------EATAVKHGHFVKSLQTVKPSLSMKDLEFYEKIYSQ 744
Score = 90 (36.7 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 321 IIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQG--DTVKI 378
+++ ++++V+P E + +T++ + I L L++ +P+ G D +
Sbjct: 152 VLHVEILSVDPVTEEAGLIT-PQTSVTIKEVI--TLERYRLLTEDTAKIPVAGLDDVGES 208
Query: 379 LASIL-APTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLM 434
L ++ P P L L VLL G PG GK +V+ VAR G +++ S L
Sbjct: 209 LKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALY 268
Query: 435 ASSERKTSAALAQAFNTAQSYS---PTILLLRDFDVF-RNLVSNESLPNDQV 482
S ++ L F + S PT+L + + D S+ S P D++
Sbjct: 269 GSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPEDRL 320
Score = 41 (19.5 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 599 ALVADAGANLIRKSNSEVDKNEPGESD 625
A+ +AGA L+ S + + PGES+
Sbjct: 250 AVAREAGAYLLCISGPALYGSRPGESE 276
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 453 (164.5 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 95/230 (41%), Positives = 147/230 (63%)
Query: 650 VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708
+ E K++ A+ P K P + G++ G+LLYGPPG KTLLAKA+ATE
Sbjct: 624 IGGQEHIKQKLKEAIEWPLKYP---QSFIRMGIKPPKGILLYGPPGCSKTLLAKALATES 680
Query: 709 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 768
LNF++VKGPEL++ ++GESE+ VRDIF+KAR P ++FFDE+D LA +R SG+ G
Sbjct: 681 GLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISR--SGEGSGA 738
Query: 769 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828
++RVVSQ+L E+DG+ + ++ IIGA+NRPD+ID A+LR GR D++LY+ D+ R+
Sbjct: 739 VERVVSQLLTEMDGIQPLT-NVTIIGATNRPDIIDKAILRAGRIDRILYISP-PDLDARK 796
Query: 829 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+ +K D+ + ++ ++GA++ ++C +A A K +
Sbjct: 797 EIFNIHLKKVPHSSDIDINQLSI-LTDGYSGAEVTSICREASIAAMKEDI 845
Score = 243 (90.6 bits), Expect = 7.6e-25, Sum P(2) = 7.6e-25
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 614 SEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLH 673
S ++ N ++ K+ +N N ++ + G + VK + R L KL LL
Sbjct: 285 STINSNNNNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQI-----RELIDLSFYKLDLLK 339
Query: 674 KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 733
S G++ G+LLYGPPGTGKTLLA+ VAT+ + ++ G ++++ + G +EK ++
Sbjct: 340 ----SFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQ 395
Query: 734 DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
IF+ A P +IF DELD+L P R +S V R+V +L +DG+ +S
Sbjct: 396 KIFKDAAQKSPSIIFIDELDALCPKR--EDNSSEVEKRIVGSLLTLMDGVVSTS 447
Score = 130 (50.8 bits), Expect = 7.6e-25, Sum P(2) = 7.6e-25
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF-KLLE 842
N + +IG +NRPD ID AL RPGRFD + + + + RE++L K L
Sbjct: 463 NCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQG-REQILNIFLSKIPNQLT 521
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADA 869
+ IA K F GAD+ +LC +A
Sbjct: 522 SQEIAMIASKTH-GFVGADIESLCKEA 547
Score = 112 (44.5 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 54/270 (20%), Positives = 112/270 (41%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA + + + +++ T L + F A SP+I
Sbjct: 349 ILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSI 408
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D L + +V + + + D+ G
Sbjct: 409 IFIDELDA---LCPKREDNSSEV--EKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGN 463
Query: 520 CR-QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
C +V+++ + + + +RR F +EI + +Q R ++L+ L S++ +
Sbjct: 464 CGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFL---SKIPNQL 520
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGA---NLIRKSNSE------VDKNEPGESDLT 627
S+E I +T GF+ D+ +L +A N I+ N + ++K E G+ +
Sbjct: 521 TSQEIAM-IASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEE-- 577
Query: 628 AKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
K N + ++ + + D++ A+ + K
Sbjct: 578 -KQEENLQNLLSLIK-LSMNDMLLALNQVK 605
Score = 40 (19.1 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 199 QGKEVLESLFIAKVDDGTSGQD 220
QG+E + ++F++K+ + + Q+
Sbjct: 503 QGREQILNIFLSKIPNQLTSQE 524
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 509 (184.2 bits), Expect = 5.0e-46, P = 5.0e-46
Identities = 148/425 (34%), Positives = 223/425 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 384 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 443
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D E N+ VAS++ +E S G
Sbjct: 444 IFIDELDAL--CPKREGAQNEVE--KRVVASLLTLMDGIGSEG----SEG---------- 485
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
QVL++ A + L +RR F EI +G Q R+++L +LL+ V L ++
Sbjct: 486 ---QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEA- 541
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGA----NLIRKSNSEVDKNEPGESDLTAK---V 630
E ++ + G++ DL AL +AG ++RK + D G +T K
Sbjct: 542 --ELLQ-LANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGLVKITLKDFLQ 598
Query: 631 AHNDNSSIAATQV------MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRK 683
ND A +V + D + +E K + A+ + PL H + F+ G++
Sbjct: 599 GMNDIRPSAMREVAIDVPNVSWSD-IGGLENIKLKLKQAV---EWPLKHPESFTQMGIQP 654
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+KAR+
Sbjct: 655 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVA 714
Query: 744 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I+ A+NRPD ID
Sbjct: 715 PSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKDVTILAATNRPDRID 773
Query: 804 PALLR 808
LLR
Sbjct: 774 KELLR 778
Score = 407 (148.3 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 97/255 (38%), Positives = 144/255 (56%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ GVLLYGPPGTGKT++A+AVA E + GPE+I+ + G
Sbjct: 364 ELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYG 423
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
E+E +R IF +A P +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 424 ETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSE 481
Query: 787 SQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + ++GA+NRP +D AL RPGRFDK + +GV + + + K L R LL +
Sbjct: 482 GSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEA 541
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A + GAD+ ALC +A +A +R VL ++ A V + DF+
Sbjct: 542 ELLQLANSAH-GYVGADLKALCNEAGLYALRR-VLRKQPNLPDSKV--AGLVKITLKDFL 597
Query: 905 KVLRELSPSLSMAEL 919
+ + ++ PS +M E+
Sbjct: 598 QGMNDIRPS-AMREV 611
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 506 (183.2 bits), Expect = 5.7e-46, Sum P(3) = 5.7e-46
Identities = 155/500 (31%), Positives = 260/500 (52%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL--GIHV-VEYS-CHNLMASSER-KTSAALAQAFNTAQ 453
A++L G G GK +++ + + H+ V+Y+ C L +S KT + + +
Sbjct: 456 AIILDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCY 515
Query: 454 SYSPTILLLRDFD-VFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFP 512
Y P++++L + + +F +N+ P++ G + ++ F + ++++
Sbjct: 516 WYGPSLIVLDNVEALFGKPQANDGDPSNN-GQWDNASKLLNFFINQVTKIFNKDN----- 569
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEI-SMGPLTEQQRVEMLSQLLQP--V 569
K I +L + ++ P + F E S+ + R ++L +
Sbjct: 570 -KRIR-------VLFSGKQKTQINPLLFDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 570 SELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANL-IRKSNSEVDKNEPGESDLTA 628
+L D +F D+ +T GF P DL +L + + V E L+A
Sbjct: 622 MKLNRDL---QF-SDLSLETEGFSPLDLEIFTEKIFYDLQLERDCDNVVTRELFSKSLSA 677
Query: 629 KVAHNDNSSIAATQVMGKEDLVKAMERSKKRNAS--ALGAPKLPLLHKDLF-SSGLRKRS 685
S++ ++ KE +K + NA L + P ++ +F + LR RS
Sbjct: 678 FTP----SALRGVKLT-KETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRS 732
Query: 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 745
G+LLYG PG GKTLLA AVA +C LNF+SVKGPE++N +IG SE+N+R++F++A+S +PC
Sbjct: 733 GILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPC 792
Query: 746 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 805
++FFDE DS+AP RG DS GV DRVV+Q+L ++DG + ++I+ A++RPDLID A
Sbjct: 793 ILFFDEFDSIAPKRGH--DSTGVTDRVVNQLLTQMDGA-EGLDGVYILAATSRPDLIDSA 849
Query: 806 LLRPGRFDKLLYVGVNSDVSYRERVLKALT---------RKFKLLEDVSLYSIAKKCPPN 856
LLRPGR DK + + ++ S R +L+A+ +KF L ++ L IA+K
Sbjct: 850 LLRPGRLDKSVICNIPTE-SERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTA-G 907
Query: 857 FTGADMYALCADAWFHAAKR 876
F+GAD+ LC +A+ + R
Sbjct: 908 FSGADLQGLCYNAYLKSVHR 927
Score = 108 (43.1 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 388 CPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQ 447
CP L+ R +LL+G PGCGK + VA++ G++ + ++ + + +
Sbjct: 726 CP----LRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRE 781
Query: 448 AFNTAQSYSPTILLLRDFD 466
F AQS P IL +FD
Sbjct: 782 LFERAQSVKPCILFFDEFD 800
Score = 67 (28.6 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEF-------VKDIIGQTSGFMPRDLHALVADAGA 606
TE +R+++L + V+ DTG ++F +K I +T+GF DL L +A
Sbjct: 866 TESERLDILQAI---VNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYL 922
Query: 607 NLIRKSNSEVDKNE--PGESDL 626
+ + S D++E PG ++
Sbjct: 923 KSVHRWLSAADQSEVVPGNDNI 944
Score = 62 (26.9 bits), Expect = 5.7e-46, Sum P(3) = 5.7e-46
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 895 SVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN 934
+ VV +D ++ +E PS+S +EL K + D+F+ N
Sbjct: 985 TAVVTINDLLEACQETKPSISTSELVKLRGIYDRFQKDRN 1024
Score = 38 (18.4 bits), Expect = 5.7e-46, Sum P(3) = 5.7e-46
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 103 LKQLSVTSGSLVLVKNAETTKQRIAQ 128
+K +T GSLV+V + K R+ +
Sbjct: 168 MKSARITDGSLVVVA-PKVNKTRLVK 192
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 456 (165.6 bits), Expect = 7.7e-46, Sum P(3) = 7.7e-46
Identities = 122/363 (33%), Positives = 194/363 (53%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+++++ A + + +RR F E+ +G + R E+L++ ++ EE
Sbjct: 367 RIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKEE 426
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHND-NSSIA 639
+ I +T G++ DL AL ++ I + + G KV +D ++
Sbjct: 427 -IASIASKTHGYVGADLTALCRESVMKAINRGLTV------GIPQTAIKVTVDDVYHALP 479
Query: 640 ATQVMGKEDLVKAMER--------SKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLY 690
+ ++ M + ++ + +LPL D F + G+ GVLLY
Sbjct: 480 EIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLY 539
Query: 691 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 750
GPPG KTL AKA+ATE LNFL+VKGPE+ N Y+GESE+ +R+IF+KAR+A P +IFFD
Sbjct: 540 GPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFD 599
Query: 751 ELDSLAPARGASGDSGGVM-DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP 809
E+D++A R GDS V++ +L EIDG+ + + + I+GA+N+P IDPALLRP
Sbjct: 600 EIDAIAGDR--DGDSSTTAASNVLTSLLNEIDGVEEL-KGVVIVGATNKPTEIDPALLRP 656
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLL---EDVSLYSIAKKCPPNFTGADMYALC 866
GR D+ +YV D R ++L+ +RKF L E V L +A+ +GA++ LC
Sbjct: 657 GRLDRHIYVAP-PDYDARLQILQKCSRKFNLQSGDESVDLQKLAE-LTDGCSGAEVTLLC 714
Query: 867 ADA 869
+A
Sbjct: 715 QEA 717
Score = 423 (154.0 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 102/259 (39%), Positives = 157/259 (60%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS-LNFLSVKGPELINMYI 725
+LPL + LFS G+ G+LL+GPPGTGKT+L + VA + + L++ GP +++ Y+
Sbjct: 246 ELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYL 305
Query: 726 GESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND 785
GE+E +RDIF +A+ +P +IF DE+DS+AP+R S DSG RVV+Q+L +DG+ D
Sbjct: 306 GETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR-TSDDSGETESRVVAQLLTVMDGMGD 364
Query: 786 SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL-----KALTRKFKL 840
+ + + +IGA+NRP+ ID AL RPGRFD+ + +G+ DV RE +L K + K ++
Sbjct: 365 NGR-IVVIGATNRPNSIDSALRRPGRFDQEVEIGI-PDVEAREEILTKQFAKMNSEKCQI 422
Query: 841 LEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY 900
++ + SIA K + GAD+ ALC ++ A R + I Q ++ V
Sbjct: 423 TKE-EIASIASKTH-GYVGADLTALCRESVMKAINRGLTVG--------IPQT-AIKVTV 471
Query: 901 DDFVKVLRELSPSLSMAEL 919
DD L E+ PS +M E+
Sbjct: 472 DDVYHALPEIRPS-AMREI 489
Score = 102 (41.0 bits), Expect = 7.7e-46, Sum P(3) = 7.7e-46
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 351 SIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGK 410
++P + D + G + + L T+++ + PTL S + +LLHG PG GK
Sbjct: 221 NLPQQITYDQ-VGGLSKQIELLKSTIEL--PLNNPTLF-SDFGISPPRGILLHGPPGTGK 276
Query: 411 RTVVRYVARRLG-IHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++R VA + HV+ + ++++ +T A+ FN A+ + P+I+ + + D
Sbjct: 277 TMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEID 333
Score = 39 (18.8 bits), Expect = 7.7e-46, Sum P(3) = 7.7e-46
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 102 VLKQLSVTSGSLVLVKNAETTKQRIAQVV 130
+L + + +G+LVLV ++++ + V
Sbjct: 55 ILSAMELNNGNLVLVSSSDSGSAGVVATV 83
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 493 (178.6 bits), Expect = 8.7e-46, Sum P(3) = 8.7e-46
Identities = 136/362 (37%), Positives = 200/362 (55%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMG-PLTEQQ-RVEMLSQLLQPVSELTSDTGSEEF 581
V+L+A + + L +R + +G PL + R +L LL PV T D +E
Sbjct: 340 VVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVP--TGDLNLDE- 396
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEP--GESDLT-AKVAHNDNSSI 638
I +T GF+ DL ALV +A L S + D P + DL A S
Sbjct: 397 ---IASRTPGFVVADLAALVREAA--LRAASRASADGRPPMLHQDDLLGALTVIRPLSRS 451
Query: 639 AATQV-MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 696
A+ +V +G L + + + A A PL H D F+ G+ GVLLYGPPG G
Sbjct: 452 ASDEVTVGDVTLDDVGDMAAAKQALT-EAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCG 510
Query: 697 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 756
KT + +A+A+ L+ +VKG EL++ ++G SEK VR++F++AR + P ++F DELD+LA
Sbjct: 511 KTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALA 570
Query: 757 PARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLL 816
P RG S DSG V DRVV+ +L E+DG+ D +D+ ++GA+NRPDLIDPALLRPGR ++L+
Sbjct: 571 PRRGQSFDSG-VSDRVVAALLTELDGI-DPLRDVVMLGATNRPDLIDPALLRPGRLERLV 628
Query: 817 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+V D + R +L+ + L DV L +A ++ AD AL +A A +R
Sbjct: 629 FVEP-PDAAARREILRTAGKSIPLSSDVDLDEVAAGLD-GYSAADCVALLREAALTAMRR 686
Query: 877 KV 878
+
Sbjct: 687 SI 688
Score = 153 (58.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 64/242 (26%), Positives = 107/242 (44%)
Query: 636 SSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
S+ + E ++ ++ ++ + A KL L L + G GVL+ GP G
Sbjct: 198 STAGQVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAG 257
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
GK L +AV L +++ GPE+ + G+ K V Q R V+ + D+
Sbjct: 258 VGKATLVRAVCDGRRL--VTLDGPEIGALAAGDRVKAVASAVQAVRHEGG-VLLITDADA 314
Query: 755 LAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 814
L PA V ++S++ + ++ + +I S RPD +D L P D+
Sbjct: 315 LLPAAAEP-----VASLILSELRTAV-----ATAGVVLIATSARPDQLDARLRSPELCDR 364
Query: 815 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 874
L + + D + R+ +L+AL D++L IA + P F AD+ AL +A AA
Sbjct: 365 ELGLPL-PDAATRKSLLEALLNPVPT-GDLNLDEIASRTP-GFVVADLAALVREAALRAA 421
Query: 875 KR 876
R
Sbjct: 422 SR 423
Score = 50 (22.7 bits), Expect = 8.7e-46, Sum P(3) = 8.7e-46
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSER-KTSAALAQAFNTAQSYS 456
+ VL+ G G GK T+VR V + ++ +A+ +R K A+ QA +
Sbjct: 248 LGVLVSGPAGVGKATLVRAVCDGRRLVTLDGPEIGALAAGDRVKAVASAVQAVR----HE 303
Query: 457 PTILLLRDFD 466
+LL+ D D
Sbjct: 304 GGVLLITDAD 313
Score = 40 (19.1 bits), Expect = 8.7e-46, Sum P(3) = 8.7e-46
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 345 ALVLGGSI--PSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAV 400
++ L GS ++PP L V GD V +L L P S S AV
Sbjct: 100 SVTLSGSTLATQSVPPVTLRQALLGKVMTVGDAVSLLPRDLGPGTSTSAASRALAAAV 157
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 431 (156.8 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 116/352 (32%), Positives = 190/352 (53%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+V++VA+ + + + P +RR F + + E+ R+++L QL ++ D +
Sbjct: 164 RVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKIL-QLY--TKKVNLDPSVD- 219
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAA 640
++ I +G++ DL AL +A + ++S+ + + V + N I
Sbjct: 220 -LQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITV 278
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTL 699
D V ++ KK+ A+ + P+ H F G+ G+LL+GPPG KT
Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAV---EWPIKHSAAFVKMGISPMRGILLHGPPGCSKTT 335
Query: 700 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 759
LAKA A +F S+ EL +MY+GE E +R+ FQ+AR A P +IFFDE D +A R
Sbjct: 336 LAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKR 395
Query: 760 G--ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 817
G +S +S V +R++S +L E+DGL ++ + + ++ A+NRP ID AL+RPGRFD +LY
Sbjct: 396 GDESSSNSSTVGERLLSTLLTEMDGLEEA-KGILVLAATNRPYAIDAALMRPGRFDLVLY 454
Query: 818 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
V D+ R +L+ TR L +DV L IA++ FTGA++ LC ++
Sbjct: 455 VPP-PDLEARFEILQVHTRNMTLGDDVDLRKIAEETDL-FTGAELEGLCRES 504
Score = 326 (119.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 89/247 (36%), Positives = 131/247 (53%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGT 695
+IA + E + ER+ + + P + PL + L GL+ G+LLYGPPGT
Sbjct: 11 NIAGNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTL---GLKWPRGLLLYGPPGT 67
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA----RPCVIFFDE 751
GKT L +AV EC + + + + + GESEK +R+ F +A S +P VIF DE
Sbjct: 68 GKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDE 127
Query: 752 LDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRP 809
+D L P R A + R+ SQ+ +D SS + ++ ++NR D IDPAL R
Sbjct: 128 IDVLCPRRDARREQDV---RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRA 184
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
GRFD L+ V ++ R ++L+ T+K L V L +IA C + GAD+ ALC +A
Sbjct: 185 GRFDALVEVSTPNEED-RLKILQLYTKKVNLDPSVDLQAIAISCN-GYVGADLEALCREA 242
Query: 870 WFHAAKR 876
A+KR
Sbjct: 243 TISASKR 249
Score = 106 (42.4 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL----MASSERKTSAALAQ 447
L LK+ +LL+G PG GK ++VR V + H++ S H++ SE+ A A+
Sbjct: 51 LGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAE 110
Query: 448 AFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSA 500
A + A S P+++ + + DV ++ V ++S++ +++ + +PS+
Sbjct: 111 ASSHAVSDKPSVIFIDEIDVL--CPRRDARREQDVRIASQLFTLM-DSNKPSS 160
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 505 (182.8 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 158/541 (29%), Positives = 268/541 (49%)
Query: 362 ISGSNDF-VPLQGDTVKILASILA-PTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRY 416
++ +N+F + + +K+L ++ P L P V L++ +LL G PG GK +VR
Sbjct: 281 LNNNNNFKIGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRT 340
Query: 417 VARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNES 476
V I ++ C + S +T L F A D + + SN
Sbjct: 341 VCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEAS----------DKSIAK---SNSP 387
Query: 477 LPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGL 536
+ V E+ ++ ++ S ++E + + + + ++++AA + +
Sbjct: 388 I----VVFIDEIDTICPPRSK-STQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQI 442
Query: 537 PPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQ--PVSELTS---DTGSEEFVKDIIGQT 589
+RR EI + +QQR+++L P+S S D ++E V +G
Sbjct: 443 DNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETV-GYVGAN 501
Query: 590 SGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
F+ RD A +A + NL++ N+E ++NE + L ++ ++ E L
Sbjct: 502 IQFLCRD-SAFIAFSKYNLLKYQNNEQNENENEKKYLIEIEDFRESIKNNPASILKGEHL 560
Query: 650 VKAMERSKKRNASALG--------APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLL 700
V+ + + L A + P L+K+ F GL G++LYGPPG KT L
Sbjct: 561 VENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTL 620
Query: 701 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 760
KAVA+ L+FLS+ G + + Y+G+SE+ +RDIF+KAR P ++FFDE+D++ R
Sbjct: 621 VKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRN 680
Query: 761 ASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYV 818
S +S G RV+S L E+DG+ + + +IGA+NR D+ID ALLRPGRFDK+L +
Sbjct: 681 LSDNSSGDNAQSRVLSTFLNEMDGV-EQLNGVIVIGATNRLDMIDNALLRPGRFDKILEI 739
Query: 819 GVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+ +S R ++LK T+ L ++V+L I+ F+GAD+ LC +A F + +R +
Sbjct: 740 KLPDQLS-RLKILKIKTKSIPLSDNVNLIEISN-LTNGFSGADLENLCREASFQSLRRDL 797
Query: 879 L 879
L
Sbjct: 798 L 798
Score = 307 (113.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 83/258 (32%), Positives = 130/258 (50%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+L +F + + G+LL GPPGTGKT L + V + +S+ ++ YIGE+
Sbjct: 306 PILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGET 365
Query: 729 EKNVRDIFQKA------RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG 782
E+N+R+IFQ+A +S P V+F DE+D++ P R S + RVV Q L +DG
Sbjct: 366 EENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQNES---RVVGQFLTLLDG 422
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
+ +L II A+NRP+ ID AL RPGR D+ + + V + R +LK K +
Sbjct: 423 IGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNK-QQRLDILKLYCSKLPISP 481
Query: 843 DVS--LYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY 900
S L IA + + GA++ LC D+ F A + L + ++E
Sbjct: 482 TPSNLLDQIADETV-GYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQNENENEKKYLIEI 540
Query: 901 DDFVKVLRELSPSLSMAE 918
+DF + ++ S+ E
Sbjct: 541 EDFRESIKNNPASILKGE 558
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 485 (175.8 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 113/254 (44%), Positives = 157/254 (61%)
Query: 670 PLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P + +F+ S LR ++GVLLYGPPGTGKT L +AT +L +SVKGPEL+ YIG+S
Sbjct: 739 PSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQS 798
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E+NVR++F +ARSARPCV+FFDE DSLAP RG DS GV DRVV+Q+L E+DG+ + Q
Sbjct: 799 EENVRNLFNRARSARPCVLFFDEFDSLAPKRGH--DSTGVTDRVVNQLLTELDGV-EGLQ 855
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
+ +I A++RP+L+DPALLR GR D+L+ + D R R+ +AL+ L E V
Sbjct: 856 GVTVIAATSRPELLDPALLRSGRIDRLVECPL-PDAPARVRIFEALSSTLSLDECVDFDW 914
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLR 908
A K N+TGAD+ ++ A A K + +I ++E F +
Sbjct: 915 FAGKTA-NYTGADIQSILTSANMAAVKEALAQFGHEKLAKKISLKQKHLIE--SF----Q 967
Query: 909 ELSPSLSMAELKKY 922
PSLS +++ KY
Sbjct: 968 TTRPSLSASDVAKY 981
Score = 77 (32.2 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 42/166 (25%), Positives = 71/166 (42%)
Query: 348 LGGSIPSALPPDLLISGSNDFVPLQGDTVKILASI---LAPTLCPSVLSLKFRVA-VLLH 403
+G I PP +S D + L + KI+ + L LC S + R VLL
Sbjct: 426 VGEIIKEETPPTSPLS-VQDLIQLP-EYDKIVDQVVQELRMNLCLSADNSVMRQCNVLLA 483
Query: 404 GLPGCGKRTVVRYVARRLGIHVVEYSCH----NLMASSERKTSAA---LAQAFNTAQSYS 456
G G GK +V + +L +Y CH + S RKT + L F + ++
Sbjct: 484 GASGTGKTVLVERILDQLS-RKPDY-CHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHA 541
Query: 457 PTILLLRDFDVFRNLVSNESLPNDQV--GLSSEVASVIREFTEPSA 500
P I++L + DV + +S + + ++ V +I ++T +A
Sbjct: 542 PAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNA 587
Score = 39 (18.8 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 24 DSMVERRKPLVLSSTKLLINSVLSSSRR 51
D + E+ PL SST + + + ++R
Sbjct: 200 DELTEKLTPLTHSSTVSNVKNTIQRNKR 227
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 422 (153.6 bits), Expect = 4.0e-44, Sum P(3) = 4.0e-44
Identities = 97/261 (37%), Positives = 153/261 (58%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + F++ G++ +G+LL+GPPG GKTL+AKAVA NF+S+KGPEL+N Y+GES
Sbjct: 524 PIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGES 583
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
E NVR +F +A+S+ PC++FFDELD+L P R + G RVV+ +L E+DG+ D Q
Sbjct: 584 EYNVRQLFSRAKSSAPCILFFDELDALVPTRDFT--MSGATSRVVNALLTELDGVGDR-Q 640
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE--RVLKALTRKFKLLEDV-- 844
+++IGA+NRPD ID A+ RPGR +YVG+ + + R + T D
Sbjct: 641 GIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGRAPDAVR 700
Query: 845 -SLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYD 901
++ +A+ +C FTGAD+ R++L R+ ++ ++ +
Sbjct: 701 KTIERVARDPRCG-KFTGADL-------------RQLLTAASEACMIRVQDDEAPMISEE 746
Query: 902 DFVKVLRELSPSLSMAELKKY 922
D+ + L E+ PS+ ++ KY
Sbjct: 747 DWERALDEVKPSVK--DIDKY 765
Score = 274 (101.5 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 69/203 (33%), Positives = 115/203 (56%)
Query: 663 ALGAPK-LPL-LHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
AL P LPL + ++ G + ++ +LL+GP GTGKT + +A+A F+ V L
Sbjct: 208 ALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSL 267
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV-MDRVVSQMLAE 779
++ GESEKN+R+ F +A PC++F DE+D +A + + V M +SQ L +
Sbjct: 268 VSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVRMSSEISQGLDK 327
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
I +++ +I A+NRPD I+P + R RF +L + + D + RE +L+ +TR +
Sbjct: 328 IVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQEL-EMSM-PDEAARESILRTMTRNKR 383
Query: 840 LLEDVSLYSIAKKCPPNFTGADM 862
L +DV ++A+ P + GAD+
Sbjct: 384 LSDDVDFTALAR-LTPGYVGADL 405
Score = 102 (41.0 bits), Expect = 4.0e-44, Sum P(3) = 4.0e-44
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K + A+LLHG G GK VVR +A L V S +L++ ++ + +AF+ A
Sbjct: 229 KPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIR 288
Query: 455 YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVA 489
+P +L L + DV + + V +SSE++
Sbjct: 289 LAPCLLFLDEVDVVAGKMDGAQKAME-VRMSSEIS 322
Score = 62 (26.9 bits), Expect = 4.0e-44, Sum P(3) = 4.0e-44
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 522 QQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
+ V+++AA + + + PT+RR F E+ M E R +L + + L+ D +F
Sbjct: 336 RNVVVIAATNRPDSIEPTVRRRFQ-ELEMSMPDEAARESILRTMTRN-KRLSDDV---DF 390
Query: 582 VKDIIGQTSGFMPRDLHALVADAGAN 607
+ T G++ DL A D A+
Sbjct: 391 TA-LARLTPGYVGADL-ATAVDFAAS 414
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 492 (178.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 142/416 (34%), Positives = 216/416 (51%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 381 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 440
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D E N+ VAS++ +E S G
Sbjct: 441 IFIDELDAL--CPKREGAQNEVE--KRVVASLLTLMDGIGSEG----SEG---------- 482
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
QVL++ A + L +RR F EI +G Q R+++L +LL+ V L ++
Sbjct: 483 ---QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEA- 538
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGAN----LIRKSNSEVDKNEPGESDLTAK---V 630
E ++ + G++ DL AL +AG + ++R+ + D G +T K
Sbjct: 539 --ELLQ-LANSAHGYVGADLKALCNEAGLHALRRVLRRQPNLPDSKMAGLVKITLKDFLQ 595
Query: 631 AHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL--GAPKLPLLHKDLFSS-GLRKRSGV 687
ND A +V V + N A + PL H + F+ G++ GV
Sbjct: 596 GMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGV 655
Query: 688 LLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 747
LLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+KAR+ P +I
Sbjct: 656 LLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSII 715
Query: 748 FFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
FFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ I+ A+NRPD ID
Sbjct: 716 FFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTILAATNRPDRID 770
Score = 416 (151.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 104/288 (36%), Positives = 155/288 (53%)
Query: 635 NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPP 693
NS A Q+ D++ + K + +LPL +LF S G+ GVLLYGPP
Sbjct: 331 NSKDQANQLKVTYDMIGGLNSQLKEIREII---ELPLKQPELFKSYGIPPPRGVLLYGPP 387
Query: 694 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 753
GTGKT++A+AVA E + GPE+I+ + GE+E +R IF +A P +IF DELD
Sbjct: 388 GTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELD 447
Query: 754 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGR 811
+L P R G V RVV+ +L +DG+ + + ++GA+NRP +D AL RPGR
Sbjct: 448 ALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGR 505
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
FDK + +GV + + + K L R LL + L +A + GAD+ ALC +A
Sbjct: 506 FDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAH-GYVGADLKALCNEAGL 564
Query: 872 HAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 919
HA +R VL ++ A V + DF++ + ++ PS +M E+
Sbjct: 565 HALRR-VLRRQPNLPDSKM--AGLVKITLKDFLQGMNDIRPS-AMREV 608
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 483 (175.1 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 128/361 (35%), Positives = 200/361 (55%)
Query: 524 VLLVAAADSS--EGLPPTIRRC---FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
V+LVA SS +G + R S +I + LT++ R E+ L +L ++
Sbjct: 608 VVLVAQRLSSLNDGFVEQVMRARPIVSRKIELEQLTKEDRCEIFETFL----DLPENS-- 661
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANL-IR--KSNSEVDKNEPGESDLTAKVAHNDN 635
+ + +I+ ++ G+ ++ L I+ K +E++ + E + K+ ++
Sbjct: 662 -DIISEIVKKSDGYTFSEIEKLAVSINVECAIKGVKYITEIEVEKAFECFVAGKMGKIED 720
Query: 636 SSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGT 695
+ T ED+ E+ K + K P L + S G+ G+LL+GP G
Sbjct: 721 GQVLPTM----EDVGGMFEQKKLLEQVIIWPRKYPQLFE---SVGVPVSKGILLHGPSGC 773
Query: 696 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSL 755
GKTLLA A + + + ++VKGPEL++ YIG SE+NVR +F+KARS PC++FFDELDSL
Sbjct: 774 GKTLLANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSL 833
Query: 756 APARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
AP RG DS GV DRVV+Q+L E+DG + + I+G ++R DLID ALLRPGRFD
Sbjct: 834 APKRGH--DSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHH 891
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+Y G + + + R ++K LT K K DV +A+K ++GAD+ L +A F+ A+
Sbjct: 892 VYCG-HPEKTERLDIMKVLTNKLKPT-DVDFECLAQKTD-GWSGADLQLLFTNAQFYNAR 948
Query: 876 R 876
+
Sbjct: 949 Q 949
Score = 62 (26.9 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA-----ALAQAFNTAQS 454
V++ G G GK T ++ +ARRL + C + + + SA L+ + +
Sbjct: 504 VMVLGGNGSGKTTFIKKLARRLSHNSSVTFCKMVPCALLKGRSADIIEKLLSDTLHEMEV 563
Query: 455 YSPTILLLRDFDVFRNLVSNE 475
P+ L L DFDV + E
Sbjct: 564 KKPSCLFLDDFDVILPQIDQE 584
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 460 (167.0 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 100/211 (47%), Positives = 138/211 (65%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +LF G+ G+LLYGPPGTGKTLLAKAVATE + F+ V G EL+ +IG
Sbjct: 187 ELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIG 246
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E V+DIF+ A+ P +IF DE+D++A A+ +GG + R + Q+LAE+DG
Sbjct: 247 EGASLVKDIFKLAKEKAPSIIFIDEIDAIA-AKRTDALTGGDREVQRTLMQLLAEMDGF- 304
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
D+ D+ IIGA+NRPD++DPA+LRPGRFD+++ V D R +LK TRK L EDV
Sbjct: 305 DARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPA-PDEKGRLEILKIHTRKMNLAEDV 363
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+L IAK GA++ A+C +A +A +
Sbjct: 364 NLEEIAKMTE-GCVGAELKAICTEAGMNAIR 393
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 480 (174.0 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 141/421 (33%), Positives = 217/421 (51%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 LLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVAS-VIREFTEPSAEDEDEESHGYFPVKEIEK 518
+ + + D P + G SEV V+ E S G
Sbjct: 450 IFIDELDAL--------CPKRE-GAQSEVEKRVVASLLTLMDGIGSEGSEG--------- 491
Query: 519 ICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
+VL++ A + + L +RR F EI +G Q R+++L +LL+ V L +
Sbjct: 492 ----RVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKA 547
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGA----NLIRKSNSEVDKNEPGESDLTAK--- 629
E ++ + G++ DL AL +AG ++RK + D G +T
Sbjct: 548 ---ELLR-LANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITLNDFL 603
Query: 630 VAHNDNSSIAATQV------MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLR 682
ND A +V + D + +E K + A+ + PL H FS G++
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSD-IGGLENIKLKLKQAV---EWPLKHPKSFSRMGIQ 659
Query: 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 742
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR++F+KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAV 719
Query: 743 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ ++ A+NRPD I
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLAATNRPDRI 778
Query: 803 D 803
D
Sbjct: 779 D 779
Score = 427 (155.4 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 116/327 (35%), Positives = 181/327 (55%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L +RR F EI +G Q R+++L +LL+ V L + E
Sbjct: 492 RVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKA---E 548
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGA----NLIRKSNSEVDKNEPGESDLTAK---VAHN 633
++ + G++ DL AL +AG ++RK + D G +T N
Sbjct: 549 LLR-LANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMN 607
Query: 634 DNSSIAATQV------MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSG 686
D A +V + D + +E K + A+ + PL H FS G++ G
Sbjct: 608 DIRPSAMREVAIDVPNVSWSD-IGGLENIKLKLKQAV---EWPLKHPKSFSRMGIQPPKG 663
Query: 687 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 746
VLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR++F+KAR+ P +
Sbjct: 664 VLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSI 723
Query: 747 IFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPAL 806
IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ ++ A+NRPD
Sbjct: 724 IFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLAATNRPD------ 776
Query: 807 LRPGRFDKLLYVGVNSDVSYRERVLKA 833
R DK++ V + + E +KA
Sbjct: 777 ----RIDKIIAVCKEAALLALEENIKA 799
Score = 402 (146.6 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 95/255 (37%), Positives = 144/255 (56%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ G+LLYGPPGTGKT++A+AVA E + GPE+I+ + G
Sbjct: 370 ELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYG 429
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
E+E +R IF +A P +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 430 ETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVEKRVVASLLTLMDGIGSE 487
Query: 787 SQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+ + ++GA+NRP +D AL RPGRFDK + +G+ + + + K L R LL
Sbjct: 488 GSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKA 547
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV 904
L +A + GAD+ ALC +A +A +R VL ++ A V + +DF+
Sbjct: 548 ELLRLANNAH-GYVGADLKALCNEAGLYALRR-VLRKQPNLPDSKV--AGMVKITLNDFL 603
Query: 905 KVLRELSPSLSMAEL 919
+ + ++ PS +M E+
Sbjct: 604 QGMNDIRPS-AMREV 617
Score = 57 (25.1 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 35/144 (24%), Positives = 60/144 (41%)
Query: 518 KICRQQVLLVAAADSSE-GLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
++C+ QVL V D + G P + H G +EQ +E S + +S S
Sbjct: 185 RLCKLQVLQVKGTDGTTLGKPQSSSGTDVH----GMASEQSSMES-SDV--DISFQLSQL 237
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNS 636
+E + Q++ P + + AG L+ + S D + G ++T D+S
Sbjct: 238 DLKE-PQSPASQSTPCKPINDRTM-NKAGEVLLDVTQSPRDGSGLGLEEITGLKCSFDSS 295
Query: 637 SIAATQVMGKEDLVKAMERSKKRN 660
TQ + +E L+K+ K N
Sbjct: 296 KEGNTQPISEEKLLKSTSAGAKNN 319
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 459 (166.6 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 123/338 (36%), Positives = 193/338 (57%)
Query: 544 FSHEISMGPLTEQQRVEMLSQLLQP-VSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVA 602
F +I++ L +R E+L+ + Q S++T D S EF+ +T G++ DL V
Sbjct: 503 FQIKIALPSLAVTRRKEILTTIFQENFSDITMD--SIEFISV---KTEGYLMTDLVLFVK 557
Query: 603 DAGANLIRKSNSEVDKNEPGESDLTAK-VAHNDNSSIAATQVMGKEDLVKA--------- 652
L+ S + V+K + G L K + Q+ K VK+
Sbjct: 558 ----RLL--SEAFVEKIQNGPKHLMNKGLIEKTLKDFVPLQLR-KAKFVKSSIRWIDIAG 610
Query: 653 MERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 711
M+ +K+ + +P K L++K LR +G+LL+G PG GKT LA A+++ +
Sbjct: 611 MQEAKEAVRDIIESPVKYSLIYKQC---RLRLPTGILLFGYPGCGKTYLASAISSTFPVQ 667
Query: 712 FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR 771
F+S+KGPEL++ YIG+SE+ VRD+F +A+ A+PCV+FFDE DS+AP RG DS GV DR
Sbjct: 668 FISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQ--DSTGVTDR 725
Query: 772 VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL 831
VV+Q+L ++DG +S ++I+ A+ RPD+IDPALLRPGR DKL++ + ++ R VL
Sbjct: 726 VVNQILTQMDGA-ESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEE-RLEVL 783
Query: 832 KALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
+ L +F + E+ ++ +T AD+ +L DA
Sbjct: 784 QKLANRFHI-ENAAMLKKLSTLTDGYTYADLSSLLYDA 820
Score = 70 (29.7 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEY----SCHNLMASSERKTSAALAQAFNTAQSY 455
+ ++G GCGK +V + ++ + + SC + SS K + F A+ Y
Sbjct: 375 IYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAERY 434
Query: 456 SPTILLLRDFDVFRNLVSNESLPNDQVGLSSE 487
P+I+ L D L+S+ + N ++G E
Sbjct: 435 EPSIIYLDDVHC---LISSSN-ENGELGFVEE 462
Score = 45 (20.9 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 890 IDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE-LLRD 927
+ + SVV+E ++ L++ SPSL+ E + L RD
Sbjct: 875 MSDSKSVVIEDYMLMEALKKNSPSLNSEEFEHLSNLYRD 913
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 463 (168.0 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 91/211 (43%), Positives = 144/211 (68%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P H + F G+ +G+LLYGPPG KTL+A+A+A+E +NFL+VKGPEL + ++G+S
Sbjct: 478 PQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDS 537
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
EK +RD+F +AR P ++FFDE+D++ +RG S S GV DRV++Q+L E+DGL SS+
Sbjct: 538 EKAIRDLFSRARQVAPTIVFFDEIDAVGSSRG-SEKSSGVSDRVLAQLLTELDGLEKSSR 596
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV-SLY 847
+ ++ A+NRPD +D ALLRPGR D+ +YVG+ +V+ R +L+ T+K K + V ++
Sbjct: 597 -VILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVT-RRAILEMRTKKMKFDDTVRTID 654
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAKRKV 878
+ +K ++GA++ A+C A A + +
Sbjct: 655 KLVEKTS-GYSGAELVAVCRTAAMFAMRESI 684
Score = 57 (25.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL-GIHVVEYSCHNLM 434
+VL+ GLPG GK +++ VA L G SC LM
Sbjct: 274 SVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELM 310
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 438 (159.2 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 128/436 (29%), Positives = 215/436 (49%)
Query: 487 EVASVIREFTEPSAEDEDE----ESHG---YF-PVKEIEK----ICRQQVLLVAAADSSE 534
++ IR+ P DED+ +++G Y P+K++EK + ++ L +S
Sbjct: 4 DIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDT 63
Query: 535 GLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT-GSEEFVKDIIGQTSGFM 593
GL P + + M + +V ++++ P +E ++ K ++G
Sbjct: 64 GLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVS 123
Query: 594 PRDLH-ALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMG-KEDLVK 651
P D+ + N + K +P + +T + + + V G KE + K
Sbjct: 124 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE----EKPDVTYNDVGGCKEQIEK 179
Query: 652 AMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 710
E +LP+LH + F G+ GVL YGPPGTGKTLLA+AVA
Sbjct: 180 MRE-----------VVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
Query: 711 NFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG-GVM 769
F+ V G EL+ Y+GE + VR++FQ ARS + C++FFDE+D++ AR G G +
Sbjct: 229 CFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEV 288
Query: 770 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 829
R + +++ ++DG D+ ++ ++ A+NRPD +DPALLRPGR D+ + G+ D+ R +
Sbjct: 289 QRTMLEIVNQLDGF-DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLESRTQ 346
Query: 830 VLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKVLXXXXXXXX 887
+ K TR D+ +A+ CP N TGAD+ ++C +A +A A+RK +
Sbjct: 347 IFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMYAIRARRKTVTEKDF--- 402
Query: 888 XRIDQADSVVVEYDDF 903
+D + V+ Y F
Sbjct: 403 --LDAVNKVIKGYQKF 416
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 432 (157.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 101/276 (36%), Positives = 157/276 (56%)
Query: 635 NSSIAATQVMGKEDLV-KAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGP 692
++S+ QV K D+ K + K++ ++PLLH + F + G+ GVL+YGP
Sbjct: 153 DASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGP 212
Query: 693 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 752
PGTGKTL A+AVA F+ V G EL+ Y+GE + VRD+FQ ARS + C+IFFDE+
Sbjct: 213 PGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEV 272
Query: 753 DSLAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP 809
D++ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPALLRP
Sbjct: 273 DAIGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALLRP 329
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
GR D+ + G+ D+ R + + D+ +A+ CP N TGAD+ ++C +A
Sbjct: 330 GRLDRKVEFGL-PDLEGRAHIFTIHAKTMSCARDIRFELLARLCP-NSTGADIRSVCTEA 387
Query: 870 WFHA--AKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
A A+RKV+ ++ D V+ Y F
Sbjct: 388 GMFAIRARRKVVSEKDF-----LEAIDKVIKSYAKF 418
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 446 (162.1 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 148/504 (29%), Positives = 245/504 (48%)
Query: 400 VLLHGLPGCGKRTVVRYVAR-RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPT 458
++LHG G GK ++ +V+R R G S H + AS + K + F T + +
Sbjct: 247 LVLHGGSGTGKTMLLDHVSRTRWG------SVHRVKASDKSKD---IQDIFQTVTGQARS 297
Query: 459 ILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIE- 517
I+L+ D D E + ++ S+ + +++ D+E P K I
Sbjct: 298 IVLIDDLD--------ELIDKERANRSTVINALVEGLVSVRQAICDKEK----PPKVIVI 345
Query: 518 KICRQQVLLVAAADSSEGLPPTIRRCF--SHEISMGPLTEQQRVEMLSQLLQPVSELTSD 575
CR + +V P +RR + I + P+ +R ++S L P D
Sbjct: 346 AACRDYITIV---------PEKLRRPYRLQRAILLPPMDMSRRTAVISSLNPPFHP---D 393
Query: 576 TGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAK-----V 630
E+ + D+ +T + DL L++ + K + + ESD+ K
Sbjct: 394 V-KEQIICDLSDRTHAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTESDVRPKPPADTA 452
Query: 631 AHNDNSSIAATQVM--GKEDLVKAMERSKKRNASALGAPKLPL---LH-----KDLFSSG 680
+ D+ A ++ +D+ + + S + K L +H K+
Sbjct: 453 FYTDSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVHFITRPKEEIQKF 512
Query: 681 LR-KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
+R G LLYGPPG KT+ A+A+ATE LNF +VKG EL+NMY+GESE+ +RD+F +A
Sbjct: 513 IRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESERQIRDLFSRA 572
Query: 740 RSARPCVIFFDELDSLAPAR-GASGDSGGVMDR----VVSQMLAEIDGLNDSSQDLFIIG 794
R+A P +IFFDE+DS+A +R G D GG + V++ +L E+DG D + +F++
Sbjct: 573 RAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDL-RGVFVLA 631
Query: 795 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 854
A+NRP +DPA++RPGRFD+++YV D + RE +L+ + +L DV +A+
Sbjct: 632 ATNRPHALDPAIMRPGRFDEIIYVPP-PDPAAREAILRKNSAGCQLAPDVDFARLAQLTE 690
Query: 855 PNFTGADMYALCADAWFHAAKRKV 878
N +GA++ C A A +R +
Sbjct: 691 GN-SGAEVAGTCQSAGKLAMRRSL 713
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 442 (160.7 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 148/543 (27%), Positives = 254/543 (46%)
Query: 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTA 452
S +F L+ G CGK ++ RR + + ++ S +T L + F A
Sbjct: 216 SHRFPTTALVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAA 275
Query: 453 QSYSPTILLLRDFD----VFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESH 508
Q++ + L +F F L+S + + + E ++ T + D S+
Sbjct: 276 QTFKEKLRPLCNFHSVCFTFEILISFIFIV--PIVILIEDLELLCPST--AVADAKNSSN 331
Query: 509 GYFPVKEIEKICR---QQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQL 565
E+ K+ + ++ +A + + L RR F E+++ +E QR +++ L
Sbjct: 332 SLRISAELYKLLDALPRGIICLATSGVPDSLHEHARRRFVREVTINMPSEGQRRQLVEHL 391
Query: 566 LQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESD 625
+ V EL S+ ++ I T G++ DL L+ L+ K + +++
Sbjct: 392 CE-VHELNI---SQTLLEHIARNTQGYVIADLTLLLRRVQQQLLTKDDFDIEHIFLKSLS 447
Query: 626 LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKR-NASALGAPKLPLLHKDLFSS-GLRK 683
T A ++ + +++ +++ ME K+ S L + F+ GL
Sbjct: 448 QTQPSASR-STDVRVSKMTAGFEVIGGMEALKRTLQVSVLAG----IRQSAAFARFGLSL 502
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
GVLLYGPPG KT +AK +A E + F++ E+ + Y+G +E+ + IF AR
Sbjct: 503 PKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNA 562
Query: 744 PCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGL--NDSSQDLFIIGASNRP 799
PC+IF DE+DSL R S GG V R++S +L E++G+ S Q + ++ A+NRP
Sbjct: 563 PCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNRP 622
Query: 800 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 859
D+ID ALLRPGRFDKL++V + S R +LK +++ E+V L IA + ++G
Sbjct: 623 DMIDDALLRPGRFDKLIHVPAPDEKS-RLALLKLHSQRMPFHENVFLQEIAARTD-RYSG 680
Query: 860 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 919
AD+ LC +A A +R + +E DF KVL + SL+ +++
Sbjct: 681 ADLCNLCNEAAIEAFQRDF---------------KATEIELQDFEKVLTKQKSSLTQSQI 725
Query: 920 KKY 922
Y
Sbjct: 726 DGY 728
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 452 (164.2 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 92/208 (44%), Positives = 142/208 (68%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+ + +++ G+ K G+LLYGPPG GKT+LAKA++ E NF+++KGPE++N Y+GE
Sbjct: 694 LPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVGE 753
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 787
SEK VR+IF A +PC+IFFDE+DS+ R ++ S DRVV+Q+L+E+DGL+
Sbjct: 754 SEKKVREIFSYASVYKPCLIFFDEIDSICINR-SNNKSVSASDRVVNQLLSEMDGLSQR- 811
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERV--LKALTRKFKLLEDVS 845
+ ++II +NRPD+ID ALLR GRFD+L+Y+ + Y+ RV LK L++ + ++V
Sbjct: 812 EGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPK---YQGRVDILKKLSKNMPIDKNVR 868
Query: 846 LYSIAKKCPPNFTGADMYALCADAWFHA 873
I+K ++GAD+Y + ++ F A
Sbjct: 869 FEEISK-LTRGYSGADLYGVLRESAFIA 895
Score = 43 (20.2 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 611 KSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
K N ++ +E ++ L + ND + IA+T++
Sbjct: 561 KQNDQLTSHE--QNILITSIKTNDENQIASTEI 591
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 404 (147.3 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 202 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 261
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 262 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 321
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 322 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 378
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 379 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 436
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 437 FAIRARRKI 445
Score = 40 (19.1 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 134 PPTTRKQVCDGDVHSKHSSPTMLTFPSI 161
PP TRK +C+ H+ P L P +
Sbjct: 22 PPETRKVLCN------HTGPEALGAPKM 43
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 416 (151.5 bits), Expect = 6.4e-38, P = 6.4e-38
Identities = 96/235 (40%), Positives = 145/235 (61%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA- 705
D+V +++ K + +LP+ H +LF S G+ + GV+LYGPPGTGKTLLA+AVA
Sbjct: 144 DMVGGLDKQIKEIKEVI---ELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 200
Query: 706 -TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 764
TEC F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ +R G
Sbjct: 201 HTECK--FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR-VEGS 257
Query: 765 SGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 822
SGG + R + ++L ++DG +SS+D+ II A+NR D++DPALLRPGR D+ + +
Sbjct: 258 SGGDSEVQRTMLELLNQLDGF-ESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPT 316
Query: 823 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
V+ R +LK +R L ++L IA+K +GAD+ +C +A +A + +
Sbjct: 317 -VAARTDILKIHSRSMNLTRGINLRKIAEKMN-GCSGADVKGVCTEAGMYALRER 369
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 414 (150.8 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 90/233 (38%), Positives = 141/233 (60%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D+V +++ K + +LP+ H +LF S G+ + GVLLYGPPGTGKTLLA+AVA
Sbjct: 145 DMVGGLDKQIKEIKEVI---ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 201
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ +RG SG G
Sbjct: 202 HTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGG 261
Query: 767 G--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 824
G + R + ++L ++DG +S++++ ++ +NR D++DPALLRPGR D+ + D
Sbjct: 262 GDSEVQRTMLELLNQLDGF-ESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDA 320
Query: 825 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
R +LK +RK L ++L I+ K +GA++ A+C +A +A + +
Sbjct: 321 G-RLDILKIHSRKMNLTRGINLKKISDKMN-GASGAELKAVCTEAGMYALRER 371
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 411 (149.7 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 94/249 (37%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ ARS + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + G+ D R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKVEFGL-PDQDGRSHIFKIHARSMSVERDIRFDLLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RKV
Sbjct: 395 FAIRARRKV 403
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 411 (149.7 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 116/373 (31%), Positives = 199/373 (53%)
Query: 515 EIEKICRQQVLLVAAADSSEGL-PPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+I+++ ++ L +S GL PP + +++ T Q E Q+ + +T
Sbjct: 51 DIQQLLKKINELTGIKESDTGLAPPAL-----WDLAADKQTLQS--EQPLQVARCTKIIT 103
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG-ESDLTAKVAH 632
+D+ +++ ++ Q + F+ DL VA ++ VD+N+ L K+
Sbjct: 104 ADSEDPKYIINV-KQFAKFVV-DLSDQVAPT--DIEEGMRVGVDRNKYQIHIPLPPKI-- 157
Query: 633 NDNSSIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLY 690
+ ++ QV K D+ + K L + PLLH + F + G+ GVLL+
Sbjct: 158 --DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLF 215
Query: 691 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 750
GPPGTGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFD
Sbjct: 216 GPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 275
Query: 751 ELDSLAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALL 807
E+D++ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+
Sbjct: 276 EIDAIGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALM 332
Query: 808 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 867
RPGR D+ + + D+ R +LK R + D+ +A+ CP N TGA++ ++C
Sbjct: 333 RPGRLDRKIEFSL-PDLEGRTHILKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCT 390
Query: 868 DAWFHA--AKRKV 878
+A A A+RK+
Sbjct: 391 EAGMFAIRARRKI 403
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 428 (155.7 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 89/193 (46%), Positives = 129/193 (66%)
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
+GVL+ GPPGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A+ A P
Sbjct: 190 TGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASP 249
Query: 745 CVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
C+IF DE+D++ RGA G GG +R ++QML E+DG + ++ + +I A+NRPD++
Sbjct: 250 CIIFIDEIDAVGRQRGA-GVGGGHDEREQTLNQMLVEMDGF-EGNEGIIVIAATNRPDVL 307
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
DPALLRPGRFD+ + VG+ DV RE++LK RK L DV IA+ P F+GAD+
Sbjct: 308 DPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRKVPLANDVEPSLIARGTP-GFSGADL 365
Query: 863 YALCADAWFHAAK 875
L +A AA+
Sbjct: 366 ANLVNEAALFAAR 378
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 428 (155.7 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 89/193 (46%), Positives = 129/193 (66%)
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
+GVL+ GPPGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A+ A P
Sbjct: 190 TGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASP 249
Query: 745 CVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
C+IF DE+D++ RGA G GG +R ++QML E+DG + ++ + +I A+NRPD++
Sbjct: 250 CIIFIDEIDAVGRQRGA-GVGGGHDEREQTLNQMLVEMDGF-EGNEGIIVIAATNRPDVL 307
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 862
DPALLRPGRFD+ + VG+ DV RE++LK RK L DV IA+ P F+GAD+
Sbjct: 308 DPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRKVPLANDVEPSLIARGTP-GFSGADL 365
Query: 863 YALCADAWFHAAK 875
L +A AA+
Sbjct: 366 ANLVNEAALFAAR 378
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 391 (142.7 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 83/217 (38%), Positives = 136/217 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPLL + F++ G+ G+LLYGPPGTGKTL A+AVA F+ V G EL+ Y+G
Sbjct: 226 ELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 285
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GASGDSGGVMDRVVSQMLAEIDGL 783
E + VR++F+ AR+ + C+IFFDE+D++ AR GA GD+ + R + +++ ++DG
Sbjct: 286 EGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNE--VQRTMLELITQLDGF 343
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
D ++ ++ A+NRP+ +DPALLRPGR D+ + + D+ R + + ++ +
Sbjct: 344 -DPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL-PDLEGRANIFRIHSKSMSVERG 401
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 878
+ I++ CP N TGA++ ++C +A A A+RKV
Sbjct: 402 IRWELISRLCP-NSTGAELRSVCTEAGMFAIRARRKV 437
Score = 46 (21.3 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 500 AEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC-FSHEISMGPLTEQQR 558
A+++DE++ +K+I K V+ D EG+ + R ++ E+ + P +
Sbjct: 136 ADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPS- 194
Query: 559 VEMLSQLLQPVSELT-SDTG 577
V M++ +P ++T SD G
Sbjct: 195 VTMMTVEEKP--DVTYSDVG 212
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 433 (157.5 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 158/573 (27%), Positives = 273/573 (47%)
Query: 390 SVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAF 449
S L + ++LL+G CGK T++ +++++GI + + +L+ + T L + +
Sbjct: 328 SELGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLV-KYQPNTKGLLLKYY 386
Query: 450 NTAQSYSPTILLLRD-----FDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
Q+ + +LL D F F N S+ N Q +++ ++ E+ D
Sbjct: 387 QAKQNTTTNSILLFDNIDEIFPQFDNTDSSNKNSNQQN--INQLMNLFLNLLNNDNENND 444
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQ 564
E++ F + KI ++L IR F EI + P +++R ++ +
Sbjct: 445 NENNNIFIIGITNKI---KIL-----------NNFIRSNFEEEIRIDPPNQEKRKQIFNW 490
Query: 565 LLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK---SNSEVDKNEP 621
L+ E + + + ++ I ++G M D+ L +A +++ N + D +E
Sbjct: 491 NLKGFGENIEN--NLKIIEKINENSNGLMGGDITILCRNAKIKSLKRYKIENEKQDDDEG 548
Query: 622 GESDLTAKVAHND-----NSSIAATQVMGKED--LVKAMERS-KKRNASALGAPKLP--L 671
GE L ND N I ++D ++ + S K S +G ++ +
Sbjct: 549 GEELLIKSFNLNDIKFLENDFIEEFGGQYRKDKTMISKISPSIPKVLWSDIGGLEVAKDV 608
Query: 672 L---------HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721
L H D G++ G+L+YGPPGTGKT+LAK VA E NF+ + ELI
Sbjct: 609 LKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKANFIPINISELI 668
Query: 722 NMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEID 781
IGESEK + +IF+ A ++ P +IF DE+ S+ + +S +S +++SQ+L E+D
Sbjct: 669 QGEIGESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLKESSNNSS---KKLISQLLIELD 725
Query: 782 ---GLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF 838
G ND + I+ A+N P IDP+ LR GRFDK +Y+G +V R+ + + L +
Sbjct: 726 NTIGNNDGGNRVMILAATNMPQAIDPSFLRSGRFDKTVYIGP-PEVDERKSIFETLIKNS 784
Query: 839 KLLED--VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSV 896
+ D V L +AK NFTG+D+ AL + +A +R + S+
Sbjct: 785 SIKVDSTVDLNQLAKYTI-NFTGSDINALLKKSGLYAIQRDI-------------NVTSI 830
Query: 897 VVEYDDFVKVLRELSPSLS---MAELKKYELLR 926
+ DD +KV E+ PS+S + +LK++E R
Sbjct: 831 TM--DDIMKVFWEMKPSVSPDQIFQLKQWEKSR 861
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 410 (149.4 bits), Expect = 2.8e-37, P = 2.8e-37
Identities = 110/321 (34%), Positives = 173/321 (53%)
Query: 561 MLSQLLQPVSELT----SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV 616
++ Q L+ V + T S TGS +V+ I+ + R+L L A L + SN+ V
Sbjct: 83 VIGQFLEAVDQNTGIVGSTTGSNYYVR-ILST----IDREL--LKPSASVALHKHSNALV 135
Query: 617 DKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDL 676
D P E+D + + D + +G D M++ + R A +LPL H +L
Sbjct: 136 DVLPP-EADSSISMLQPDEKPDVSYADIGGMD----MQKQEIREAV-----ELPLTHFEL 185
Query: 677 FSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDI 735
+ G+ GVL+YGPPG GKT+LAKAVA + +F+ V G E + Y+GE + VRD+
Sbjct: 186 YKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDV 245
Query: 736 FQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIG 794
F+ A+ P +IF DE+D++A R A + + R++ ++L ++DG D + ++ +I
Sbjct: 246 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTTNVKVIM 304
Query: 795 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 854
A+NR D +DPALLRPGR D+ + + D + V +T K L EDV L + P
Sbjct: 305 ATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLVFSTITSKMNLSEDVDLEEFVAR-P 362
Query: 855 PNFTGADMYALCADAWFHAAK 875
+GAD+ A+C +A HA +
Sbjct: 363 DKISGADINAICQEAGMHAVR 383
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 423 (154.0 bits), Expect = 3.5e-37, Sum P(2) = 3.5e-37
Identities = 92/204 (45%), Positives = 135/204 (66%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G R SG+LL G PGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A
Sbjct: 183 GGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA 242
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASN 797
+ A PC+IF DE+D++ RGA G GG +R ++QML E+DG + ++ + +I A+N
Sbjct: 243 KKAAPCIIFIDEIDAVGRQRGA-GMGGGHDEREQTLNQMLVEMDGF-EGNEGVIVIAATN 300
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++DPALLRPGRFD+ + VG+ D+ RE++LK RK L +DV IA+ P F
Sbjct: 301 RPDVLDPALLRPGRFDRQVTVGL-PDIRGREQILKVHMRKVPLGDDVKAEVIARGTP-GF 358
Query: 858 TGADMYALCADAWFHAAK--RKVL 879
+GAD+ L +A AA+ R+V+
Sbjct: 359 SGADLANLVNEAALCAARTARRVV 382
Score = 48 (22.0 bits), Expect = 3.5e-37, Sum P(2) = 3.5e-37
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 225 LIKLGLQSVGQLPKYASHLRVSFV 248
L+K G+++ G+LP+ S L FV
Sbjct: 83 LVKQGVRAEGKLPEETSFLTTIFV 106
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 409 (149.0 bits), Expect = 3.6e-37, P = 3.6e-37
Identities = 118/371 (31%), Positives = 195/371 (52%)
Query: 515 EIEKICRQQVLLVAAADSSEGL-PPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+IE ++ L +S GL PP + +I+ QQ E Q+ + +T
Sbjct: 53 DIENCLKKVNELSGVKESDTGLAPPAL-----WDIAADKQAMQQ--EQPLQVARCTKIIT 105
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG-ESDLTAKVAH 632
SD ++ ++ Q + F+ DL VA ++ VD+N+ L AK+
Sbjct: 106 SDKHDPRYLINV-KQFAKFVV-DLADSVAPT--DIEEGMRVGVDRNKYQIHLPLPAKI-- 159
Query: 633 NDNSSIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLY 690
+ ++ QV K D+ + K L + PLLH + + + G+ GVLLY
Sbjct: 160 --DPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLY 217
Query: 691 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 750
GPPGTGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFD
Sbjct: 218 GPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 277
Query: 751 ELDSLAPARGASGDSG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP 809
E+D++ AR G G + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RP
Sbjct: 278 EIDAVGGARFDDGQGGDNEVQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRP 336
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
GR D+ + + D++ R +LK ++ + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 GRLDRKVEFAL-PDLAGRAHILKIHAKQMSVERDIRYDLLARLCP-NSTGAEIRSVCTEA 394
Query: 870 WFHA--AKRKV 878
A A+RKV
Sbjct: 395 GMFAIRARRKV 405
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 409 (149.0 bits), Expect = 3.6e-37, P = 3.6e-37
Identities = 118/371 (31%), Positives = 195/371 (52%)
Query: 515 EIEKICRQQVLLVAAADSSEGL-PPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+IE ++ L +S GL PP + +I+ QQ E Q+ + +T
Sbjct: 53 DIENCLKKVNELSGVKESDTGLAPPAL-----WDIAADKQAMQQ--EQPLQVARCTKIIT 105
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG-ESDLTAKVAH 632
SD ++ ++ Q + F+ DL VA ++ VD+N+ L AK+
Sbjct: 106 SDKHDPRYLINV-KQFAKFVV-DLADSVAPT--DIEEGMRVGVDRNKYQIHLPLPAKI-- 159
Query: 633 NDNSSIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLY 690
+ ++ QV K D+ + K L + PLLH + + + G+ GVLLY
Sbjct: 160 --DPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLY 217
Query: 691 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 750
GPPGTGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFD
Sbjct: 218 GPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 277
Query: 751 ELDSLAPARGASGDSG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP 809
E+D++ AR G G + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RP
Sbjct: 278 EIDAVGGARFDDGQGGDNEVQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRP 336
Query: 810 GRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
GR D+ + + D++ R +LK ++ + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 GRLDRKVEFAL-PDLAGRAHILKIHAKQMSVERDIRYDLLARLCP-NSTGAEIRSVCTEA 394
Query: 870 WFHA--AKRKV 878
A A+RKV
Sbjct: 395 GMFAIRARRKV 405
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 397 (144.8 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 88/215 (40%), Positives = 138/215 (64%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA--TECSLNFLSVKGPELINMY 724
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA TEC+ F+ V G EL+ +
Sbjct: 165 ELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT--FIRVSGSELVQKF 222
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG-GVMDRVVSQMLAEIDGL 783
IGE + VR++F AR P +IF DE+DS+ +R SG G + R + ++L ++DG
Sbjct: 223 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 282
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLE 842
++++++ +I A+NR D++DPALLRPGR D K+ + N + R +LK +RK L
Sbjct: 283 -EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTR 339
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 340 GINLRKIAELMP-GASGAEVKGVCTEAGMYALRER 373
Score = 38 (18.4 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
D+ +N+ N+ PN +V L +E
Sbjct: 97 DLDKNIDINDVTPNCRVALRNE 118
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 408 (148.7 bits), Expect = 4.6e-37, P = 4.6e-37
Identities = 111/328 (33%), Positives = 171/328 (52%)
Query: 555 EQQRVEMLSQLLQPVSELT-SDTGSEEFVKDIIGQTSG---FMPRDLHALVADAGANLIR 610
E +R+ + L+ + E+ S+TG V+ G T D L A L R
Sbjct: 63 EVKRIRSVPLLIGQLLEMVDSNTG---IVQSTSGSTLCVRILSTIDRELLKPSASVALQR 119
Query: 611 KSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLP 670
SN+ VD P ESD + + D + +G D+ K R A +LP
Sbjct: 120 HSNALVDTLPP-ESDSSIHLLGADEKPSESYSDIGGGDIQKQEMRE---------AVELP 169
Query: 671 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 729
L H +L+ G+ GVLLYGPPGTGKT+LAKAVA S F+ V G E + Y+GE
Sbjct: 170 LTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGP 229
Query: 730 KNVRDIFQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
+ VRD+F+ AR P +IF DE+D++A R A + + R++ ++L ++DG D S
Sbjct: 230 RLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGF-DVSV 288
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 848
++ +I A+NR D +DPALLRPGR D+ + + D + + + +T K L ++V L
Sbjct: 289 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFQVITSKMNLSDEVDLED 347
Query: 849 IAKKCPPNFTGADMYALCADAWFHAAKR 876
+ P +GA++ ++C +A HA ++
Sbjct: 348 YVSR-PDKLSGAEIQSICQEAGMHAIRK 374
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 423 (154.0 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 93/229 (40%), Positives = 143/229 (62%)
Query: 650 VKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709
V ++ K+ A + K P + +L G R GVLL+G PGTGKTLLA+A+A E
Sbjct: 160 VAGIDEVKEELAEIVEFLKNPRKYNEL---GARIPKGVLLFGQPGTGKTLLARAIAGEAG 216
Query: 710 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 769
+ F S+ G + + M++G VRD+F++A+ PC++F DE+D++ RGA G GG
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA-GLGGGHD 275
Query: 770 DR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYR 827
+R ++Q+L E+DG N S++ + II A+NRPD++DPALLRPGRFD+ + V D++ R
Sbjct: 276 EREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT-PDINGR 333
Query: 828 ERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ +LK + L +DV L +A++ P FTGAD+ + +A AA+R
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTP-GFTGADLANMVNEAALLAARR 381
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 423 (154.0 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 93/229 (40%), Positives = 143/229 (62%)
Query: 650 VKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709
V ++ K+ A + K P + +L G R GVLL+G PGTGKTLLA+A+A E
Sbjct: 160 VAGIDEVKEELAEIVEFLKNPRKYNEL---GARIPKGVLLFGQPGTGKTLLARAIAGEAG 216
Query: 710 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 769
+ F S+ G + + M++G VRD+F++A+ PC++F DE+D++ RGA G GG
Sbjct: 217 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA-GLGGGHD 275
Query: 770 DR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYR 827
+R ++Q+L E+DG N S++ + II A+NRPD++DPALLRPGRFD+ + V D++ R
Sbjct: 276 EREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT-PDINGR 333
Query: 828 ERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ +LK + L +DV L +A++ P FTGAD+ + +A AA+R
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTP-GFTGADLANMVNEAALLAARR 381
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 430 (156.4 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 85/172 (49%), Positives = 124/172 (72%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P +K+++ + G+LLYGPPG KTL AKA+A+E +NF+SVKGPE+ + Y+GES
Sbjct: 854 PKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGES 913
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
EK++R+IF+KAR PCVIFFDE+DS+A R + + V +RV+ Q+L EIDG+ +
Sbjct: 914 EKSIRNIFKKARENHPCVIFFDEIDSIAVNR--NNNQNFVSNRVLCQLLNEIDGIKNRL- 970
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840
++ I+ A+NRPDLIDPAL+RPGRFD+++YV + + S R +LK + FK+
Sbjct: 971 NVIILAATNRPDLIDPALMRPGRFDRIIYVPL-PNYSSRFAILKKNLKFFKI 1021
Score = 106 (42.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 44/175 (25%), Positives = 88/175 (50%)
Query: 715 VKGPELINMYIGESEKNVRDIF----QKARSARPC-VIFFDELDSLAPARGASGDSGGVM 769
+K +LI+ Y K + ++F ++ + C +IF DE++ L R + + M
Sbjct: 524 LKSTDLID-YNNTGYK-INELFLRCHKRYQEENKCTIIFIDEIEILCKKREENNN----M 577
Query: 770 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 829
+ S +L +DG+ + + +IGA+N + ID AL R GRFDK + V + + ++R
Sbjct: 578 NIYTSVLLNNMDGIKKHTHTI-LIGATNYINKIDLALRRSGRFDKEIEVNLPN---LKDR 633
Query: 830 VLKALTRKFKLLED----VSLYSIAKKCPPNFTGADMYALCADAWF-HAAKRKVL 879
+ +K L++ ++ +A C +FT +D+ +L + F + + K++
Sbjct: 634 I-SIFQKKLNLIKHNIGKKKIHKLADLCQ-SFTCSDINSLINISMFLNLKENKII 686
Score = 88 (36.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 710
+PL++K ++ + + G+LL+GPPG GKT +A + E SL
Sbjct: 442 IPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEELSL 484
Score = 63 (27.2 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG PGCGK + + L + ++ C ++ KTS L N +
Sbjct: 461 ILLHGPPGCGKTYIALLIKEELSLLKKKF-C----TITQNKTSKQLNNTKNDNNYNNDDN 515
Query: 460 LLLRDFDVFRN 470
+++ + ++ ++
Sbjct: 516 IIIPEIEILKS 526
Score = 38 (18.4 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
K+ ++ + L + K ++GA++ +C +A
Sbjct: 1100 KYTDIKFIKLCHVLAKKTKKYSGAEIVNICREA 1132
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 430 (156.4 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 85/172 (49%), Positives = 124/172 (72%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P +K+++ + G+LLYGPPG KTL AKA+A+E +NF+SVKGPE+ + Y+GES
Sbjct: 854 PKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGES 913
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQ 788
EK++R+IF+KAR PCVIFFDE+DS+A R + + V +RV+ Q+L EIDG+ +
Sbjct: 914 EKSIRNIFKKARENHPCVIFFDEIDSIAVNR--NNNQNFVSNRVLCQLLNEIDGIKNRL- 970
Query: 789 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840
++ I+ A+NRPDLIDPAL+RPGRFD+++YV + + S R +LK + FK+
Sbjct: 971 NVIILAATNRPDLIDPALMRPGRFDRIIYVPL-PNYSSRFAILKKNLKFFKI 1021
Score = 106 (42.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 44/175 (25%), Positives = 88/175 (50%)
Query: 715 VKGPELINMYIGESEKNVRDIF----QKARSARPC-VIFFDELDSLAPARGASGDSGGVM 769
+K +LI+ Y K + ++F ++ + C +IF DE++ L R + + M
Sbjct: 524 LKSTDLID-YNNTGYK-INELFLRCHKRYQEENKCTIIFIDEIEILCKKREENNN----M 577
Query: 770 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 829
+ S +L +DG+ + + +IGA+N + ID AL R GRFDK + V + + ++R
Sbjct: 578 NIYTSVLLNNMDGIKKHTHTI-LIGATNYINKIDLALRRSGRFDKEIEVNLPN---LKDR 633
Query: 830 VLKALTRKFKLLED----VSLYSIAKKCPPNFTGADMYALCADAWF-HAAKRKVL 879
+ +K L++ ++ +A C +FT +D+ +L + F + + K++
Sbjct: 634 I-SIFQKKLNLIKHNIGKKKIHKLADLCQ-SFTCSDINSLINISMFLNLKENKII 686
Score = 88 (36.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 710
+PL++K ++ + + G+LL+GPPG GKT +A + E SL
Sbjct: 442 IPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEELSL 484
Score = 63 (27.2 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG PGCGK + + L + ++ C ++ KTS L N +
Sbjct: 461 ILLHGPPGCGKTYIALLIKEELSLLKKKF-C----TITQNKTSKQLNNTKNDNNYNNDDN 515
Query: 460 LLLRDFDVFRN 470
+++ + ++ ++
Sbjct: 516 IIIPEIEILKS 526
Score = 38 (18.4 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 837 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 869
K+ ++ + L + K ++GA++ +C +A
Sbjct: 1100 KYTDIKFIKLCHVLAKKTKKYSGAEIVNICREA 1132
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 424 (154.3 bits), Expect = 6.8e-37, P = 6.8e-37
Identities = 92/204 (45%), Positives = 135/204 (66%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G R +GVL+ GPPGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A
Sbjct: 186 GGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQA 245
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASN 797
+ + PC+IF DE+D++ RGA G GG +R ++QML E+DG + ++ + +I A+N
Sbjct: 246 KKSAPCIIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQMLVEMDGF-EGNEGIIVIAATN 303
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++D ALLRPGRFD+ + VG+ DV RE++LK RK L EDV IA+ P F
Sbjct: 304 RPDVLDSALLRPGRFDRQVVVGL-PDVRGREQILKVHMRKVPLSEDVKASVIARGTP-GF 361
Query: 858 TGADMYALCADAWFHAAK--RKVL 879
+GAD+ L +A AA+ R+V+
Sbjct: 362 SGADLANLVNEAALFAARGNRRVV 385
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 423 (154.0 bits), Expect = 7.9e-37, P = 7.9e-37
Identities = 87/192 (45%), Positives = 128/192 (66%)
Query: 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 745
GVL+ GPPGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A+ A PC
Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246
Query: 746 VIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803
+IF DE+D++ RGA G GG +R ++QML E+DG + ++ + +I A+NRPD++D
Sbjct: 247 IIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQMLVEMDGF-EGNEGIIVIAATNRPDVLD 304
Query: 804 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 863
PALLRPGRFD+ + VG+ DV RE++LK R+ L D+ IA+ P F+GAD+
Sbjct: 305 PALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLAPDIDAAIIARGTP-GFSGADLA 362
Query: 864 ALCADAWFHAAK 875
L +A AA+
Sbjct: 363 NLVNEAALFAAR 374
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 405 (147.6 bits), Expect = 9.7e-37, P = 9.7e-37
Identities = 92/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RKV
Sbjct: 395 FAIRARRKV 403
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 426 (155.0 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL +LF S G+ GVLLYGPPGTGKTL+AKA+A E + + GPE+I+ + G
Sbjct: 335 ELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYG 394
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDS 786
ESE +R IF +A RP +IF DELD+L P R G V RVV+ +L +DG+
Sbjct: 395 ESESRLRQIFAEASLRRPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSE 452
Query: 787 SQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK-LLED 843
+ L ++GA+NRP +D AL RPGRFDK + +G+ + R +L+ L +K L
Sbjct: 453 GSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGI-PNAQDRLDILQKLLKKVPHSLTA 511
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
+ +A + GAD+ ALC +A +A +R L + A SV++ ++DF
Sbjct: 512 AEMMQLADSAH-GYVGADLAALCKEAGLYALRR-ALGKRAHPSDTEV--AGSVMIAFNDF 567
Query: 904 VKVLRELSPSLSMAEL 919
++ ++++ PS +M E+
Sbjct: 568 LQGMKDVRPS-AMREV 582
Score = 382 (139.5 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 117/377 (31%), Positives = 186/377 (49%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + + +A +G HV + +++ ++ + L Q F A P+I
Sbjct: 355 VLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSI 414
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D E N+ VAS++ +E S G
Sbjct: 415 IFIDELDAL--CPKREGAQNEVE--KRVVASLLTLMDGIGSEG----SEG---------- 456
Query: 520 CRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
Q++++ A + L +RR F EI +G Q R+++L +LL+ V S T
Sbjct: 457 ---QLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPH--SLTA 511
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKV--AHNDN 635
+E + + G++ DL AL +AG +R++ + + P ++++ V A ND
Sbjct: 512 AE--MMQLADSAHGYVGADLAALCKEAGLYALRRALGK--RAHPSDTEVAGSVMIAFNDF 567
Query: 636 -SSIAATQVMGKEDLVKAMERSKKRNASALGAPKL--------PLLHKDLF-SSGLRKRS 685
+ + ++ + + + L KL PL H D F G++
Sbjct: 568 LQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPK 627
Query: 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 745
GVLLYGPPG KT++AKA+A E LNFL+VKGPEL+N Y+GESE+ VR+IF+KAR P
Sbjct: 628 GVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPS 687
Query: 746 VIFFDELDSLAPARGAS 762
++FFDE+D+LA RG S
Sbjct: 688 ILFFDEIDALAVERGNS 704
Score = 43 (20.2 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 470 NLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEE 506
N+V + D V L ++ ++ E EP E D E
Sbjct: 160 NVVVMKVKGTDSVELHAQAGAISSEVCEPDLEKSDLE 196
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 151 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 210
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 211 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 270
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 271 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 327
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 328 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 385
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 386 FAIRARRKI 394
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 159 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 218
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 278
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 279 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 335
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 336 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 393
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 394 FAIRARRKI 402
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 113/325 (34%), Positives = 174/325 (53%)
Query: 611 KSNSEVDKNEPGESDLTAK----VAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGA 666
KS SE+ ++EP + D T V + I+ + +D+ +E K + +
Sbjct: 170 KSTSEISESEPKKFDSTGYDKDLVEALERDIISQNPNIRWDDIADLVEAKKLLKEAVV-- 227
Query: 667 PKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
LP+ + F R GVL+ GPPGTGKTLLAKAVATEC F +V L + Y G
Sbjct: 228 --LPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRG 285
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL--- 783
ESEK VR +F+ AR P IF DE+DS+ RG S + RV +++L ++DG+
Sbjct: 286 ESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGA 344
Query: 784 ---NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840
+D S+ + ++ A+N P ID AL R R +K +Y+ + S RE +L+ R+ +L
Sbjct: 345 TENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPS-AKGREELLRINLRELEL 401
Query: 841 LEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV--LXXXXXXXXXRIDQADSVVV 898
+DV L +IA+K ++GAD+ +C DA A +R++ L R + +
Sbjct: 402 ADDVDLANIAEKME-GYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDEMHMPTTM 460
Query: 899 EYDDFVKVLRELSPSLSMAELKKYE 923
E DF L+++S S+S A+++KYE
Sbjct: 461 E--DFEIALKKVSKSVSAADIEKYE 483
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 23 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 82
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 83 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 142
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 143 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 199
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 200 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 257
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 258 FAIRARRKI 266
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 161 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 220
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 280
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 281 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 337
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 338 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 395
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 396 FAIRARRKI 404
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 91/249 (36%), Positives = 145/249 (58%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
++ QV K D+ + K L + PLLH + F + G+ GVLL+GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR
Sbjct: 280 IGGARFDDGAGGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D+ R + K R + D+ +A+ CP N TGA++ ++C +A
Sbjct: 337 LDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGM 394
Query: 872 HA--AKRKV 878
A A+RK+
Sbjct: 395 FAIRARRKI 403
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 386 (140.9 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 92/258 (35%), Positives = 146/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D + + H D +I+ + V G D ++ + S + LPL++ +LF
Sbjct: 118 PREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIE----------LPLMNPELFLR 167
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G++ GVLLYGPPGTGKTLLA+A+A+ NFL V +I+ YIGES + +R++F
Sbjct: 168 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNY 227
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF-DNLGKVKMIMATN 286
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++DPALLRPGR D+ + + + ++ S R +LK ++ Y K F
Sbjct: 287 RPDVLDPALLRPGRLDRKIEIPLPNEQS-RMDILKIHAAGIAKHGEID-YEAIVKLAEGF 344
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 345 NGADLRNICTEAGMFAIR 362
Score = 382 (139.5 bits), Expect = 3.7e-36, Sum P(2) = 3.7e-36
Identities = 91/257 (35%), Positives = 146/257 (56%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL++ +LF G++ GVLLYGPPGTGKTLLA+A+A+ NFL V +I+ YIG
Sbjct: 156 ELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIG 215
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLND 785
ES + +R++F AR +PC+IF DE+D++ R + G S + R + ++L ++DG D
Sbjct: 216 ESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF-D 274
Query: 786 SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVS 845
+ + +I A+NRPD++DPALLRPGR D+ + + + ++ S R +LK ++
Sbjct: 275 NLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS-RMDILKIHAAGIAKHGEID 333
Query: 846 LYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVK 905
Y K F GAD+ +C +A A + + D V+ ++DF+K
Sbjct: 334 -YEAIVKLAEGFNGADLRNICTEAGMFAIRA---------------ERDYVI--HEDFMK 375
Query: 906 VLRELSPSLSMAELKKY 922
+R+LS + + Y
Sbjct: 376 AVRKLSEAKKLESSSHY 392
Score = 44 (20.5 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 23 IDSMVERRKPLVLS-STKLLINSVLSSSRRVTGENLVG 59
+D V RR V KLL + L S R ENL G
Sbjct: 4 VDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRG 41
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 420 (152.9 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 91/199 (45%), Positives = 130/199 (65%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G R GVLL GPPGTGKTLLA+AVA E + F S+ G + + M++G VRD+F+ A
Sbjct: 191 GARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA 250
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASN 797
+ PC+IF DE+D++ RGA G GG +R ++Q+L E+DG +++ + II A+N
Sbjct: 251 KKNAPCIIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFG-ANEGIIIIAATN 308
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++DPALLRPGRFD+ + V DV+ RE VLK R L E+++L +IA + P F
Sbjct: 309 RPDILDPALLRPGRFDRQITVD-RPDVNGREAVLKVHARNKPLDENINLRAIATRTP-GF 366
Query: 858 TGADMYALCADAWFHAAKR 876
+GAD+ L +A AA++
Sbjct: 367 SGADLENLLNEAALVAARQ 385
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 403 (146.9 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 118/352 (33%), Positives = 183/352 (51%)
Query: 594 PRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAM 653
P++LH D G + + E K ++ L A V + + T +DLV+A+
Sbjct: 141 PQNLHN---DRGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDGTGY--DKDLVEAL 195
Query: 654 ER---SKKRN------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGK 697
ER S+ N A + A KL P+ + F R GVL+ GPPGTGK
Sbjct: 196 ERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGK 255
Query: 698 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 757
TLLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+
Sbjct: 256 TLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICS 315
Query: 758 ARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGR 811
RG S + R+ +++L ++DG+ +D S+ + ++ A+N P ID AL R R
Sbjct: 316 RRGTS-EEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--R 372
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
+K +Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+ +C DA
Sbjct: 373 LEKRIYIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADITNVCRDASL 430
Query: 872 HAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
A +R++ +A + +DF L+++S S+S A++++YE
Sbjct: 431 MAMRRRIEGLTPEEIRNLSREAMHMPTTMEDFEMALKKISKSVSAADIERYE 482
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 403 (146.9 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 87/213 (40%), Positives = 133/213 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF S G+ + GV+LYGPPGTGKTLLA+AVA F+ V G EL+ YIG
Sbjct: 165 ELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIG 224
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ R G GG + R + ++L ++DG
Sbjct: 225 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR-VEGSGGGDSEVQRTMLELLNQLDGF- 282
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
++S+++ II A+NR D++DPALLRPGR D+ + S V+ R +L+ +RK L +
Sbjct: 283 ETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPS-VAARAEILRIHSRKMNLTRGI 341
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+L +A+K +GAD+ +C +A +A + +
Sbjct: 342 NLRKVAEKMN-GCSGADVKGVCTEAGMYALRER 373
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 386 (140.9 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 107/370 (28%), Positives = 187/370 (50%)
Query: 529 AADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ 588
A + +GL ++ H+ G L E + E L +L + + +D + + V I+G+
Sbjct: 2 AENREKGLQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQIVGE 59
Query: 589 TSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGES---DLTA--------------- 628
+ + + A G + ++DK++ PG D+T
Sbjct: 60 VLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 119
Query: 629 -KVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSG 686
++H D S++ +++ G + ++ + +LPL + +LF G+ G
Sbjct: 120 YNMSHEDPGSVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQRVGIIPPKG 169
Query: 687 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 746
LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F AR +PC+
Sbjct: 170 CLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCI 229
Query: 747 IFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 805
IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+NRPD +DPA
Sbjct: 230 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPA 288
Query: 806 LLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 865
LLRPGR D+ +++ + ++ + R +LK + D+ Y K F GAD+ +
Sbjct: 289 LLRPGRLDRKIHIELPNEQA-RLDILKIHSGPITKHGDID-YEAIVKLSDGFNGADLRNV 346
Query: 866 CADAWFHAAK 875
C +A A +
Sbjct: 347 CTEAGMFAIR 356
Score = 43 (20.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHEYVTQEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 378 (138.1 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 93/250 (37%), Positives = 142/250 (56%)
Query: 668 KLPLLH-KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL + + L + GL GVLL GPPG GKT L +AVA E L+V P L G
Sbjct: 217 RLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPG 276
Query: 727 ESEKNVRDIFQKAR---SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
E+E+NVR +FQ+AR S P ++F DE+D+L P RG+ RVV+Q+L +DG
Sbjct: 277 ETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAPES----RVVAQVLTLLDGA 332
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
+ +++ ++GA+NRPD +DPAL RPGRFD+ + +G + + R+ +L+ +T K +
Sbjct: 333 S-GDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPT-LKQRKEILQVITSKMPISSH 390
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDF 903
V L +A+ + GAD+ ALC +A HA +L D+ V++ DF
Sbjct: 391 VDLGLLAEMTV-GYVGADLTALCREAAMHA----LLHSEK--------NQDNPVIDEIDF 437
Query: 904 VKVLRELSPS 913
++ + + PS
Sbjct: 438 LEAFKNIQPS 447
Score = 364 (133.2 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 131/436 (30%), Positives = 205/436 (47%)
Query: 522 QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQ--PVSELTSDTG 577
++V++V A + + L P +RR F E+ +G T +QR E+L + P+S D G
Sbjct: 336 REVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHV-DLG 394
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
+ T G++ DL AL +A + + S D E D + SS
Sbjct: 395 L------LAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSS 448
Query: 638 IAATQVMGKEDL-------VKAMERSKKRNASALGAP-KLPLLHKDLFSSGLRKRSGVLL 689
+ V+G D+ + +E K + ++ P K P + GL + GVLL
Sbjct: 449 FRS--VIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPW---EFVRMGLTQPKGVLL 503
Query: 690 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 749
YGPPG KT L +A+AT C +F+SV G +L + ++G+SEK + IF++AR++ P ++F
Sbjct: 504 YGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFL 563
Query: 750 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL---------NDSSQDLFIIGASNRPD 800
DE+DS+ AR AS V +RV+S +L E+DG+ + SSQ F NR
Sbjct: 564 DEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQ-EVFNRSV 622
Query: 801 LIDPALLRPGRFDK-LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 859
+I A RP D LL G + Y + K +L S+ + K P
Sbjct: 623 MIIAATNRPDVLDTALLRPGRLDKIIY----IPPPDHKGRL----SILKVCTKTMPIGPD 674
Query: 860 ADMYALCADA-WFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 918
+ L A+ +F A + L + + D+ V+ + F+K L+ + PSLS +
Sbjct: 675 VSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLSCKD 734
Query: 919 LKKYELLRDQFEGSSN 934
L YE L + EG SN
Sbjct: 735 LALYENLFKK-EGFSN 749
Score = 110 (43.8 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 326 VVAVEPSEETVLRVNCTKTALVLGGSIPS-ALP-PDLLISGSNDFVPLQGDTVKILASIL 383
+V PS + V +T + LGG PS A P P++ + G ++ D+++ L +
Sbjct: 165 IVGGTPSPDPAGLVT-PRTRVSLGGEPPSEAQPQPEVPLGGLSE----AADSLRELLRL- 218
Query: 384 APTLCPSVLS-LKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERK 440
P P L+ L V VLL G PG GK +VR VAR G ++ S L S +
Sbjct: 219 -PLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGE 277
Query: 441 TSAALAQAFNTAQ---SYSPTILLLRDFD 466
T + + F A+ S P++L L + D
Sbjct: 278 TEENVRRVFQRARELASRGPSLLFLDEMD 306
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 401 (146.2 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 120/392 (30%), Positives = 196/392 (50%)
Query: 492 IREFTEPSAEDEDE-ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISM 550
I +F E S E D + H + + +K+ + L+ D + +++ F H +
Sbjct: 8 IAQFHEQSLEKYDGLDPHDLYVL--YKKLQMELELIQVQEDYIKEEQRNLKKEFIH--AQ 63
Query: 551 GPLTEQQRVEM-LSQLLQPVSE----LTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAG 605
+ + V + + Q L+ V E + S TGS +V+ ++ D L +
Sbjct: 64 EEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVR-VLSTI------DREQLKPSSS 116
Query: 606 ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALG 665
L ++SN VD P E+D T + D + +G D+ K R
Sbjct: 117 VGLHKQSNCLVDLVPP-EADSTISMLSPDEKPDISYSDIGGLDIQKQEIRE--------- 166
Query: 666 APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 724
A +LPL H L+ G+ GVLL+GPPG GKT+LAKAVA + +F+ V G E + Y
Sbjct: 167 AVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKY 226
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGL 783
+GE + VRD+F+ A+ P +IF DE+D++A R A + + R++ ++L ++DG
Sbjct: 227 LGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF 286
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
D + ++ +I A+NR D +DPALLRPGR D+ + + + D + V +T K + ED
Sbjct: 287 -DETTNIKVIMATNRADTLDPALLRPGRLDRKIELPL-PDRRQKRLVFTTITSKMNVGED 344
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
V L I + P + AD+ A+C +A HA +
Sbjct: 345 VDLEDIIAR-PDKISNADINAICQEAGMHAVR 375
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 401 (146.2 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 84/210 (40%), Positives = 132/210 (62%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+ HK+ F G+R GVLLYGPPGTGKTL+A+A A + + FL + GP+L+ M+IG+
Sbjct: 189 LPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 248
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDS 786
K VRD FQ A+ PC+IF DE+D++ R S SG + R + ++L ++DG + S
Sbjct: 249 GAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS-S 307
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+ + +I A+NR D++DPAL+R GR D+ + ++ + R R+L+ +RK + DV+
Sbjct: 308 DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA-RARILQIHSRKMNVHPDVNF 366
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+A+ +F GA + A+C +A A +R
Sbjct: 367 EELARSTD-DFNGAQLKAVCVEAGMLALRR 395
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 427 (155.4 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 94/252 (37%), Positives = 156/252 (61%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS-----LNFLSVKGPELIN 722
LPLL+ +L+ + + GVL +GPPGTGKTL+A+A+A CS + F KG + ++
Sbjct: 418 LPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALAASCSTSERKITFFMRKGADCLS 477
Query: 723 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG 782
++GE+E+ +R +F++A++ +P +IFFDE+D LAP R + + + +VS +LA +DG
Sbjct: 478 KWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRSSKQEQ--IHASIVSTLLALMDG 535
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL-L 841
+++ Q + +IGA+NRPD IDPAL RPGRFD+ Y + D+ R+ +LK TRK+ L
Sbjct: 536 MDNRGQ-VIVIGATNRPDAIDPALRRPGRFDREFYFPL-PDLGSRKEILKIHTRKWNPEL 593
Query: 842 EDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYD 901
D+ L +A+ + GAD+ ALC +A ++ +RK +++ + V+
Sbjct: 594 PDLFLERLAQ-LTKGYGGADLRALCTEAALNSIQRKYPQIYGTNEKLKVNPSKVKVIA-K 651
Query: 902 DFVKVLRELSPS 913
DF+K + ++ PS
Sbjct: 652 DFMKAIEKIVPS 663
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 399 (145.5 bits), Expect = 4.3e-36, P = 4.3e-36
Identities = 89/233 (38%), Positives = 138/233 (59%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D++ +++ K + +LP+ H +LF S G+ + GVLLYGPPGTGKTLLA+AVA
Sbjct: 161 DMIGGLDQQIKEIKEVI---ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ AR SG
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 767 G--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 824
G + R + ++L ++DG ++S + ++ A+NR D++D ALLRPGR D+ + N +
Sbjct: 278 GDSEVQRTMLELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNE 335
Query: 825 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
R +LK +RK L+ + L IA+K +GA++ A+C +A A + +
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFALRER 387
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 399 (145.5 bits), Expect = 4.3e-36, P = 4.3e-36
Identities = 89/233 (38%), Positives = 138/233 (59%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D++ +++ K + +LP+ H +LF S G+ + GVLLYGPPGTGKTLLA+AVA
Sbjct: 161 DMIGGLDQQIKEIKEVI---ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ AR SG
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 767 G--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 824
G + R + ++L ++DG ++S + ++ A+NR D++D ALLRPGR D+ + N +
Sbjct: 278 GDSEVQRTMLELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP-NPNE 335
Query: 825 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
R +LK +RK L+ + L IA+K +GA++ A+C +A A + +
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFALRER 387
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 384 (140.2 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPL H +L+ G++ GV+LYG PGTGKTLLAKAVA + S FL + G ELI Y+G
Sbjct: 199 ELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLG 258
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMD--RVVSQMLAEIDGLN 784
+ + R IF+ A P ++F DE+D++ R S +SGG + R + ++L ++DG +
Sbjct: 259 DGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFD 317
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
D D+ +I A+N+ + +DPAL+RPGR D K+L+ N D+S ++++L T K L ED
Sbjct: 318 DRG-DVKVIMATNKIETLDPALIRPGRIDRKILFE--NPDLSTKKKILGIHTSKMNLSED 374
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
V+L ++ + +GAD+ A+C +A A + +
Sbjct: 375 VNLETLVTT-KDDLSGADIQAMCTEAGLLALRER 407
Score = 41 (19.5 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLD 172
T +++ D D H+ +SPTM + L D ELL+
Sbjct: 108 TLEEIIDDD-HAIVTSPTMPDYYVSILSFVDKELLE 142
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 415 (151.1 bits), Expect = 5.2e-36, P = 5.2e-36
Identities = 89/200 (44%), Positives = 129/200 (64%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G + GVLL GPPGTGKTLLAKA+A E + F S+ G E + M++G VRD+F+KA
Sbjct: 201 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 260
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASN 797
+ PC+IF DE+D++ RGA G GG +R ++Q+L E+DG + + + II A+N
Sbjct: 261 KENAPCLIFIDEIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGF-EGNTGIIIIAATN 318
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++D AL+RPGRFD+ + V D S R+ +L+ R KL +VS+ SIA++ P F
Sbjct: 319 RPDVLDSALMRPGRFDRQVMVDA-PDYSGRKEILEVHARNKKLAPEVSIDSIARRTP-GF 376
Query: 858 TGADMYALCADAWFHAAKRK 877
+GAD+ L +A A+R+
Sbjct: 377 SGADLANLLNEAAILTARRR 396
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 398 (145.2 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 87/213 (40%), Positives = 131/213 (61%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H ++F S G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ YIG
Sbjct: 196 ELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 255
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPAR--GASGDSGGVMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ R G GDS + R + ++L ++DG
Sbjct: 256 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE--VQRTMMELLNQLDGF- 312
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+S+Q++ +I +NR D++D ALLRPGR D+ + N +V R +LK +RK L+ +
Sbjct: 313 ESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP-NPNVEARMEILKIHSRKMNLMRGI 371
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+ IA N +GA++ A+C +A A + +
Sbjct: 372 DMLKIATDMN-NCSGAEVKAVCTEAGMFALRER 403
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 398 (145.2 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 108/292 (36%), Positives = 159/292 (54%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 707
D + +E +KK A+ LP+ D F R GVL+ GPPGTGKT+LAKAVATE
Sbjct: 207 DDIADLEEAKKLLREAV---VLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATE 263
Query: 708 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 767
C F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S D
Sbjct: 264 CGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPATIFIDEIDSICSRRGTS-DEHE 322
Query: 768 VMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 323 ASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 380
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
+ R +LK R+ +L D+SL IA+K ++GAD+ +C DA A +R++
Sbjct: 381 T-AKGRAELLKINLREVELDPDISLEEIAEKIE-GYSGADITNVCRDASLMAMRRRINGL 438
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+ + V DF L+++S S+S A+L+KYE +F GS+
Sbjct: 439 TPEEIRALSKEELQMPVTKGDFELALKKISKSVSAADLEKYEKWMAEF-GSA 489
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 398 (145.2 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 117/348 (33%), Positives = 180/348 (51%)
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMER-- 655
H L D G + + E +K ++ A V + S +T +DLV+A+ER
Sbjct: 142 HNLHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETSKFDSTGY--DKDLVEALERDI 199
Query: 656 -SKKRN------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLA 701
S+ N A + A KL P+ + F R GVL+ GPPGTGKTLLA
Sbjct: 200 ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLA 259
Query: 702 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA 761
KAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG
Sbjct: 260 KAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGT 319
Query: 762 SGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K
Sbjct: 320 S-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+ +C DA A +
Sbjct: 377 IYIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADITNVCRDASLMAMR 434
Query: 876 RKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
R++ + + +DF L+++S S+S A++++YE
Sbjct: 435 RRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 398 (145.2 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 87/213 (40%), Positives = 131/213 (61%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H ++F S G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ YIG
Sbjct: 196 ELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 255
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPAR--GASGDSGGVMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ R G GDS + R + ++L ++DG
Sbjct: 256 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE--VQRTMMELLNQLDGF- 312
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV 844
+S+Q++ +I +NR D++D ALLRPGR D+ + N +V R +LK +RK L+ +
Sbjct: 313 ESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP-NPNVEARMEILKIHSRKMNLMRGI 371
Query: 845 SLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+ IA N +GA++ A+C +A A + +
Sbjct: 372 DMLKIATDMN-NCSGAEVKAVCTEAGMFALRER 403
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 398 (145.2 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 116/347 (33%), Positives = 181/347 (52%)
Query: 599 ALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMER--- 655
+L +D G + + E K ++ L A V + + +T +DLV+A+ER
Sbjct: 143 SLHSDRGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDSTGY--DKDLVEALERDII 200
Query: 656 SKKRN------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAK 702
S+ N A + A KL P+ + F R GVL+ GPPGTGKTLLAK
Sbjct: 201 SQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAK 260
Query: 703 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 762
AVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 763 GDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLL 816
+ RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +
Sbjct: 321 -EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRI 377
Query: 817 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+ +C DA A +R
Sbjct: 378 YIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADITNVCRDASLMAMRR 435
Query: 877 KVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
++ + + +DF L+++S S+S A++++YE
Sbjct: 436 RIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 383 (139.9 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 113/379 (29%), Positives = 191/379 (50%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSD 575
I I ++ LL+ A + L ++ H+ G L E + E L +L + + +D
Sbjct: 3 IPDIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSEND 60
Query: 576 TGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHN 633
+ + V I+G+ + + + A G + ++DK++ PG +VA
Sbjct: 61 LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL- 114
Query: 634 DNSSIAATQVMGKE--DLVKAMERSKKRNAS--ALGAP-----------KLPLLHKDLFS 678
D +++ + + +E LV M N S +G +LPL + +LF
Sbjct: 115 DMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 174
Query: 679 S-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 737
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 175 RVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFN 234
Query: 738 KARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGAS 796
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+
Sbjct: 235 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMAT 293
Query: 797 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 856
NRPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K
Sbjct: 294 NRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDG 351
Query: 857 FTGADMYALCADAWFHAAK 875
F GAD+ +C +A A +
Sbjct: 352 FNGADLRNVCTEAGMFAIR 370
Score = 41 (19.5 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 370 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 401
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 413 (150.4 bits), Expect = 6.7e-36, P = 6.7e-36
Identities = 99/241 (41%), Positives = 144/241 (59%)
Query: 641 TQVMGK---EDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGK 697
T+ G+ ED V ++ +K+ + K P K G R GVLL GPPGTGK
Sbjct: 144 TEAQGRVTFED-VAGVDEAKEELEEIIQFLKDP---KKFTKLGGRIPKGVLLVGPPGTGK 199
Query: 698 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 757
TLLA+AVA E + F S+ G + + M++G VRD+F + + PC+IF DE+D++
Sbjct: 200 TLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGR 259
Query: 758 ARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
RGA G GG +R ++Q+L E+DG +S++ + +I A+NRPD++DPALLRPGRFD+
Sbjct: 260 HRGA-GLGGGHDEREQTLNQLLVEMDGF-ESNEGVILIAATNRPDVLDPALLRPGRFDRQ 317
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+ V DV RE +LK T+K L DV L IA+ P F+GAD+ + +A AA+
Sbjct: 318 VVVP-QPDVKGREMILKVHTKKTPLASDVDLGVIARGTP-GFSGADLSNVVNEAALLAAR 375
Query: 876 R 876
+
Sbjct: 376 K 376
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 397 (144.8 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 84/210 (40%), Positives = 133/210 (63%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+LHK+ F G++ GVL++GPPGTGKTLLA+A A++ + FL + GP+L+ M+IG+
Sbjct: 204 LPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGD 263
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDS 786
K VRD F A+ P +IF DELD++ R S SG + R + ++L ++DG + +
Sbjct: 264 GAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS-T 322
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+ +I A+NRPD +DPALLR GR D+ + + ++ S R R+L+ +RK + +DV+
Sbjct: 323 DDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES-RARILQIHSRKMNVHKDVNF 381
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+A+ +F GA + A+C +A A +R
Sbjct: 382 EELARSTD-DFNGAQLKAVCVEAGMIALRR 410
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 397 (144.8 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 84/210 (40%), Positives = 133/210 (63%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+LHK+ F G++ GVL++GPPGTGKTLLA+A A++ + FL + GP+L+ M+IG+
Sbjct: 204 LPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGD 263
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDS 786
K VRD F A+ P +IF DELD++ R S SG + R + ++L ++DG + +
Sbjct: 264 GAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS-T 322
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+ +I A+NRPD +DPALLR GR D+ + + ++ S R R+L+ +RK + +DV+
Sbjct: 323 DDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES-RARILQIHSRKMNVHKDVNF 381
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+A+ +F GA + A+C +A A +R
Sbjct: 382 EELARSTD-DFNGAQLKAVCVEAGMIALRR 410
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 397 (144.8 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 90/258 (34%), Positives = 149/258 (57%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L K++H D +I+ + V G + ++ + +LPL++ +LF
Sbjct: 129 PREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELRE----------VVELPLINPELFKR 178
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LL+GPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC++F DE+D++ R + G S + R + ++L ++DG DS + +I A+N
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF-DSLGKVKVIMATN 297
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ + +G+ ++ S R +LK + K ++ ++ K F
Sbjct: 298 RPDTLDPALLRPGRLDRKIEIGLPNEQS-RLEILKIHSNKITKHGEIDFEAVVK-LSDGF 355
Query: 858 TGADMYALCADAWFHAAK 875
+ AD+ +C +A A +
Sbjct: 356 SAADLRNVCTEAGMFAIR 373
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 397 (144.8 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 90/258 (34%), Positives = 149/258 (57%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L K++H D +I+ + V G + ++ + +LPL++ +LF
Sbjct: 129 PREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELRE----------VVELPLINPELFKR 178
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LL+GPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC++F DE+D++ R + G S + R + ++L ++DG DS + +I A+N
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF-DSLGKVKVIMATN 297
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ + +G+ ++ S R +LK + K ++ ++ K F
Sbjct: 298 RPDTLDPALLRPGRLDRKIEIGLPNEQS-RLEILKIHSNKITKHGEIDFEAVVK-LSDGF 355
Query: 858 TGADMYALCADAWFHAAK 875
+ AD+ +C +A A +
Sbjct: 356 SAADLRNVCTEAGMFAIR 373
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 386 (140.9 bits), Expect = 7.4e-36, Sum P(2) = 7.4e-36
Identities = 88/232 (37%), Positives = 138/232 (59%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 706
D++ +++ K + +L L H +LF S G+ + GVLLYGPPGTGKTLLA+AVA
Sbjct: 132 DMIGGLDQQIKEIKEVI---ELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 188
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ +R S SG
Sbjct: 189 HTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSG 248
Query: 767 -GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 825
+ R + ++L ++DG + ++++ II A+NR D++DPALLRPGR D+ + S V
Sbjct: 249 DSEVQRTMLELLNQLDGF-EPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPS-VE 306
Query: 826 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
R +L+ +R L ++L IA+K +GA++ +C +A +A + +
Sbjct: 307 ARADILRIHSRSMNLTRGINLTKIAEKMN-GCSGAELKGVCTEAGMYALRER 357
Score = 37 (18.1 bits), Expect = 7.4e-36, Sum P(2) = 7.4e-36
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 190 ISSLKFLVHQGKEVLESLFIAKVDDGTSGQ--DGKASLIKLGLQSVGQLPKYASHLRVSF 247
I S+K + QG+ VL L + D + + + L++ VG++ K S +V
Sbjct: 11 IESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMSTKKV-L 69
Query: 248 VKI-PE 252
VK+ PE
Sbjct: 70 VKVHPE 75
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 383 (139.9 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 89/258 (34%), Positives = 146/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D + + H D +++ + V G D ++ + S + LPL++ +LF
Sbjct: 119 PREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIE----------LPLMNPELFLR 168
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G++ GVLLYGPPGTGKTLLA+A+A+ NFL + +I+ YIGES + +R++F
Sbjct: 169 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGY 228
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG ++ + I+ A+N
Sbjct: 229 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIM-ATN 287
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD++DPALLRPGR D+ + + + ++ + R VLK ++ Y K F
Sbjct: 288 RPDVLDPALLRPGRLDRKIEIPLPNEQA-RMEVLKIHAAGIAKHGEID-YEAVVKLAEGF 345
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 346 NGADLRNVCTEAGMAAIR 363
Score = 40 (19.1 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKY 922
+A+ V ++DF+K +R+L+ + + Y
Sbjct: 363 RAERDYVVHEDFMKAVRKLNDAKKLESSAHY 393
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 382 (139.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 111/370 (30%), Positives = 187/370 (50%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
LL+ A + L ++ H+ G L E + E L +L + + +D + + V
Sbjct: 4 LLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQ 61
Query: 585 IIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHNDNSSIAATQ 642
I+G+ + + + A G + ++DK++ PG +VA D +++ +
Sbjct: 62 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL-DMTTLTIMR 115
Query: 643 VMGKE--DLVKAMERSKKRNAS--ALGAP-----------KLPLLHKDLFSS-GLRKRSG 686
+ +E LV M N S +G +LPL + +LF G+ G
Sbjct: 116 YLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKG 175
Query: 687 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 746
LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F AR +PC+
Sbjct: 176 CLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCI 235
Query: 747 IFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 805
IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+NRPD +DPA
Sbjct: 236 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPA 294
Query: 806 LLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 865
LLRPGR D+ +++ + ++ + R +LK ++ Y K F GAD+ +
Sbjct: 295 LLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGFNGADLRNV 352
Query: 866 CADAWFHAAK 875
C +A A +
Sbjct: 353 CTEAGMFAIR 362
Score = 41 (19.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 362 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 393
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 382 (139.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 111/370 (30%), Positives = 187/370 (50%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
LL+ A + L ++ H+ G L E + E L +L + + +D + + V
Sbjct: 12 LLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQ 69
Query: 585 IIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHNDNSSIAATQ 642
I+G+ + + + A G + ++DK++ PG +VA D +++ +
Sbjct: 70 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL-DMTTLTIMR 123
Query: 643 VMGKE--DLVKAMERSKKRNAS--ALGAP-----------KLPLLHKDLFSS-GLRKRSG 686
+ +E LV M N S +G +LPL + +LF G+ G
Sbjct: 124 YLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKG 183
Query: 687 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 746
LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F AR +PC+
Sbjct: 184 CLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCI 243
Query: 747 IFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 805
IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+NRPD +DPA
Sbjct: 244 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPA 302
Query: 806 LLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 865
LLRPGR D+ +++ + ++ + R +LK ++ Y K F GAD+ +
Sbjct: 303 LLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGFNGADLRNV 360
Query: 866 CADAWFHAAK 875
C +A A +
Sbjct: 361 CTEAGMFAIR 370
Score = 41 (19.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 370 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 401
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 422 (153.6 bits), Expect = 8.9e-36, P = 8.9e-36
Identities = 121/388 (31%), Positives = 203/388 (52%)
Query: 539 TIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ-TSGFMPR-D 596
T R +S ++ P+ E + SQ+ Q S T SE + ++ Q S FMP D
Sbjct: 151 TSRINYSVPLAFPPVDEMDG-DPSSQVNQSRSRKTH---SELAITKLLRQQVSSFMPYID 206
Query: 597 LHALVADAGANLIRKSNSEVDK--NEPGESDLTAKVAH-NDNSSIAATQVMGKEDLVKAM 653
+++ I+KS+++ K +P S + S +A + +G + +
Sbjct: 207 SSGSESESDNTRIKKSSAKTIKALTDPANSGGPPDFGRIREKSDLADSDPLGVDSSLSFE 266
Query: 654 ERSKKRN-ASALGAP-KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS- 709
N + L LPLL+ ++F ++ GVL +GPPGTGKTL+A+A+A CS
Sbjct: 267 SVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSS 326
Query: 710 ----LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 765
++F KG + ++ ++GE+E+ +R +F++A+S +P +IFFDE+D LAP R + +
Sbjct: 327 ENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQ 386
Query: 766 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 825
+ +VS +LA +DG+ Q + IIGA+NRPD +DPAL RPGRFD+ Y + D
Sbjct: 387 --IHASIVSTLLALMDGMESRGQ-VIIIGATNRPDAVDPALRRPGRFDREFYFPL-PDRD 442
Query: 826 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXX 885
R+++++ TR + L S+ + + GAD+ ALC +A ++ KR
Sbjct: 443 ARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRST 502
Query: 886 XXXRIDQADSVVVEYDDFVKVLRELSPS 913
+ID ++ V+ DFV ++ + PS
Sbjct: 503 KRLQIDPK-TIKVKVKDFVMSMKRMIPS 529
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 396 (144.5 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 85/219 (38%), Positives = 136/219 (62%)
Query: 660 NASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 718
+AS + A LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP
Sbjct: 212 SASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGP 271
Query: 719 ELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQML 777
+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L
Sbjct: 272 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 331
Query: 778 AEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837
++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 332 NQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRK 389
Query: 838 FKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 390 MNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 427
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 396 (144.5 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 101/305 (33%), Positives = 166/305 (54%)
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
S TGS +V+ I+ + R+L L A L R SN+ VD P + ++ +
Sbjct: 95 STTGSNYYVR-ILSTIN----REL--LKPSASVALHRHSNALVDVLPPEADSSISLLSQS 147
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGP 692
+ ++ + G + +++ + R A +LPL H +L+ G+ GVLLYGP
Sbjct: 148 EKPDVSYNDIGGCD-----IQKQEIREAV-----ELPLTHHELYKQIGIDPPRGVLLYGP 197
Query: 693 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 752
PGTGKT+LAKAVA + F+ V G E + Y+GE + VRD+F+ A+ P +IF DE+
Sbjct: 198 PGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEV 257
Query: 753 DSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
D++A AR A + + R++ ++L ++DG D + ++ +I A+NR D +DPALLRPGR
Sbjct: 258 DAIATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGR 316
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + + D + V + T K L ++V L + P + A++ A+C +A
Sbjct: 317 LDRKIEFPL-PDRRQKRLVFQVCTSKMNLSDEVDLEDYVSR-PDKISAAEIAAICQEAGM 374
Query: 872 HAAKR 876
HA ++
Sbjct: 375 HAVRK 379
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 396 (144.5 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 86/222 (38%), Positives = 134/222 (60%)
Query: 658 KRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716
K+ + A LP+ HKD F + G+ GVL+YGPPGTGKT++A+AVA + FL +
Sbjct: 184 KQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLA 243
Query: 717 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQ 775
GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + +
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVG-VNSDVSYRERVLKAL 834
+L ++DG + D+ +I A+NR D++DPALLR GR D+ + + N D R R+++
Sbjct: 304 LLNQLDGFQPND-DIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA--RARIMQIH 360
Query: 835 TRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+RK + +DV+ +A+ C +F GA A+C +A A +R
Sbjct: 361 SRKMNVNKDVNFEELAR-CTDDFNGAQCKAVCVEAGMIALRR 401
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 396 (144.5 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 86/215 (40%), Positives = 139/215 (64%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA--TECSLNFLSVKGPELINMY 724
+LP+ H +LF + G+ + GVLL+GPPGTGKTLLA+AVA TEC+ F+ V G EL+ +
Sbjct: 176 ELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECT--FIRVSGSELVQKF 233
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDG 782
IGE + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 234 IGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-VEGSSGGDSEVQRTMLELLNQLDG 292
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
++++++ +I A+NR D++DPALLRPGR D+ + D R +LK +RK L+
Sbjct: 293 F-EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPA-PDEKARADILKIHSRKMNLMR 350
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
+++ IA++ P +GA++ ++C +A A + +
Sbjct: 351 GINMAKIAEQIP-GASGAEVKSVCTEAGMFALRER 384
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 396 (144.5 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 86/222 (38%), Positives = 134/222 (60%)
Query: 658 KRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716
K+ + A LP+ HKD F + G+ GVL+YGPPGTGKT++A+AVA + FL +
Sbjct: 184 KQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLA 243
Query: 717 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQ 775
GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + +
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 776 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVG-VNSDVSYRERVLKAL 834
+L ++DG + D+ +I A+NR D++DPALLR GR D+ + + N D R R+++
Sbjct: 304 LLNQLDGFQPND-DIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA--RARIMQIH 360
Query: 835 TRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+RK + +DV+ +A+ C +F GA A+C +A A +R
Sbjct: 361 SRKMNVNKDVNFEELAR-CTDDFNGAQCKAVCVEAGMIALRR 401
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 172 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 231
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 232 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 289
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 290 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 347
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 348 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 380
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 104 DVDKNIDINDVTPNCRVALRND 125
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 174 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 233
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 234 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 291
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 292 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 349
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 350 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 382
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 106 DVDKNIDINDVTPNCRVALRND 127
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 384 (140.2 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 166 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 225
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 226 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 283
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 284 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 341
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 342 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 374
Score = 38 (18.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 424 (154.3 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 109/314 (34%), Positives = 179/314 (57%)
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHND---- 634
E+F+ ++ T GF+ +DL L +L+ S+ E ++ E E++ K++
Sbjct: 407 EQFIVELSKITPGFLFKDLTKLCRTV--SLLTVSSFEEEEEEENENEKEIKISFKIFKEA 464
Query: 635 ----------NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRK 683
N + V K D + ++ K+R + + PL ++D F L
Sbjct: 465 LKFIKPSTLINFDVTVQNV--KWDRIGGYKQVKERFRQLI---EWPLKYQDTFKRLSLNN 519
Query: 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 743
SG+LL+GP G GK+L+ KA+ATE S+NF+S+KG ++ + ++GESE+ +RD+F+ AR +
Sbjct: 520 SSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSARLSS 579
Query: 744 PCVIFFDELDSLAPARGASGDS--GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 801
PC++FFDE+DSL +RG+ D+ GG R++SQ+L E+DG+ SQ +F+IG +N
Sbjct: 580 PCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKSQ-IFLIGCTNSIQS 638
Query: 802 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT------RKFKLLEDVSLYSIAKKCPP 855
ID ALLRPGRF+ L+++ + S + R +L L+ K ++ + V L IA +
Sbjct: 639 IDSALLRPGRFESLIHIDLPS-LDDRLDILNVLSTNSLNFNKDEITQQVWL-DIATQTS- 695
Query: 856 NFTGADMYALCADA 869
FTG+ +Y LC A
Sbjct: 696 GFTGSQLYDLCNQA 709
Score = 38 (18.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+L+ G G K ++ Y+A++ Y NL + + N+ + P I
Sbjct: 248 ILIDGPEGTSKLQLIEYIAQQYN-----YKYLNLNELVNGGSGGGGGEQLNSKE---PMI 299
Query: 460 LLLRDFDVFRNLVS-NES 476
+L + D +S NE+
Sbjct: 300 YILNNLDSIVGKISDNEN 317
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 384 (140.2 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 85/214 (39%), Positives = 134/214 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA F+ V G EL+ +IG
Sbjct: 174 ELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 233
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLN 784
E + VR++F AR P +IF DE+DS+ +R G SGG + R + ++L ++DG
Sbjct: 234 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGF- 291
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 292 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 349
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA+ P +GA++ +C +A +A + +
Sbjct: 350 INLRKIAELMP-GASGAEVKGVCTEAGMYALRER 382
Score = 37 (18.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
D+ +N+ N+ PN +V L ++
Sbjct: 106 DIDKNIDINDVTPNCRVALRND 127
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 394 (143.8 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 108/302 (35%), Positives = 163/302 (53%)
Query: 596 DLHALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKA 652
D HA+V+ A G S VDK+ EPG S L H+ S+ + LV
Sbjct: 137 DDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILL----HHKTVSVVGVLTEESDPLVSV 192
Query: 653 MERSKKRNASA--LG-----------APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKT 698
M+ K S +G + +LPLLH +L+ G++ GV+LYG PGTGKT
Sbjct: 193 MKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKT 252
Query: 699 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 758
LLAKAVA + S FL + G ELI Y+G+ + VR IFQ A P ++F DE+D++
Sbjct: 253 LLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTK 312
Query: 759 RGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD-KL 815
R S SGG + R + ++L ++DG +D D+ +I A+N+ + +DPAL+RPGR D K+
Sbjct: 313 RYDS-TSGGEREIQRTMLELLNQLDGFDDRG-DVKVIMATNKIETLDPALIRPGRIDRKI 370
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
L+ N D + ++++ T K L +DV L + + +GAD+ A+C +A A +
Sbjct: 371 LFE--NPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQ-KDDLSGADIRAICTEAGLMALR 427
Query: 876 RK 877
+
Sbjct: 428 ER 429
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 394 (143.8 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/217 (38%), Positives = 136/217 (62%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
+LPLL + F G+ G+LLYGPPGTGKTL A+AVA F+ V G EL+ Y+G
Sbjct: 203 ELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 262
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GASGDSGGVMDRVVSQMLAEIDGL 783
E + VR++F+ AR+ + C+IFFDE+D++ AR GA GD+ + R + +++ ++DG
Sbjct: 263 EGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNE--VQRTMLELITQLDGF 320
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
D ++ ++ A+NRP+ +DPALLRPGR D+ + + D+ R + + ++ + +D
Sbjct: 321 -DPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL-PDLEGRANIFRIHSKTMSVEKD 378
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 878
+ I++ CP N TGA++ ++C +A A A+RKV
Sbjct: 379 IRWELISRLCP-NATGAELRSVCTEAGMFAIRARRKV 414
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 394 (143.8 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 88/233 (37%), Positives = 140/233 (60%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 706
++V +E+ K + +LP+ H +LF S G+ + G+LLYGPPGTGKTLLA+AVA
Sbjct: 145 EMVGGLEKQIKEIKEVI---ELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAH 201
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG-ASGDS 765
F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ +R +SG S
Sbjct: 202 HTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGS 261
Query: 766 G-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 824
G + R + ++L ++DG ++++++ +I A+NR D++DPALLRPGR D+ + S
Sbjct: 262 GDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPS-A 319
Query: 825 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
R +L+ +R L + L SIA+K +GA++ +C +A A + +
Sbjct: 320 EARAEILRIHSRSMNLTRGIDLKSIAEKMN-GASGAELKGVCTEAGMFALRER 371
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 394 (143.8 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 112/347 (32%), Positives = 182/347 (52%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSE-EFVKDI---IGQTSGFMPRDLHALVADAGANL 608
L E++ V+ + L+P E T + + + ++ +G + D HA+V+ AG
Sbjct: 80 LMEEEYVQN-QERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDD-HAIVSTAGPEY 137
Query: 609 IRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASA--L 664
S VDK+ EPG S L H+ SI + + ++ M+ K S +
Sbjct: 138 YVSIMSFVDKDMLEPGCSVLL----HHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADI 193
Query: 665 G-----------APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 712
G A +LPL H +L+ G++ GV+LYG PGTGKTLLAKAVA + S F
Sbjct: 194 GGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF 253
Query: 713 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDR 771
L V G ELI Y+G+ + VR +F A P ++F DE+D++ R A + + R
Sbjct: 254 LRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQR 313
Query: 772 VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERV 830
+ ++L ++DG + S +D+ +I A+NR +DPAL+RPGR D K+L+ N D + + ++
Sbjct: 314 TMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFE--NPDEATKRKI 371
Query: 831 LKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
T K L EDV+L + + C + +GA++ A+ ++A A + +
Sbjct: 372 FTIHTSKMNLGEDVNLEELIQ-CKDDLSGAEIKAIVSEAGLLALRER 417
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 374 (136.7 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 85/200 (42%), Positives = 123/200 (61%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
GL G+LL GPPG GKTLL + VA + ++V GPE+ GESE+N+R +F++A
Sbjct: 217 GLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQA 276
Query: 740 RSAR---PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGAS 796
R A PCV+ DE+DSL P R +G S +R+V+Q+L +D + S + IIGA+
Sbjct: 277 RDAADDGPCVLLIDEIDSLCPRR--TGSSSAPENRLVAQLLTLMDAIG-SHEGFVIIGAT 333
Query: 797 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK-CPP 855
N+PD +DPAL RPGRFD+ + +GV S + R +LK + R+ L DV L ++A+ C
Sbjct: 334 NQPDSLDPALRRPGRFDREVIIGVPS-LLQRRSILKCVCREMPLSPDVDLNTLAEMTC-- 390
Query: 856 NFTGADMYALCADAWFHAAK 875
+ GAD+ AL +A A +
Sbjct: 391 GYVGADLSALSREAALQAMR 410
Score = 277 (102.6 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 81/270 (30%), Positives = 137/270 (50%)
Query: 525 LLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFV 582
+++ A + + L P +RR F E+ +G + QR +L + + + L+ D +
Sbjct: 328 VIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMP-LSPDVD----L 382
Query: 583 KDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEP-GESDLTAKVAHND----NSS 637
+ T G++ DL AL +A +R +S++ +EP + H SS
Sbjct: 383 NTLAEMTCGYVGADLSALSREAALQAMR--HSQMGASEPVSMQHFMQALRHVQPSCLRSS 440
Query: 638 IAATQV--MGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
I AT +G E + +E K + ++ + P+ + F G+ + GVLLYGPPG
Sbjct: 441 IGATDFKPIGWEQ-IGGLEDVKLKLKQSI---EWPMRFPEAFVRLGVSRPRGVLLYGPPG 496
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
KT L KA A+ +F S+ G EL + Y+G+SEK + +F +AR+ P ++F DE+DS
Sbjct: 497 CAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDS 556
Query: 755 LAPAR-GASGDSGGVMDRVVSQMLAEIDGL 783
+ +R S S V +V+S +L E+DG+
Sbjct: 557 MVGSREDGSSSSHSVQSQVLSVLLTELDGV 586
Score = 165 (63.1 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 48/135 (35%), Positives = 74/135 (54%)
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
++D+ I+ A+NRP+ +D ALLRPGR D+++YV D+ R VL+ T+ L +DV L
Sbjct: 623 NKDVLIVAATNRPEALDSALLRPGRLDQIIYVPP-PDLQARLAVLRICTKSVPLHQDVCL 681
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKV 906
+A + F+GAD+ LC +A A + L V +Y F+K
Sbjct: 682 EDLAAQTEL-FSGADLENLCKEAALLALREDGLA------------VSCVRQKY--FLKA 726
Query: 907 LRELSPSLSMAELKK 921
L+ LSPSLS +L++
Sbjct: 727 LQMLSPSLSAEQLQQ 741
Score = 123 (48.4 bits), Expect = 0.00089, P = 0.00089
Identities = 75/293 (25%), Positives = 116/293 (39%)
Query: 353 PSALPPDLLISGSNDFVPLQGDTV--------KILASILAPTLCPSV---LSLKFRVAVL 401
PS L + G+ DF P+ + + K+ SI P P L + VL
Sbjct: 434 PSCLRSSI---GATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVL 490
Query: 402 LHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILL 461
L+G PGC K T+V+ A S L + + LAQ F A++ +P+I+
Sbjct: 491 LYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVF 550
Query: 462 LRDFDVFRNLVSNESLPNDQVGLSSEVASV---------IREFTEPSA-------EDEDE 505
L + D + S E + + S+V SV +R S E D+
Sbjct: 551 LDEVDSM--VGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQ 608
Query: 506 ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLS 563
E + E++++C + VL+VAA + E L + R I + P Q R+ +L
Sbjct: 609 EDVRLHQM-ELQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLR 667
Query: 564 QLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV 616
+ V L D E D+ QT F DL L +A +R+ V
Sbjct: 668 ICTKSVP-LHQDVCLE----DLAAQTELFSGADLENLCKEAALLALREDGLAV 715
Score = 75 (31.5 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNT 451
L L +LL G PG GK +VR VA+ +G +V + + S ++ L + F
Sbjct: 216 LGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQ 275
Query: 452 AQSYS---PTILLLRDFD 466
A+ + P +LL+ + D
Sbjct: 276 ARDAADDGPCVLLIDEID 293
Score = 51 (23.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 597 LHALVADAGANLIRKSNSEVDKNEPGESD 625
+ + D GA L+ + EV + PGES+
Sbjct: 238 VRCVAKDIGATLVTVNGPEVTGSRPGESE 266
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 379 (138.5 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 106/374 (28%), Positives = 186/374 (49%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
LL+ A + L ++ H+ G L E + E L +L + + +D + + V
Sbjct: 12 LLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQ 69
Query: 585 IIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGES---DLTA----------- 628
I+G+ + + + A G + ++DK++ PG D+T
Sbjct: 70 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREV 129
Query: 629 -----KVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLR 682
++H D ++ +++ G + ++ + +LPL + +LF G+
Sbjct: 130 DPLVYNMSHEDPGDVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQRVGII 179
Query: 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 742
G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F AR
Sbjct: 180 PPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDH 239
Query: 743 RPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 801
+PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+NRPD
Sbjct: 240 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDT 298
Query: 802 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 861
+DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F GAD
Sbjct: 299 LDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGFNGAD 356
Query: 862 MYALCADAWFHAAK 875
+ +C +A A +
Sbjct: 357 LRNVCTEAGMFAIR 370
Score = 41 (19.5 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 370 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 401
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 393 (143.4 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 106/299 (35%), Positives = 160/299 (53%)
Query: 598 HALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAM- 653
H ++A + G S VDK+ EPG S L +N +S+ + + LV M
Sbjct: 128 HGIIATSVGPEYYVNILSFVDKDLLEPGCSVLL----NNKTNSVVGILLDEVDPLVSVMK 183
Query: 654 -ERSKKRNASALG-----------APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLL 700
E++ + + +G A +LPL H +L+ G++ GV+LYGPPGTGKTLL
Sbjct: 184 VEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLL 243
Query: 701 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 760
AKAVA E S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 244 AKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR- 302
Query: 761 ASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYV 818
SGG + R + ++L ++DG DS D+ +I A+NR D +DPAL+RPGR D+ + +
Sbjct: 303 YEATSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 819 GVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
N D + R+ + T K + DV L +GAD+ A+C +A A + +
Sbjct: 362 P-NPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLALRER 418
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 393 (143.4 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 106/299 (35%), Positives = 160/299 (53%)
Query: 598 HALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAM- 653
H ++A + G S VDK+ EPG S L +N +S+ + + LV M
Sbjct: 128 HGIIATSVGPEYYVNILSFVDKDLLEPGCSVLL----NNKTNSVVGILLDEVDPLVSVMK 183
Query: 654 -ERSKKRNASALG-----------APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLL 700
E++ + + +G A +LPL H +L+ G++ GV+LYGPPGTGKTLL
Sbjct: 184 VEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLL 243
Query: 701 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 760
AKAVA E S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 244 AKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR- 302
Query: 761 ASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYV 818
SGG + R + ++L ++DG DS D+ +I A+NR D +DPAL+RPGR D+ + +
Sbjct: 303 YEATSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 819 GVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
N D + R+ + T K + DV L +GAD+ A+C +A A + +
Sbjct: 362 P-NPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLALRER 418
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 409 (149.0 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 91/214 (42%), Positives = 136/214 (63%)
Query: 671 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 729
L ++ F + G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M++G
Sbjct: 178 LKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 237
Query: 730 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSS 787
VRD+F +A+ PC+IF DE+D++ RGA G GG +R ++Q+L E+DG D+
Sbjct: 238 SRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQILVEMDGF-DTD 295
Query: 788 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLY 847
+ +I A+NRPD++DPALLRPGRFD+ + + D++ RE +LK + L + V+L
Sbjct: 296 TSVIVIAATNRPDILDPALLRPGRFDRRVVLD-KPDITGREAILKIHAKGKPLADTVNLE 354
Query: 848 SIAKKCPPNFTGADMYALCADAWFHAAK--RKVL 879
++AK+ F+GAD+ L +A AA+ RKV+
Sbjct: 355 NLAKQTV-GFSGADLANLLNEAAILAARKNRKVV 387
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 392 (143.0 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 106/321 (33%), Positives = 166/321 (51%)
Query: 561 MLSQLLQPVSELT---SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVD 617
++ Q L+P+ E T S T +V I+ + R+L L A + L R SN+ VD
Sbjct: 78 VIGQFLEPIDENTGIVSSTTGSNYVVRILST----LDREL--LKASSSVALHRHSNALVD 131
Query: 618 KNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF 677
P E+D + + D +G D+ K + K+ A +LPL DL+
Sbjct: 132 ILPP-EADSSISIVGEDQKPDVTYADVGGLDMQK--QEIKE-------AVELPLTQGDLY 181
Query: 678 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 736
S G+ GVLLYGPPGTGKT+L KAVA + +F+ + G E + Y+GE + VRD+F
Sbjct: 182 SQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVF 241
Query: 737 QKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 795
+ AR P +IF DE+D++A R A + + R++ ++L ++DG D + + +I A
Sbjct: 242 RLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTSTVKVIMA 300
Query: 796 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 855
+NR D +DPALLRPGR D+ + D R + + K L + L S+ + P
Sbjct: 301 TNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDP 360
Query: 856 NFTGADMYALCADAWFHAAKR 876
+GA + A+ +A A ++
Sbjct: 361 -LSGAVIAAIMQEAGLRAVRK 380
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 392 (143.0 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 86/214 (40%), Positives = 137/214 (64%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA--TECSLNFLSVKGPELINMY 724
+LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA TEC+ F+ V G EL+ +
Sbjct: 160 ELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECT--FIRVSGSELVQKF 217
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 784
IGE + VR++F AR P +IF DE+DS+ AR +G + R + ++L ++DG
Sbjct: 218 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLELLNQLDGF- 276
Query: 785 DSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLED 843
++++++ +I A+NR D++D ALLRPGR D K+ + N + R +LK +RK L
Sbjct: 277 EATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRG 334
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
++L IA++ P +GA++ +C +A +A + +
Sbjct: 335 INLRKIAEEMP-GASGAEVKGVCTEAGMYALRER 367
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 392 (143.0 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 115/348 (33%), Positives = 178/348 (51%)
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMER-- 655
H L D G + + E +K ++ A + + +T +DLV+A+ER
Sbjct: 142 HNLHNDRGKAVRSREKKEQNKGREEKNKSPAAATEPETNKFDSTGY--DKDLVEALERDI 199
Query: 656 -SKKRN------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLA 701
S+ N A + A KL P+ + F R GVL+ GPPGTGKTLLA
Sbjct: 200 ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLA 259
Query: 702 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA 761
KAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG
Sbjct: 260 KAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGT 319
Query: 762 SGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815
S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K
Sbjct: 320 S-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376
Query: 816 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 875
+Y+ + S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C DA A +
Sbjct: 377 IYIPLPS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCRDASLMAMR 434
Query: 876 RKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
R++ + + +DF L+++S S+S A++++YE
Sbjct: 435 RRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 392 (143.0 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 106/321 (33%), Positives = 166/321 (51%)
Query: 561 MLSQLLQPVSELT---SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVD 617
++ Q L+P+ E T S T +V I+ + R+L L A + L R SN+ VD
Sbjct: 78 VIGQFLEPIDENTGIVSSTTGSNYVVRILST----LDREL--LKASSSVALHRHSNALVD 131
Query: 618 KNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLF 677
P E+D + + D +G D+ K + K+ A +LPL DL+
Sbjct: 132 ILPP-EADSSISIVGEDQKPDVTYADVGGLDMQK--QEIKE-------AVELPLTQGDLY 181
Query: 678 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 736
S G+ GVLLYGPPGTGKT+L KAVA + +F+ + G E + Y+GE + VRD+F
Sbjct: 182 SQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVF 241
Query: 737 QKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 795
+ AR P +IF DE+D++A R A + + R++ ++L ++DG D + + +I A
Sbjct: 242 RLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTSTVKVIMA 300
Query: 796 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 855
+NR D +DPALLRPGR D+ + D R + + K L + L S+ + P
Sbjct: 301 TNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDP 360
Query: 856 NFTGADMYALCADAWFHAAKR 876
+GA + A+ +A A ++
Sbjct: 361 -LSGAVIAAIMQEAGLRAVRK 380
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 392 (143.0 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 83/210 (39%), Positives = 130/210 (61%)
Query: 669 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 727
LP+ HK+ F G+R GVLLYGPPGTGKTL+A+A A + + FL + GP+L+ M+IG+
Sbjct: 188 LPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
Query: 728 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDS 786
K VRD F A+ PC+IF DE+D++ R S SG + R + ++L ++DG + S
Sbjct: 248 GAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS-S 306
Query: 787 SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSL 846
+ +I A+NR D++DPAL+R GR D+ + ++ + R R+L+ +RK + DV+
Sbjct: 307 DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA-RGRILQIHSRKMNVNADVNF 365
Query: 847 YSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+A+ +F GA + A+C +A A +R
Sbjct: 366 EELARSTD-DFNGAQLKAVCVEAGMLALRR 394
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 101/277 (36%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKK--RNASALG------- 665
+VDK PG DL + D+ I T + VKAME +K S +G
Sbjct: 123 DVDKLRPG--DLVG--INKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQ 178
Query: 666 ----APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
A LP+ HK+ F S G++ GVL+YGPPGTGKTLLA+A A + + +L + GP+L
Sbjct: 179 ELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQL 238
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S SG + R + ++L +
Sbjct: 239 VQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQ 298
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG + S ++ +I A+NR D++DPALLR GR D+ + + ++ + R +L+ +RK
Sbjct: 299 LDGFS-SDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEA-RAHILQIHSRKMN 356
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ +F GA + A+C +A A +R
Sbjct: 357 VSADVNFDELARSSE-DFNGAQLKAVCVEAGMIALRR 392
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 87 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 142
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 143 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 202
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 203 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 262
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 263 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 320
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 321 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 356
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 91 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 146
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 147 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 206
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 207 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 266
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 267 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 324
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 325 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 360
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 196
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 197 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 256
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 257 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 316
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 317 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 374
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 375 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 99 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 154
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 155 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 214
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 215 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 274
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 275 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 332
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 333 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 368
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 196
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 197 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 256
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 257 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 316
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 317 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 374
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 375 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 148 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 203
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 204 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 263
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 264 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 323
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 324 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 381
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 382 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 417
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 106 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 161
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 162 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 221
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 222 VQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQ 281
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 282 LDGFQPTTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 339
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 340 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGIIALRR 375
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 144 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 199
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 200 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 259
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 260 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 319
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 320 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 377
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 378 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 413
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 89/249 (35%), Positives = 144/249 (57%)
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALG-APKLPLLHKDLFSS-GLRKRSGVLLYGPPG 694
S+ QV K D+ K L +LPLL + F G+ G++LYGPPG
Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223
Query: 695 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 754
TGKTL A+AVA F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D+
Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 283
Query: 755 LAPAR---GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGR 811
+ AR GA GD+ + R + +++ ++DG D ++ ++ A+NRP+ +D AL+RPGR
Sbjct: 284 IGGARFDDGAGGDNE--VQRTMLELITQLDGF-DPRGNIKVLFATNRPNTLDEALMRPGR 340
Query: 812 FDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWF 871
D+ + G+ D+ R +L+ + + +D+ IA+ CP TGA++ ++C +A
Sbjct: 341 IDRKVEFGL-PDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQ-TGAELRSVCTEAGM 398
Query: 872 HA--AKRKV 878
A A+R+V
Sbjct: 399 FAIRARRRV 407
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 107/318 (33%), Positives = 164/318 (51%)
Query: 561 MLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE 620
++ Q L+ + + T+ GS ++ S + R+L L A L R SN+ VD
Sbjct: 57 VIGQFLEAIDQNTAIVGSTTGSNYVVRILST-LDREL--LKPSASVALQRHSNALVDILP 113
Query: 621 PGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS- 679
P E+D + + D + +G D+ K R A +LPL DL+
Sbjct: 114 P-EADSSISMLRPDERPDVSYADVGGLDVQKQEVRE---------AVELPLTQGDLYRQI 163
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G+ GVLLYGPPGTGKT+L KAVA + NF+ V G E + Y+GE + VRD+F+ A
Sbjct: 164 GIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMA 223
Query: 740 RSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 798
R P +IF DE+D++A R A + + R++ ++L ++DG D ++ +I A+NR
Sbjct: 224 RENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGF-DQGANVKVIMATNR 282
Query: 799 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 858
D +DPALLRPGR D+ + D R V + +T K L +V L + + P +
Sbjct: 283 ADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMR-PDASS 341
Query: 859 GADMYALCADAWFHAAKR 876
GA + A+ DA A ++
Sbjct: 342 GAQIAAIMQDAGLLAVRK 359
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 196
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 197 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 256
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 257 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 316
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 317 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 374
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 375 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 144 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 199
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 200 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 259
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 260 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 319
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 320 LDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 377
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 378 VSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 413
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 391 (142.7 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/277 (35%), Positives = 155/277 (55%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME---RSKKRNASALGAPK--- 668
+ +K +PG DL + D+ I T + VKAME R ++ + G K
Sbjct: 129 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 184
Query: 669 -------LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720
LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A + FL + GP+L
Sbjct: 185 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 244
Query: 721 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAE 779
+ M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L +
Sbjct: 245 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 304
Query: 780 IDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839
+DG + Q + +I A+NR D++DPALLR GR D+ + + ++ + R R+++ +RK
Sbjct: 305 LDGFQPNMQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMN 362
Query: 840 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 876
+ DV+ +A+ C +F GA A+C +A A +R
Sbjct: 363 VCPDVNFEELAR-CTDDFNGAQCKAVCVEAGMIALRR 398
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 376 (137.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLRNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 376 (137.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLRNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 376 (137.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLRNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 376 (137.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLRNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 376 (137.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 104 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 153
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 154 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 213
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 214 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 272
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 273 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 330
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 331 NGADLRNVCTEAGMFAIR 348
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 348 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 379
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 408 (148.7 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 92/199 (46%), Positives = 127/199 (63%)
Query: 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 739
G R GVLL GPPGTGKTLLAKA A E + F S+ G + + M++G VRD+F+ A
Sbjct: 190 GARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA 249
Query: 740 RSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASN 797
+ PC+IF DE+D++ RGA G GG +R ++Q+L E+DG + +++ + II A+N
Sbjct: 250 KKNAPCLIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFS-ANEGIIIIAATN 307
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
R D++DPALLRPGRFD+ + V DV RE VLK R L E V+L SIA + P F
Sbjct: 308 RADILDPALLRPGRFDRQITVD-RPDVIGREAVLKVHARNKPLDETVNLKSIAMRTP-GF 365
Query: 858 TGADMYALCADAWFHAAKR 876
+GAD+ L +A AA++
Sbjct: 366 SGADLENLLNEAALVAARQ 384
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 390 (142.3 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 114/343 (33%), Positives = 177/343 (51%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMER---SKKR 659
D G + + E +K ++ A V + + +T +DLV+A+ER S+
Sbjct: 147 DRGKAVRCREKKEQNKGREEKNKSPAAVTEPETNKFDSTGY--DKDLVEALERDIISQNP 204
Query: 660 N------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVAT 706
N A + A KL P+ + F R GVL+ GPPGTGKTLLAKAVAT
Sbjct: 205 NVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 264
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
EC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S +
Sbjct: 265 ECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS-EEH 323
Query: 767 GVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 820
RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 324 EASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPL 381
Query: 821 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 880
S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C DA A +R++
Sbjct: 382 PS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCRDASLMAMRRRIEG 439
Query: 881 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+ + +DF L+++S S+S A++++YE
Sbjct: 440 LTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 390 (142.3 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 114/343 (33%), Positives = 177/343 (51%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMER---SKKR 659
D G + + E +K ++ A V + + +T +DLV+A+ER S+
Sbjct: 147 DRGKAVRCREKKEQNKGREEKNKSPAAVTEPETNKFDSTGY--DKDLVEALERDIISQNP 204
Query: 660 N------ASALGAPKL-------PLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVAT 706
N A + A KL P+ + F R GVL+ GPPGTGKTLLAKAVAT
Sbjct: 205 NVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 264
Query: 707 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 766
EC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S +
Sbjct: 265 ECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS-EEH 323
Query: 767 GVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 820
RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 324 EASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPL 381
Query: 821 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 880
S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C DA A +R++
Sbjct: 382 PS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCRDASLMAMRRRIEG 439
Query: 881 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+ + +DF L+++S S+S A++++YE
Sbjct: 440 LTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 390 (142.3 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 119/402 (29%), Positives = 193/402 (48%)
Query: 510 YFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEM-LSQLLQP 568
YF +K++EK + LL D + ++R + + Q V + + Q L+P
Sbjct: 48 YFKLKKLEK---EYELLTLQEDYIKDEQRHLKRELKR--AQEEVKRIQSVPLVIGQFLEP 102
Query: 569 VSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTA 628
+ + T S + ++ S + R+L L L R SN+ VD P +
Sbjct: 103 IDQNTGIVSSTTGMSYVVRILST-LDREL--LKPSMSVALHRHSNALVDILPPDSDSSIS 159
Query: 629 KVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS-GLRKRSGV 687
+ N+ + V G + M++ + R A +LPL+ DL+ G+ GV
Sbjct: 160 VMGENEKPDVTYADVGGLD-----MQKQEIREAV-----ELPLVQADLYEQIGIDPPRGV 209
Query: 688 LLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 747
LLYGPPGTGKT+L KAVA F+ V G E ++ Y+GE + VRD+F+ AR P +I
Sbjct: 210 LLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSII 269
Query: 748 FFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPAL 806
F DE+DS+A R A S + R++ ++L ++DG D S ++ +I A+NR D +DPAL
Sbjct: 270 FIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGF-DQSTNVKVIMATNRADTLDPAL 328
Query: 807 LRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALC 866
LRPGR D+ + D R + + K L + L S+ + + +GA + A+
Sbjct: 329 LRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIR-NDSLSGAVIAAIM 387
Query: 867 ADAWFHAAKRK---VLXXXXXXXXXRIDQADSVVVEYDDFVK 905
+A A ++ +L + D+ V ++D F K
Sbjct: 388 QEAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFD-FYK 428
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 390 (142.3 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 88/215 (40%), Positives = 129/215 (60%)
Query: 666 APKLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 724
A +LPL H +L+ G++ GV+LYG PGTGKTLLAKAVA S FL V G ELI Y
Sbjct: 203 AVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKY 262
Query: 725 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMD--RVVSQMLAEIDG 782
+G+ K VR++F+ A P ++F DE+D++ R +SGG + R + ++L ++DG
Sbjct: 263 LGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-YDANSGGEREIQRTMLELLNQLDG 321
Query: 783 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 842
DS D+ +I A+NR + +DPALLRPGR D+ + + D+ R R+ + T K L E
Sbjct: 322 F-DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL-PDIKTRRRIFQIHTSKMTLAE 379
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877
DV+L F+GAD+ A+C +A A + +
Sbjct: 380 DVNLEEFVMT-KDEFSGADIKAICTEAGLLALRER 413
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 375 (137.1 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 87/258 (33%), Positives = 144/258 (55%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D ++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLRNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 375 (137.1 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 87/258 (33%), Positives = 145/258 (56%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D +++ +++ G + ++ + +LPL + +LF
Sbjct: 112 PREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE----------VIELPLTNPELFQR 161
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+N
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATN 280
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K F
Sbjct: 281 RPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDGF 338
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 339 NGADLGNVCTEAGMFAIR 356
Score = 41 (19.5 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 892 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 923
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 417 (151.9 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 97/255 (38%), Positives = 148/255 (58%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS-----LNFLSVKGPELINM 723
PLL+ ++F ++ G L YGPPGTGKTL+A+A+A ECS + F KG + ++
Sbjct: 422 PLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSK 481
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
++GESE+ +R +F +A RP +IFFDE+D LAP R + D + +VS +LA +DGL
Sbjct: 482 WVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL 539
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK-LLE 842
D+ ++ +IGA+NR D IDPAL RPGRFD+ + D R+ +L+ TR + L
Sbjct: 540 -DNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNL-PDQKARKHILQIHTRDWNPKLS 597
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 902
D L +A+KC + GAD+ ALC +A A +R+ ++D S+V+ D
Sbjct: 598 DAFLGELAEKCV-GYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD-VSSIVLNAQD 655
Query: 903 FVKVLRELSPSLSMA 917
F ++ + P+ A
Sbjct: 656 FYHAMQNIVPASQRA 670
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 389 (142.0 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 92/258 (35%), Positives = 144/258 (55%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSS 679
P E D L ++H D + + + G D ++ + +LPLL+ +LF
Sbjct: 120 PREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELRE----------VIELPLLNPELFLR 169
Query: 680 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 738
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 170 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 229
Query: 739 ARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797
AR +PC+IF DE+D++ R + G S + R + ++L ++DG DS + +I A+N
Sbjct: 230 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DSLGQVKMIMATN 288
Query: 798 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 857
RPD +DPALLRPGR D+ + + + ++ + R +LK K ++ Y K NF
Sbjct: 289 RPDSLDPALLRPGRLDRKIEIPLPNEQA-RLEILKIHALKIAKHGEID-YEAIVKLSDNF 346
Query: 858 TGADMYALCADAWFHAAK 875
GAD+ +C +A A +
Sbjct: 347 NGADLRNVCTEAGLFAIR 364
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 410 (149.4 bits), Expect = 5.8e-35, P = 5.8e-35
Identities = 96/256 (37%), Positives = 146/256 (57%)
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKR 684
+ TAK+ N N + V G E+ +K + K P ++DL G +
Sbjct: 257 ETTAKILKN-NIDVRFADVAGCEE-------AKLEIMEFVNFLKNPKQYQDL---GAKIP 305
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
G +L GPPGTGKTLLAKA A E + F++V G E + M++G VRD+F AR P
Sbjct: 306 KGAMLTGPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAP 365
Query: 745 CVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
C++F DE+D++ RG G GG ++ ++QML E+DG N S+ ++ ++ +NRPD++
Sbjct: 366 CILFIDEIDAIGRKRGR-GHLGGQSEQENTLNQMLVEMDGFN-STTNVVVLAGTNRPDIL 423
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP---PNFTG 859
DPAL RPGRFD+ +Y+G D+ R + K R KL E ++ ++++K P FTG
Sbjct: 424 DPALTRPGRFDRQIYIGP-PDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTG 482
Query: 860 ADMYALCADAWFHAAK 875
AD+ +C +A AA+
Sbjct: 483 ADISNVCNEAALIAAR 498
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 417 (151.9 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 97/255 (38%), Positives = 148/255 (58%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS-----LNFLSVKGPELINM 723
PLL+ ++F ++ G L YGPPGTGKTL+A+A+A ECS + F KG + ++
Sbjct: 309 PLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSK 368
Query: 724 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 783
++GESE+ +R +F +A RP +IFFDE+D LAP R + D + +VS +LA +DGL
Sbjct: 369 WVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL 426
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK-LLE 842
D+ ++ +IGA+NR D IDPAL RPGRFD+ + D R+ +L+ TR + L
Sbjct: 427 -DNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNL-PDQKARKHILQIHTRDWNPKLS 484
Query: 843 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 902
D L +A+KC + GAD+ ALC +A A +R+ ++D S+V+ D
Sbjct: 485 DAFLGELAEKCV-GYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD-VSSIVLNAQD 542
Query: 903 FVKVLRELSPSLSMA 917
F ++ + P+ A
Sbjct: 543 FYHAMQNIVPASQRA 557
Score = 50 (22.7 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 229 GLQSVGQLPKYASHLRVSFVKIPE-CGTLESLKGSSAIEAEDRQ-EKIDLA--LHNYFEV 284
G + G+ K+ + + + E CG LES + IE E+ + E+ D L V
Sbjct: 109 GEEEGGRKEKHIQTIYIYMTQDGEVCGKLESQEEDGDIEVEEAEGEENDRPYNLRQRKTV 168
Query: 285 DRYLA 289
DRY A
Sbjct: 169 DRYQA 173
>UNIPROTKB|E1BHF2 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:DAAA02033094
IPI:IPI00710392 RefSeq:NP_001179847.1 UniGene:Bt.104141
ProteinModelPortal:E1BHF2 PRIDE:E1BHF2 Ensembl:ENSBTAT00000012297
GeneID:537739 KEGG:bta:537739 NextBio:20877204 Uniprot:E1BHF2
Length = 490
Score = 388 (141.6 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 106/292 (36%), Positives = 158/292 (54%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 707
D + +E +KK A+ LP+ D F R GVL+ GPPGTGKT+LAKAVATE
Sbjct: 208 DDIADLEEAKKLLREAV---VLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATE 264
Query: 708 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 767
C F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S D
Sbjct: 265 CGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-DEHE 323
Query: 768 VMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 324 ASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
+ R +LK R+ +L D+ L IA+K ++GAD+ +C DA A +R++
Sbjct: 382 T-AKGRTELLKINLREVELDPDIQLEDIAEKIE-GYSGADITNVCRDASLMAMRRRINGL 439
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+ + V DF L++++ S+S A+L+KYE +F GS+
Sbjct: 440 SPEEIRALSKEELQMPVTRGDFELALKKIAKSVSAADLEKYEKWMVEF-GSA 490
>UNIPROTKB|F1MAX6 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00550000074466 EMBL:DAAA02033094 IPI:IPI00824872
Ensembl:ENSBTAT00000052665 Uniprot:F1MAX6
Length = 499
Score = 388 (141.6 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 106/292 (36%), Positives = 158/292 (54%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 707
D + +E +KK A+ LP+ D F R GVL+ GPPGTGKT+LAKAVATE
Sbjct: 217 DDIADLEEAKKLLREAV---VLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATE 273
Query: 708 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 767
C F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S D
Sbjct: 274 CGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-DEHE 332
Query: 768 VMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 333 ASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 390
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
+ R +LK R+ +L D+ L IA+K ++GAD+ +C DA A +R++
Sbjct: 391 T-AKGRTELLKINLREVELDPDIQLEDIAEKIE-GYSGADITNVCRDASLMAMRRRINGL 448
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+ + V DF L++++ S+S A+L+KYE +F GS+
Sbjct: 449 SPEEIRALSKEELQMPVTRGDFELALKKIAKSVSAADLEKYEKWMVEF-GSA 499
>UNIPROTKB|Q9BW62 [details] [associations]
symbol:KATNAL1 "Katanin p60 ATPase-containing subunit
A-like 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:CH471075
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024 EMBL:AK291439
EMBL:AL356750 EMBL:BC000612 IPI:IPI00789455 RefSeq:NP_001014402.1
RefSeq:NP_115492.1 UniGene:Hs.243596 ProteinModelPortal:Q9BW62
SMR:Q9BW62 IntAct:Q9BW62 MINT:MINT-1463957 STRING:Q9BW62
PhosphoSite:Q9BW62 DMDM:60390214 PaxDb:Q9BW62 PRIDE:Q9BW62
DNASU:84056 Ensembl:ENST00000380615 Ensembl:ENST00000380617
GeneID:84056 KEGG:hsa:84056 UCSC:uc001uss.3 GeneCards:GC13M030776
HGNC:HGNC:28361 HPA:HPA046205 MIM:614764 neXtProt:NX_Q9BW62
PharmGKB:PA134951885 HOGENOM:HOG000225142 InParanoid:Q9BW62
OMA:GVMQQIQ GenomeRNAi:84056 NextBio:73193 ArrayExpress:Q9BW62
Bgee:Q9BW62 CleanEx:HS_KATNAL1 Genevestigator:Q9BW62
GermOnline:ENSG00000102781 Uniprot:Q9BW62
Length = 490
Score = 388 (141.6 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 106/292 (36%), Positives = 158/292 (54%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 707
D + +E +KK A+ LP+ D F R GVL+ GPPGTGKT+LAKAVATE
Sbjct: 208 DDIADLEEAKKLLREAV---VLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATE 264
Query: 708 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 767
C F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S D
Sbjct: 265 CGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-DEHE 323
Query: 768 VMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 324 ASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
+ R +LK R+ +L D+ L IA+K ++GAD+ +C DA A +R++
Sbjct: 382 T-AKGRAELLKINLREVELDPDIQLEDIAEKIE-GYSGADITNVCRDASLMAMRRRINGL 439
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+ + V DF L++++ S+S A+L+KYE +F GS+
Sbjct: 440 SPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEF-GSA 490
>UNIPROTKB|F1RST8 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K07767 OMA:GVMQQIQ
GeneTree:ENSGT00550000074466 EMBL:CU210871 RefSeq:XP_001928701.1
UniGene:Ssc.44020 ProteinModelPortal:F1RST8
Ensembl:ENSSSCT00000010220 GeneID:100156612 KEGG:ssc:100156612
Uniprot:F1RST8
Length = 490
Score = 388 (141.6 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 106/292 (36%), Positives = 158/292 (54%)
Query: 648 DLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 707
D + +E +KK A+ LP+ D F R GVL+ GPPGTGKT+LAKAVATE
Sbjct: 208 DDIADLEEAKKLLREAV---VLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATE 264
Query: 708 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 767
C F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S D
Sbjct: 265 CGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-DEHE 323
Query: 768 VMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 821
RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 324 ASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
Query: 822 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 881
+ R +LK R+ +L D+ L IA+K ++GAD+ +C DA A +R++
Sbjct: 382 T-AKGRTELLKINLREVELDPDIQLEDIAEKIE-GYSGADITNVCRDASLMAMRRRINGL 439
Query: 882 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 933
+ + V DF L++++ S+S A+L+KYE +F GS+
Sbjct: 440 SPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEF-GSA 490
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 410 (149.4 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 97/256 (37%), Positives = 146/256 (57%)
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKR 684
+ TAK+ N N + V G E+ +K + K P ++DL G +
Sbjct: 285 ETTAKILKN-NIDVRFADVAGCEE-------AKLEIMEFVNFLKNPKQYQDL---GAKIP 333
Query: 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744
G +L GPPGTGKTLLAKA A E ++ F++V G E + M++G VRD+F AR P
Sbjct: 334 KGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAP 393
Query: 745 CVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 802
C++F DE+D++ RG G GG ++ ++QML E+DG N SS ++ ++ +NRPD++
Sbjct: 394 CILFIDEIDAIGRKRGR-GHLGGQSEQENTLNQMLVEMDGFN-SSTNVVVLAGTNRPDIL 451
Query: 803 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP---PNFTG 859
DPAL RPGRFD+ +Y+G D+ R + K R KL +S ++++K P FTG
Sbjct: 452 DPALTRPGRFDRQIYIGP-PDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTG 510
Query: 860 ADMYALCADAWFHAAK 875
AD+ +C +A AA+
Sbjct: 511 ADISNVCNEAALIAAR 526
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 401 (146.2 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 87/210 (41%), Positives = 133/210 (63%)
Query: 673 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 731
H +++ G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+
Sbjct: 180 HPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 239
Query: 732 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQD 789
+R++F++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 240 LRELFEQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATAR 297
Query: 790 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 849
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +
Sbjct: 298 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHL 356
Query: 850 AKKCPPNFTGADMYALCADAWFHAAKRKVL 879
A P F GAD+ ALC +A A R ++
Sbjct: 357 AH-LTPGFVGADLMALCREAAMCAVNRVLM 385
Score = 301 (111.0 bits), Expect = 1.8e-32, Sum P(4) = 1.8e-32
Identities = 58/91 (63%), Positives = 73/91 (80%)
Query: 670 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 728
P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GES
Sbjct: 494 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 553
Query: 729 EKNVRDIFQKARSARPCVIFFDELDSLAPAR 759
E+ VR +FQ+A+++ PCVIFFDE+D+L P R
Sbjct: 554 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRR 584
Score = 98 (39.6 bits), Expect = 1.8e-32, Sum P(4) = 1.8e-32
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 195 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 254
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 255 IFIDEID 261
Score = 80 (33.2 bits), Expect = 1.8e-32, Sum P(4) = 1.8e-32
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 297 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 352
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 353 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 403
Score = 42 (19.8 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 891 DQADSVVVEYDDFVKVLRELSPS 913
+Q + +E +DF+ L + PS
Sbjct: 438 EQMQGLCIELNDFIVALSSVQPS 460
Score = 37 (18.1 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQ 271
P+ A+H+ S + + G +S+ S+ E E R+
Sbjct: 7 PQSANHMNSSLLSLYRKGNPDSV--SNTPEMEQRE 39
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 387 (141.3 bits), Expect = 8.4e-35, P = 8.4e-35
Identities = 83/217 (38%), Positives = 134/217 (61%)
Query: 668 KLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 726
++PLL + F + G+ G LLYGPPGTGKTL A+AVA F+ V G EL+ Y+G
Sbjct: 202 EMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 261
Query: 727 ESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GASGDSGGVMDRVVSQMLAEIDGL 783
E + VR++F+ AR+ + C+IFFDE+D++ AR GA GD+ + R + +++ ++DG
Sbjct: 262 EGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNE--VQRTMLELITQLDGF 319
Query: 784 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 843
D+ ++ ++ A+NRP +DPAL+RPGR D+ + + DV R +L+ + + D
Sbjct: 320 -DARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSL-PDVEGRANILRIHAKSMSVERD 377
Query: 844 VSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 878
+ I++ CP N TGA++ ++ +A A A+RKV
Sbjct: 378 IRWELISRLCP-NATGAELRSVATEAGMFAIRARRKV 413
WARNING: HSPs involving 456 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 934 913 0.00089 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 706
No. of states in DFA: 613 (65 KB)
Total size of DFA: 374 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 81.76u 0.10s 81.86t Elapsed: 00:00:04
Total cpu time: 81.84u 0.11s 81.95t Elapsed: 00:00:04
Start: Tue May 21 19:06:46 2013 End: Tue May 21 19:06:50 2013
WARNINGS ISSUED: 2