Query 002337
Match_columns 934
No_of_seqs 768 out of 4488
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 22:13:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002337.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002337hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 1.6E-41 1.2E-45 362.2 20.6 221 671-911 31-253 (256)
2 d1e32a2 c.37.1.20 (A:201-458) 100.0 6.8E-41 5E-45 358.9 19.7 252 643-909 6-258 (258)
3 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 5.4E-40 4E-44 348.9 21.8 234 643-907 11-246 (247)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.3E-37 9.5E-42 334.4 15.4 237 669-909 25-263 (265)
5 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 2.3E-31 1.7E-35 283.2 24.1 237 366-657 12-253 (256)
6 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 3.9E-31 2.8E-35 280.3 20.6 219 366-611 9-232 (247)
7 d1e32a2 c.37.1.20 (A:201-458) 100.0 3.7E-31 2.7E-35 282.8 20.1 248 366-654 4-257 (258)
8 d1r7ra3 c.37.1.20 (A:471-735) 100.0 5.7E-29 4.2E-33 266.6 14.5 220 366-612 7-232 (265)
9 d1w44a_ c.37.1.11 (A:) NTPase 99.9 1.3E-29 9.2E-34 275.5 -7.8 166 669-839 106-278 (321)
10 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 1.3E-24 9.3E-29 229.9 9.6 169 681-858 37-206 (246)
11 d1d2na_ c.37.1.20 (A:) Hexamer 99.8 7.9E-21 5.7E-25 200.5 12.4 194 365-593 8-206 (246)
12 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 8.3E-21 6.1E-25 207.1 11.5 146 683-833 48-212 (309)
13 d1w44a_ c.37.1.11 (A:) NTPase 99.7 9.8E-20 7.2E-24 197.1 2.9 150 394-569 119-277 (321)
14 d1in4a2 c.37.1.20 (A:17-254) H 99.7 5.9E-16 4.3E-20 161.3 19.2 191 684-910 35-234 (238)
15 d1svma_ c.37.1.20 (A:) Papillo 99.6 1.9E-18 1.3E-22 191.5 -3.1 172 679-877 149-338 (362)
16 d1ofha_ c.37.1.20 (A:) HslU {H 99.6 1.1E-16 7.9E-21 174.2 10.9 179 373-566 20-214 (309)
17 d1in4a2 c.37.1.20 (A:17-254) H 99.6 3.7E-14 2.7E-18 147.5 22.0 200 373-608 15-214 (238)
18 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.5 3E-14 2.2E-18 148.4 16.6 193 683-910 34-235 (239)
19 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.5 6.7E-13 4.9E-17 138.0 22.1 197 373-604 15-211 (239)
20 d1r6bx2 c.37.1.20 (X:169-436) 99.5 1.4E-12 1E-16 137.3 21.2 200 368-608 20-241 (268)
21 d1e32a3 d.31.1.1 (A:107-200) M 99.4 7.4E-14 5.4E-18 120.7 8.4 67 238-337 3-70 (94)
22 d1sxja2 c.37.1.20 (A:295-547) 99.4 9.8E-13 7.1E-17 137.5 14.2 165 680-868 48-226 (253)
23 d1r6bx2 c.37.1.20 (X:169-436) 99.4 1.1E-12 7.9E-17 138.2 13.6 203 682-911 37-266 (268)
24 d1w5sa2 c.37.1.20 (A:7-293) CD 99.4 3E-12 2.2E-16 135.0 16.5 198 686-909 48-286 (287)
25 d1iqpa2 c.37.1.20 (A:2-232) Re 99.4 4.6E-12 3.3E-16 130.8 16.4 172 366-591 24-202 (231)
26 d1iqpa2 c.37.1.20 (A:2-232) Re 99.3 1.7E-12 1.2E-16 134.1 10.3 143 685-853 46-200 (231)
27 d1sxja2 c.37.1.20 (A:295-547) 99.3 2.8E-11 2.1E-15 126.1 19.1 184 373-602 20-225 (253)
28 d1fnna2 c.37.1.20 (A:1-276) CD 99.3 1.9E-11 1.4E-15 127.9 17.1 197 682-910 41-273 (276)
29 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 2.5E-12 1.8E-16 128.4 8.8 152 369-562 25-194 (195)
30 d1qvra3 c.37.1.20 (A:536-850) 99.2 1.4E-11 1E-15 133.3 13.6 178 685-880 54-291 (315)
31 d1sxjc2 c.37.1.20 (C:12-238) R 99.2 7.2E-12 5.3E-16 128.8 10.6 183 686-907 37-225 (227)
32 d1njfa_ c.37.1.20 (A:) delta p 99.2 2.3E-11 1.7E-15 126.5 14.0 153 684-867 34-215 (239)
33 d1sxjc2 c.37.1.20 (C:12-238) R 99.2 4.8E-11 3.5E-15 122.5 15.9 168 373-591 20-192 (227)
34 d1jbka_ c.37.1.20 (A:) ClpB, A 99.2 5.6E-12 4.1E-16 125.9 7.8 136 682-831 41-194 (195)
35 d1r6bx3 c.37.1.20 (X:437-751) 99.2 3.9E-11 2.9E-15 129.9 15.1 208 641-879 22-285 (315)
36 d1qvra2 c.37.1.20 (A:149-535) 99.2 3.9E-11 2.8E-15 132.9 14.6 199 368-608 24-244 (387)
37 d1w5sa2 c.37.1.20 (A:7-293) CD 99.2 1.6E-10 1.2E-14 121.4 18.4 185 398-610 47-269 (287)
38 d1sxje2 c.37.1.20 (E:4-255) Re 99.2 1.1E-10 8E-15 121.4 16.8 72 521-600 159-230 (252)
39 d1njfa_ c.37.1.20 (A:) delta p 99.2 3.3E-10 2.4E-14 117.5 19.5 163 373-591 18-208 (239)
40 d1sxjd2 c.37.1.20 (D:26-262) R 99.2 1.2E-10 9E-15 119.8 15.8 185 685-907 34-235 (237)
41 d1fnna2 c.37.1.20 (A:1-276) CD 99.2 1.7E-09 1.2E-13 112.8 24.9 216 374-656 23-273 (276)
42 d1svma_ c.37.1.20 (A:) Papillo 99.2 4.3E-13 3.1E-17 148.0 -3.9 178 394-611 151-337 (362)
43 d1sxje2 c.37.1.20 (E:4-255) Re 99.1 6.6E-11 4.8E-15 123.1 12.3 99 744-867 132-232 (252)
44 d1sxjb2 c.37.1.20 (B:7-230) Re 99.1 3.1E-10 2.3E-14 116.3 16.4 162 373-591 21-194 (224)
45 d1sxjd2 c.37.1.20 (D:26-262) R 99.1 6.4E-10 4.7E-14 114.3 18.3 149 399-591 35-201 (237)
46 d1sxjb2 c.37.1.20 (B:7-230) Re 99.1 2.3E-10 1.6E-14 117.3 13.9 152 685-867 37-201 (224)
47 d1um8a_ c.37.1.20 (A:) ClpX {H 99.1 2.1E-10 1.5E-14 126.3 13.4 148 682-832 66-279 (364)
48 d1l8qa2 c.37.1.20 (A:77-289) C 99.1 2.5E-10 1.8E-14 116.5 11.9 165 685-868 37-209 (213)
49 d1r6bx3 c.37.1.20 (X:437-751) 99.1 9.1E-10 6.6E-14 119.0 17.1 207 371-605 26-276 (315)
50 d1qvra3 c.37.1.20 (A:536-850) 99.1 5.4E-10 3.9E-14 120.7 15.1 189 395-609 51-285 (315)
51 d1qvra2 c.37.1.20 (A:149-535) 99.1 8.5E-11 6.2E-15 130.1 8.3 143 682-838 41-200 (387)
52 d1a5ta2 c.37.1.20 (A:1-207) de 99.0 6.6E-09 4.8E-13 105.2 19.8 165 370-592 5-197 (207)
53 d1gvnb_ c.37.1.21 (B:) Plasmid 99.0 1.5E-12 1.1E-16 137.0 -9.2 78 680-757 28-108 (273)
54 d1l8qa2 c.37.1.20 (A:77-289) C 99.0 3.9E-09 2.8E-13 107.5 16.1 163 399-603 38-209 (213)
55 d1g8pa_ c.37.1.20 (A:) ATPase 98.9 3.2E-09 2.3E-13 115.4 14.1 73 745-832 129-212 (333)
56 d1a5ta2 c.37.1.20 (A:1-207) de 98.9 4.7E-09 3.4E-13 106.3 12.0 127 683-832 23-177 (207)
57 d1e32a1 b.52.2.3 (A:21-106) Me 98.9 4.8E-09 3.5E-13 90.1 9.9 77 78-192 2-78 (86)
58 d1ny5a2 c.37.1.20 (A:138-384) 98.8 1.7E-09 1.3E-13 112.6 8.5 172 684-871 23-231 (247)
59 d1g41a_ c.37.1.20 (A:) HslU {H 98.8 2.8E-08 2E-12 111.6 17.8 45 684-728 49-94 (443)
60 d1um8a_ c.37.1.20 (A:) ClpX {H 98.7 2.6E-08 1.9E-12 109.1 13.2 160 395-564 66-280 (364)
61 d1g8pa_ c.37.1.20 (A:) ATPase 98.6 2.7E-07 2E-11 99.8 16.9 84 457-564 128-213 (333)
62 d2gnoa2 c.37.1.20 (A:11-208) g 98.6 2.8E-07 2E-11 92.2 14.4 118 396-556 14-141 (198)
63 d1g41a_ c.37.1.20 (A:) HslU {H 98.5 1E-07 7.5E-12 106.9 10.5 40 396-435 48-87 (443)
64 d2gnoa2 c.37.1.20 (A:11-208) g 98.4 1.7E-07 1.2E-11 93.9 7.5 114 683-820 14-137 (198)
65 d1gvnb_ c.37.1.21 (B:) Plasmid 98.2 3E-07 2.2E-11 95.5 5.3 43 393-435 28-70 (273)
66 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.2 1.7E-05 1.2E-09 81.6 17.0 36 398-433 30-65 (283)
67 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.2 3.5E-06 2.5E-10 81.5 10.8 30 399-428 2-31 (178)
68 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.0 1.5E-05 1.1E-09 81.9 13.2 168 684-868 29-251 (283)
69 d1ny5a2 c.37.1.20 (A:138-384) 98.0 1E-05 7.3E-10 83.5 10.3 138 398-567 24-189 (247)
70 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 2.1E-05 1.5E-09 75.8 10.6 26 686-711 2-27 (178)
71 d1cz5a1 b.52.2.3 (A:1-91) N-te 97.8 2.9E-05 2.1E-09 66.6 8.7 74 82-192 8-83 (91)
72 d1v43a3 c.37.1.12 (A:7-245) Hy 97.7 2.1E-06 1.5E-10 87.7 0.3 37 394-430 29-65 (239)
73 d2awna2 c.37.1.12 (A:4-235) Ma 97.7 3.5E-06 2.6E-10 85.7 0.8 37 393-429 22-58 (232)
74 d1l2ta_ c.37.1.12 (A:) MJ0796 97.7 3.6E-06 2.6E-10 85.6 0.8 38 393-430 27-64 (230)
75 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 1.5E-05 1.1E-09 74.9 4.7 31 398-428 3-33 (169)
76 d1lw7a2 c.37.1.1 (A:220-411) T 97.5 2.6E-05 1.9E-09 75.0 4.5 34 397-430 7-40 (192)
77 d3dhwc1 c.37.1.12 (C:1-240) Me 97.5 9.2E-06 6.7E-10 83.0 0.3 37 394-430 28-64 (240)
78 d3d31a2 c.37.1.12 (A:1-229) Su 97.4 7.5E-06 5.5E-10 83.0 -0.8 37 394-430 23-59 (229)
79 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 3.3E-05 2.4E-09 73.6 3.7 29 399-427 6-34 (173)
80 d1viaa_ c.37.1.2 (A:) Shikimat 97.4 3.8E-05 2.8E-09 73.4 3.8 31 398-428 1-31 (161)
81 d1g2912 c.37.1.12 (1:1-240) Ma 97.4 6.4E-06 4.6E-10 84.2 -2.2 36 394-429 26-61 (240)
82 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.4 3.4E-05 2.5E-09 73.8 3.1 35 397-431 4-38 (176)
83 d1kaga_ c.37.1.2 (A:) Shikimat 97.4 3.9E-05 2.9E-09 71.9 3.5 32 685-716 3-34 (169)
84 d2onka1 c.37.1.12 (A:1-240) Mo 97.4 8.8E-06 6.4E-10 83.0 -1.2 30 400-429 27-56 (240)
85 d1lw7a2 c.37.1.1 (A:220-411) T 97.4 2.3E-05 1.7E-09 75.3 1.8 40 684-723 7-46 (192)
86 d1e6ca_ c.37.1.2 (A:) Shikimat 97.3 5.4E-05 3.9E-09 72.8 4.1 31 398-428 3-33 (170)
87 d1b0ua_ c.37.1.12 (A:) ATP-bin 97.2 1.7E-05 1.2E-09 82.1 -0.9 64 536-602 138-214 (258)
88 d1qhxa_ c.37.1.3 (A:) Chloramp 97.2 0.00013 9.2E-09 69.5 5.2 33 398-430 4-36 (178)
89 d2iyva1 c.37.1.2 (A:2-166) Shi 97.2 8.2E-05 5.9E-09 71.1 3.8 29 400-428 4-32 (165)
90 d1rkba_ c.37.1.1 (A:) Adenylat 97.1 8.4E-05 6.1E-09 70.6 3.3 32 685-716 5-36 (173)
91 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.1 0.00015 1.1E-08 69.3 4.8 24 398-421 2-25 (189)
92 d2a5yb3 c.37.1.20 (B:109-385) 97.1 0.0026 1.9E-07 65.8 14.9 44 546-592 178-221 (277)
93 d1y63a_ c.37.1.1 (A:) Probable 97.1 0.00016 1.2E-08 68.7 4.9 28 396-423 4-31 (174)
94 d1oxxk2 c.37.1.12 (K:1-242) Gl 97.1 2.1E-05 1.5E-09 80.3 -1.8 37 394-430 28-64 (242)
95 d1knqa_ c.37.1.17 (A:) Glucona 97.1 0.00013 9.4E-09 69.4 4.0 31 398-428 7-37 (171)
96 d1viaa_ c.37.1.2 (A:) Shikimat 97.1 0.00011 7.8E-09 70.1 3.3 32 685-716 1-32 (161)
97 d2bdta1 c.37.1.25 (A:1-176) Hy 97.1 0.00014 1E-08 68.7 4.0 28 399-426 4-31 (176)
98 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.0 8.6E-05 6.3E-09 70.8 2.2 37 684-720 4-40 (176)
99 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.0 0.00025 1.8E-08 69.2 5.2 31 397-427 3-33 (190)
100 d1e6ca_ c.37.1.2 (A:) Shikimat 97.0 0.00015 1.1E-08 69.5 3.5 32 685-716 3-34 (170)
101 d1m8pa3 c.37.1.15 (A:391-573) 97.0 0.00019 1.4E-08 68.3 4.1 28 396-423 5-32 (183)
102 d1zina1 c.37.1.1 (A:1-125,A:16 96.9 0.00026 1.9E-08 68.1 4.8 29 399-427 2-30 (182)
103 d2iyva1 c.37.1.2 (A:2-166) Shi 96.9 0.0002 1.5E-08 68.2 3.4 31 686-716 3-33 (165)
104 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00033 2.4E-08 68.4 4.8 30 397-426 6-35 (194)
105 d1zaka1 c.37.1.1 (A:3-127,A:15 96.8 0.00024 1.8E-08 69.2 3.6 29 398-426 4-32 (189)
106 d1ukza_ c.37.1.1 (A:) Uridylat 96.8 0.00041 3E-08 67.8 5.1 30 398-427 9-38 (196)
107 d2cdna1 c.37.1.1 (A:1-181) Ade 96.8 0.00031 2.3E-08 67.8 4.0 29 399-427 2-30 (181)
108 d1qhxa_ c.37.1.3 (A:) Chloramp 96.8 0.00036 2.7E-08 66.1 3.9 34 684-717 3-36 (178)
109 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.7 0.00047 3.4E-08 66.6 4.6 29 399-427 2-30 (182)
110 d1zaka1 c.37.1.1 (A:3-127,A:15 96.7 0.00021 1.5E-08 69.7 1.9 38 684-723 3-40 (189)
111 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.7 0.00035 2.6E-08 68.0 3.5 37 683-721 2-38 (190)
112 d1knqa_ c.37.1.17 (A:) Glucona 96.7 0.00036 2.6E-08 66.1 3.4 33 684-716 6-38 (171)
113 d1y63a_ c.37.1.1 (A:) Probable 96.7 0.00043 3.2E-08 65.6 3.8 28 683-710 4-31 (174)
114 d1akya1 c.37.1.1 (A:3-130,A:16 96.7 0.00055 4E-08 66.1 4.6 29 399-427 4-32 (180)
115 d1x6va3 c.37.1.4 (A:34-228) Ad 96.7 0.00023 1.7E-08 69.0 1.7 27 397-423 19-45 (195)
116 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.6 0.00055 4E-08 66.9 4.4 34 399-434 8-41 (189)
117 d2bdta1 c.37.1.25 (A:1-176) Hy 96.6 0.00042 3E-08 65.3 3.4 28 686-713 4-31 (176)
118 d1teva_ c.37.1.1 (A:) UMP/CMP 96.6 0.00067 4.9E-08 66.0 4.9 28 399-426 3-30 (194)
119 d1zina1 c.37.1.1 (A:1-125,A:16 96.6 0.00039 2.8E-08 66.8 3.0 35 686-722 2-36 (182)
120 d1tf7a2 c.37.1.11 (A:256-497) 96.6 0.0024 1.8E-07 64.0 9.3 81 677-757 19-130 (242)
121 d3adka_ c.37.1.1 (A:) Adenylat 96.6 0.00064 4.6E-08 66.4 4.6 36 397-434 8-43 (194)
122 d2pmka1 c.37.1.12 (A:467-707) 96.6 0.0026 1.9E-07 64.4 9.2 31 679-709 24-54 (241)
123 d1e4va1 c.37.1.1 (A:1-121,A:15 96.6 0.00068 5E-08 65.2 4.5 29 399-427 2-30 (179)
124 d2cdna1 c.37.1.1 (A:1-181) Ade 96.5 0.00049 3.6E-08 66.4 3.1 30 686-715 2-31 (181)
125 d1ckea_ c.37.1.1 (A:) CMP kina 96.5 0.00077 5.6E-08 66.6 4.6 28 399-426 5-32 (225)
126 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.00052 3.8E-08 66.9 3.0 32 683-714 5-36 (194)
127 d1tf7a2 c.37.1.11 (A:256-497) 96.5 0.0065 4.8E-07 60.7 11.6 77 394-470 23-130 (242)
128 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.4 0.00053 3.9E-08 65.2 2.7 24 685-708 2-25 (189)
129 d1yj5a2 c.37.1.1 (A:351-522) 5 96.4 0.0013 9.5E-08 63.2 5.5 31 395-425 12-42 (172)
130 d3b60a1 c.37.1.12 (A:329-581) 96.4 0.003 2.2E-07 64.5 8.5 31 678-708 35-65 (253)
131 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.4 0.00076 5.5E-08 65.9 3.6 36 684-721 6-41 (189)
132 d3adka_ c.37.1.1 (A:) Adenylat 96.4 0.00059 4.3E-08 66.7 2.6 40 682-723 6-45 (194)
133 d2hyda1 c.37.1.12 (A:324-578) 96.4 0.0026 1.9E-07 65.0 7.7 31 679-709 39-69 (255)
134 d1ly1a_ c.37.1.1 (A:) Polynucl 96.4 0.00081 5.9E-08 62.3 3.5 32 399-431 4-35 (152)
135 d1akya1 c.37.1.1 (A:3-130,A:16 96.3 0.00078 5.7E-08 65.0 3.2 31 685-715 3-33 (180)
136 d1m8pa3 c.37.1.15 (A:391-573) 96.3 0.00032 2.3E-08 66.6 0.4 27 684-710 6-32 (183)
137 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.3 0.00081 5.9E-08 64.9 3.2 30 686-715 2-31 (182)
138 d1q3ta_ c.37.1.1 (A:) CMP kina 96.3 0.0012 8.9E-08 65.4 4.5 27 400-426 6-32 (223)
139 d1ukza_ c.37.1.1 (A:) Uridylat 96.3 0.00091 6.6E-08 65.3 3.5 31 685-715 9-39 (196)
140 d1bifa1 c.37.1.7 (A:37-249) 6- 96.2 0.0028 2E-07 61.8 6.9 33 399-431 4-39 (213)
141 d1ckea_ c.37.1.1 (A:) CMP kina 96.2 0.001 7.4E-08 65.7 3.5 34 686-721 5-38 (225)
142 d1jj7a_ c.37.1.12 (A:) Peptide 96.2 0.004 2.9E-07 63.4 8.1 30 679-708 35-64 (251)
143 d2qy9a2 c.37.1.10 (A:285-495) 96.2 0.0064 4.7E-07 60.1 9.3 72 395-466 7-101 (211)
144 d1teva_ c.37.1.1 (A:) UMP/CMP 96.2 0.001 7.4E-08 64.7 3.2 35 685-721 2-36 (194)
145 d1xp8a1 c.37.1.11 (A:15-282) R 96.2 0.0044 3.2E-07 63.7 8.2 118 679-797 52-192 (268)
146 d1u94a1 c.37.1.11 (A:6-268) Re 96.1 0.0041 3E-07 63.8 7.7 116 679-795 49-187 (263)
147 d1sgwa_ c.37.1.12 (A:) Putativ 96.1 0.00075 5.4E-08 66.7 1.9 39 392-430 22-60 (200)
148 d1np6a_ c.37.1.10 (A:) Molybdo 96.1 0.0021 1.6E-07 60.2 5.1 31 399-429 4-37 (170)
149 d1e4va1 c.37.1.1 (A:1-121,A:15 96.1 0.0011 8.1E-08 63.6 3.0 30 686-715 2-31 (179)
150 d1cz5a2 d.31.1.1 (A:92-185) C- 96.1 0.0026 1.9E-07 54.5 5.0 60 273-350 24-83 (94)
151 d1yj5a2 c.37.1.1 (A:351-522) 5 96.0 0.0027 2E-07 60.9 5.3 33 683-715 13-45 (172)
152 d1r0wa_ c.37.1.12 (A:) Cystic 96.0 0.0058 4.2E-07 63.2 8.3 30 679-708 57-86 (281)
153 d1q3ta_ c.37.1.1 (A:) CMP kina 96.0 0.0014 1E-07 64.9 3.4 29 686-714 5-33 (223)
154 d1khta_ c.37.1.1 (A:) Adenylat 96.0 0.0016 1.2E-07 61.8 3.6 26 398-423 2-27 (190)
155 d1l2ta_ c.37.1.12 (A:) MJ0796 95.9 0.01 7.5E-07 59.4 9.3 31 678-708 25-55 (230)
156 d1j8yf2 c.37.1.10 (F:87-297) G 95.9 0.0098 7.2E-07 58.7 9.0 37 395-431 10-49 (211)
157 d1ly1a_ c.37.1.1 (A:) Polynucl 95.9 0.0014 1E-07 60.7 2.5 34 686-720 4-37 (152)
158 d1x6va3 c.37.1.4 (A:34-228) Ad 95.8 0.00047 3.4E-08 66.7 -1.4 28 684-711 19-46 (195)
159 d1szpa2 c.37.1.11 (A:145-395) 95.7 0.0077 5.6E-07 59.7 7.7 83 676-758 26-144 (251)
160 d1r0wa_ c.37.1.12 (A:) Cystic 95.7 0.0017 1.2E-07 67.4 2.6 46 385-430 50-95 (281)
161 d1mo6a1 c.37.1.11 (A:1-269) Re 95.6 0.008 5.8E-07 61.7 7.4 118 679-798 55-195 (269)
162 d1tf7a1 c.37.1.11 (A:14-255) C 95.6 0.0079 5.8E-07 59.2 7.2 82 677-758 19-140 (242)
163 d1u94a1 c.37.1.11 (A:6-268) Re 95.6 0.02 1.5E-06 58.4 10.2 77 394-470 51-146 (263)
164 d1g6oa_ c.37.1.11 (A:) Hexamer 95.6 0.0022 1.6E-07 68.0 2.8 73 680-752 162-244 (323)
165 d1a1va1 c.37.1.14 (A:190-325) 95.6 0.016 1.1E-06 52.5 8.4 34 684-717 8-41 (136)
166 d1mv5a_ c.37.1.12 (A:) Multidr 95.6 0.0033 2.4E-07 63.8 3.9 31 678-708 22-52 (242)
167 d3b60a1 c.37.1.12 (A:329-581) 95.5 0.0023 1.6E-07 65.4 2.5 38 391-428 35-72 (253)
168 d1vmaa2 c.37.1.10 (A:82-294) G 95.5 0.018 1.3E-06 56.9 9.0 37 395-431 9-48 (213)
169 d1g6oa_ c.37.1.11 (A:) Hexamer 95.5 0.0023 1.7E-07 67.8 2.5 70 397-466 166-245 (323)
170 d2pmka1 c.37.1.12 (A:467-707) 95.4 0.0022 1.6E-07 65.0 2.0 38 391-428 23-60 (241)
171 d1jj7a_ c.37.1.12 (A:) Peptide 95.4 0.0026 1.9E-07 64.9 2.5 38 392-429 35-72 (251)
172 d1vpla_ c.37.1.12 (A:) Putativ 95.4 0.0035 2.6E-07 63.3 3.5 39 392-430 23-61 (238)
173 d1cr2a_ c.37.1.11 (A:) Gene 4 95.4 0.041 3E-06 55.9 11.9 38 679-716 30-71 (277)
174 d1okkd2 c.37.1.10 (D:97-303) G 95.4 0.016 1.2E-06 56.9 8.3 35 397-431 6-43 (207)
175 d1ji0a_ c.37.1.12 (A:) Branche 95.3 0.0072 5.2E-07 61.1 5.6 30 679-708 27-56 (240)
176 d1ji0a_ c.37.1.12 (A:) Branche 95.3 0.0032 2.3E-07 63.8 2.9 38 393-430 28-65 (240)
177 d1nksa_ c.37.1.1 (A:) Adenylat 95.3 0.0034 2.5E-07 59.8 2.9 24 400-423 4-27 (194)
178 d1m7ga_ c.37.1.4 (A:) Adenosin 95.3 0.0068 4.9E-07 59.9 5.2 37 396-432 23-63 (208)
179 d1xp8a1 c.37.1.11 (A:15-282) R 95.3 0.034 2.5E-06 56.8 10.7 77 395-471 55-150 (268)
180 d1gkya_ c.37.1.1 (A:) Guanylat 95.3 0.0055 4E-07 59.2 4.3 29 398-426 2-30 (186)
181 d1cr2a_ c.37.1.11 (A:) Gene 4 95.3 0.038 2.8E-06 56.1 11.1 35 397-431 35-73 (277)
182 d1lvga_ c.37.1.1 (A:) Guanylat 95.2 0.006 4.4E-07 59.2 4.5 29 399-427 2-30 (190)
183 d1wf3a1 c.37.1.8 (A:3-180) GTP 95.2 0.022 1.6E-06 54.0 8.6 22 399-420 7-28 (178)
184 d1bifa1 c.37.1.7 (A:37-249) 6- 95.2 0.0076 5.5E-07 58.5 5.3 25 685-709 3-27 (213)
185 d2qy9a2 c.37.1.10 (A:285-495) 95.2 0.015 1.1E-06 57.4 7.3 71 683-753 8-101 (211)
186 d1okkd2 c.37.1.10 (D:97-303) G 95.2 0.016 1.2E-06 57.0 7.7 25 684-708 6-30 (207)
187 d1g6ha_ c.37.1.12 (A:) MJ1267 95.2 0.004 2.9E-07 63.5 3.1 37 394-430 27-63 (254)
188 d1a1va1 c.37.1.14 (A:190-325) 95.1 0.03 2.2E-06 50.5 8.9 34 398-431 9-42 (136)
189 d3d31a2 c.37.1.12 (A:1-229) Su 95.1 0.0097 7.1E-07 59.5 5.7 30 679-708 21-50 (229)
190 d1p9ra_ c.37.1.11 (A:) Extrace 95.1 0.019 1.4E-06 62.3 8.5 67 400-466 161-237 (401)
191 d1ls1a2 c.37.1.10 (A:89-295) G 95.0 0.026 1.9E-06 55.4 8.5 34 398-431 11-47 (207)
192 d1w36d1 c.37.1.19 (D:2-360) Ex 95.0 0.033 2.4E-06 59.4 10.1 20 400-419 166-185 (359)
193 d1rz3a_ c.37.1.6 (A:) Hypothet 95.0 0.0044 3.2E-07 59.4 2.7 32 398-429 23-57 (198)
194 d1mv5a_ c.37.1.12 (A:) Multidr 95.0 0.0023 1.7E-07 65.0 0.5 36 392-427 23-58 (242)
195 d1tf7a1 c.37.1.11 (A:14-255) C 95.0 0.021 1.5E-06 56.0 7.9 77 394-470 23-139 (242)
196 d1yksa1 c.37.1.14 (A:185-324) 94.9 0.0082 5.9E-07 53.9 4.2 22 681-702 4-25 (140)
197 d1wb9a2 c.37.1.12 (A:567-800) 94.9 0.057 4.1E-06 53.9 10.9 67 398-466 42-130 (234)
198 d1vpla_ c.37.1.12 (A:) Putativ 94.9 0.011 7.7E-07 59.7 5.3 31 679-709 23-53 (238)
199 d1j8yf2 c.37.1.10 (F:87-297) G 94.9 0.015 1.1E-06 57.4 6.2 27 682-708 10-36 (211)
200 d1mo6a1 c.37.1.11 (A:1-269) Re 94.8 0.045 3.2E-06 55.9 10.0 79 393-471 56-153 (269)
201 d2gj8a1 c.37.1.8 (A:216-376) P 94.8 0.037 2.7E-06 51.0 8.6 22 399-420 3-24 (161)
202 d2hyda1 c.37.1.12 (A:324-578) 94.8 0.0032 2.3E-07 64.3 0.9 37 392-428 39-75 (255)
203 d1htwa_ c.37.1.18 (A:) Hypothe 94.7 0.014 1E-06 54.9 5.3 27 398-424 34-60 (158)
204 d1khta_ c.37.1.1 (A:) Adenylat 94.6 0.0052 3.8E-07 58.1 2.1 26 685-710 2-27 (190)
205 d1xjca_ c.37.1.10 (A:) Molybdo 94.6 0.014 1.1E-06 54.7 5.3 31 400-430 4-37 (165)
206 d1ls1a2 c.37.1.10 (A:89-295) G 94.6 0.037 2.7E-06 54.3 8.3 33 684-716 10-45 (207)
207 d1wb9a2 c.37.1.12 (A:567-800) 94.5 0.044 3.2E-06 54.8 8.8 105 685-803 42-168 (234)
208 d1p9ra_ c.37.1.11 (A:) Extrace 94.4 0.024 1.8E-06 61.5 7.3 72 683-754 157-238 (401)
209 d1znwa1 c.37.1.1 (A:20-201) Gu 94.4 0.012 8.4E-07 56.4 4.1 26 397-422 2-27 (182)
210 d1l7vc_ c.37.1.12 (C:) ABC tra 94.3 0.0064 4.6E-07 61.1 2.0 35 387-421 15-49 (231)
211 d1m7ga_ c.37.1.4 (A:) Adenosin 94.2 0.0091 6.6E-07 58.9 2.9 38 683-720 23-64 (208)
212 d1n0wa_ c.37.1.11 (A:) DNA rep 94.1 0.0098 7.1E-07 57.3 2.8 32 677-708 16-47 (242)
213 d1uj2a_ c.37.1.6 (A:) Uridine- 94.1 0.014 9.8E-07 57.3 3.9 25 399-423 4-28 (213)
214 d1lvga_ c.37.1.1 (A:) Guanylat 94.1 0.015 1.1E-06 56.2 4.1 30 686-715 2-31 (190)
215 d1w36d1 c.37.1.19 (D:2-360) Ex 94.1 0.023 1.7E-06 60.7 5.9 20 685-704 164-183 (359)
216 d1n0wa_ c.37.1.11 (A:) DNA rep 94.0 0.013 9.8E-07 56.2 3.7 28 394-421 20-47 (242)
217 d1np6a_ c.37.1.10 (A:) Molybdo 94.0 0.0096 7E-07 55.5 2.5 31 686-716 4-37 (170)
218 d1gkya_ c.37.1.1 (A:) Guanylat 93.9 0.015 1.1E-06 55.9 3.8 29 685-713 2-30 (186)
219 d1vmaa2 c.37.1.10 (A:82-294) G 93.9 0.036 2.6E-06 54.6 6.6 27 682-708 9-35 (213)
220 d1mkya1 c.37.1.8 (A:2-172) Pro 93.9 0.11 8.2E-06 48.3 9.9 22 399-420 2-23 (171)
221 d2a5yb3 c.37.1.20 (B:109-385) 93.8 0.027 1.9E-06 57.8 5.6 23 685-707 45-67 (277)
222 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.7 0.088 6.4E-06 47.9 8.6 22 686-707 2-23 (160)
223 d1szpa2 c.37.1.11 (A:145-395) 93.6 0.012 8.8E-07 58.2 2.4 27 394-420 31-57 (251)
224 d1e32a1 b.52.2.3 (A:21-106) Me 93.5 0.038 2.8E-06 46.2 5.0 47 171-220 14-60 (86)
225 d1nksa_ c.37.1.1 (A:) Adenylat 93.5 0.0083 6E-07 57.0 0.8 25 687-711 4-28 (194)
226 d1v5wa_ c.37.1.11 (A:) Meiotic 93.4 0.016 1.2E-06 57.6 3.1 33 676-708 29-61 (258)
227 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.3 0.021 1.5E-06 52.3 3.5 22 400-421 3-24 (160)
228 d1uf9a_ c.37.1.1 (A:) Dephosph 93.3 0.03 2.2E-06 53.7 4.7 28 399-427 5-32 (191)
229 d1tuea_ c.37.1.20 (A:) Replica 93.2 0.014 1E-06 56.8 2.0 36 680-715 49-84 (205)
230 d2gj8a1 c.37.1.8 (A:216-376) P 93.2 0.096 7E-06 48.1 8.0 22 686-707 3-24 (161)
231 d1xjca_ c.37.1.10 (A:) Molybdo 93.2 0.05 3.7E-06 50.7 6.0 30 687-716 4-36 (165)
232 d1v5wa_ c.37.1.11 (A:) Meiotic 93.1 0.026 1.9E-06 56.0 4.1 29 393-421 33-61 (258)
233 d1kgda_ c.37.1.1 (A:) Guanylat 93.1 0.027 2E-06 53.8 4.1 26 397-422 3-28 (178)
234 d1ewqa2 c.37.1.12 (A:542-765) 93.0 0.074 5.4E-06 52.7 7.3 66 399-466 37-124 (224)
235 d1h65a_ c.37.1.8 (A:) Chloropl 93.0 0.1 7.4E-06 52.7 8.5 43 374-420 13-55 (257)
236 d1pzna2 c.37.1.11 (A:96-349) D 92.9 0.017 1.2E-06 57.6 2.2 33 676-708 28-60 (254)
237 d1pzna2 c.37.1.11 (A:96-349) D 92.9 0.022 1.6E-06 56.6 3.2 28 394-421 33-60 (254)
238 d1nlfa_ c.37.1.11 (A:) Hexamer 92.9 0.12 8.7E-06 52.0 8.9 28 680-707 25-52 (274)
239 d1rz3a_ c.37.1.6 (A:) Hypothet 92.8 0.011 8.2E-07 56.4 0.7 25 686-710 24-48 (198)
240 d1yrba1 c.37.1.10 (A:1-244) AT 92.8 0.04 2.9E-06 54.3 5.0 30 400-429 3-34 (244)
241 d1sq5a_ c.37.1.6 (A:) Pantothe 92.8 0.073 5.3E-06 55.3 7.1 39 395-433 78-121 (308)
242 d1kkma_ c.91.1.2 (A:) HPr kina 92.6 0.039 2.8E-06 52.6 4.2 32 395-427 12-43 (176)
243 d1wf3a1 c.37.1.8 (A:3-180) GTP 92.5 0.15 1.1E-05 47.8 8.5 22 686-707 7-28 (178)
244 g1f2t.1 c.37.1.12 (A:,B:) Rad5 92.4 0.037 2.7E-06 56.0 4.2 21 401-421 27-47 (292)
245 d1gkub1 c.37.1.16 (B:1-250) He 92.3 0.11 8.2E-06 51.3 7.6 35 683-717 57-94 (237)
246 d2qtvb1 c.37.1.8 (B:24-189) SA 92.2 0.035 2.6E-06 50.7 3.3 21 400-420 3-23 (166)
247 d1tuea_ c.37.1.20 (A:) Replica 92.2 0.036 2.6E-06 53.8 3.4 32 395-426 51-82 (205)
248 d1vhta_ c.37.1.1 (A:) Dephosph 92.2 0.043 3.2E-06 53.6 4.1 27 400-427 6-32 (208)
249 d1sgwa_ c.37.1.12 (A:) Putativ 92.1 0.016 1.2E-06 56.7 0.8 31 679-709 22-52 (200)
250 d2fh5b1 c.37.1.8 (B:63-269) Si 92.1 0.037 2.7E-06 53.6 3.5 23 398-420 1-23 (207)
251 d1ewqa2 c.37.1.12 (A:542-765) 92.0 0.12 9E-06 51.0 7.4 21 686-706 37-57 (224)
252 d1upta_ c.37.1.8 (A:) ADP-ribo 92.0 0.037 2.7E-06 50.9 3.3 22 399-420 7-28 (169)
253 d1nrjb_ c.37.1.8 (B:) Signal r 92.0 0.16 1.1E-05 48.6 8.1 23 685-707 4-26 (209)
254 d1zj6a1 c.37.1.8 (A:2-178) ADP 92.0 0.036 2.6E-06 51.9 3.1 22 399-420 17-38 (177)
255 d1jjva_ c.37.1.1 (A:) Dephosph 91.9 0.035 2.6E-06 54.1 3.0 27 400-427 5-31 (205)
256 d2p67a1 c.37.1.10 (A:1-327) LA 91.8 0.073 5.3E-06 55.9 5.6 34 398-431 55-93 (327)
257 d1ksha_ c.37.1.8 (A:) ADP-ribo 91.8 0.054 3.9E-06 50.2 4.1 23 685-707 3-25 (165)
258 d1znwa1 c.37.1.1 (A:20-201) Gu 91.6 0.041 3E-06 52.3 3.1 25 685-709 3-27 (182)
259 d1s96a_ c.37.1.1 (A:) Guanylat 91.5 0.053 3.9E-06 53.0 3.9 25 398-422 3-27 (205)
260 d1odfa_ c.37.1.6 (A:) Hypothet 91.5 0.072 5.3E-06 54.7 5.0 37 397-433 27-69 (286)
261 d1ko7a2 c.91.1.2 (A:130-298) H 91.4 0.058 4.2E-06 51.1 3.9 31 395-426 13-43 (169)
262 d1knxa2 c.91.1.2 (A:133-309) H 91.3 0.05 3.6E-06 51.9 3.3 31 396-427 14-44 (177)
263 d1deka_ c.37.1.1 (A:) Deoxynuc 91.3 0.044 3.2E-06 54.4 3.1 30 400-431 4-33 (241)
264 d2awna2 c.37.1.12 (A:4-235) Ma 91.2 0.028 2E-06 56.2 1.4 42 679-720 21-64 (232)
265 d2i1qa2 c.37.1.11 (A:65-322) D 91.2 0.048 3.5E-06 53.5 3.2 28 394-421 31-58 (258)
266 d1nn5a_ c.37.1.1 (A:) Thymidyl 91.1 0.11 7.6E-06 50.8 5.6 32 400-431 6-40 (209)
267 d2i1qa2 c.37.1.11 (A:65-322) D 91.1 0.035 2.6E-06 54.6 2.0 32 677-708 27-58 (258)
268 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.0 0.038 2.8E-06 51.7 2.2 23 398-420 14-36 (186)
269 d2qm8a1 c.37.1.10 (A:5-327) Me 91.0 0.16 1.2E-05 53.1 7.3 34 398-431 52-90 (323)
270 d1nrjb_ c.37.1.8 (B:) Signal r 90.9 0.058 4.2E-06 51.9 3.5 22 399-420 5-26 (209)
271 d1zj6a1 c.37.1.8 (A:2-178) ADP 90.9 0.19 1.4E-05 46.6 7.1 24 684-707 15-38 (177)
272 d1gsia_ c.37.1.1 (A:) Thymidyl 90.9 0.1 7.3E-06 50.2 5.2 32 400-431 3-37 (208)
273 d1zd9a1 c.37.1.8 (A:18-181) AD 90.9 0.24 1.8E-05 45.6 7.8 22 686-707 4-25 (164)
274 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.8 0.043 3.1E-06 51.0 2.2 22 399-420 4-25 (165)
275 d1uj2a_ c.37.1.6 (A:) Uridine- 90.7 0.047 3.4E-06 53.2 2.6 26 686-711 4-29 (213)
276 d2vp4a1 c.37.1.1 (A:12-208) De 90.7 0.046 3.3E-06 52.4 2.4 29 397-425 9-37 (197)
277 d1upta_ c.37.1.8 (A:) ADP-ribo 90.6 0.13 9.8E-06 46.9 5.6 24 684-707 5-28 (169)
278 d2fz4a1 c.37.1.19 (A:24-229) D 90.5 0.1 7.6E-06 50.6 5.0 33 685-717 86-118 (206)
279 d2onka1 c.37.1.12 (A:1-240) Mo 90.5 0.06 4.3E-06 53.9 3.2 36 685-720 25-62 (240)
280 d1g2912 c.37.1.12 (1:1-240) Ma 90.5 0.032 2.3E-06 56.0 1.0 41 679-719 24-66 (240)
281 d2cxxa1 c.37.1.8 (A:2-185) GTP 90.5 0.047 3.4E-06 51.5 2.3 22 399-420 2-23 (184)
282 d2a5ja1 c.37.1.8 (A:9-181) Rab 90.3 0.07 5.1E-06 50.0 3.3 21 400-420 6-26 (173)
283 d2p6ra3 c.37.1.19 (A:1-202) He 90.2 0.6 4.4E-05 44.5 10.4 19 397-415 40-58 (202)
284 d1mkya1 c.37.1.8 (A:2-172) Pro 90.2 0.33 2.4E-05 44.9 8.2 21 686-706 2-22 (171)
285 d2fh5b1 c.37.1.8 (B:63-269) Si 90.1 0.2 1.4E-05 48.1 6.7 23 685-707 1-23 (207)
286 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.1 0.22 1.6E-05 46.3 6.8 23 684-706 16-38 (176)
287 d1v43a3 c.37.1.12 (A:7-245) Hy 90.1 0.051 3.7E-06 54.4 2.2 42 679-720 27-70 (239)
288 d1z2aa1 c.37.1.8 (A:8-171) Rab 89.9 0.077 5.6E-06 49.2 3.3 21 399-419 4-24 (164)
289 d1kgda_ c.37.1.1 (A:) Guanylat 89.9 0.074 5.4E-06 50.6 3.1 29 685-713 4-32 (178)
290 g1ii8.1 c.37.1.12 (A:,B:) Rad5 89.9 0.069 5E-06 54.8 3.2 22 400-421 26-47 (369)
291 d1htwa_ c.37.1.18 (A:) Hypothe 89.8 0.08 5.9E-06 49.4 3.2 37 682-719 31-67 (158)
292 d1qhla_ c.37.1.12 (A:) Cell di 89.7 0.027 2E-06 53.3 -0.3 23 400-422 27-49 (222)
293 d3raba_ c.37.1.8 (A:) Rab3a {R 89.6 0.085 6.2E-06 49.2 3.3 21 400-420 8-28 (169)
294 d1zd9a1 c.37.1.8 (A:18-181) AD 89.6 0.086 6.2E-06 48.9 3.3 22 399-420 4-25 (164)
295 d1u0ja_ c.37.1.20 (A:) Rep 40 89.6 0.11 7.9E-06 52.9 4.3 59 680-753 100-158 (267)
296 d1u0la2 c.37.1.8 (A:69-293) Pr 89.6 0.062 4.5E-06 53.2 2.3 33 398-430 96-128 (225)
297 d3dhwc1 c.37.1.12 (C:1-240) Me 89.5 0.036 2.6E-06 55.6 0.5 43 678-720 25-69 (240)
298 d1kaoa_ c.37.1.8 (A:) Rap2a {H 89.5 0.089 6.5E-06 48.8 3.3 22 399-420 5-26 (167)
299 d1svia_ c.37.1.8 (A:) Probable 89.3 0.098 7.2E-06 49.9 3.6 21 399-419 25-45 (195)
300 d4tmka_ c.37.1.1 (A:) Thymidyl 89.3 0.1 7.4E-06 50.6 3.7 23 399-421 4-26 (210)
301 d1kkma_ c.91.1.2 (A:) HPr kina 89.3 0.084 6.1E-06 50.2 2.9 32 684-716 14-45 (176)
302 d1pjra1 c.37.1.19 (A:1-318) DE 89.3 0.087 6.3E-06 54.3 3.4 23 399-421 26-49 (318)
303 d1z0fa1 c.37.1.8 (A:8-173) Rab 89.2 0.096 7E-06 48.6 3.3 21 400-420 7-27 (166)
304 g1xew.1 c.37.1.12 (X:,Y:) Smc 89.0 0.071 5.2E-06 55.2 2.4 23 400-422 29-51 (329)
305 d2ew1a1 c.37.1.8 (A:4-174) Rab 88.9 0.093 6.7E-06 49.0 3.0 21 400-420 8-28 (171)
306 d2atva1 c.37.1.8 (A:5-172) Ras 88.9 0.1 7.5E-06 48.6 3.3 21 400-420 5-25 (168)
307 d1tmka_ c.37.1.1 (A:) Thymidyl 88.9 0.19 1.4E-05 48.9 5.5 34 398-431 4-37 (214)
308 d2f9la1 c.37.1.8 (A:8-182) Rab 88.9 0.1 7.5E-06 48.9 3.3 21 400-420 7-27 (175)
309 d2f7sa1 c.37.1.8 (A:5-190) Rab 88.9 0.099 7.2E-06 49.5 3.2 20 400-419 8-27 (186)
310 d2erya1 c.37.1.8 (A:10-180) r- 88.9 0.096 7E-06 48.9 3.0 22 399-420 7-28 (171)
311 d1oxxk2 c.37.1.12 (K:1-242) Gl 88.8 0.033 2.4E-06 55.9 -0.4 31 679-709 26-56 (242)
312 d1ky3a_ c.37.1.8 (A:) Rab-rela 88.7 0.11 7.9E-06 48.5 3.3 21 400-420 5-25 (175)
313 d1b0ua_ c.37.1.12 (A:) ATP-bin 88.7 0.05 3.7E-06 55.1 0.9 42 679-720 23-66 (258)
314 d1z08a1 c.37.1.8 (A:17-183) Ra 88.6 0.11 8.2E-06 48.2 3.3 21 400-420 6-26 (167)
315 d2erxa1 c.37.1.8 (A:6-176) di- 88.5 0.097 7.1E-06 48.7 2.8 21 400-420 5-25 (171)
316 d1uaaa1 c.37.1.19 (A:2-307) DE 88.5 0.11 8.1E-06 52.9 3.5 21 399-419 16-37 (306)
317 d1ctqa_ c.37.1.8 (A:) cH-p21 R 88.5 0.1 7.5E-06 48.4 3.0 21 400-420 6-26 (166)
318 d1z06a1 c.37.1.8 (A:32-196) Ra 88.5 0.12 8.5E-06 47.8 3.3 21 400-420 5-25 (165)
319 d1wb1a4 c.37.1.8 (A:1-179) Elo 88.5 0.67 4.9E-05 43.3 9.0 21 399-419 7-27 (179)
320 d1g6ha_ c.37.1.12 (A:) MJ1267 88.4 0.071 5.2E-06 53.9 1.8 42 679-720 25-68 (254)
321 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 88.4 0.12 8.5E-06 48.9 3.3 21 400-420 5-25 (184)
322 d1uf9a_ c.37.1.1 (A:) Dephosph 88.4 0.11 7.8E-06 49.5 3.1 30 685-715 4-33 (191)
323 d1r2qa_ c.37.1.8 (A:) Rab5a {H 88.3 0.12 8.6E-06 48.2 3.3 22 399-420 8-29 (170)
324 d1g16a_ c.37.1.8 (A:) Rab-rela 88.2 0.11 8.1E-06 48.1 3.0 21 400-420 5-25 (166)
325 d1u0ja_ c.37.1.20 (A:) Rep 40 88.0 0.25 1.8E-05 50.1 5.7 56 396-466 103-158 (267)
326 d1a7ja_ c.37.1.6 (A:) Phosphor 88.0 0.18 1.3E-05 51.5 4.7 35 399-433 6-43 (288)
327 d1fzqa_ c.37.1.8 (A:) ADP-ribo 88.0 0.1 7.6E-06 48.6 2.6 23 398-420 17-39 (176)
328 d1xtqa1 c.37.1.8 (A:3-169) GTP 87.9 0.12 8.7E-06 47.9 3.0 22 399-420 6-27 (167)
329 d1z0ja1 c.37.1.8 (A:2-168) Rab 87.9 0.13 9.8E-06 47.6 3.3 21 400-420 7-27 (167)
330 d1yzqa1 c.37.1.8 (A:14-177) Ra 87.7 0.13 9.2E-06 47.5 3.0 21 400-420 3-23 (164)
331 d2fn4a1 c.37.1.8 (A:24-196) r- 87.6 0.13 9.3E-06 48.2 3.0 22 399-420 8-29 (173)
332 d1l7vc_ c.37.1.12 (C:) ABC tra 87.6 0.07 5.1E-06 53.1 1.1 29 679-707 20-48 (231)
333 d1nlfa_ c.37.1.11 (A:) Hexamer 87.6 0.14 9.9E-06 51.6 3.4 25 397-421 29-53 (274)
334 d1x3sa1 c.37.1.8 (A:2-178) Rab 87.5 0.14 1E-05 48.0 3.3 22 399-420 9-30 (177)
335 d2ocpa1 c.37.1.1 (A:37-277) De 87.4 0.19 1.4E-05 49.4 4.4 29 398-426 3-31 (241)
336 d2bmea1 c.37.1.8 (A:6-179) Rab 87.3 0.14 9.9E-06 47.9 3.0 21 400-420 8-28 (174)
337 d2gjsa1 c.37.1.8 (A:91-258) Ra 87.3 0.13 9.4E-06 47.9 2.8 21 400-420 4-24 (168)
338 d1e69a_ c.37.1.12 (A:) Smc hea 87.2 0.086 6.2E-06 54.0 1.6 23 400-422 27-49 (308)
339 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.2 0.35 2.6E-05 44.9 6.0 22 686-707 8-29 (174)
340 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.0 0.16 1.2E-05 47.4 3.3 21 400-420 9-29 (174)
341 d1egaa1 c.37.1.8 (A:4-182) GTP 87.0 0.13 9.6E-06 47.9 2.7 21 400-420 8-28 (179)
342 d1knxa2 c.91.1.2 (A:133-309) H 86.9 0.11 8.2E-06 49.3 2.1 32 684-716 15-46 (177)
343 d1u8za_ c.37.1.8 (A:) Ras-rela 86.9 0.16 1.2E-05 47.2 3.3 21 400-420 7-27 (168)
344 d1c1ya_ c.37.1.8 (A:) Rap1A {H 86.9 0.16 1.2E-05 47.0 3.3 22 399-420 5-26 (167)
345 d2qtvb1 c.37.1.8 (B:24-189) SA 86.9 0.12 9E-06 46.7 2.4 22 686-707 2-23 (166)
346 d2g6ba1 c.37.1.8 (A:58-227) Ra 86.8 0.16 1.2E-05 47.1 3.3 21 400-420 9-29 (170)
347 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.8 0.15 1.1E-05 47.9 2.9 23 398-420 3-25 (177)
348 d1ko7a2 c.91.1.2 (A:130-298) H 86.7 0.13 9.7E-06 48.4 2.5 30 684-714 15-44 (169)
349 d1xzpa2 c.37.1.8 (A:212-371) T 86.6 0.15 1.1E-05 46.7 2.8 22 686-707 2-23 (160)
350 d1lnza2 c.37.1.8 (A:158-342) O 86.5 0.12 9.1E-06 48.6 2.3 21 399-419 3-23 (185)
351 d1t9ha2 c.37.1.8 (A:68-298) Pr 86.5 0.055 4E-06 53.8 -0.4 33 398-430 98-130 (231)
352 d1s96a_ c.37.1.1 (A:) Guanylat 86.5 0.19 1.4E-05 48.9 3.6 25 685-709 3-27 (205)
353 d1xzpa2 c.37.1.8 (A:212-371) T 86.4 0.063 4.6E-06 49.3 -0.0 23 399-421 2-24 (160)
354 d2p67a1 c.37.1.10 (A:1-327) LA 86.2 0.36 2.6E-05 50.3 5.9 34 684-717 54-92 (327)
355 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 86.2 0.19 1.4E-05 46.7 3.3 22 399-420 5-26 (170)
356 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.1 0.1 7.4E-06 48.8 1.3 23 398-420 13-35 (173)
357 d1x1ra1 c.37.1.8 (A:10-178) Ra 86.0 0.2 1.4E-05 46.7 3.3 22 399-420 6-27 (169)
358 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.0 0.35 2.5E-05 44.9 5.2 24 684-707 12-35 (173)
359 d1moza_ c.37.1.8 (A:) ADP-ribo 85.9 0.15 1.1E-05 47.9 2.5 24 396-419 16-39 (182)
360 d2g3ya1 c.37.1.8 (A:73-244) GT 85.9 0.19 1.4E-05 46.9 3.2 20 400-419 6-25 (172)
361 d1jjva_ c.37.1.1 (A:) Dephosph 85.8 0.16 1.2E-05 49.0 2.8 29 687-716 5-33 (205)
362 d2bcgy1 c.37.1.8 (Y:3-196) GTP 85.7 0.18 1.3E-05 48.0 3.0 21 400-420 9-29 (194)
363 d1p5zb_ c.37.1.1 (B:) Deoxycyt 85.6 0.11 8.3E-06 50.9 1.5 25 399-423 4-28 (241)
364 d2fu5c1 c.37.1.8 (C:3-175) Rab 85.6 0.13 9.1E-06 48.2 1.7 20 400-419 9-28 (173)
365 d1mkya2 c.37.1.8 (A:173-358) P 85.5 0.21 1.5E-05 46.8 3.4 23 398-420 9-31 (186)
366 d1m7ba_ c.37.1.8 (A:) RhoE (RN 85.3 0.19 1.4E-05 47.3 2.9 23 398-420 3-25 (179)
367 d1udxa2 c.37.1.8 (A:157-336) O 85.2 0.15 1.1E-05 47.8 2.1 22 399-420 3-24 (180)
368 d2vp4a1 c.37.1.1 (A:12-208) De 85.1 0.12 9.1E-06 49.1 1.4 31 683-713 8-38 (197)
369 d1mh1a_ c.37.1.8 (A:) Rac {Hum 85.1 0.2 1.5E-05 47.1 3.0 22 399-420 7-28 (183)
370 d1nn5a_ c.37.1.1 (A:) Thymidyl 85.0 0.26 1.9E-05 47.8 3.9 31 686-716 5-38 (209)
371 d1vhta_ c.37.1.1 (A:) Dephosph 84.9 0.21 1.5E-05 48.4 3.0 28 687-715 6-33 (208)
372 d1odfa_ c.37.1.6 (A:) Hypothet 84.8 0.33 2.4E-05 49.6 4.6 27 682-708 25-51 (286)
373 d1yrba1 c.37.1.10 (A:1-244) AT 84.8 0.18 1.3E-05 49.3 2.6 22 687-708 3-24 (244)
374 d2atxa1 c.37.1.8 (A:9-193) Rho 84.8 0.22 1.6E-05 47.1 3.0 22 399-420 11-32 (185)
375 d1puia_ c.37.1.8 (A:) Probable 84.6 0.12 9.1E-06 48.1 1.1 22 398-419 17-38 (188)
376 d1i2ma_ c.37.1.8 (A:) Ran {Hum 84.3 0.13 9.3E-06 48.1 1.1 22 399-420 5-26 (170)
377 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 84.3 0.15 1.1E-05 47.3 1.6 25 682-706 11-35 (186)
378 d1w1wa_ c.37.1.12 (A:) Smc hea 84.2 0.24 1.7E-05 52.7 3.4 24 400-423 28-51 (427)
379 d2ngra_ c.37.1.8 (A:) CDC42 {H 84.1 0.24 1.7E-05 47.0 3.0 21 400-420 6-26 (191)
380 d1gsia_ c.37.1.1 (A:) Thymidyl 84.0 0.32 2.3E-05 46.5 3.9 32 687-718 3-37 (208)
381 d2b8ta1 c.37.1.24 (A:11-149) T 83.9 2 0.00015 38.5 9.3 32 400-431 5-39 (139)
382 d2a5ja1 c.37.1.8 (A:9-181) Rab 83.6 0.22 1.6E-05 46.5 2.4 22 686-707 5-26 (173)
383 d1xpua3 c.37.1.11 (A:129-417) 83.5 0.29 2.1E-05 50.0 3.4 62 680-752 39-104 (289)
384 d1qhla_ c.37.1.12 (A:) Cell di 83.1 0.14 1.1E-05 47.9 0.9 23 686-708 26-48 (222)
385 d1uaaa1 c.37.1.19 (A:2-307) DE 83.0 0.25 1.8E-05 50.0 2.8 18 684-701 14-31 (306)
386 d1e9ra_ c.37.1.11 (A:) Bacteri 82.7 0.44 3.2E-05 51.0 4.8 34 398-431 51-87 (433)
387 d1z2aa1 c.37.1.8 (A:8-171) Rab 82.2 0.25 1.8E-05 45.5 2.2 21 686-706 4-24 (164)
388 d2bmfa2 c.37.1.14 (A:178-482) 82.2 0.34 2.4E-05 49.1 3.4 19 681-699 6-24 (305)
389 d1deka_ c.37.1.1 (A:) Deoxynuc 82.0 0.25 1.8E-05 48.6 2.2 25 687-711 4-28 (241)
390 d1zcba2 c.37.1.8 (A:47-75,A:20 82.0 0.32 2.3E-05 46.0 2.9 20 399-418 4-23 (200)
391 g1f2t.1 c.37.1.12 (A:,B:) Rad5 81.9 0.25 1.8E-05 49.4 2.2 20 688-707 27-46 (292)
392 d1nija1 c.37.1.10 (A:2-223) Hy 81.9 0.75 5.5E-05 44.8 5.8 22 400-421 6-27 (222)
393 d1cz5a1 b.52.2.3 (A:1-91) N-te 81.9 0.78 5.7E-05 38.3 4.9 36 172-209 20-55 (91)
394 d4tmka_ c.37.1.1 (A:) Thymidyl 81.8 0.27 1.9E-05 47.4 2.3 24 685-708 3-26 (210)
395 d2qm8a1 c.37.1.10 (A:5-327) Me 81.7 0.81 5.9E-05 47.4 6.3 33 685-717 52-89 (323)
396 d1yksa1 c.37.1.14 (A:185-324) 81.5 0.24 1.7E-05 43.6 1.7 20 395-414 5-24 (140)
397 d1sq5a_ c.37.1.6 (A:) Pantothe 81.4 0.41 3E-05 49.4 3.7 39 682-720 78-121 (308)
398 d1tmka_ c.37.1.1 (A:) Thymidyl 81.4 0.45 3.3E-05 46.2 3.9 34 684-717 3-36 (214)
399 d1kaoa_ c.37.1.8 (A:) Rap2a {H 81.3 0.3 2.2E-05 45.0 2.4 22 686-707 5-26 (167)
400 d1pjra1 c.37.1.19 (A:1-318) DE 81.2 0.23 1.7E-05 50.9 1.7 18 684-701 24-41 (318)
401 d3raba_ c.37.1.8 (A:) Rab3a {R 81.1 0.3 2.2E-05 45.2 2.4 22 686-707 7-28 (169)
402 d1z0fa1 c.37.1.8 (A:8-173) Rab 80.9 0.31 2.3E-05 44.9 2.4 22 686-707 6-27 (166)
403 d2f9la1 c.37.1.8 (A:8-182) Rab 80.9 0.3 2.2E-05 45.5 2.3 21 686-706 6-26 (175)
404 d2f7sa1 c.37.1.8 (A:5-190) Rab 80.7 0.31 2.2E-05 45.8 2.3 21 686-706 7-27 (186)
405 d1oywa2 c.37.1.19 (A:1-206) Re 80.5 0.69 5E-05 44.1 4.9 31 684-714 40-70 (206)
406 d2bmja1 c.37.1.8 (A:66-240) Ce 80.5 0.45 3.2E-05 44.6 3.4 22 399-420 7-28 (175)
407 g1xew.1 c.37.1.12 (X:,Y:) Smc 80.2 0.32 2.4E-05 49.9 2.4 24 686-709 27-51 (329)
408 d1azta2 c.37.1.8 (A:35-65,A:20 80.1 0.4 2.9E-05 46.7 2.9 22 399-420 8-29 (221)
409 d1z08a1 c.37.1.8 (A:17-183) Ra 79.8 0.35 2.5E-05 44.6 2.3 21 686-706 5-25 (167)
410 d2atva1 c.37.1.8 (A:5-172) Ras 79.7 0.37 2.7E-05 44.6 2.4 22 686-707 4-25 (168)
411 d2ew1a1 c.37.1.8 (A:4-174) Rab 79.6 0.33 2.4E-05 45.0 2.0 21 686-706 7-27 (171)
412 d1ky3a_ c.37.1.8 (A:) Rab-rela 79.5 0.36 2.6E-05 44.7 2.3 21 686-706 4-24 (175)
413 d2cxxa1 c.37.1.8 (A:2-185) GTP 79.5 0.27 1.9E-05 45.9 1.3 21 686-706 2-22 (184)
414 d2ocpa1 c.37.1.1 (A:37-277) De 79.3 0.44 3.2E-05 46.6 3.0 30 684-713 2-31 (241)
415 d1r2qa_ c.37.1.8 (A:) Rab5a {H 79.1 0.38 2.8E-05 44.4 2.4 22 686-707 8-29 (170)
416 d1ihua1 c.37.1.10 (A:1-296) Ar 79.0 1.1 8E-05 44.8 6.1 37 395-431 6-45 (296)
417 g1ii8.1 c.37.1.12 (A:,B:) Rad5 78.9 0.36 2.6E-05 49.1 2.2 21 686-706 25-45 (369)
418 d1xtqa1 c.37.1.8 (A:3-169) GTP 78.9 0.28 2.1E-05 45.2 1.3 24 684-707 4-27 (167)
419 d1z06a1 c.37.1.8 (A:32-196) Ra 78.9 0.39 2.8E-05 44.0 2.3 22 686-707 4-25 (165)
420 d1g16a_ c.37.1.8 (A:) Rab-rela 78.8 0.34 2.5E-05 44.5 1.9 22 686-707 4-25 (166)
421 d1ctqa_ c.37.1.8 (A:) cH-p21 R 78.7 0.36 2.6E-05 44.4 2.0 22 686-707 5-26 (166)
422 d2erxa1 c.37.1.8 (A:6-176) di- 78.7 0.37 2.7E-05 44.5 2.1 21 686-706 4-24 (171)
423 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 78.5 0.5 3.6E-05 44.3 3.0 23 399-421 4-26 (200)
424 d1nija1 c.37.1.10 (A:2-223) Hy 78.0 1.4 0.0001 42.8 6.4 22 687-708 6-27 (222)
425 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 78.0 0.44 3.2E-05 44.6 2.4 21 686-706 4-24 (184)
426 d1gm5a3 c.37.1.19 (A:286-549) 78.0 1.6 0.00011 43.7 6.8 38 682-719 102-142 (264)
427 d1xpua3 c.37.1.11 (A:129-417) 77.8 0.67 4.9E-05 47.1 3.9 25 397-421 43-67 (289)
428 d1e69a_ c.37.1.12 (A:) Smc hea 77.8 0.42 3E-05 48.5 2.3 23 687-709 27-49 (308)
429 d2erya1 c.37.1.8 (A:10-180) r- 77.6 0.39 2.9E-05 44.4 1.9 22 685-706 6-27 (171)
430 d1p5zb_ c.37.1.1 (B:) Deoxycyt 77.4 0.31 2.3E-05 47.5 1.2 26 685-710 3-28 (241)
431 d1x3sa1 c.37.1.8 (A:2-178) Rab 77.3 0.45 3.3E-05 44.3 2.2 22 685-706 8-29 (177)
432 d1yzqa1 c.37.1.8 (A:14-177) Ra 77.2 0.41 3E-05 43.8 1.9 21 686-706 2-22 (164)
433 d2g6ba1 c.37.1.8 (A:58-227) Ra 77.2 0.47 3.5E-05 43.8 2.4 21 686-706 8-28 (170)
434 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 77.0 0.35 2.6E-05 45.0 1.4 23 685-707 3-25 (177)
435 d1h65a_ c.37.1.8 (A:) Chloropl 77.0 0.64 4.7E-05 46.4 3.5 24 684-707 32-55 (257)
436 d1z0ja1 c.37.1.8 (A:2-168) Rab 76.9 0.48 3.5E-05 43.6 2.3 22 686-707 6-27 (167)
437 d2fn4a1 c.37.1.8 (A:24-196) r- 76.8 0.45 3.3E-05 44.2 2.0 23 685-707 7-29 (173)
438 d1a7ja_ c.37.1.6 (A:) Phosphor 76.8 0.58 4.2E-05 47.7 3.0 35 686-720 6-43 (288)
439 d2gjsa1 c.37.1.8 (A:91-258) Ra 76.5 0.47 3.4E-05 43.8 2.1 22 686-707 3-24 (168)
440 d2bmea1 c.37.1.8 (A:6-179) Rab 76.5 0.45 3.3E-05 44.0 2.0 21 686-706 7-27 (174)
441 d1svia_ c.37.1.8 (A:) Probable 76.1 0.4 2.9E-05 45.4 1.5 21 686-706 25-45 (195)
442 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 75.5 0.54 3.9E-05 43.3 2.2 22 686-707 5-26 (170)
443 d2fz4a1 c.37.1.19 (A:24-229) D 75.5 1.3 9.2E-05 42.4 5.1 31 400-430 88-118 (206)
444 d2jdid3 c.37.1.11 (D:82-357) C 75.1 1.6 0.00012 43.9 6.0 55 680-740 64-120 (276)
445 d1u8za_ c.37.1.8 (A:) Ras-rela 75.1 0.58 4.2E-05 43.1 2.4 21 686-706 6-26 (168)
446 d2eyqa3 c.37.1.19 (A:546-778) 74.8 2.2 0.00016 41.7 6.8 37 683-719 75-114 (233)
447 d1c1ya_ c.37.1.8 (A:) Rap1A {H 74.8 0.6 4.4E-05 42.8 2.4 22 686-707 5-26 (167)
448 d1mh1a_ c.37.1.8 (A:) Rac {Hum 74.7 0.53 3.8E-05 44.0 1.9 23 685-707 6-28 (183)
449 d1moza_ c.37.1.8 (A:) ADP-ribo 74.5 0.4 2.9E-05 44.8 1.0 27 680-706 13-39 (182)
450 d2g3ya1 c.37.1.8 (A:73-244) GT 74.5 0.6 4.4E-05 43.2 2.3 21 686-706 5-25 (172)
451 d1svsa1 c.37.1.8 (A:32-60,A:18 74.4 0.74 5.4E-05 42.8 2.9 22 399-420 4-25 (195)
452 d1x1ra1 c.37.1.8 (A:10-178) Ra 74.3 0.64 4.7E-05 42.9 2.4 23 685-707 5-27 (169)
453 d1ihua1 c.37.1.10 (A:1-296) Ar 74.2 1 7.4E-05 45.1 4.2 35 683-717 7-44 (296)
454 d1p6xa_ c.37.1.1 (A:) Thymidin 74.1 0.63 4.6E-05 48.5 2.5 25 399-423 8-32 (333)
455 d2fug31 b.52.2.2 (3:686-767) N 73.9 0.47 3.4E-05 38.9 1.2 26 95-120 30-55 (82)
456 d2fu5c1 c.37.1.8 (C:3-175) Rab 73.7 0.43 3.1E-05 44.2 1.0 21 686-706 8-28 (173)
457 d1u0la2 c.37.1.8 (A:69-293) Pr 73.6 0.56 4.1E-05 46.0 1.9 27 684-710 95-121 (225)
458 d1egaa1 c.37.1.8 (A:4-182) GTP 73.5 0.6 4.4E-05 43.1 2.0 21 686-706 7-27 (179)
459 d1wb1a4 c.37.1.8 (A:1-179) Elo 73.4 1.6 0.00011 40.5 5.1 21 686-706 7-27 (179)
460 d2bcgy1 c.37.1.8 (Y:3-196) GTP 73.3 0.6 4.4E-05 44.2 2.0 22 686-707 8-29 (194)
461 d2iv2x1 b.52.2.2 (X:565-715) F 72.8 1.4 9.8E-05 40.3 4.3 30 91-120 39-68 (151)
462 d1m7ba_ c.37.1.8 (A:) RhoE (RN 72.8 0.64 4.6E-05 43.5 2.0 23 685-707 3-25 (179)
463 d1mkya2 c.37.1.8 (A:173-358) P 72.8 0.67 4.8E-05 43.2 2.1 24 684-707 8-31 (186)
464 d2c78a3 c.37.1.8 (A:9-212) Elo 72.8 0.85 6.2E-05 43.8 3.0 26 396-421 2-27 (204)
465 d1hv8a1 c.37.1.19 (A:3-210) Pu 72.7 9.6 0.0007 35.9 10.9 23 398-420 43-65 (208)
466 d1wp9a1 c.37.1.19 (A:1-200) pu 71.9 1.1 8.3E-05 42.0 3.7 21 399-419 25-45 (200)
467 d1tq4a_ c.37.1.8 (A:) Interfer 71.7 0.82 6E-05 48.8 2.8 24 396-419 55-78 (400)
468 d1w1wa_ c.37.1.12 (A:) Smc hea 71.6 0.79 5.8E-05 48.3 2.7 24 687-710 28-51 (427)
469 d2atxa1 c.37.1.8 (A:9-193) Rho 71.6 0.69 5E-05 43.4 1.9 23 685-707 10-32 (185)
470 d2jioa1 b.52.2.2 (A:601-723) P 71.5 1.3 9.3E-05 38.9 3.6 28 93-120 40-67 (123)
471 d1cp2a_ c.37.1.10 (A:) Nitroge 71.5 1.6 0.00011 43.2 4.8 33 399-431 3-38 (269)
472 d1e9ra_ c.37.1.11 (A:) Bacteri 71.5 0.93 6.8E-05 48.3 3.2 34 684-717 50-86 (433)
473 d1lnza2 c.37.1.8 (A:158-342) O 71.1 0.6 4.4E-05 43.5 1.4 21 686-706 3-23 (185)
474 d1ogya1 b.52.2.2 (A:682-801) P 71.0 1.2 8.4E-05 39.0 3.2 36 93-131 36-72 (120)
475 d2dy1a2 c.37.1.8 (A:8-274) Elo 70.6 1.2 8.5E-05 44.8 3.5 25 398-422 3-27 (267)
476 d1ihua2 c.37.1.10 (A:308-586) 70.6 1.8 0.00013 42.9 5.1 33 399-431 22-57 (279)
477 d2ngra_ c.37.1.8 (A:) CDC42 {H 70.5 0.76 5.6E-05 43.2 2.0 22 686-707 5-26 (191)
478 d1i2ma_ c.37.1.8 (A:) Ran {Hum 70.4 0.43 3.1E-05 44.2 0.1 21 686-706 5-25 (170)
479 d1puia_ c.37.1.8 (A:) Probable 70.4 0.47 3.5E-05 43.8 0.4 23 684-706 16-38 (188)
480 d2b8ta1 c.37.1.24 (A:11-149) T 70.0 2.6 0.00019 37.7 5.5 67 688-755 6-91 (139)
481 d1osna_ c.37.1.1 (A:) Thymidin 69.8 0.76 5.5E-05 47.8 1.9 24 400-423 8-31 (331)
482 d2bv3a2 c.37.1.8 (A:7-282) Elo 68.9 1.4 0.0001 44.5 3.7 26 397-422 6-31 (276)
483 d2jdid3 c.37.1.11 (D:82-357) C 68.7 2.5 0.00018 42.4 5.6 25 397-421 68-92 (276)
484 d1g3qa_ c.37.1.10 (A:) Cell di 68.6 2.5 0.00018 40.4 5.5 33 398-430 3-39 (237)
485 d1vlfm1 b.52.2.2 (M:729-875) T 68.5 1.7 0.00012 39.3 3.8 28 93-120 41-68 (147)
486 d1gkub1 c.37.1.16 (B:1-250) He 68.4 2.1 0.00016 41.5 5.0 34 397-430 58-94 (237)
487 d1udxa2 c.37.1.8 (A:157-336) O 68.4 0.7 5.1E-05 42.9 1.2 21 686-706 3-23 (180)
488 d2jdia3 c.37.1.11 (A:95-379) C 67.4 3.1 0.00022 42.0 6.0 65 680-750 64-140 (285)
489 d1zcba2 c.37.1.8 (A:47-75,A:20 67.1 1 7.3E-05 42.2 2.0 19 686-704 4-22 (200)
490 d1byia_ c.37.1.10 (A:) Dethiob 66.8 2.2 0.00016 40.1 4.6 32 398-429 2-37 (224)
491 d1eu1a1 b.52.2.2 (A:626-780) D 66.7 2.1 0.00015 38.9 4.2 28 93-120 41-68 (155)
492 d1e2ka_ c.37.1.1 (A:) Thymidin 66.5 0.98 7.2E-05 46.8 1.9 25 400-424 7-31 (329)
493 d1wp9a1 c.37.1.19 (A:1-200) pu 66.4 1.3 9.6E-05 41.5 2.7 33 685-717 24-60 (200)
494 d1h0ha1 b.52.2.2 (A:813-977) T 66.0 1.9 0.00014 39.7 3.8 28 93-120 67-94 (165)
495 d1kqfa1 b.52.2.2 (A:851-1015) 65.7 2.1 0.00016 39.3 4.0 28 93-120 67-94 (165)
496 d1g7sa4 c.37.1.8 (A:1-227) Ini 65.3 1.8 0.00013 42.0 3.5 22 400-421 8-29 (227)
497 d2bmja1 c.37.1.8 (A:66-240) Ce 64.1 1.4 0.0001 41.0 2.3 23 685-707 6-28 (175)
498 d1g8fa3 c.37.1.15 (A:390-511) 63.7 2.2 0.00016 37.3 3.4 27 395-421 4-30 (122)
499 d1azta2 c.37.1.8 (A:35-65,A:20 62.9 1.3 9.4E-05 42.8 1.9 23 685-707 7-29 (221)
500 d1hyqa_ c.37.1.10 (A:) Cell di 61.9 3.7 0.00027 39.0 5.2 32 400-431 4-39 (232)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.6e-41 Score=362.21 Aligned_cols=221 Identities=41% Similarity=0.728 Sum_probs=196.9
Q ss_pred cchhHHhh-cCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEe
Q 002337 671 LLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 749 (934)
Q Consensus 671 l~~~~~~~-~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfi 749 (934)
+.+++.|. .|...++++|||||||||||++|+++|++++.++++++++++.++|+|+++++++++|+.|+..+||||||
T Consensus 31 ~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~~~g~~~~~l~~~f~~A~~~~P~il~i 110 (256)
T d1lv7a_ 31 LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFI 110 (256)
T ss_dssp HHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTSCCCCCHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhcchhHHHHHHHHHHHHHHHcCCEEEEE
Confidence 45566666 38888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCC-CchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHH
Q 002337 750 DELDSLAPARGASGD-SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828 (934)
Q Consensus 750 DEid~l~~~r~~~~~-~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~ 828 (934)
||+|.++++|+.... ......+++++||.+||++.. ..+|+||||||+|+.|||+++||||||+.|+|++ |+.++|.
T Consensus 111 DeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~-~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~-P~~~~R~ 188 (256)
T d1lv7a_ 111 DEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG-NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGRE 188 (256)
T ss_dssp TTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS-SSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCC-CCHHHHH
T ss_pred EChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC-CCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCC-cCHHHHH
Confidence 999999998865433 224567899999999999865 4679999999999999999999999999999996 8999999
Q ss_pred HHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHHHH
Q 002337 829 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKVLR 908 (934)
Q Consensus 829 ~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~al~ 908 (934)
+||+.+++++++..++++..+++. |+||+|+||.++|++|++.|+++. ...|+++||++|++
T Consensus 189 ~il~~~l~~~~~~~~~~~~~la~~-t~G~s~adi~~l~~~A~~~a~~~~-----------------~~~i~~~d~~~Al~ 250 (256)
T d1lv7a_ 189 QILKVHMRRVPLAPDIDAAIIARG-TPGFSGADLANLVNEAALFAARGN-----------------KRVVSMVEFEKAKD 250 (256)
T ss_dssp HHHHHHHTTSCBCTTCCHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHTT-----------------CSSBCHHHHHHHHH
T ss_pred HHHHHhccCCCcCcccCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHcC-----------------CCccCHHHHHHHHH
Confidence 999999999999999999999999 699999999999999999988642 23589999999998
Q ss_pred hhC
Q 002337 909 ELS 911 (934)
Q Consensus 909 ~~~ 911 (934)
++-
T Consensus 251 rv~ 253 (256)
T d1lv7a_ 251 KIM 253 (256)
T ss_dssp HHT
T ss_pred HHh
Confidence 863
No 2
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=6.8e-41 Score=358.88 Aligned_cols=252 Identities=40% Similarity=0.676 Sum_probs=215.7
Q ss_pred cCCHHHHHHHHHhhhcccccccCCCCCccchhHHhh-cCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 643 VMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 643 ~i~~ed~~~aL~~~k~~~~~~i~~pk~pl~~~~~~~-~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
+.+.++..+.+++.. .+|+.+++.|. .|+.+++|+|||||||||||++++++|++++.+|+.++++++.
T Consensus 6 v~G~~~~k~~l~~~i----------~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~ 75 (258)
T d1e32a2 6 VGGCRKQLAQIKEMV----------ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 75 (258)
T ss_dssp CCSCSHHHHHHHHHH----------HHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHT
T ss_pred hccHHHHHHHHHHHH----------HHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhc
Confidence 455566555555431 25788899988 4999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCC
Q 002337 722 NMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 801 (934)
Q Consensus 722 ~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~ 801 (934)
+.|+|+++.+++.+|+.|+..+||||||||+|.++++|+.. .++...++++.++..+++... ..+|+||||||+|+.
T Consensus 76 ~~~~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~--~~~~~~~~~~~~~~~~~~~~~-~~~vlvi~tTn~~~~ 152 (258)
T d1e32a2 76 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 152 (258)
T ss_dssp TSCTTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC--CCTTHHHHHHHHHHHHHTCCC-SSCEEEEEEESCGGG
T ss_pred ccccccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCC--CCchHHHHHHHhccccccccc-cCCccEEEeCCCccc
Confidence 99999999999999999999999999999999999988643 234567899999999998854 567999999999999
Q ss_pred CChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhccc
Q 002337 802 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSS 881 (934)
Q Consensus 802 lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~ 881 (934)
+|||++||||||++|+|++ |+.++|.+||+.++++.++..++++..+|++ |+||||+||.++|++|++.|++|.....
T Consensus 153 ld~al~r~gRfd~~i~~~~-P~~~~R~~il~~~l~~~~~~~~~~~~~la~~-t~G~s~adl~~lv~~A~~~a~~~~~~~~ 230 (258)
T d1e32a2 153 IDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKNMKLADDVDLEQVANE-THGHVGADLAALCSEAALQAIRKKMDLI 230 (258)
T ss_dssp SCGGGTSTTSSCEEEECCC-CCHHHHHHHHHHTTTTSCBCTTCCHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhcccccceeECCC-CCHHHHHHHhhhhccCcccccccchhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999997 8999999999999999999999999999999 6999999999999999999999876543
Q ss_pred CCCCCCccccccCcccccHHHHHHHHHh
Q 002337 882 DSNSDSSRIDQADSVVVEYDDFVKVLRE 909 (934)
Q Consensus 882 ~~~~~~~~~~~~~~~~it~~df~~al~~ 909 (934)
+........+......|+++||+.||++
T Consensus 231 ~~~~~~~~~~~~~~~~it~~Df~~AL~~ 258 (258)
T d1e32a2 231 DLEDETIDAEVMNSLAVTMDDFRWALSQ 258 (258)
T ss_dssp CCCSSCCBHHHHHHCCBCHHHHHHHHTC
T ss_pred chhhhhhhhhhhccCccCHHHHHHHhCc
Confidence 3221111122233457999999999864
No 3
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=5.4e-40 Score=348.89 Aligned_cols=234 Identities=36% Similarity=0.655 Sum_probs=201.2
Q ss_pred cCCHHHHHHHHHhhhcccccccCCCCCccchhHHhh-cCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 643 VMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 643 ~i~~ed~~~aL~~~k~~~~~~i~~pk~pl~~~~~~~-~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
+++.++..+.|+... .++.+++.|. .|...++++|||||||||||++|+++|++++.+++.++++++.
T Consensus 11 i~G~~~~k~~l~~~i-----------~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~ 79 (247)
T d1ixza_ 11 VAGAEEAKEELKEIV-----------EFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFV 79 (247)
T ss_dssp CCSCHHHHHHHHHHH-----------HHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHH
T ss_pred HccHHHHHHHHHHHH-----------HHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhh
Confidence 455666666665432 2345667776 4888899999999999999999999999999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCCCCCC-CchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCC
Q 002337 722 NMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD-SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD 800 (934)
Q Consensus 722 ~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~~~~~-~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~ 800 (934)
++|+|+++++++++|+.|+..+||||||||+|.++++|+.... ......+++++||.+||++.. ..+|+||||||+|+
T Consensus 80 ~~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~-~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 80 EMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK-DTAIVVMAATNRPD 158 (247)
T ss_dssp HSCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT-TCCEEEEEEESCGG
T ss_pred hccccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC-CCCEEEEEeCCCcc
Confidence 9999999999999999999999999999999999998865322 334567899999999999864 46899999999999
Q ss_pred CCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Q 002337 801 LIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLS 880 (934)
Q Consensus 801 ~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~ 880 (934)
.||++++||||||++|+|+. |+.++|.+||+.++++.+...++++..+|+. |+||+|+||.++|++|++.|+++.
T Consensus 159 ~ld~al~R~~Rf~~~i~~~~-P~~~eR~~il~~~l~~~~~~~~~~~~~la~~-t~g~s~~di~~lv~~A~l~a~~~~--- 233 (247)
T d1ixza_ 159 ILDPALLRPGRFDRQIAIDA-PDVKGREQILRIHARGKPLAEDVDLALLAKR-TPGFVGADLENLLNEAALLAAREG--- 233 (247)
T ss_dssp GSCGGGGSTTSSCEEEECCS-CCHHHHHHHHHHHHTTSCBCTTCCHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHTT---
T ss_pred ccCHhHcCCCCCcEEEEECC-cCHHHHHHHHHHHhcccCCccccCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHcC---
Confidence 99999999999999999996 8999999999999999999999999999999 599999999999999999998753
Q ss_pred cCCCCCCccccccCcccccHHHHHHHH
Q 002337 881 SDSNSDSSRIDQADSVVVEYDDFVKVL 907 (934)
Q Consensus 881 ~~~~~~~~~~~~~~~~~it~~df~~al 907 (934)
...|+++||++|+
T Consensus 234 --------------~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 234 --------------RRKITMKDLEEAA 246 (247)
T ss_dssp --------------CSSBCHHHHHHHT
T ss_pred --------------CCCcCHHHHHHhh
Confidence 1258999999996
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.3e-37 Score=334.37 Aligned_cols=237 Identities=51% Similarity=0.860 Sum_probs=186.2
Q ss_pred CccchhHHhh-cCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhhhhhHHHHHHHHhCCCcEE
Q 002337 669 LPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 747 (934)
Q Consensus 669 ~pl~~~~~~~-~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vl 747 (934)
+|+.+++.|. .|+.+++|+|||||||||||++|+++|++++.+|+.++++++.+.|.|+.+..++.+|..|+..+||||
T Consensus 25 ~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~f~~A~~~~p~il 104 (265)
T d1r7ra3 25 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 104 (265)
T ss_dssp HHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSCTTTHHHHHHHHHHHHHHTCSEEE
T ss_pred HHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhccccchHHHHHHHHHHHHhcCCcce
Confidence 4667777776 588999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccccccCCCCC-CCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHH
Q 002337 748 FFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 826 (934)
Q Consensus 748 fiDEid~l~~~r~~~-~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~ 826 (934)
||||+|.++.+|+.. +......+++++.|+++||++.. ..+|+||||||+|+.|||+++||||||++|+|+. |+.++
T Consensus 105 ~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~-~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~-p~~~~ 182 (265)
T d1r7ra3 105 FFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST-KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PDEKS 182 (265)
T ss_dssp EESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC-------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCC-CCCHH
T ss_pred eHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCC-CCCEEEEEeCCCchhCCHHHhCCCCccEEEEecc-hHHHH
Confidence 999999999887543 22334567799999999999865 4579999999999999999999999999999996 88899
Q ss_pred HHHHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHH
Q 002337 827 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKV 906 (934)
Q Consensus 827 r~~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~a 906 (934)
|.+||+.++++.....++++..+++. |+||+|+||.++|++|+..|+++.+...-.. ............++.+||..+
T Consensus 183 R~~il~~~l~~~~~~~~~~l~~la~~-t~g~s~~di~~lv~~A~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~v~~ 260 (265)
T d1r7ra3 183 RVAILKANLRKSPVAKDVDLEFLAKM-TNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPE 260 (265)
T ss_dssp HHHHHHHHTTCC----CCCCHHHHHH-HCSSCCHHHHHHHHHHHHHHHHHC-------------------------CHHH
T ss_pred HHHHHHHHhccCCchhhhhHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCccccccccccchHH
Confidence 99999999999988899999999999 6999999999999999999998876532111 000111122234667788777
Q ss_pred HHh
Q 002337 907 LRE 909 (934)
Q Consensus 907 l~~ 909 (934)
+++
T Consensus 261 i~~ 263 (265)
T d1r7ra3 261 IRR 263 (265)
T ss_dssp HHH
T ss_pred Hcc
Confidence 764
No 5
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=2.3e-31 Score=283.22 Aligned_cols=237 Identities=19% Similarity=0.236 Sum_probs=186.6
Q ss_pred CCCcCCchHHHHHHHHHhhccCCCccc---cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchH
Q 002337 366 NDFVPLQGDTVKILASILAPTLCPSVL---SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTS 442 (934)
Q Consensus 366 ~~~~~~~~~~~~~L~~il~p~l~p~~~---~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e 442 (934)
.+.+|++ +..+++.+++.++.+|..+ +.+.++++|||||||||||++|+++|++++.+++.++++++.+.+.|+++
T Consensus 12 ~Di~Gl~-~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~~~g~~~ 90 (256)
T d1lv7a_ 12 ADVAGCD-EAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGA 90 (256)
T ss_dssp GGSCSCH-HHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTSCCCCCH
T ss_pred HHHhchH-HHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhcchhHHH
Confidence 5566665 4567777777777777654 46778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcc
Q 002337 443 AALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQ 522 (934)
Q Consensus 443 ~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~ 522 (934)
..++++|+.|+.++||||||||+|.+++.++...... ......++..++.. .++.....
T Consensus 91 ~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~-----~~~~~~~~~~ll~~----------------~d~~~~~~ 149 (256)
T d1lv7a_ 91 SRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG-----HDEREQTLNQMLVE----------------MDGFEGNE 149 (256)
T ss_dssp HHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCT-----TCHHHHHHHHHHHH----------------HHTCCSSS
T ss_pred HHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCC-----cHHHHHHHHHHHHH----------------hhCCCCCC
Confidence 9999999999999999999999999987553222111 11112222222211 11112356
Q ss_pred cEEEEEecCCCCCCChhhhc--ccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHH
Q 002337 523 QVLLVAAADSSEGLPPTIRR--CFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHAL 600 (934)
Q Consensus 523 ~ViVIatTn~~~~Ld~aLrr--rF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L 600 (934)
+|+||||||+++.||++++| ||+++|.+++|+.++|.+|++.++++... ..+. .+..+++.|+||+++||..+
T Consensus 150 ~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~-~~~~----~~~~la~~t~G~s~adi~~l 224 (256)
T d1lv7a_ 150 GIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPL-APDI----DAAIIARGTPGFSGADLANL 224 (256)
T ss_dssp CEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCB-CTTC----CHHHHHHTCTTCCHHHHHHH
T ss_pred CEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCc-Cccc----CHHHHHHhCCCCCHHHHHHH
Confidence 79999999999999999997 89999999999999999999999977643 2333 36889999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCchhhhhhhhccCcchhhhhhcCCHHHHHHHHHhhh
Q 002337 601 VADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657 (934)
Q Consensus 601 ~~~A~~~ai~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~ed~~~aL~~~k 657 (934)
+++|+..+.++. ...++++|+..|++++.
T Consensus 225 ~~~A~~~a~~~~----------------------------~~~i~~~d~~~Al~rv~ 253 (256)
T d1lv7a_ 225 VNEAALFAARGN----------------------------KRVVSMVEFEKAKDKIM 253 (256)
T ss_dssp HHHHHHHHHHTT----------------------------CSSBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC----------------------------CCccCHHHHHHHHHHHh
Confidence 999988876531 23467899999998763
No 6
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=3.9e-31 Score=280.33 Aligned_cols=219 Identities=20% Similarity=0.251 Sum_probs=173.2
Q ss_pred CCCcCCchHHHHHHHHHhhccCCCccc---cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchH
Q 002337 366 NDFVPLQGDTVKILASILAPTLCPSVL---SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTS 442 (934)
Q Consensus 366 ~~~~~~~~~~~~~L~~il~p~l~p~~~---~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e 442 (934)
++.+|++ +++++|.+++.++.+|..+ +.+++++|||+||||||||++|+++|++++.+++.++++++.+++.|+++
T Consensus 9 ~di~G~~-~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~~~g~~~ 87 (247)
T d1ixza_ 9 KDVAGAE-EAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGA 87 (247)
T ss_dssp GGCCSCH-HHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHSCTTHHH
T ss_pred HHHccHH-HHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhccccHHH
Confidence 4565665 5667888888887777654 56778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcc
Q 002337 443 AALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQ 522 (934)
Q Consensus 443 ~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~ 522 (934)
..++++|+.|+.++||||||||+|.|+..+..... +.......++..++.. +++.....
T Consensus 88 ~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~-----~~~~~~~~~~~~ll~~----------------~d~~~~~~ 146 (247)
T d1ixza_ 88 ARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVG-----GGNDEREQTLNQLLVE----------------MDGFEKDT 146 (247)
T ss_dssp HHHHHHHHHHTTSSSEEEEEETHHHHHC--------------CHHHHHHHHHHHHH----------------HHTCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCC-----CCcHHHHHHHHHHHHH----------------hhCCCCCC
Confidence 99999999999999999999999999875432211 1112222233333211 11112356
Q ss_pred cEEEEEecCCCCCCChhhhc--ccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHH
Q 002337 523 QVLLVAAADSSEGLPPTIRR--CFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHAL 600 (934)
Q Consensus 523 ~ViVIatTn~~~~Ld~aLrr--rF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L 600 (934)
+|+||||||.++.+|++++| ||++.|+++.|+.++|.+|++.+++.... ..+ ..+..+++.|+||+++||..+
T Consensus 147 ~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~-~~~----~~~~~la~~t~g~s~~di~~l 221 (247)
T d1ixza_ 147 AIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPL-AED----VDLALLAKRTPGFVGADLENL 221 (247)
T ss_dssp CEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCB-CTT----CCHHHHHHTCTTCCHHHHHHH
T ss_pred CEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCC-ccc----cCHHHHHHHCCCCCHHHHHHH
Confidence 89999999999999999997 89999999999999999999999976543 223 346889999999999999999
Q ss_pred HHHHHHHHHHh
Q 002337 601 VADAGANLIRK 611 (934)
Q Consensus 601 ~~~A~~~ai~r 611 (934)
|++|.+.++++
T Consensus 222 v~~A~l~a~~~ 232 (247)
T d1ixza_ 222 LNEAALLAARE 232 (247)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99998887754
No 7
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97 E-value=3.7e-31 Score=282.80 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=191.8
Q ss_pred CCCcCCchHHHHHHHHH-hhccCCCccc---cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccch
Q 002337 366 NDFVPLQGDTVKILASI-LAPTLCPSVL---SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKT 441 (934)
Q Consensus 366 ~~~~~~~~~~~~~L~~i-l~p~l~p~~~---~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~ 441 (934)
.+.+|++. ..+.+.+. ..|+.+|+.+ +..+++++|||||||||||++++++|++++.+++.++++++.+.+.+++
T Consensus 4 ~dv~G~~~-~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g~~ 82 (258)
T d1e32a2 4 DDVGGCRK-QLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 82 (258)
T ss_dssp GGCCSCSH-HHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTTHH
T ss_pred hhhccHHH-HHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccccH
Confidence 45666664 55566554 4578888666 5678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhc
Q 002337 442 SAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICR 521 (934)
Q Consensus 442 e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~ 521 (934)
+..++.+|+.|..++||||||||+|.+..+++.... .....+...+...+ ......
T Consensus 83 ~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~-----~~~~~~~~~~~~~~-------------------~~~~~~ 138 (258)
T d1e32a2 83 ESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG-----EVERRIVSQLLTLM-------------------DGLKQR 138 (258)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCC-----TTHHHHHHHHHHHH-------------------HTCCCS
T ss_pred HHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCC-----chHHHHHHHhcccc-------------------cccccc
Confidence 999999999999999999999999999986533210 11122222222221 112336
Q ss_pred ccEEEEEecCCCCCCChhhhc--ccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHH
Q 002337 522 QQVLLVAAADSSEGLPPTIRR--CFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHA 599 (934)
Q Consensus 522 ~~ViVIatTn~~~~Ld~aLrr--rF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~ 599 (934)
.+|+||||||+++.+|++++| ||+++|+++.|+.++|.+|++.++++... ..+. .++.+|..|+||+++||..
T Consensus 139 ~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~-~~~~----~~~~la~~t~G~s~adl~~ 213 (258)
T d1e32a2 139 AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKL-ADDV----DLEQVANETHGHVGADLAA 213 (258)
T ss_dssp SCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCB-CTTC----CHHHHHHHCTTCCHHHHHH
T ss_pred CCccEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCccc-cccc----chhhhhhcccCCCHHHHHH
Confidence 779999999999999999998 89999999999999999999999976533 2233 3689999999999999999
Q ss_pred HHHHHHHHHHHhhcccccCCCCCchhhhhhhhccCcchhhhhhcCCHHHHHHHHH
Q 002337 600 LVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME 654 (934)
Q Consensus 600 L~~~A~~~ai~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~ed~~~aL~ 654 (934)
+|++|++.++++.....+..... ..........++++||..||.
T Consensus 214 lv~~A~~~a~~~~~~~~~~~~~~-----------~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 214 LCSEAALQAIRKKMDLIDLEDET-----------IDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSC-----------CBHHHHHHCCBCHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccccchhhhh-----------hhhhhhccCccCHHHHHHHhC
Confidence 99999999988754333322110 011122345689999999985
No 8
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=5.7e-29 Score=266.59 Aligned_cols=220 Identities=20% Similarity=0.294 Sum_probs=169.0
Q ss_pred CCCcCCchHHHHHHHH-HhhccCCCccc---cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccch
Q 002337 366 NDFVPLQGDTVKILAS-ILAPTLCPSVL---SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKT 441 (934)
Q Consensus 366 ~~~~~~~~~~~~~L~~-il~p~l~p~~~---~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~ 441 (934)
.+++|++. ++++|.+ +..|+.+|..+ +..++++||||||||||||++++++|+++|.+++.++++++.+.+.+++
T Consensus 7 ~di~G~~~-~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~~~~~ 85 (265)
T d1r7ra3 7 EDIGGLED-VKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 85 (265)
T ss_dssp SSCSSSSC-CCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSCTTTH
T ss_pred HHhcCHHH-HHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhccccch
Confidence 44555553 3344444 34566666554 5678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhc
Q 002337 442 SAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICR 521 (934)
Q Consensus 442 e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~ 521 (934)
+..++.+|..|+.++|||+||||+|.+...++.... ....+..+++..++..+ +.....
T Consensus 86 ~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~-----~~~~~~~~~~~~ll~~l----------------~~~~~~ 144 (265)
T d1r7ra3 86 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG-----DGGGAADRVINQILTEM----------------DGMSTK 144 (265)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCC-----TTHHHHHHHHHHHHHTC----------------C-----
T ss_pred HHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCC-----CCcHHHHHHHHHHHHHh----------------hCcCCC
Confidence 999999999999999999999999999875532211 11122222333332211 111235
Q ss_pred ccEEEEEecCCCCCCChhhhc--ccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHH
Q 002337 522 QQVLLVAAADSSEGLPPTIRR--CFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHA 599 (934)
Q Consensus 522 ~~ViVIatTn~~~~Ld~aLrr--rF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~ 599 (934)
.+++||||||.++.||++++| ||+++|+++.|+.++|.+||+.++++... ..+++ ++.++..|+||+++||..
T Consensus 145 ~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~-~~~~~----l~~la~~t~g~s~~di~~ 219 (265)
T d1r7ra3 145 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPV-AKDVD----LEFLAKMTNGFSGADLTE 219 (265)
T ss_dssp -CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCC----CHHHHHHHCSSCCHHHHH
T ss_pred CCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCc-hhhhh----HHHHHhcCCCCCHHHHHH
Confidence 679999999999999999987 89999999999999999999999876543 23333 588999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 002337 600 LVADAGANLIRKS 612 (934)
Q Consensus 600 L~~~A~~~ai~r~ 612 (934)
+|++|...++++.
T Consensus 220 lv~~A~~~A~~~~ 232 (265)
T d1r7ra3 220 ICQRACKLAIRES 232 (265)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 9
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.94 E-value=1.3e-29 Score=275.50 Aligned_cols=166 Identities=23% Similarity=0.235 Sum_probs=131.9
Q ss_pred CccchhHHhhc-CCCCCCccee-cCCCCCcchHHHHHHHHHcC--CcEEEecCccccccccchhhhhhHHHHHHHHhCCC
Q 002337 669 LPLLHKDLFSS-GLRKRSGVLL-YGPPGTGKTLLAKAVATECS--LNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 744 (934)
Q Consensus 669 ~pl~~~~~~~~-~~~~~~~iLl-~GppGtGKT~lakalA~~~~--~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p 744 (934)
++...|.++.. +.+.++|++| |||||||||++|+++|.+++ .+|+++++++++++|+|+++++++++|+.|+. |
T Consensus 106 ~~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~ 183 (321)
T d1w44a_ 106 LVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--H 183 (321)
T ss_dssp CCSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--C
T ss_pred ccccchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--c
Confidence 44455666663 6677788765 89999999999999999986 78999999999999999999999999999985 8
Q ss_pred cEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCC---CCCChhhhCCCCcceeeeecCC
Q 002337 745 CVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP---DLIDPALLRPGRFDKLLYVGVN 821 (934)
Q Consensus 745 ~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp---~~lD~allrpGRfd~~i~v~~P 821 (934)
|||||||||++.++|++++. .+..+|+++|||++|||+.. ..+|+||||||+. +.||++++||||||+.++++.
T Consensus 184 ~ilf~DEid~~~~~r~~~~~-~~~~~r~v~~lL~e~dg~~~-~~~v~viaatN~~~~~~~i~~~~~r~~Rf~~~v~v~~- 260 (321)
T d1w44a_ 184 RVIVIDSLKNVIGAAGGNTT-SGGISRGAFDLLSDIGAMAA-SRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVIS- 260 (321)
T ss_dssp SEEEEECCTTTC------------CCHHHHHHHHHHHHHHH-HHTCEEEEECCCCCCCHHHHHHHHHHHHHSCSEEEEE-
T ss_pred cEEEeehhhhhccccccCCC-CCcchhhhhhhhhhcccccc-CCCeEEEEeCCCcccccchhhhhhccCcccceeecCC-
Confidence 99999999999999975443 33456899999999999975 4679999999953 235567789999999999997
Q ss_pred CCHHHHHHHHHHHHhcCC
Q 002337 822 SDVSYRERVLKALTRKFK 839 (934)
Q Consensus 822 p~~~~r~~Il~~~~~~~~ 839 (934)
||.+.|.+||+.+++.+.
T Consensus 261 pd~~~r~~il~~~~~~~~ 278 (321)
T d1w44a_ 261 TDVDGEWQVLTRTGEGLQ 278 (321)
T ss_dssp CSSTTEEEEEEECBTTCC
T ss_pred CChHHHHHHHHHhccCcc
Confidence 888888888876655543
No 10
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.90 E-value=1.3e-24 Score=229.86 Aligned_cols=169 Identities=22% Similarity=0.330 Sum_probs=136.7
Q ss_pred CCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhh-hhhHHHHHHHHhCCCcEEEeccccccccCC
Q 002337 681 LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE-KNVRDIFQKARSARPCVIFFDELDSLAPAR 759 (934)
Q Consensus 681 ~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese-~~v~~lf~~A~~~~p~vlfiDEid~l~~~r 759 (934)
..++.++|||||||||||++|+++|++++.+|+.+++++++..+.+.++ +.++++|+.|+..+||||||||+|.+++.+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhc
Confidence 3457899999999999999999999999999999999998888877664 669999999999999999999999999877
Q ss_pred CCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcCC
Q 002337 760 GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 839 (934)
Q Consensus 760 ~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~~ 839 (934)
.... ...++++++|+..|++......+|+||||||+|+.+|++.++ +||+..|++|.+ ..|.+|++.+.+...
T Consensus 117 ~~~~---~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~-~rF~~~i~~P~~---~~r~~il~~l~~~~~ 189 (246)
T d1d2na_ 117 PIGP---RFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML-NAFSTTIHVPNI---ATGEQLLEALELLGN 189 (246)
T ss_dssp TTTT---BCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCT-TTSSEEEECCCE---EEHHHHHHHHHHHTC
T ss_pred cccc---chhHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhc-CccceEEecCCc---hhHHHHHHHHHhccC
Confidence 5422 234688999999999987767789999999999999876554 699999998643 346667766655433
Q ss_pred CCcCCCHHHHHhhCCCCCC
Q 002337 840 LLEDVSLYSIAKKCPPNFT 858 (934)
Q Consensus 840 ~~~~~~l~~la~~~t~g~s 858 (934)
..+.++..+++.+ .|++
T Consensus 190 -~~~~~~~~i~~~~-~g~~ 206 (246)
T d1d2na_ 190 -FKDKERTTIAQQV-KGKK 206 (246)
T ss_dssp -SCHHHHHHHHHHH-TTSE
T ss_pred -CChHHHHHHHHHc-CCCc
Confidence 2345567788773 6654
No 11
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.82 E-value=7.9e-21 Score=200.48 Aligned_cols=194 Identities=15% Similarity=0.175 Sum_probs=131.1
Q ss_pred CCCCcCCchHHHHHHHHHh---hccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccch
Q 002337 365 SNDFVPLQGDTVKILASIL---APTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKT 441 (934)
Q Consensus 365 ~~~~~~~~~~~~~~L~~il---~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~ 441 (934)
.+.++++...+...+.+.. .....+ ...++.+||||||||||||++|+++|++++.+++.+++++++..+.+..
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~---~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~ 84 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNS---DRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETA 84 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHC---SSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHH
T ss_pred ccCCcCcCHHHHHHHHHHHHHHHHHhcc---CCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccc
Confidence 3556666654444444433 222222 1245679999999999999999999999999999999998776655544
Q ss_pred -HHHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhh
Q 002337 442 -SAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKIC 520 (934)
Q Consensus 442 -e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~ 520 (934)
...++++|+.|..++||||||||+|.+...++.. ......+...+..+++.. ...
T Consensus 85 ~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~------~~~~~~~~~~ll~~l~~~------------------~~~ 140 (246)
T d1d2na_ 85 KCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIG------PRFSNLVLQALLVLLKKA------------------PPQ 140 (246)
T ss_dssp HHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTT------TBCCHHHHHHHHHHTTCC------------------CST
T ss_pred hhhhhhhhhhhhhhcccceeehhhhhhHhhhcccc------cchhHHHHHHHHHHhcCC------------------Ccc
Confidence 4679999999999999999999999998744221 112234444444443321 112
Q ss_pred cccEEEEEecCCCCCCChh-hhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCC
Q 002337 521 RQQVLLVAAADSSEGLPPT-IRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFM 593 (934)
Q Consensus 521 ~~~ViVIatTn~~~~Ld~a-LrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv 593 (934)
..+|+||||||+++.+++. +++||+..|.+|.+. +|.+|++.+.... . .....+..++..+.|..
T Consensus 141 ~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~P~~~--~r~~il~~l~~~~-~-----~~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 141 GRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIA--TGEQLLEALELLG-N-----FKDKERTTIAQQVKGKK 206 (246)
T ss_dssp TCEEEEEEEESCHHHHHHTTCTTTSSEEEECCCEE--EHHHHHHHHHHHT-C-----SCHHHHHHHHHHHTTSE
T ss_pred ccceeeeeccCChhhccchhhcCccceEEecCCch--hHHHHHHHHHhcc-C-----CChHHHHHHHHHcCCCc
Confidence 5679999999999998865 677999999886543 4445555443211 1 12344577788887743
No 12
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.82 E-value=8.3e-21 Score=207.14 Aligned_cols=146 Identities=25% Similarity=0.405 Sum_probs=122.4
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc--ccccchhhhhhHHHHHHHHhC-----CCcEEEecccccc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI--NMYIGESEKNVRDIFQKARSA-----RPCVIFFDELDSL 755 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~--~~~~Gese~~v~~lf~~A~~~-----~p~vlfiDEid~l 755 (934)
++.++||+||||||||++||++|+.++.+|+.++++++. +.|.|++++.++.+|..|+.. +||||||||||++
T Consensus 48 ~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki 127 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKI 127 (309)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGG
T ss_pred CCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeeeccccccccchhhhcccccccCCceEEehhhhhh
Confidence 578999999999999999999999999999999999997 458999999999999998763 5899999999999
Q ss_pred ccCCCCCCCCchhH-HHHHHhhhhhccCCcCC-------CCCEEEEEE----cCCCCCCChhhhCCCCcceeeeecCCCC
Q 002337 756 APARGASGDSGGVM-DRVVSQMLAEIDGLNDS-------SQDLFIIGA----SNRPDLIDPALLRPGRFDKLLYVGVNSD 823 (934)
Q Consensus 756 ~~~r~~~~~~~~~~-~~v~~~lL~~ldg~~~~-------~~~v~vI~a----TNrp~~lD~allrpGRfd~~i~v~~Pp~ 823 (934)
++++.... ..+. +.++++||+.|||.... ..++++|++ +|+|+.++|+++. ||+..+.++. |+
T Consensus 128 ~~~~~~~~--~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~~--R~~~~i~~~~-~~ 202 (309)
T d1ofha_ 128 CKKGEYSG--ADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQG--RLPIRVELTA-LS 202 (309)
T ss_dssp SCCSSCCS--SHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSCHHHHH--TCCEEEECCC-CC
T ss_pred hhhccCcc--cchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccchhhcCcccchhhhhh--hhheeeeccC-CC
Confidence 98775432 3344 44889999999986421 224566665 6788899999985 9999999995 89
Q ss_pred HHHHHHHHHH
Q 002337 824 VSYRERVLKA 833 (934)
Q Consensus 824 ~~~r~~Il~~ 833 (934)
.+.+.+|++.
T Consensus 203 ~~~~~~Il~~ 212 (309)
T d1ofha_ 203 AADFERILTE 212 (309)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
Confidence 9999999754
No 13
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.75 E-value=9.8e-20 Score=197.13 Aligned_cols=150 Identities=7% Similarity=0.110 Sum_probs=112.2
Q ss_pred CCCCceEEE-ECCCCCcHHHHHHHHHHHhC--CcEEEEecCccccccccchHHHHHHHHHHhhcCCCEEEEEcchhhccc
Q 002337 394 LKFRVAVLL-HGLPGCGKRTVVRYVARRLG--IHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470 (934)
Q Consensus 394 ~~~~~~VLL-~GppGtGKTtLaralA~elg--~~~~~I~~~~L~~~~~g~~e~~L~~~f~~A~~~~P~IL~IDEID~L~~ 470 (934)
.+.++|++| +||||||||.+|+++|++++ .+++.+++++++++|.|+++.+++.+|+.|+. ||||||||||.+.+
T Consensus 119 ~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~ilf~DEid~~~~ 196 (321)
T d1w44a_ 119 HRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HRVIVIDSLKNVIG 196 (321)
T ss_dssp EEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CSEEEEECCTTTC-
T ss_pred cccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--ccEEEeehhhhhcc
Confidence 455666655 89999999999999999986 67899999999999999999999999999985 89999999999998
Q ss_pred cccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCCCCChhh----hc--cc
Q 002337 471 LVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTI----RR--CF 544 (934)
Q Consensus 471 ~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aL----rr--rF 544 (934)
++...+... .....+.++|. .+++.....+|+|||||| ++.+++++ .| ||
T Consensus 197 ~r~~~~~~~---~~~r~v~~lL~--------------------e~dg~~~~~~v~viaatN-~~~~~~~i~~~~~r~~Rf 252 (321)
T d1w44a_ 197 AAGGNTTSG---GISRGAFDLLS--------------------DIGAMAASRGCVVIASLN-PTSNDDKIVELVKEASRS 252 (321)
T ss_dssp -------------CCHHHHHHHH--------------------HHHHHHHHHTCEEEEECC-CCCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCC---cchhhhhhhhh--------------------hccccccCCCeEEEEeCC-CcccccchhhhhhccCcc
Confidence 663322111 11122232222 234445567899999998 56666554 34 89
Q ss_pred ceEEEcCCCCHHHHHHHHHHhcccc
Q 002337 545 SHEISMGPLTEQQRVEMLSQLLQPV 569 (934)
Q Consensus 545 ~~eI~i~~Pde~~R~~IL~~ll~~~ 569 (934)
++.+.++.||.++|.+||+.+..+.
T Consensus 253 ~~~v~v~~pd~~~r~~il~~~~~~~ 277 (321)
T d1w44a_ 253 NSTSLVISTDVDGEWQVLTRTGEGL 277 (321)
T ss_dssp SCSEEEEECSSTTEEEEEEECBTTC
T ss_pred cceeecCCCChHHHHHHHHHhccCc
Confidence 9999999999999999988776554
No 14
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.67 E-value=5.9e-16 Score=161.35 Aligned_cols=191 Identities=25% Similarity=0.316 Sum_probs=132.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCCCCC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASG 763 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~~~~ 763 (934)
..++|||||||||||++|+++|++++.+++.+++++... ...+..++... ...+++|+||+|.+.+.+.
T Consensus 35 ~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~ide~~~~~~~~~--- 103 (238)
T d1in4a2 35 LDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK------QGDMAAILTSL--ERGDVLFIDEIHRLNKAVE--- 103 (238)
T ss_dssp CCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS------HHHHHHHHHHC--CTTCEEEEETGGGCCHHHH---
T ss_pred CCeEEEECCCCCcHHHHHHHHHhccCCCcccccCccccc------HHHHHHHHHhh--ccCCchHHHHHHHhhhHHH---
Confidence 458999999999999999999999999999999877642 23444454443 3458999999999853210
Q ss_pred CCchhHHHHHHhh-hhhccC-------CcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHH
Q 002337 764 DSGGVMDRVVSQM-LAEIDG-------LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835 (934)
Q Consensus 764 ~~~~~~~~v~~~l-L~~ldg-------~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~ 835 (934)
.....++... ...+.+ +.....++++|++||++..+++++++ ||+..++++. |+.+++..+++...
T Consensus 104 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~~~~~~~~--r~~~~~~~~~-~~~~~~~~~l~~~~ 177 (238)
T d1in4a2 104 ---ELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLSSPLRS--RFGIILELDF-YTVKELKEIIKRAA 177 (238)
T ss_dssp ---HHHHHHHHTSCCCC---------------CCCEEEEEESCGGGSCHHHHT--TCSEEEECCC-CCHHHHHHHHHHHH
T ss_pred ---hhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcccccccee--eeeEEEEecC-CCHHHHHHHHHHhh
Confidence 1111111110 000100 01123468899999999999999999 9999999996 88899999999888
Q ss_pred hcCCCCcCCC-HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHHHHhh
Q 002337 836 RKFKLLEDVS-LYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKVLREL 910 (934)
Q Consensus 836 ~~~~~~~~~~-l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 910 (934)
.......+.+ +..+++. .+.+++++.++++.+...|.... ...||.+++.+|+..+
T Consensus 178 ~~~~~~~~~~~l~~i~~~--s~gd~R~ai~~l~~~~~~~~~~~-----------------~~~it~~~~~~al~~l 234 (238)
T d1in4a2 178 SLMDVEIEDAAAEMIAKR--SRGTPRIAIRLTKRVRDMLTVVK-----------------ADRINTDIVLKTMEVL 234 (238)
T ss_dssp HHTTCCBCHHHHHHHHHT--STTCHHHHHHHHHHHHHHHHHHT-----------------CSSBCHHHHHHHHHHH
T ss_pred hhccchhhHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHhc-----------------CCccCHHHHHHHHHhh
Confidence 8766544433 6777776 34578888888887665554321 1247889999998765
No 15
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.65 E-value=1.9e-18 Score=191.55 Aligned_cols=172 Identities=18% Similarity=0.074 Sum_probs=119.4
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccc-cchhhhhhHHHHHHHH------hCCCcEEEecc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY-IGESEKNVRDIFQKAR------SARPCVIFFDE 751 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~-~Gese~~v~~lf~~A~------~~~p~vlfiDE 751 (934)
.+...+++++||||||||||++|+++|+.++.+|+++++++..+.+ +|........+|+.|. ...|+++|+||
T Consensus 149 ~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~De 228 (362)
T d1svma_ 149 YNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINN 228 (362)
T ss_dssp HCCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHH
T ss_pred hCCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEeh
Confidence 4667788999999999999999999999999999999998876553 4444444434444332 23355555555
Q ss_pred ccccccCCCCCCCCchhHHHHHHhhhhhccCCcC-----CCC------CEEEEEEcCCCCCCChhhhCCCCcceeeeecC
Q 002337 752 LDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND-----SSQ------DLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 820 (934)
Q Consensus 752 id~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~-----~~~------~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~ 820 (934)
+|.+.. .+||... ... .-.+|+|||. +|.+++||||||+.+++..
T Consensus 229 iD~l~~---------------------~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~ 284 (362)
T d1svma_ 229 LDNLRD---------------------YLDGSVKVNLEKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRP 284 (362)
T ss_dssp HHTTHH---------------------HHHCSSCEEECCSSSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCC
T ss_pred Hhhccc---------------------ccCCcchhhhhhhhhchhhhccCCceeeccc---ccccccccccCceEEeecC
Confidence 555543 3333210 000 1137779995 4677889999999999987
Q ss_pred CCCHHHHHHHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Q 002337 821 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 877 (934)
Q Consensus 821 Pp~~~~r~~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~ 877 (934)
|+.......+++.++++..+. .+.+.++.. +.+|+|+|+.++|++++..+.++.
T Consensus 285 ~~~~~~~~~~l~~i~~~~~l~--~~~~~L~~l-i~~~s~~D~~~~i~~~~~~~~~~l 338 (362)
T d1svma_ 285 KDYLKHCLERSEFLLEKRIIQ--SGIALLLML-IWYRPVAEFAQSIQSRIVEWKERL 338 (362)
T ss_dssp CHHHHHHHHTCTHHHHTTCTT--CHHHHHHHH-HHHSCGGGSCGGGHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhcccCCC--CCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 443333346677777776654 445667776 489999999999999988877654
No 16
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.65 E-value=1.1e-16 Score=174.19 Aligned_cols=179 Identities=13% Similarity=0.158 Sum_probs=121.9
Q ss_pred hHHHHHHHHHh-hccCCCccc----cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcccc--ccccchHHHH
Q 002337 373 GDTVKILASIL-APTLCPSVL----SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMA--SSERKTSAAL 445 (934)
Q Consensus 373 ~~~~~~L~~il-~p~l~p~~~----~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~--~~~g~~e~~L 445 (934)
++.++.+...+ .++.+.+.. ...++.++||+||||||||+|||++|+.++.+++.++++++.. .+.+..+..+
T Consensus 20 d~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~~~~~~ 99 (309)
T d1ofha_ 20 ADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSII 99 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeeeccccc
Confidence 45566666544 222222211 1236789999999999999999999999999999999999874 4678888999
Q ss_pred HHHHHHhhc-----CCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhh
Q 002337 446 AQAFNTAQS-----YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKIC 520 (934)
Q Consensus 446 ~~~f~~A~~-----~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~ 520 (934)
+.+|..|.. .+|||+||||||.+++.+..... + -....+...|..+++.. . .......+.
T Consensus 100 ~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~--~--~~~~gv~~~LL~~~dg~---~--------~~~~~~~i~ 164 (309)
T d1ofha_ 100 RDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGA--D--VSREGVQRDLLPLVEGS---T--------VSTKHGMVK 164 (309)
T ss_dssp HHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSS--H--HHHHHHHHHHHHHHHCC---E--------EEETTEEEE
T ss_pred cccchhhhcccccccCCceEEehhhhhhhhhccCccc--c--hhhhHHHHHhhHHhcCC---E--------EecCCeEEE
Confidence 999998864 25899999999999874422210 0 00111222122222110 0 000000112
Q ss_pred cccEEEEEe----cCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhc
Q 002337 521 RQQVLLVAA----ADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLL 566 (934)
Q Consensus 521 ~~~ViVIat----Tn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll 566 (934)
..++++|++ ++++..++|+++.||+..+.++.|+..++.+|+..+.
T Consensus 165 ~s~ilfi~~ga~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~~~ 214 (309)
T d1ofha_ 165 TDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPH 214 (309)
T ss_dssp CTTCEEEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHSST
T ss_pred ccceeEEeccchhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHHHHH
Confidence 345677776 5778889999999999999999999999999987654
No 17
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.58 E-value=3.7e-14 Score=147.50 Aligned_cols=200 Identities=20% Similarity=0.189 Sum_probs=128.2
Q ss_pred hHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchHHHHHHHHHHh
Q 002337 373 GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTA 452 (934)
Q Consensus 373 ~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e~~L~~~f~~A 452 (934)
++.+++|..++..... ..+...++|||||||||||++|+++|++++.+++.++..+.. ....+...+...
T Consensus 15 e~~~~~l~~~i~~~~~----~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 84 (238)
T d1in4a2 15 ENVKKKLSLALEAAKM----RGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLV------KQGDMAAILTSL 84 (238)
T ss_dssp HHHHHHHHHHHHHHHH----HTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCC------SHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh----cCCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccc------cHHHHHHHHHhh
Confidence 4567777766643221 123345799999999999999999999999999999887643 233444555443
Q ss_pred hcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCC
Q 002337 453 QSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADS 532 (934)
Q Consensus 453 ~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~ 532 (934)
...+++++||+|.+.+. ..+.+...++....... .+.............++++|++||.
T Consensus 85 --~~~~~~~ide~~~~~~~----------------~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~I~at~~ 143 (238)
T d1in4a2 85 --ERGDVLFIDEIHRLNKA----------------VEELLYSAIEDFQIDIM---IGKGPSAKSIRIDIQPFTLVGATTR 143 (238)
T ss_dssp --CTTCEEEEETGGGCCHH----------------HHHHHHHHHHTSCCCC------------------CCCEEEEEESC
T ss_pred --ccCCchHHHHHHHhhhH----------------HHhhcccceeeeeeeee---ecCcccccccccCCCCeEEEEecCC
Confidence 34689999999988641 11222222211100000 0000000111223567899999999
Q ss_pred CCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHHHHHHHHHH
Q 002337 533 SEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANL 608 (934)
Q Consensus 533 ~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L~~~A~~~a 608 (934)
+..+++++++||...+.++.|+..++..+++........ + ..+..+..++..+.| ..++...+++.+...+
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~-~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~ 214 (238)
T d1in4a2 144 SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDV---E-IEDAAAEMIAKRSRG-TPRIAIRLTKRVRDML 214 (238)
T ss_dssp GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTC---C-BCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHH
T ss_pred CccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccc---h-hhHHHHHHHHHhCCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987754332 2 224457777777765 5666666666654433
No 18
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.54 E-value=3e-14 Score=148.38 Aligned_cols=193 Identities=22% Similarity=0.281 Sum_probs=125.3
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCCCC
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 762 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~~~ 762 (934)
...++|||||||||||++|+++|++++.++..++++.... .+.....++. . ....+|+||||+|.+.+..
T Consensus 34 ~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~-~~~~~i~~iDe~~~~~~~~--- 103 (239)
T d1ixsb2 34 PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK--PGDLAAILAN----S-LEEGDILFIDEIHRLSRQA--- 103 (239)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCS--HHHHHHHHHT----T-CCTTCEEEEETGGGCCHHH---
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCcccc--chhhHHHHHh----h-ccCCCeeeeecccccchhH---
Confidence 3578999999999999999999999999999999876532 2222222211 1 1235799999999986321
Q ss_pred CCCchhHHHHHHh-hhhhccCC-------cCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHHH
Q 002337 763 GDSGGVMDRVVSQ-MLAEIDGL-------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKAL 834 (934)
Q Consensus 763 ~~~~~~~~~v~~~-lL~~ldg~-------~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~ 834 (934)
.+.....+.. ....+.+. .....++.+|++||++...+++.++ |+...+.+.. |+.+.+..|++..
T Consensus 104 ---~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~i~~~~ 177 (239)
T d1ixsb2 104 ---EEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLS--RFGIVEHLEY-YTPEELAQGVMRD 177 (239)
T ss_dssp ---HHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSSCSCGGGG--GCSEEEECCC-CCHHHHHHHHHHH
T ss_pred ---HHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCcccccchhhc--ccceeeEeec-cChhhhhHHHHHH
Confidence 1111112211 11111111 0112457788899999988888888 8888889985 7889999999888
Q ss_pred HhcCCCCcCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHHHHhh
Q 002337 835 TRKFKLLEDV-SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKVLREL 910 (934)
Q Consensus 835 ~~~~~~~~~~-~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~al~~~ 910 (934)
.++..+..+. .+..++..+ .| ..++..++++.+...|. . .....||.++..+++..+
T Consensus 178 ~~~~~i~~~~~~l~~ia~~s-~g-d~R~a~~~l~~~~~~a~-----~------------~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 178 ARLLGVRITEEAALEIGRRS-RG-TMRVAKRLFRRVRDFAQ-----V------------AGEEVITRERALEALAAL 235 (239)
T ss_dssp HGGGCCCBCHHHHHHHHHHT-TS-SHHHHHHHHHHHHHHHT-----T------------SCCSCBCHHHHHHHHHHH
T ss_pred HHHhCCccchHHHHHHHHHc-CC-CHHHHHHHHHHHHHHHH-----H------------hCCCCcCHHHHHHHHhhh
Confidence 8876654332 366777773 54 44555555554432221 0 122468999999999754
No 19
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.49 E-value=6.7e-13 Score=137.95 Aligned_cols=197 Identities=15% Similarity=0.150 Sum_probs=125.4
Q ss_pred hHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchHHHHHHHHHHh
Q 002337 373 GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTA 452 (934)
Q Consensus 373 ~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e~~L~~~f~~A 452 (934)
++.++.|..++...... .....++||+|||||||||+|+++|++++.++..+++..... ...........
T Consensus 15 ~~~~~~L~~~i~~~~~~----~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 84 (239)
T d1ixsb2 15 ERLKQKLRVYLEAAKAR----KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK------PGDLAAILANS 84 (239)
T ss_dssp HHHHHHHHHHHHHHTTS----SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCS------HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc----CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCcccc------chhhHHHHHhh
Confidence 46777887776544332 134567999999999999999999999999999999876432 11222222222
Q ss_pred hcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCC
Q 002337 453 QSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADS 532 (934)
Q Consensus 453 ~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~ 532 (934)
. ...++++|||+|.+.+.. ...+...+........ .+.. ...........++++|++|++
T Consensus 85 ~-~~~~i~~iDe~~~~~~~~------------~~~l~~~~e~~~~~~~------~~~~-~~~~~~~~~~~~~~~i~~~~~ 144 (239)
T d1ixsb2 85 L-EEGDILFIDEIHRLSRQA------------EEHLYPAMEDFVMDIV------IGQG-PAARTIRLELPRFTLIGATTR 144 (239)
T ss_dssp C-CTTCEEEEETGGGCCHHH------------HHHHHHHHHHSEEEEE------CSCT-TCCCEEEEECCCCEEEEEESC
T ss_pred c-cCCCeeeeecccccchhH------------HHhhhhhhhhhhhhhh------hccc-hhhhhcccCCCCEEEEeeccC
Confidence 2 245799999999876511 1222222322110000 0000 000111122456788999999
Q ss_pred CCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHHHHHH
Q 002337 533 SEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADA 604 (934)
Q Consensus 533 ~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L~~~A 604 (934)
+....+..++++...+.+..|+.+++..+++..+..... ..+ ...++.++..+.| ..++...+.+.+
T Consensus 145 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i---~~~-~~~l~~ia~~s~g-d~R~a~~~l~~~ 211 (239)
T d1ixsb2 145 PGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGV---RIT-EEAALEIGRRSRG-TMRVAKRLFRRV 211 (239)
T ss_dssp CSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCC---CBC-HHHHHHHHHHTTS-SHHHHHHHHHHH
T ss_pred cccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCC---ccc-hHHHHHHHHHcCC-CHHHHHHHHHHH
Confidence 988888888888889999999999999999987765432 222 4567888888887 344444444433
No 20
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.46 E-value=1.4e-12 Score=137.28 Aligned_cols=200 Identities=13% Similarity=0.209 Sum_probs=137.3
Q ss_pred CcCCchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHh----------CCcEEEEecCcccc--
Q 002337 368 FVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL----------GIHVVEYSCHNLMA-- 435 (934)
Q Consensus 368 ~~~~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~el----------g~~~~~I~~~~L~~-- 435 (934)
..+.+. .++++.+++.- +...+++|+||||+|||++++.+|..+ +.+++.++...+++
T Consensus 20 ~igRd~-Ei~~l~~iL~r---------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~ 89 (268)
T d1r6bx2 20 LIGREK-ELERAIQVLCR---------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 89 (268)
T ss_dssp CCSCHH-HHHHHHHHHTS---------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCC
T ss_pred ccChHH-HHHHHHHHHhc---------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccC
Confidence 344543 45555555531 233579999999999999999999875 56799999999987
Q ss_pred ccccchHHHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhh
Q 002337 436 SSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKE 515 (934)
Q Consensus 436 ~~~g~~e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~ 515 (934)
++.|+.+..++.++..+......|+||||++.|...... .+....+..+|+.++.
T Consensus 90 ~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~-------~g~~~d~a~~Lkp~L~------------------ 144 (268)
T d1r6bx2 90 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA-------SGGQVDAANLIKPLLS------------------ 144 (268)
T ss_dssp CCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCS-------SSCHHHHHHHHSSCSS------------------
T ss_pred ccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCC-------CCccccHHHHhhHHHh------------------
Confidence 567899999999999998888899999999999763211 1223455666655443
Q ss_pred hhhhhcccEEEEEecCCC-----CCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcC
Q 002337 516 IEKICRQQVLLVAAADSS-----EGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTS 590 (934)
Q Consensus 516 ~~~~~~~~ViVIatTn~~-----~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~ 590 (934)
++.+.+||+|+.- ..-++++.|||. .|.+..|+.++-.+|++.+.......|.-.-.+..+..++..++
T Consensus 145 -----rg~i~vIgatT~eey~~~~e~d~al~rrF~-~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ 218 (268)
T d1r6bx2 145 -----SGKIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 218 (268)
T ss_dssp -----SCCCEEEEEECHHHHHCCCCCTTSSGGGEE-EEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -----CCCCeEEEeCCHHHHHHHHhhcHHHHhhhc-ccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHH
Confidence 6788999998643 345899999996 99999999999999998765443332212222444444444332
Q ss_pred -----CCChHHHHHHHHHHHHHH
Q 002337 591 -----GFMPRDLHALVADAGANL 608 (934)
Q Consensus 591 -----Gfv~~DL~~L~~~A~~~a 608 (934)
.+-|.....+..+|+..+
T Consensus 219 ryi~~~~~PdKAIdllDea~a~~ 241 (268)
T d1r6bx2 219 KYINDRHLPDKAIDVIDEAGARA 241 (268)
T ss_dssp HHCTTSCTTHHHHHHHHHHHHHH
T ss_pred hhccCCCCCcHHHHHHHHHHHHH
Confidence 245555555667765444
No 21
>d1e32a3 d.31.1.1 (A:107-200) Membrane fusion atpase p97 domain 2, P97-Nc {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=7.4e-14 Score=120.66 Aligned_cols=67 Identities=31% Similarity=0.533 Sum_probs=60.1
Q ss_pred CcceeeEEEeeecCCCCccccccCCchhhhhhhHHHHHHHHHhhcc-CCCeeecCCEEEEecccCCCCccccccccccCC
Q 002337 238 KYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFE-VDRYLARGDVFSVCINWNCSSMICIPCRQRLHR 316 (934)
Q Consensus 238 ~~a~~~rv~~~~~p~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~f~-~~r~~~~gd~~~v~~~~~~~~~~~~~~~~~~~~ 316 (934)
|||+++|| +|.++|+++++++ +|+.+|+|||. .+|||++||+|.|...
T Consensus 3 ~~~krV~v----lP~~DTieglsgn----------lf~~ylkPYf~~~yrPv~~gD~f~v~g~----------------- 51 (94)
T d1e32a3 3 KYGKRIHV----LPIDDTVEGITGN----------LFEVYLKPYFLEAYRPIRKGDIFLVRGG----------------- 51 (94)
T ss_dssp CBCSCEEE----EEBGGGTTTCBSC----------HHHHTHHHHHTTSCEEEETTCEEEEEET-----------------
T ss_pred CcccEEEE----EecccccCCCCcc----------HHHHHHhHHHhhcCccccCCCEEEEccC-----------------
Confidence 69997555 8999999999999 99999999997 8999999999999863
Q ss_pred CCCceEEEEEEEEecCCCeEE
Q 002337 317 RSDNIIYFKVVAVEPSEETVL 337 (934)
Q Consensus 317 ~~~~~~~f~v~~~~~~~~~~~ 337 (934)
++.|+|||++++|++++++
T Consensus 52 --~r~VEFKVv~~dp~~~~iV 70 (94)
T d1e32a3 52 --MRAVEFKVVETDPSPYCIV 70 (94)
T ss_dssp --TEEEEEEEEEESSSSEEEE
T ss_pred --CeeEEEEEEeecCCCceEE
Confidence 7899999999999876655
No 22
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.39 E-value=9.8e-13 Score=137.52 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=107.9
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhh-hh-h-----HHHH---H--HHHhCCCcEE
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE-KN-V-----RDIF---Q--KARSARPCVI 747 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese-~~-v-----~~lf---~--~A~~~~p~vl 747 (934)
+.....++|||||||||||++|+++|++++.+++.+++++..+.+..... .+ + ...+ . ......+.++
T Consensus 48 ~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 127 (253)
T d1sxja2 48 GSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVI 127 (253)
T ss_dssp STTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEE
T ss_pred CCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEE
Confidence 33445789999999999999999999999999999999887654332111 00 0 0000 0 0122356799
Q ss_pred EeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHH
Q 002337 748 FFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYR 827 (934)
Q Consensus 748 fiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r 827 (934)
++||+|.+.... .+... .++..+.. ....++++++++....+++ +| |+...|+|+. |+.+++
T Consensus 128 ~ide~~~~~~~~------~~~~~----~~~~~~~~---~~~~ii~i~~~~~~~~~~~--l~--~~~~~i~f~~-~~~~~i 189 (253)
T d1sxja2 128 IMDEVDGMSGGD------RGGVG----QLAQFCRK---TSTPLILICNERNLPKMRP--FD--RVCLDIQFRR-PDANSI 189 (253)
T ss_dssp EECSGGGCCTTS------TTHHH----HHHHHHHH---CSSCEEEEESCTTSSTTGG--GT--TTSEEEECCC-CCHHHH
T ss_pred Eeeeccccccch------hhhhH----HHhhhhcc---ccccccccccccccccccc--cc--ceeeeeeccc-cchhHH
Confidence 999999986431 22222 22222221 2345777776666666664 44 6778999995 888999
Q ss_pred HHHHHHHHhc--CCCCcCCCHHHHHhhCCCCCCHHHHHHHHHH
Q 002337 828 ERVLKALTRK--FKLLEDVSLYSIAKKCPPNFTGADMYALCAD 868 (934)
Q Consensus 828 ~~Il~~~~~~--~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~ 868 (934)
..+++..+++ ..+.+ ..+..++..+ ++||+.++..
T Consensus 190 ~~~l~~i~~~e~i~i~~-~~l~~i~~~s-----~GDiR~ai~~ 226 (253)
T d1sxja2 190 KSRLMTIAIREKFKLDP-NVIDRLIQTT-----RGDIRQVINL 226 (253)
T ss_dssp HHHHHHHHHHHTCCCCT-THHHHHHHHT-----TTCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCH-HHHHHHHHhC-----CCcHHHHHHH
Confidence 9999888765 44443 3478888873 3588877653
No 23
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.37 E-value=1.1e-12 Score=138.24 Aligned_cols=203 Identities=22% Similarity=0.348 Sum_probs=132.2
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc----------CCcEEEecCccccc--cccchhhhhhHHHHHHHHhCCCcEEEe
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC----------SLNFLSVKGPELIN--MYIGESEKNVRDIFQKARSARPCVIFF 749 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~----------~~~~i~v~~~~l~~--~~~Gese~~v~~lf~~A~~~~p~vlfi 749 (934)
+...+++|.||||+|||++++.+|... +..++.++...++. +|.|+.|..++.+++.+......|+||
T Consensus 37 ~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfi 116 (268)
T d1r6bx2 37 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 116 (268)
T ss_dssp SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEE
T ss_pred CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCceEEe
Confidence 445799999999999999999999763 56799999999986 789999999999999998888899999
Q ss_pred ccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCC-----CCCChhhhCCCCcceeeeecCCCCH
Q 002337 750 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP-----DLIDPALLRPGRFDKLLYVGVNSDV 824 (934)
Q Consensus 750 DEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp-----~~lD~allrpGRfd~~i~v~~Pp~~ 824 (934)
||++.|....++++.+. -...++...| ..+.+-+||+|..- ..-|+||.| ||. .|.+. +|+.
T Consensus 117 Deih~l~~~g~~~g~~~-d~a~~Lkp~L--------~rg~i~vIgatT~eey~~~~e~d~al~r--rF~-~I~V~-Eps~ 183 (268)
T d1r6bx2 117 DEIHTIIGAGAASGGQV-DAANLIKPLL--------SSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQ-KIDIT-EPSI 183 (268)
T ss_dssp TTTTTTTTSCCSSSCHH-HHHHHHSSCS--------SSCCCEEEEEECHHHHHCCCCCTTSSGG--GEE-EEECC-CCCH
T ss_pred cchHHHhcCCCCCCccc-cHHHHhhHHH--------hCCCCeEEEeCCHHHHHHHHhhcHHHHh--hhc-ccccC-CCCH
Confidence 99999986643322211 1122222222 23578899988643 256899999 996 56777 4888
Q ss_pred HHHHHHHHHHHhcCCCCcCCC-----HH---HHHhh-CCC-CCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccC
Q 002337 825 SYRERVLKALTRKFKLLEDVS-----LY---SIAKK-CPP-NFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQAD 894 (934)
Q Consensus 825 ~~r~~Il~~~~~~~~~~~~~~-----l~---~la~~-~t~-g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~ 894 (934)
++-..|++.....+.....+. +. .++.+ .++ .|-+.-| .++.+|+..+-. .... ..
T Consensus 184 e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAI-dllDea~a~~~~---~~~~----------~~ 249 (268)
T d1r6bx2 184 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI-DVIDEAGARARL---MPVS----------KR 249 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHH-HHHHHHHHHHHH---SSSC----------CC
T ss_pred HHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHH-HHHHHHHHHHHh---hccc----------cC
Confidence 999999977665432111111 11 22222 223 3344333 366666533321 1111 12
Q ss_pred cccccHHHHHHHHHhhC
Q 002337 895 SVVVEYDDFVKVLRELS 911 (934)
Q Consensus 895 ~~~it~~df~~al~~~~ 911 (934)
...|+.+|++..+.++.
T Consensus 250 ~~~i~~~di~~~i~~~~ 266 (268)
T d1r6bx2 250 KKTVNVADIESVVARIA 266 (268)
T ss_dssp CCSCCHHHHHHHHHHHS
T ss_pred cccCCHHHHHHHHHHHh
Confidence 23578889888877653
No 24
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.37 E-value=3e-12 Score=134.99 Aligned_cols=198 Identities=14% Similarity=-0.002 Sum_probs=125.2
Q ss_pred cceecCCCCCcchHHHHHHHHHcC---------CcEEEecCcccccc----------------ccchhhhhhHHHHHHH-
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECS---------LNFLSVKGPELINM----------------YIGESEKNVRDIFQKA- 739 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~---------~~~i~v~~~~l~~~----------------~~Gese~~v~~lf~~A- 739 (934)
.++|+||||||||++++++++.+. ..+..+++...... +.|.+...+.+.+...
T Consensus 48 ~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 127 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNL 127 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHH
Confidence 467899999999999999998762 34455554433221 2233333333333332
Q ss_pred H-hCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCC------CChhhhCCCCc
Q 002337 740 R-SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL------IDPALLRPGRF 812 (934)
Q Consensus 740 ~-~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~------lD~allrpGRf 812 (934)
+ ...+.++++||+|.+...... +......+..+...+..... ...+.+|+.+|.++. .++++.+ ||
T Consensus 128 ~~~~~~~~~iide~d~l~~~~~~----~~~~~~~l~~l~~~l~~~~~-~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~ 200 (287)
T d1w5sa2 128 YVENHYLLVILDEFQSMLSSPRI----AAEDLYTLLRVHEEIPSRDG-VNRIGFLLVASDVRALSYMREKIPQVES--QI 200 (287)
T ss_dssp HHHTCEEEEEEESTHHHHSCTTS----CHHHHHHHHTHHHHSCCTTS-CCBEEEEEEEEETHHHHHHHHHCHHHHT--TC
T ss_pred HhccCccccceeEEEEecccccc----chhHHHHHHHHHHhcchhhc-ccceeEEeecccHHHHHHHHhhccchhc--cc
Confidence 2 345678899999999755431 11122233344444443332 346677777776653 3467787 99
Q ss_pred ceeeeecCCCCHHHHHHHHHHHHhcCCCCcCCC---HHHHHhhCCCCC-----CHHHHHHHHHHHHHHHHHHHhcccCCC
Q 002337 813 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVS---LYSIAKKCPPNF-----TGADMYALCADAWFHAAKRKVLSSDSN 884 (934)
Q Consensus 813 d~~i~v~~Pp~~~~r~~Il~~~~~~~~~~~~~~---l~~la~~~t~g~-----sgaDl~~l~~~A~~~A~~r~~~~~~~~ 884 (934)
...++++ |++.++..+|++...+.......++ +..+|+.. ..+ ..+...++|++|+..|..+.
T Consensus 201 ~~~i~f~-~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~-~~~~~~~gd~R~ai~~l~~a~~~A~~~~------- 271 (287)
T d1w5sa2 201 GFKLHLP-AYKSRELYTILEQRAELGLRDTVWEPRHLELISDVY-GEDKGGDGSARRAIVALKMACEMAEAMG------- 271 (287)
T ss_dssp SEEEECC-CCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHH-CGGGTSCCCHHHHHHHHHHHHHHHHHTT-------
T ss_pred ceeeecc-CCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHH-hccccCCCCHHHHHHHHHHHHHHHHHcC-------
Confidence 9999999 5999999999998876533222233 66666652 322 44566678888887775431
Q ss_pred CCCccccccCcccccHHHHHHHHHh
Q 002337 885 SDSSRIDQADSVVVEYDDFVKVLRE 909 (934)
Q Consensus 885 ~~~~~~~~~~~~~it~~df~~al~~ 909 (934)
...||.+|+++|+++
T Consensus 272 ----------~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 272 ----------RDSLSEDLVRKAVSE 286 (287)
T ss_dssp ----------CSSCCHHHHHHHHHH
T ss_pred ----------CCCCCHHHHHHHHhc
Confidence 236999999999875
No 25
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.35 E-value=4.6e-12 Score=130.79 Aligned_cols=172 Identities=19% Similarity=0.234 Sum_probs=114.7
Q ss_pred CCCcCCchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhC-----CcEEEEecCccccccccc
Q 002337 366 NDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLG-----IHVVEYSCHNLMASSERK 440 (934)
Q Consensus 366 ~~~~~~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg-----~~~~~I~~~~L~~~~~g~ 440 (934)
.+..+. .+.++.|...+..- ...++||+||||+||||+|+++|++++ ..++++++++..+.. .
T Consensus 24 ~diig~-~~~~~~l~~~i~~~---------~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~~~~--~ 91 (231)
T d1iqpa2 24 DDIVGQ-EHIVKRLKHYVKTG---------SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGIN--V 91 (231)
T ss_dssp TTCCSC-HHHHHHHHHHHHHT---------CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHH--T
T ss_pred HHccCc-HHHHHHHHHHHHcC---------CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCcccchh--H
Confidence 344433 45667777766422 123599999999999999999999874 468888887533211 1
Q ss_pred hHHHHHHHHHH--hhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhh
Q 002337 441 TSAALAQAFNT--AQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEK 518 (934)
Q Consensus 441 ~e~~L~~~f~~--A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~ 518 (934)
........... .....+.++++||+|.+.. .....|..+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~iilide~d~~~~----------------~~~~~ll~~l~--------------------- 134 (231)
T d1iqpa2 92 IREKVKEFARTKPIGGASFKIIFLDEADALTQ----------------DAQQALRRTME--------------------- 134 (231)
T ss_dssp THHHHHHHHHSCCGGGCSCEEEEEETGGGSCH----------------HHHHHHHHHHH---------------------
T ss_pred HHHHHHHHHhhhhccCCCceEEeehhhhhcch----------------hHHHHHhhhcc---------------------
Confidence 11111111111 1234578999999997764 11222323221
Q ss_pred hhcccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCC
Q 002337 519 ICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG 591 (934)
Q Consensus 519 ~~~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~G 591 (934)
....++.+|++||....+++++++|+. .+.+++|+..+...+++..++.... +. .+..++.+++.+.|
T Consensus 135 ~~~~~~~~i~~~n~~~~i~~~l~sR~~-~i~~~~~~~~~~~~~l~~~~~~e~i---~i-~~~~l~~I~~~~~g 202 (231)
T d1iqpa2 135 MFSSNVRFILSCNYSSKIIEPIQSRCA-IFRFRPLRDEDIAKRLRYIAENEGL---EL-TEEGLQAILYIAEG 202 (231)
T ss_dssp HTTTTEEEEEEESCGGGSCHHHHHTEE-EEECCCCCHHHHHHHHHHHHHTTTC---EE-CHHHHHHHHHHHTT
T ss_pred cCCcceEEEeccCChhhchHhHhCccc-cccccccchhhHHHHHHHHHHHhCC---CC-CHHHHHHHHHHcCC
Confidence 124567899999999999999999985 8999999999999999988765432 22 24567888888766
No 26
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.31 E-value=1.7e-12 Score=134.12 Aligned_cols=143 Identities=22% Similarity=0.257 Sum_probs=101.2
Q ss_pred CcceecCCCCCcchHHHHHHHHHcC-----CcEEEecCccccccccchhhhhhHHHHHHH------HhCCCcEEEecccc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECS-----LNFLSVKGPELINMYIGESEKNVRDIFQKA------RSARPCVIFFDELD 753 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~-----~~~i~v~~~~l~~~~~Gese~~v~~lf~~A------~~~~p~vlfiDEid 753 (934)
.++||+||||+|||++|+++|++++ .+++.+++++..+. ..++..+... ....+.|+++||+|
T Consensus 46 ~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~iilide~d 119 (231)
T d1iqpa2 46 PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGI------NVIREKVKEFARTKPIGGASFKIIFLDEAD 119 (231)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHH------HTTHHHHHHHHHSCCGGGCSCEEEEEETGG
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCcccch------hHHHHHHHHHHhhhhccCCCceEEeehhhh
Confidence 4699999999999999999999764 46888887654321 1222222222 23466899999999
Q ss_pred ccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHH
Q 002337 754 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKA 833 (934)
Q Consensus 754 ~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~ 833 (934)
.+... ..+.|+..++. ...++.+|++||.+..+++++++ |+. .+.++ ||+......+++.
T Consensus 120 ~~~~~-------------~~~~ll~~l~~---~~~~~~~i~~~n~~~~i~~~l~s--R~~-~i~~~-~~~~~~~~~~l~~ 179 (231)
T d1iqpa2 120 ALTQD-------------AQQALRRTMEM---FSSNVRFILSCNYSSKIIEPIQS--RCA-IFRFR-PLRDEDIAKRLRY 179 (231)
T ss_dssp GSCHH-------------HHHHHHHHHHH---TTTTEEEEEEESCGGGSCHHHHH--TEE-EEECC-CCCHHHHHHHHHH
T ss_pred hcchh-------------HHHHHhhhccc---CCcceEEEeccCChhhchHhHhC--ccc-ccccc-ccchhhHHHHHHH
Confidence 88632 23334444442 23568899999999999999998 885 57787 4888899999998
Q ss_pred HHhcCCCC-cCCCHHHHHhhC
Q 002337 834 LTRKFKLL-EDVSLYSIAKKC 853 (934)
Q Consensus 834 ~~~~~~~~-~~~~l~~la~~~ 853 (934)
..++.++. .+-.+..+++.+
T Consensus 180 ~~~~e~i~i~~~~l~~I~~~~ 200 (231)
T d1iqpa2 180 IAENEGLELTEEGLQAILYIA 200 (231)
T ss_dssp HHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHhCCCCCHHHHHHHHHHc
Confidence 88876653 223467788773
No 27
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.30 E-value=2.8e-11 Score=126.13 Aligned_cols=184 Identities=17% Similarity=0.226 Sum_probs=112.2
Q ss_pred hHHHHHHHHHhhcc--------CCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchHHH
Q 002337 373 GDTVKILASILAPT--------LCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444 (934)
Q Consensus 373 ~~~~~~L~~il~p~--------l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e~~ 444 (934)
++.+++|...+.-. .+.+..+.....++||+|||||||||+|+++|++++.+++.+++++..+..... ..
T Consensus 20 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~~~~~~--~~ 97 (253)
T d1sxja2 20 KGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLN--AG 97 (253)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCHHHHH--HT
T ss_pred HHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchhhHHHH--HH
Confidence 45566666654321 122222344556899999999999999999999999999999998765432110 00
Q ss_pred HHHHH--------------HHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCC
Q 002337 445 LAQAF--------------NTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGY 510 (934)
Q Consensus 445 L~~~f--------------~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~ 510 (934)
+...+ .......+.++++||+|.+... ... .....+ ++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~---------~~~---~~~~~~-~~~-------------- 150 (253)
T d1sxja2 98 VKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGG---------DRG---GVGQLA-QFC-------------- 150 (253)
T ss_dssp GGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTT---------STT---HHHHHH-HHH--------------
T ss_pred HHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccc---------hhh---hhHHHh-hhh--------------
Confidence 00000 0011224679999999987641 111 111111 111
Q ss_pred CchhhhhhhhcccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcC
Q 002337 511 FPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTS 590 (934)
Q Consensus 511 ~~~~~~~~~~~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~ 590 (934)
.....+++++++++....++ .+++++ ..+.+++|+.+++..+++..+..... .++ +..++.++..+.
T Consensus 151 -------~~~~~~ii~i~~~~~~~~~~-~l~~~~-~~i~f~~~~~~~i~~~l~~i~~~e~i---~i~-~~~l~~i~~~s~ 217 (253)
T d1sxja2 151 -------RKTSTPLILICNERNLPKMR-PFDRVC-LDIQFRRPDANSIKSRLMTIAIREKF---KLD-PNVIDRLIQTTR 217 (253)
T ss_dssp -------HHCSSCEEEEESCTTSSTTG-GGTTTS-EEEECCCCCHHHHHHHHHHHHHHHTC---CCC-TTHHHHHHHHTT
T ss_pred -------cccccccccccccccccccc-ccccee-eeeeccccchhHHHHHHHHHHHHhCC---CCC-HHHHHHHHHhCC
Confidence 11134566666665555555 455554 59999999999999999988754322 222 235788888876
Q ss_pred CCChHHHHHHHH
Q 002337 591 GFMPRDLHALVA 602 (934)
Q Consensus 591 Gfv~~DL~~L~~ 602 (934)
| |++.++.
T Consensus 218 G----DiR~ai~ 225 (253)
T d1sxja2 218 G----DIRQVIN 225 (253)
T ss_dssp T----CHHHHHH
T ss_pred C----cHHHHHH
Confidence 5 7766543
No 28
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.29 E-value=1.9e-11 Score=127.87 Aligned_cols=197 Identities=16% Similarity=0.135 Sum_probs=124.6
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc----CCcEEEecCcccccc----------------ccchhhhh-hHHHHHHHH
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC----SLNFLSVKGPELINM----------------YIGESEKN-VRDIFQKAR 740 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~----~~~~i~v~~~~l~~~----------------~~Gese~~-v~~lf~~A~ 740 (934)
..+.+++|+||||||||++++++++.+ +..++.+++...... +.+..... ...+.+...
T Consensus 41 ~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (276)
T d1fnna2 41 HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLR 120 (276)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHh
Confidence 346799999999999999999999886 456777766433211 12222222 223333333
Q ss_pred -hCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCC---CCCChhhhCCCCcc-ee
Q 002337 741 -SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP---DLIDPALLRPGRFD-KL 815 (934)
Q Consensus 741 -~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp---~~lD~allrpGRfd-~~ 815 (934)
...+.++++|++|.+... .......++..+... ....+.+|+++|.. +.+++++.+ |+. ..
T Consensus 121 ~~~~~~~~~~~~~d~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~ 186 (276)
T d1fnna2 121 ERDLYMFLVLDDAFNLAPD----------ILSTFIRLGQEADKL--GAFRIALVIVGHNDAVLNNLDPSTRG--IMGKYV 186 (276)
T ss_dssp HTTCCEEEEEETGGGSCHH----------HHHHHHHHTTCHHHH--SSCCEEEEEEESSTHHHHTSCHHHHH--HHTTCE
T ss_pred hcccccccchhHHHHhhhh----------hhhhHHHHHhccccc--cccceEEeecCCchhhhhhcchhhhh--hhcchh
Confidence 345678889999987522 122333444433332 23467888888875 467888887 653 46
Q ss_pred eeecCCCCHHHHHHHHHHHHhcCCCC---cCCCHHHHHhhC-----CCCC--CHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 002337 816 LYVGVNSDVSYRERVLKALTRKFKLL---EDVSLYSIAKKC-----PPNF--TGADMYALCADAWFHAAKRKVLSSDSNS 885 (934)
Q Consensus 816 i~v~~Pp~~~~r~~Il~~~~~~~~~~---~~~~l~~la~~~-----t~g~--sgaDl~~l~~~A~~~A~~r~~~~~~~~~ 885 (934)
|+++ |++.+++.+|++..++..... .+..++.+++.+ ...+ +.+.+.++|+.|+..|..+.
T Consensus 187 i~~~-~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~-------- 257 (276)
T d1fnna2 187 IRFS-PYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNG-------- 257 (276)
T ss_dssp EECC-CCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTT--------
T ss_pred cccc-chhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcC--------
Confidence 7888 589999999998877653322 222245555541 0111 34566788988887776431
Q ss_pred CCccccccCcccccHHHHHHHHHhh
Q 002337 886 DSSRIDQADSVVVEYDDFVKVLREL 910 (934)
Q Consensus 886 ~~~~~~~~~~~~it~~df~~al~~~ 910 (934)
...|+.+|+++|++++
T Consensus 258 ---------~~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 258 ---------RKHIAPEDVRKSSKEV 273 (276)
T ss_dssp ---------CSSCCHHHHHHHHHHH
T ss_pred ---------CCCcCHHHHHHHHHHH
Confidence 2369999999999876
No 29
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.28 E-value=2.5e-12 Score=128.43 Aligned_cols=152 Identities=16% Similarity=0.293 Sum_probs=109.7
Q ss_pred cCCchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHh----------CCcEEEEecCccccc--
Q 002337 369 VPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL----------GIHVVEYSCHNLMAS-- 436 (934)
Q Consensus 369 ~~~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~el----------g~~~~~I~~~~L~~~-- 436 (934)
.+.+ +.++++.+++.- +...+++|+||||+|||++++.+|..+ +.+++.++...+++.
T Consensus 25 igRd-~Ei~~l~~iL~r---------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg~~ 94 (195)
T d1jbka_ 25 IGRD-EEIRRTIQVLQR---------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 94 (195)
T ss_dssp CSCH-HHHHHHHHHHTS---------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTTTC
T ss_pred cCcH-HHHHHHHHHHhc---------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHhccCC
Confidence 3444 345555555531 233479999999999999999999876 578999999998864
Q ss_pred cccchHHHHHHHHHHhhcC-CCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhh
Q 002337 437 SERKTSAALAQAFNTAQSY-SPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKE 515 (934)
Q Consensus 437 ~~g~~e~~L~~~f~~A~~~-~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~ 515 (934)
+.|+.+.++..+++++... ...|+||||++.|.......+ ...+..+|+.+++
T Consensus 95 ~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g--------~~d~~~~Lkp~L~------------------ 148 (195)
T d1jbka_ 95 YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG--------AMDAGNMLKPALA------------------ 148 (195)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT--------------CCCCHHHHHHHHH------------------
T ss_pred ccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCC--------cccHHHHHHHHHh------------------
Confidence 4578999999999887554 468999999999975321111 1123445555543
Q ss_pred hhhhhcccEEEEEecCCCC-----CCChhhhcccceEEEcCCCCHHHHHHHH
Q 002337 516 IEKICRQQVLLVAAADSSE-----GLPPTIRRCFSHEISMGPLTEQQRVEML 562 (934)
Q Consensus 516 ~~~~~~~~ViVIatTn~~~-----~Ld~aLrrrF~~eI~i~~Pde~~R~~IL 562 (934)
++.+.+||+|+..+ .-++++.+||. .|.+..|+.++-..|+
T Consensus 149 -----rg~l~~IgatT~eey~~~~e~d~aL~rrF~-~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 149 -----RGELHCVGATTLDEYRQYIEKDAALERRFQ-KVFVAEPSVEDTIAIL 194 (195)
T ss_dssp -----TTSCCEEEEECHHHHHHHTTTCHHHHTTEE-EEECCCCCHHHHHTTC
T ss_pred -----CCCceEEecCCHHHHHHHHHcCHHHHhcCC-EeecCCCCHHHHHHHh
Confidence 67788899986432 35899999996 9999999999877765
No 30
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.25 E-value=1.4e-11 Score=133.31 Aligned_cols=178 Identities=21% Similarity=0.328 Sum_probs=120.0
Q ss_pred CcceecCCCCCcchHHHHHHHHHc---CCcEEEecCccccc------------cccchhhhhhHHHHHHHHhCCCcEEEe
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELIN------------MYIGESEKNVRDIFQKARSARPCVIFF 749 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~------------~~~Gese~~v~~lf~~A~~~~p~vlfi 749 (934)
..+||+||+|+|||.+|+++|..+ +.+|+.++++++.. .|+|..+. ..+.+..+++.-|||+|
T Consensus 54 ~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~--~~l~~~~~~~p~~Vvl~ 131 (315)
T d1qvra3 54 GSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEG--GQLTEAVRRRPYSVILF 131 (315)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGGGC----------------CHHHHHHHCSSEEEEE
T ss_pred eEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhhhhcCCCCCCcCcccC--ChHHHHHHhCCCcEEEE
Confidence 357899999999999999999987 67899999877653 24554332 23445555666699999
Q ss_pred ccccccccCCCCCCCCchhHHHHHHhhhhhccCC--------cCCCCCEEEEEEcCC-----------------------
Q 002337 750 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL--------NDSSQDLFIIGASNR----------------------- 798 (934)
Q Consensus 750 DEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~--------~~~~~~v~vI~aTNr----------------------- 798 (934)
||||+..+ .+++.|+..+|.- .....+.++|+|||-
T Consensus 132 DEieK~~~-------------~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~ 198 (315)
T d1qvra3 132 DEIEKAHP-------------DVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVF 198 (315)
T ss_dssp SSGGGSCH-------------HHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ehHhhcCH-------------HHHHHHHHHhccCceeCCCCcEecCcceEEEEecccChHHHhhhcccccchhhhhHHHH
Confidence 99999863 2455555554432 112357999999995
Q ss_pred ---CCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcC-------CCCcCC---CHHHHHhh-CCCCCCHHHHHH
Q 002337 799 ---PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF-------KLLEDV---SLYSIAKK-CPPNFTGADMYA 864 (934)
Q Consensus 799 ---p~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~-------~~~~~~---~l~~la~~-~t~g~sgaDl~~ 864 (934)
.+.+.|+++. |||..+.|. |.+.+...+|+...+..+ .+.-.+ .++.|+++ ....|-++.|+.
T Consensus 199 ~~l~~~f~pEfln--Rid~Ii~F~-~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~~~~~~~L~~~~y~~~~GAR~L~r 275 (315)
T d1qvra3 199 KVLQQHFRPEFLN--RLDEIVVFR-PLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRR 275 (315)
T ss_dssp HHHHTTSCHHHHH--TCSBCCBCC-CCCHHHHHHHHHHHHHHHHHHHHTTTCEEEECHHHHHHHHHHHCBTTTBTSTHHH
T ss_pred HHHHhhcCHHHHh--cCCeeeecc-chhhhhhHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHhCCCCCCCcchHHH
Confidence 2458899998 999999888 578888888876554432 111111 24567765 245666688998
Q ss_pred HHHHHHHHHHHHHhcc
Q 002337 865 LCADAWFHAAKRKVLS 880 (934)
Q Consensus 865 l~~~A~~~A~~r~~~~ 880 (934)
.+++.....+-+.+..
T Consensus 276 ~Ie~~i~~~La~~iL~ 291 (315)
T d1qvra3 276 VIQRELETPLAQKILA 291 (315)
T ss_dssp HHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888777777665543
No 31
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.25 E-value=7.2e-12 Score=128.83 Aligned_cols=183 Identities=19% Similarity=0.159 Sum_probs=110.8
Q ss_pred cceecCCCCCcchHHHHHHHHHcCC-----cEEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCC
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSL-----NFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 760 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~-----~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~ 760 (934)
++|||||||+|||++|+++|++++. .++..+.++..+.............+.........+++|||+|.+..
T Consensus 37 ~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~--- 113 (227)
T d1sxjc2 37 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN--- 113 (227)
T ss_dssp CEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCH---
T ss_pred eEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchhhccccccccCCCeEEEEEeccccchh---
Confidence 6999999999999999999998642 35566655443221111111000000011122345999999998852
Q ss_pred CCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcCCC
Q 002337 761 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 840 (934)
Q Consensus 761 ~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~~~ 840 (934)
...+.|+..|+.. ...++++.+||.+..+++++++ |+ ..+.|. |+..++...+++..+++.++
T Consensus 114 ----------~~~~~Ll~~le~~---~~~~~~~~~~~~~~~i~~~i~s--r~-~~i~~~-~~~~~~i~~~l~~I~~~e~i 176 (227)
T d1sxjc2 114 ----------AAQNALRRVIERY---TKNTRFCVLANYAHKLTPALLS--QC-TRFRFQ-PLPQEAIERRIANVLVHEKL 176 (227)
T ss_dssp ----------HHHHHHHHHHHHT---TTTEEEEEEESCGGGSCHHHHT--TS-EEEECC-CCCHHHHHHHHHHHHHTTTC
T ss_pred ----------hHHHHHHHHhhhc---ccceeeccccCcHHHhHHHHHH--HH-hhhccc-cccccccccccccccccccc
Confidence 2344555555543 3567888899999999999998 87 466777 47777778888776665443
Q ss_pred C-cCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHHH
Q 002337 841 L-EDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKVL 907 (934)
Q Consensus 841 ~-~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~al 907 (934)
. ++..++.+++.+ . +|++.+++ .++...... ...+...||.+++.+++
T Consensus 177 ~i~~~~l~~i~~~s-~----Gd~R~ain-----~Lq~~~~~~---------~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 177 KLSPNAEKALIELS-N----GDMRRVLN-----VLQSCKATL---------DNPDEDEISDDVIYECC 225 (227)
T ss_dssp CBCHHHHHHHHHHH-T----TCHHHHHH-----HTTTTTTTT---------CSSSCCCBCHHHHHHHT
T ss_pred cCCHHHHHHHHHHc-C----CcHHHHHH-----HHHHHHHhc---------CCCCCCeeCHHHHHHHh
Confidence 2 223367777773 3 36655543 111111111 11233468999988876
No 32
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.24 E-value=2.3e-11 Score=126.49 Aligned_cols=153 Identities=17% Similarity=0.268 Sum_probs=100.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCc------------------------EEEecCccccccccchhhhhhHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLN------------------------FLSVKGPELINMYIGESEKNVRDIFQKA 739 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~------------------------~i~v~~~~l~~~~~Gese~~v~~lf~~A 739 (934)
+..+|||||||+|||++|++++++++.+ ++.++.++.. .-..++++++.+
T Consensus 34 ~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~ 107 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRT------KVEDTRDLLDNV 107 (239)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSC
T ss_pred CeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCCeEEEecchhcC------CHHHHHHHHHHH
Confidence 4569999999999999999999886432 3333332110 112356666665
Q ss_pred Hh----CCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCccee
Q 002337 740 RS----ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 815 (934)
Q Consensus 740 ~~----~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~ 815 (934)
.. ....|++|||+|.+. ....+.|+..|+.. ..++.+|++||.++.+.+++++ |+ ..
T Consensus 108 ~~~~~~~~~kviiIde~d~l~-------------~~~q~~Llk~lE~~---~~~~~~il~tn~~~~i~~~i~S--Rc-~~ 168 (239)
T d1njfa_ 108 QYAPARGRFKVYLIDEVHMLS-------------RHSFNALLKTLEEP---PEHVKFLLATTDPQKLPVTILS--RC-LQ 168 (239)
T ss_dssp CCSCSSSSSEEEEEETGGGSC-------------HHHHHHHHHHHHSC---CTTEEEEEEESCGGGSCHHHHT--TS-EE
T ss_pred HhccccCCCEEEEEECcccCC-------------HHHHHHHHHHHhcC---CCCeEEEEEcCCccccChhHhh--hh-cc
Confidence 32 234599999999984 23456677777753 3567888899999999999999 88 56
Q ss_pred eeecCCCCHHHHHHHHHHHHhcCCC-CcCCCHHHHHhhCCCCCCHHHHHHHHH
Q 002337 816 LYVGVNSDVSYRERVLKALTRKFKL-LEDVSLYSIAKKCPPNFTGADMYALCA 867 (934)
Q Consensus 816 i~v~~Pp~~~~r~~Il~~~~~~~~~-~~~~~l~~la~~~t~g~sgaDl~~l~~ 867 (934)
+.++. ++.++-..++....++... .++..++.++..+ . +|++.+++
T Consensus 169 i~~~~-~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s-~----Gd~R~ain 215 (239)
T d1njfa_ 169 FHLKA-LDVEQIRHQLEHILNEEHIAHEPRALQLLARAA-E----GSLRDALS 215 (239)
T ss_dssp EECCC-CCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHT-T----TCHHHHHH
T ss_pred ccccc-CcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHc-C----CCHHHHHH
Confidence 77774 6666666666655554332 1223366777763 3 35555443
No 33
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.23 E-value=4.8e-11 Score=122.50 Aligned_cols=168 Identities=15% Similarity=0.206 Sum_probs=108.0
Q ss_pred hHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCC-----cEEEEecCccccccccchHHHHHH
Q 002337 373 GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI-----HVVEYSCHNLMASSERKTSAALAQ 447 (934)
Q Consensus 373 ~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~-----~~~~I~~~~L~~~~~g~~e~~L~~ 447 (934)
++.++.|...+..-. ..++||+||||+||||+++++|++++. .+.+.++++..+............
T Consensus 20 ~~~~~~L~~~i~~~~---------~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 90 (227)
T d1sxjc2 20 NEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFA 90 (227)
T ss_dssp HHHHHHHHHHHHTTC---------CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHcCC---------CCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchhhcc
Confidence 466777777664211 124899999999999999999999753 356666665433211111111001
Q ss_pred HHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEE
Q 002337 448 AFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLV 527 (934)
Q Consensus 448 ~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVI 527 (934)
.+.........+++|||+|.+.. .....|...++. ....++++
T Consensus 91 ~~~~~~~~~~kiiiiDe~d~~~~----------------~~~~~Ll~~le~---------------------~~~~~~~~ 133 (227)
T d1sxjc2 91 STRQIFSKGFKLIILDEADAMTN----------------AAQNALRRVIER---------------------YTKNTRFC 133 (227)
T ss_dssp HBCCSSSCSCEEEEETTGGGSCH----------------HHHHHHHHHHHH---------------------TTTTEEEE
T ss_pred ccccccCCCeEEEEEeccccchh----------------hHHHHHHHHhhh---------------------cccceeec
Confidence 01111122346999999997754 112222233221 14567888
Q ss_pred EecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCC
Q 002337 528 AAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG 591 (934)
Q Consensus 528 atTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~G 591 (934)
.+||.+..+++.+++|+. .+.+.+|+..+...++...+..... .. .+..++.+++.+.|
T Consensus 134 ~~~~~~~~i~~~i~sr~~-~i~~~~~~~~~i~~~l~~I~~~e~i---~i-~~~~l~~i~~~s~G 192 (227)
T d1sxjc2 134 VLANYAHKLTPALLSQCT-RFRFQPLPQEAIERRIANVLVHEKL---KL-SPNAEKALIELSNG 192 (227)
T ss_dssp EEESCGGGSCHHHHTTSE-EEECCCCCHHHHHHHHHHHHHTTTC---CB-CHHHHHHHHHHHTT
T ss_pred cccCcHHHhHHHHHHHHh-hhccccccccccccccccccccccc---cC-CHHHHHHHHHHcCC
Confidence 999999999999999985 8999999999999999877654332 22 24567888888776
No 34
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.22 E-value=5.6e-12 Score=125.87 Aligned_cols=136 Identities=26% Similarity=0.442 Sum_probs=98.5
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc----------CCcEEEecCccccc--cccchhhhhhHHHHHHHHhCC-CcEEE
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC----------SLNFLSVKGPELIN--MYIGESEKNVRDIFQKARSAR-PCVIF 748 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~----------~~~~i~v~~~~l~~--~~~Gese~~v~~lf~~A~~~~-p~vlf 748 (934)
+...+++|+||||+|||+++..+|... +.++++++...++. +|.|+-|..++.+++.+.... ..|||
T Consensus 41 ~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILf 120 (195)
T d1jbka_ 41 RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 120 (195)
T ss_dssp SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEE
T ss_pred cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 345789999999999999999999754 57899999998884 578999999999999886654 67999
Q ss_pred eccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCC-----CCChhhhCCCCcceeeeecCCCC
Q 002337 749 FDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD-----LIDPALLRPGRFDKLLYVGVNSD 823 (934)
Q Consensus 749 iDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~-----~lD~allrpGRfd~~i~v~~Pp~ 823 (934)
|||++.+.....+.+. .. ...++...|. ...+.+||||...+ .-|+||.| ||. .|.+.- |+
T Consensus 121 IDeih~l~~~g~~~g~-~d-~~~~Lkp~L~--------rg~l~~IgatT~eey~~~~e~d~aL~r--rF~-~I~V~E-p~ 186 (195)
T d1jbka_ 121 IDELHTMVGAGKADGA-MD-AGNMLKPALA--------RGELHCVGATTLDEYRQYIEKDAALER--RFQ-KVFVAE-PS 186 (195)
T ss_dssp EETGGGGTT------C-CC-CHHHHHHHHH--------TTSCCEEEEECHHHHHHHTTTCHHHHT--TEE-EEECCC-CC
T ss_pred cchHHHHhcCCCCCCc-cc-HHHHHHHHHh--------CCCceEEecCCHHHHHHHHHcCHHHHh--cCC-EeecCC-CC
Confidence 9999999865432221 11 2344444443 24577888886332 55999999 997 566664 67
Q ss_pred HHHHHHHH
Q 002337 824 VSYRERVL 831 (934)
Q Consensus 824 ~~~r~~Il 831 (934)
.++-..||
T Consensus 187 ~e~t~~IL 194 (195)
T d1jbka_ 187 VEDTIAIL 194 (195)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 77666554
No 35
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.22 E-value=3.9e-11 Score=129.91 Aligned_cols=208 Identities=16% Similarity=0.293 Sum_probs=133.4
Q ss_pred hhcCCHHHHHHHHHhhhcccccccCCCCCccchhHHhhcCCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccc
Q 002337 641 TQVMGKEDLVKAMERSKKRNASALGAPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720 (934)
Q Consensus 641 ~~~i~~ed~~~aL~~~k~~~~~~i~~pk~pl~~~~~~~~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l 720 (934)
..+++++...+.+..........+..+ -++...+||+||||+|||.+|+++|..++.+|+.++++++
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l~~~-------------~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~ 88 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGLGHE-------------HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY 88 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTCSCT-------------TSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGC
T ss_pred CeecChHHHHHHHHHHHHHHHccCCCC-------------CCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccc
Confidence 456777776666554322111112111 1233468999999999999999999999999999999877
Q ss_pred ccc------------ccchhhhhhHHHHHHHHhCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccC------
Q 002337 721 INM------------YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG------ 782 (934)
Q Consensus 721 ~~~------------~~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg------ 782 (934)
... |+|..+.. .+....+....+|++|||+|...+ .+.+.||..+|.
T Consensus 89 ~~~~~~~~l~g~~~gy~g~~~~~--~l~~~~~~~~~~vvl~DeieKa~~-------------~V~~~lLqild~G~ltd~ 153 (315)
T d1r6bx3 89 MERHTVSRLIGAPPGYVGFDQGG--LLTDAVIKHPHAVLLLDEIEKAHP-------------DVFNILLQVMDNGTLTDN 153 (315)
T ss_dssp SSSSCCSSSCCCCSCSHHHHHTT--HHHHHHHHCSSEEEEEETGGGSCH-------------HHHHHHHHHHHHSEEEET
T ss_pred cchhhhhhhcccCCCccccccCC--hhhHHHHhCccchhhhcccccccc-------------hHhhhhHHhhccceecCC
Confidence 432 33333322 244455667779999999999853 245555554432
Q ss_pred C--cCCCCCEEEEEEcCCCC-------------------------CCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHH
Q 002337 783 L--NDSSQDLFIIGASNRPD-------------------------LIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 835 (934)
Q Consensus 783 ~--~~~~~~v~vI~aTNrp~-------------------------~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~ 835 (934)
. .....+.++|.|||-.. .+.|+++. |||..+.+. |.+.+...+|+...+
T Consensus 154 ~Gr~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~ii~f~-~l~~~~~~~I~~~~l 230 (315)
T d1r6bx3 154 NGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN--RLDNIIWFD-HLSTDVIHQVVDKFI 230 (315)
T ss_dssp TTEEEECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHT--TCSEEEECC-CCCHHHHHHHHHHHH
T ss_pred CCCccCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHh--hhhhhhccc-chhhhHHHHHHHHHH
Confidence 1 11245788999999431 25678887 999999988 478888888876665
Q ss_pred hcC-------CCCc---CCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 002337 836 RKF-------KLLE---DVSLYSIAKK-CPPNFTGADMYALCADAWFHAAKRKVL 879 (934)
Q Consensus 836 ~~~-------~~~~---~~~l~~la~~-~t~g~sgaDl~~l~~~A~~~A~~r~~~ 879 (934)
..+ ...- +-.+..+++. +...|-++.|+.++++-....+.+.+.
T Consensus 231 ~~~~~~l~~~~i~l~~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~~i~~~la~~il 285 (315)
T d1r6bx3 231 VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 285 (315)
T ss_dssp HHHHHHHHHTTEEEEECHHHHHHHHHHHCBTTTBTTTHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHhcCcchhhHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 432 1111 1124556554 345566678888887666666555543
No 36
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.21 E-value=3.9e-11 Score=132.95 Aligned_cols=199 Identities=18% Similarity=0.258 Sum_probs=122.6
Q ss_pred CcCCchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHh----------CCcEEEEecCcccc--
Q 002337 368 FVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL----------GIHVVEYSCHNLMA-- 435 (934)
Q Consensus 368 ~~~~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~el----------g~~~~~I~~~~L~~-- 435 (934)
.+|.+. .++++.+++.- +...+++|+|+||+|||++++.+|..+ +.+++.++...+++
T Consensus 24 ~~gr~~-ei~~~~~~L~r---------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~ 93 (387)
T d1qvra2 24 VIGRDE-EIRRVIQILLR---------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGA 93 (387)
T ss_dssp CCSCHH-HHHHHHHHHHC---------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-------
T ss_pred CcCcHH-HHHHHHHHHhc---------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhccc
Confidence 345544 45566665531 223458999999999999999999875 46799999999987
Q ss_pred ccccchHHHHHHHHHHhhcC-CCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchh
Q 002337 436 SSERKTSAALAQAFNTAQSY-SPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514 (934)
Q Consensus 436 ~~~g~~e~~L~~~f~~A~~~-~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~ 514 (934)
++.|+.+..+..++..+... .+.||||||++.|....... ....+..+|+.++.
T Consensus 94 ~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~--------g~~d~a~~Lkp~L~----------------- 148 (387)
T d1qvra2 94 KYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAE--------GAVDAGNMLKPALA----------------- 148 (387)
T ss_dssp ----CHHHHHHHHHHHHHTTCSSEEEEECCC---------------------------HHHHH-----------------
T ss_pred CcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCC--------CcccHHHHHHHHHh-----------------
Confidence 45689999999999888765 46899999999997532111 12234555555543
Q ss_pred hhhhhhcccEEEEEecCCCC----CCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhc-
Q 002337 515 EIEKICRQQVLLVAAADSSE----GLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQT- 589 (934)
Q Consensus 515 ~~~~~~~~~ViVIatTn~~~----~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t- 589 (934)
++.+-+||+|+.-+ .=|++|.|||. .|.+..|+.++-..||+.+.......|.-.-.+..+...+..+
T Consensus 149 ------rg~~~~I~~tT~~ey~~~e~d~al~rrF~-~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ 221 (387)
T d1qvra2 149 ------RGELRLIGATTLDEYREIEKDPALERRFQ-PVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSH 221 (387)
T ss_dssp ------TTCCCEEEEECHHHHHHHTTCTTTCSCCC-CEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHH
T ss_pred ------CCCcceeeecCHHHHHHhcccHHHHHhcc-cccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcc
Confidence 67788999986321 23789999996 9999999999999999987655543332112244454444433
Q ss_pred ----CCCChHHHHHHHHHHHHHH
Q 002337 590 ----SGFMPRDLHALVADAGANL 608 (934)
Q Consensus 590 ----~Gfv~~DL~~L~~~A~~~a 608 (934)
..+.|.....|+.+|+...
T Consensus 222 ryi~~r~~PdKAidlld~a~a~~ 244 (387)
T d1qvra2 222 RYITERRLPDKAIDLIDEAAARL 244 (387)
T ss_dssp HHCCSSCTHHHHHHHHHHHHHHH
T ss_pred cccccccChhhHHHHHHHHHHHH
Confidence 3477777777777776544
No 37
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.20 E-value=1.6e-10 Score=121.36 Aligned_cols=185 Identities=11% Similarity=0.079 Sum_probs=110.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhC---------CcEEEEecCccccc----------------cccchHHHHHHHHHHh
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLG---------IHVVEYSCHNLMAS----------------SERKTSAALAQAFNTA 452 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg---------~~~~~I~~~~L~~~----------------~~g~~e~~L~~~f~~A 452 (934)
..++|+||||||||++++++++++. ..+..+++...... ..+.....+...+...
T Consensus 47 ~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 126 (287)
T d1w5sa2 47 MIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDN 126 (287)
T ss_dssp EEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHH
T ss_pred eEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHH
Confidence 3567889999999999999999872 44556666543221 1122333333333322
Q ss_pred h--cCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEec
Q 002337 453 Q--SYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAA 530 (934)
Q Consensus 453 ~--~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatT 530 (934)
. ...+.++++|++|.+.... ....++...+..+.+.+. .......+.+|+.+
T Consensus 127 ~~~~~~~~~~iide~d~l~~~~----------~~~~~~~~~l~~l~~~l~----------------~~~~~~~~~~i~i~ 180 (287)
T d1w5sa2 127 LYVENHYLLVILDEFQSMLSSP----------RIAAEDLYTLLRVHEEIP----------------SRDGVNRIGFLLVA 180 (287)
T ss_dssp HHHHTCEEEEEEESTHHHHSCT----------TSCHHHHHHHHTHHHHSC----------------CTTSCCBEEEEEEE
T ss_pred HHhccCccccceeEEEEecccc----------ccchhHHHHHHHHHHhcc----------------hhhcccceeEEeec
Confidence 2 3356788999999886521 111223333322221110 01124455666666
Q ss_pred CCCCC------CChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCC-----CChHHHHH
Q 002337 531 DSSEG------LPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG-----FMPRDLHA 599 (934)
Q Consensus 531 n~~~~------Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~G-----fv~~DL~~ 599 (934)
+..+. ..+.+.+||...+.+++|+.++..+|++..++.. ...+.-.+..++.+|+.+.+ -.+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~--~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~ 258 (287)
T d1w5sa2 181 SDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELG--LRDTVWEPRHLELISDVYGEDKGGDGSARRAIV 258 (287)
T ss_dssp EETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHH--BCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHH
T ss_pred ccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHh--hccCCCCHHHHHHHHHHHhccccCCCCHHHHHH
Confidence 55432 3467778888999999999999999999876432 11122235667777777653 24556666
Q ss_pred HHHHHHHHHHH
Q 002337 600 LVADAGANLIR 610 (934)
Q Consensus 600 L~~~A~~~ai~ 610 (934)
++++|...|..
T Consensus 259 ~l~~a~~~A~~ 269 (287)
T d1w5sa2 259 ALKMACEMAEA 269 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77887766543
No 38
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.19 E-value=1.1e-10 Score=121.39 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=55.7
Q ss_pred cccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHH
Q 002337 521 RQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHAL 600 (934)
Q Consensus 521 ~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L 600 (934)
..++.+|++||.++.+++.+++|| ..|++++|+.++..++++..++.... ....+..++.++..+.| |++..
T Consensus 159 ~~~~~~Il~tn~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~e~~---~~~~~~~l~~i~~~s~G----d~R~a 230 (252)
T d1sxje2 159 SKNIRLIMVCDSMSPIIAPIKSQC-LLIRCPAPSDSEISTILSDVVTNERI---QLETKDILKRIAQASNG----NLRVS 230 (252)
T ss_dssp TTTEEEEEEESCSCSSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTC---EECCSHHHHHHHHHHTT----CHHHH
T ss_pred cccccceeeeccccchhhhhhcch-heeeecccchhhHHHHHHHHHHHcCC---CCCcHHHHHHHHHHcCC----cHHHH
Confidence 566788999999999999999998 48999999999999999887754322 12234567888888776 55543
No 39
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.18 E-value=3.3e-10 Score=117.52 Aligned_cols=163 Identities=17% Similarity=0.225 Sum_probs=110.8
Q ss_pred hHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCc------------------------EEEE
Q 002337 373 GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIH------------------------VVEY 428 (934)
Q Consensus 373 ~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~------------------------~~~I 428 (934)
.++.+.|...+.. -+.+.++||+||||+|||++|++++++++.+ ++++
T Consensus 18 ~~~~~~L~~~i~~--------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 89 (239)
T d1njfa_ 18 EHVLTALANGLSL--------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEI 89 (239)
T ss_dssp HHHHHHHHHHHHT--------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEEE
T ss_pred HHHHHHHHHHHHc--------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCCeEEEe
Confidence 4566777666532 1334569999999999999999999998432 3444
Q ss_pred ecCccccccccchHHHHHHHHHHhhc----CCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccc
Q 002337 429 SCHNLMASSERKTSAALAQAFNTAQS----YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504 (934)
Q Consensus 429 ~~~~L~~~~~g~~e~~L~~~f~~A~~----~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~ 504 (934)
+..+ ......++.+++.+.. ....+++|||+|.+.. +....|...++.
T Consensus 90 ~~~~------~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~----------------~~q~~Llk~lE~------ 141 (239)
T d1njfa_ 90 DAAS------RTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSR----------------HSFNALLKTLEE------ 141 (239)
T ss_dssp ETTC------SSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCH----------------HHHHHHHHHHHS------
T ss_pred cchh------cCCHHHHHHHHHHHHhccccCCCEEEEEECcccCCH----------------HHHHHHHHHHhc------
Confidence 4332 1123445666665532 1346999999998754 222333344332
Q ss_pred cccCCCCchhhhhhhhcccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHH
Q 002337 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584 (934)
Q Consensus 505 ~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~ 584 (934)
...++.+|.+||++..+.+++++|+. .+.++.|+.++..+++...+..... .. .+..++.
T Consensus 142 ---------------~~~~~~~il~tn~~~~i~~~i~SRc~-~i~~~~~~~~~i~~~l~~i~~~e~~---~~-~~~~l~~ 201 (239)
T d1njfa_ 142 ---------------PPEHVKFLLATTDPQKLPVTILSRCL-QFHLKALDVEQIRHQLEHILNEEHI---AH-EPRALQL 201 (239)
T ss_dssp ---------------CCTTEEEEEEESCGGGSCHHHHTTSE-EEECCCCCHHHHHHHHHHHHHHHTC---CB-CHHHHHH
T ss_pred ---------------CCCCeEEEEEcCCccccChhHhhhhc-ccccccCcHHHhhhHHHHHHhhhcc---CC-CHHHHHH
Confidence 14667899999999999999999994 8999999999998888877654322 22 2456778
Q ss_pred HHhhcCC
Q 002337 585 IIGQTSG 591 (934)
Q Consensus 585 la~~t~G 591 (934)
++..+.|
T Consensus 202 i~~~s~G 208 (239)
T d1njfa_ 202 LARAAEG 208 (239)
T ss_dssp HHHHTTT
T ss_pred HHHHcCC
Confidence 8887765
No 40
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.18 E-value=1.2e-10 Score=119.85 Aligned_cols=185 Identities=19% Similarity=0.156 Sum_probs=112.5
Q ss_pred CcceecCCCCCcchHHHHHHHHHc------CCcEEEecCccccccc-cchhhhhh---------HHHHHHHHhCCCcEEE
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC------SLNFLSVKGPELINMY-IGESEKNV---------RDIFQKARSARPCVIF 748 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~------~~~~i~v~~~~l~~~~-~Gese~~v---------~~lf~~A~~~~p~vlf 748 (934)
.+++|+||||+|||++++++|+++ ....+.+++++..+.. ..+.-+.. ...+.........|||
T Consensus 34 ~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vii 113 (237)
T d1sxjd2 34 PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIII 113 (237)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEE
T ss_pred CeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEE
Confidence 459999999999999999999985 4566777665442211 11110000 0111111222335999
Q ss_pred eccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHH
Q 002337 749 FDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 828 (934)
Q Consensus 749 iDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~ 828 (934)
|||+|.+... ..+.++..++. ......+|.+++..+.+.+++++ |+ ..+.|+ |++.++..
T Consensus 114 iDe~d~l~~~-------------~~~~l~~~~~~---~~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~-~~~~~~~~ 173 (237)
T d1sxjd2 114 LDEADSMTAD-------------AQSALRRTMET---YSGVTRFCLICNYVTRIIDPLAS--QC-SKFRFK-ALDASNAI 173 (237)
T ss_dssp ETTGGGSCHH-------------HHHHHHHHHHH---TTTTEEEEEEESCGGGSCHHHHH--HS-EEEECC-CCCHHHHH
T ss_pred EecccccCHH-------------HHHHHhhcccc---ccccccccccccccccccccccc--hh-hhhccc-cccccccc
Confidence 9999998632 12222222222 23456777888899999999998 88 578888 58889999
Q ss_pred HHHHHHHhcCCCC-cCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccCcccccHHHHHHHH
Q 002337 829 RVLKALTRKFKLL-EDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSDSNSDSSRIDQADSVVVEYDDFVKVL 907 (934)
Q Consensus 829 ~Il~~~~~~~~~~-~~~~l~~la~~~t~g~sgaDl~~l~~~A~~~A~~r~~~~~~~~~~~~~~~~~~~~~it~~df~~al 907 (934)
.+|+..+++..+. .+..+..+|+.+ .| ..+..-++++.|+..+.... +...||.+++++++
T Consensus 174 ~~L~~i~~~e~i~i~~~~l~~ia~~s-~g-d~R~ai~~L~~~~~~~~~~~----------------~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 174 DRLRFISEQENVKCDDGVLERILDIS-AG-DLRRGITLLQSASKGAQYLG----------------DGKNITSTQVEELA 235 (237)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHT-SS-CHHHHHHHHHHTHHHHHHHC----------------SCCCCCHHHHHHHH
T ss_pred hhhhhhhhhhcCcCCHHHHHHHHHHc-CC-CHHHHHHHHHHHHHhchhcC----------------CCCccCHHHHHHhh
Confidence 9998888765542 222367788873 33 33333344444443332210 12258888888775
No 41
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.17 E-value=1.7e-09 Score=112.75 Aligned_cols=216 Identities=17% Similarity=0.155 Sum_probs=132.0
Q ss_pred HHHHHHHHHhhccCC-CccccCCCCceEEEECCCCCcHHHHHHHHHHHh----CCcEEEEecCccccc------------
Q 002337 374 DTVKILASILAPTLC-PSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL----GIHVVEYSCHNLMAS------------ 436 (934)
Q Consensus 374 ~~~~~L~~il~p~l~-p~~~~~~~~~~VLL~GppGtGKTtLaralA~el----g~~~~~I~~~~L~~~------------ 436 (934)
...+.+.+.+.+.+. ++ ..+.+++|+||||||||++++++++.+ +..++.++|......
T Consensus 23 ~ei~~l~~~l~~~l~~~~----~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (276)
T d1fnna2 23 QQLQQLDILLGNWLRNPG----HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLN 98 (276)
T ss_dssp HHHHHHHHHHHHHHHSTT----SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCC----CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhhhhhhhhhHHhhh
Confidence 345666666655432 22 345689999999999999999999998 356777777643221
Q ss_pred ----cccchH-HHHHHHHHHhh-cCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCC
Q 002337 437 ----SERKTS-AALAQAFNTAQ-SYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGY 510 (934)
Q Consensus 437 ----~~g~~e-~~L~~~f~~A~-~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~ 510 (934)
..+... ........... ...+.++++|++|.+... ....+..+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----------------~~~~~~~~~~~------------ 150 (276)
T d1fnna2 99 IPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPD----------------ILSTFIRLGQE------------ 150 (276)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHH----------------HHHHHHHHTTC------------
T ss_pred hhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhh----------------hhhhHHHHHhc------------
Confidence 111112 22233333332 335778889998866541 11112222211
Q ss_pred CchhhhhhhhcccEEEEEecCCC---CCCChhhhccc-ceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHH
Q 002337 511 FPVKEIEKICRQQVLLVAAADSS---EGLPPTIRRCF-SHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDII 586 (934)
Q Consensus 511 ~~~~~~~~~~~~~ViVIatTn~~---~~Ld~aLrrrF-~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la 586 (934)
........+.+|++++.. +.+++.+.+|+ ...+.+++|+.+++.+|++..++... ......+..++.++
T Consensus 151 -----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~--~~~~~~~~~l~~ia 223 (276)
T d1fnna2 151 -----ADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGL--AEGSYSEDILQMIA 223 (276)
T ss_dssp -----HHHHSSCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHB--CTTSSCHHHHHHHH
T ss_pred -----cccccccceEEeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhc--ccccccHHHHHHHH
Confidence 112235667888888874 45788887764 45799999999999999998765321 11222355667777
Q ss_pred hhcCC-----C---ChHHHHHHHHHHHHHHHHhhcccccCCCCCchhhhhhhhccCcchhhhhhcCCHHHHHHHHHhh
Q 002337 587 GQTSG-----F---MPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERS 656 (934)
Q Consensus 587 ~~t~G-----f---v~~DL~~L~~~A~~~ai~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~ed~~~aL~~~ 656 (934)
..+.. . .++.+..+++.|...|.... ...++.+|+.+|++++
T Consensus 224 ~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~----------------------------~~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 224 DITGAQTPLDTNRGDARLAIDILYRSAYAAQQNG----------------------------RKHIAPEDVRKSSKEV 273 (276)
T ss_dssp HHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTT----------------------------CSSCCHHHHHHHHHHH
T ss_pred HHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcC----------------------------CCCcCHHHHHHHHHHH
Confidence 66543 2 23455667777766554321 2357889998888765
No 42
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.16 E-value=4.3e-13 Score=147.96 Aligned_cols=178 Identities=11% Similarity=0.025 Sum_probs=102.6
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcccccc-ccchHHHHHHHHHHhh------cCCCEEEEEcchh
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS-ERKTSAALAQAFNTAQ------SYSPTILLLRDFD 466 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~-~g~~e~~L~~~f~~A~------~~~P~IL~IDEID 466 (934)
.+.++++||+||||||||++++++|+.+|.+++.+++++..+.+ .+........+|+.+. ...|+++++||+|
T Consensus 151 ~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD 230 (362)
T d1svma_ 151 IPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLD 230 (362)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHH
T ss_pred CCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehHh
Confidence 45567899999999999999999999999999999998755432 1111111111222221 1235555555555
Q ss_pred hccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCCCCChhhhc-ccc
Q 002337 467 VFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRR-CFS 545 (934)
Q Consensus 467 ~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aLrr-rF~ 545 (934)
.|....+..... .++ .............+|+|||... .+.++. ||+
T Consensus 231 ~l~~~~dg~~~~----------------~~~---------------~~~~~~~~~~~~p~i~ttN~~~--~~~~r~~Rf~ 277 (362)
T d1svma_ 231 NLRDYLDGSVKV----------------NLE---------------KKHLNKRTQIFPPGIVTMNEYS--VPKTLQARFV 277 (362)
T ss_dssp TTHHHHHCSSCE----------------EEC---------------CSSSCCEEECCCCEEEEECSCC--CCHHHHTTEE
T ss_pred hcccccCCcchh----------------hhh---------------hhhhchhhhccCCceeeccccc--ccccccccCc
Confidence 544321100000 000 0000000001113678898642 333333 899
Q ss_pred eEEEcCCCCHHHHH-HHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHh
Q 002337 546 HEISMGPLTEQQRV-EMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK 611 (934)
Q Consensus 546 ~eI~i~~Pde~~R~-~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L~~~A~~~ai~r 611 (934)
+.+.+..|+...|. +++..+++.... ....+.++..+.+++++|+..+++++.....++
T Consensus 278 ~~i~~~~~~~~~~~~~~l~~i~~~~~l-------~~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~ 337 (362)
T d1svma_ 278 KQIDFRPKDYLKHCLERSEFLLEKRII-------QSGIALLLMLIWYRPVAEFAQSIQSRIVEWKER 337 (362)
T ss_dssp EEEECCCCHHHHHHHHTCTHHHHTTCT-------TCHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHH
T ss_pred eEEeecCCCcHHHHHHHHHHHhcccCC-------CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999988876664 444444433211 122355777788999999999999887666544
No 43
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.15 E-value=6.6e-11 Score=123.11 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=68.5
Q ss_pred CcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCC
Q 002337 744 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 823 (934)
Q Consensus 744 p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~ 823 (934)
..+++|||+|.+... ..+.|+..++.. ..++.+|++||.++.+++++++ |+ ..|+|+ ||+
T Consensus 132 ~~iiiide~d~l~~~-------------~~~~l~~~~e~~---~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~-~~~ 191 (252)
T d1sxje2 132 YKCVIINEANSLTKD-------------AQAALRRTMEKY---SKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCP-APS 191 (252)
T ss_dssp CEEEEEECTTSSCHH-------------HHHHHHHHHHHS---TTTEEEEEEESCSCSSCHHHHT--TS-EEEECC-CCC
T ss_pred ceEEEeccccccccc-------------cchhhhcccccc---cccccceeeeccccchhhhhhc--ch-heeeec-ccc
Confidence 459999999998421 233344444422 3567888999999999999998 99 588998 588
Q ss_pred HHHHHHHHHHHHhcCC--CCcCCCHHHHHhhCCCCCCHHHHHHHHH
Q 002337 824 VSYRERVLKALTRKFK--LLEDVSLYSIAKKCPPNFTGADMYALCA 867 (934)
Q Consensus 824 ~~~r~~Il~~~~~~~~--~~~~~~l~~la~~~t~g~sgaDl~~l~~ 867 (934)
.++..++++..+++.. ...+.-+..++..+ . +|++.+++
T Consensus 192 ~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s-~----Gd~R~ai~ 232 (252)
T d1sxje2 192 DSEISTILSDVVTNERIQLETKDILKRIAQAS-N----GNLRVSLL 232 (252)
T ss_dssp HHHHHHHHHHHHHHHTCEECCSHHHHHHHHHH-T----TCHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHc-C----CcHHHHHH
Confidence 8888888887776533 33333356777763 3 47776654
No 44
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.13 E-value=3.1e-10 Score=116.28 Aligned_cols=162 Identities=17% Similarity=0.221 Sum_probs=109.0
Q ss_pred hHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCC-----cEEEEecCccccccccchHHHHHH
Q 002337 373 GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI-----HVVEYSCHNLMASSERKTSAALAQ 447 (934)
Q Consensus 373 ~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~-----~~~~I~~~~L~~~~~g~~e~~L~~ 447 (934)
++.++.|..++.--. ..++||+|||||||||+|+.+|++++. +++++++++..+ ...+..
T Consensus 21 ~~~~~~L~~~~~~~~---------~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~------~~~i~~ 85 (224)
T d1sxjb2 21 KETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRG------IDVVRN 85 (224)
T ss_dssp THHHHHHHHHHHSCC---------CCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCS------HHHHHT
T ss_pred HHHHHHHHHHHHcCC---------CCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCC------ceehhh
Confidence 356777777664211 124899999999999999999999863 478888775432 122222
Q ss_pred HHHH---hh----cCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhh
Q 002337 448 AFNT---AQ----SYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKIC 520 (934)
Q Consensus 448 ~f~~---A~----~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~ 520 (934)
.+.. .. .....++++||+|.+... ....|...++ ..
T Consensus 86 ~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~----------------~~~~ll~~~e---------------------~~ 128 (224)
T d1sxjb2 86 QIKHFAQKKLHLPPGKHKIVILDEADSMTAG----------------AQQALRRTME---------------------LY 128 (224)
T ss_dssp HHHHHHHBCCCCCTTCCEEEEEESGGGSCHH----------------HHHTTHHHHH---------------------HT
T ss_pred HHHHHHHhhccCCCcceEEEEEecccccchh----------------HHHHHhhhcc---------------------cc
Confidence 2221 11 123569999999987651 1112222211 12
Q ss_pred cccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCC
Q 002337 521 RQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG 591 (934)
Q Consensus 521 ~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~G 591 (934)
.....++.+|+....+.+++++|+. .+.+++|+.++...++...++.... +.+ +..++.++..+.|
T Consensus 129 ~~~~~~i~~~~~~~~i~~~l~sr~~-~i~~~~~~~~~i~~~l~~i~~~e~~---~i~-~~~l~~I~~~s~G 194 (224)
T d1sxjb2 129 SNSTRFAFACNQSNKIIEPLQSQCA-ILRYSKLSDEDVLKRLLQIIKLEDV---KYT-NDGLEAIIFTAEG 194 (224)
T ss_dssp TTTEEEEEEESCGGGSCHHHHTTSE-EEECCCCCHHHHHHHHHHHHHHHTC---CBC-HHHHHHHHHHHTT
T ss_pred ccceeeeeccCchhhhhhHHHHHHH-HhhhcccchhhhHHHHHHHHHhccc---CCC-HHHHHHHHHHcCC
Confidence 5567888889999999999999995 8999999999999999887754332 222 4456778777664
No 45
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.12 E-value=6.4e-10 Score=114.32 Aligned_cols=149 Identities=13% Similarity=0.197 Sum_probs=99.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh------CCcEEEEecCccccccccchHHHHHHH------------HHHhhcCCCEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL------GIHVVEYSCHNLMASSERKTSAALAQA------------FNTAQSYSPTIL 460 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el------g~~~~~I~~~~L~~~~~g~~e~~L~~~------------f~~A~~~~P~IL 460 (934)
+++|+||||+||||+++++|+++ ......+++....+... ....+... ..........++
T Consensus 35 ~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 112 (237)
T d1sxjd2 35 HMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKII 112 (237)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHH--HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEE
T ss_pred eEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchH--HHHHHHHHhhhhhhhhhHHHHhhccccCceEE
Confidence 49999999999999999999996 46677777765433211 00111111 111112234599
Q ss_pred EEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCCCCChhh
Q 002337 461 LLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTI 540 (934)
Q Consensus 461 ~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aL 540 (934)
+|||+|.+... ....+..+++ .......+|.+++....+.+++
T Consensus 113 iiDe~d~l~~~----------------~~~~l~~~~~---------------------~~~~~~~~i~~~~~~~~~~~~l 155 (237)
T d1sxjd2 113 ILDEADSMTAD----------------AQSALRRTME---------------------TYSGVTRFCLICNYVTRIIDPL 155 (237)
T ss_dssp EETTGGGSCHH----------------HHHHHHHHHH---------------------HTTTTEEEEEEESCGGGSCHHH
T ss_pred EEecccccCHH----------------HHHHHhhccc---------------------cccccccccccccccccccccc
Confidence 99999987641 1112222221 1134566788888889999999
Q ss_pred hcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCC
Q 002337 541 RRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSG 591 (934)
Q Consensus 541 rrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~G 591 (934)
++|| ..+.+.+|+..+...+|+..+..... .. .+..++.+++.+.|
T Consensus 156 ~sr~-~~i~f~~~~~~~~~~~L~~i~~~e~i---~i-~~~~l~~ia~~s~g 201 (237)
T d1sxjd2 156 ASQC-SKFRFKALDASNAIDRLRFISEQENV---KC-DDGVLERILDISAG 201 (237)
T ss_dssp HHHS-EEEECCCCCHHHHHHHHHHHHHTTTC---CC-CHHHHHHHHHHTSS
T ss_pred cchh-hhhccccccccccchhhhhhhhhhcC---cC-CHHHHHHHHHHcCC
Confidence 9998 48999999999999999988765432 22 25667888888765
No 46
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.11 E-value=2.3e-10 Score=117.35 Aligned_cols=152 Identities=17% Similarity=0.160 Sum_probs=101.3
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCC-----cEEEecCccccccccchhhhhhHHHHHHHH-------hCCCcEEEeccc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSL-----NFLSVKGPELINMYIGESEKNVRDIFQKAR-------SARPCVIFFDEL 752 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~-----~~i~v~~~~l~~~~~Gese~~v~~lf~~A~-------~~~p~vlfiDEi 752 (934)
.++||+||||||||++|+++|++++. +++.+++++..+. ..++..+.... .....++++||+
T Consensus 37 ~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~ 110 (224)
T d1sxjb2 37 PHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEA 110 (224)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESG
T ss_pred CeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCc------eehhhHHHHHHHhhccCCCcceEEEEEecc
Confidence 36999999999999999999988753 4777777654321 22222222221 123469999999
Q ss_pred cccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecCCCCHHHHHHHHH
Q 002337 753 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 832 (934)
Q Consensus 753 d~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~ 832 (934)
|.+.. ...+.|+..++.. .....++.+||..+.+.+++++ |+ ..|.|+ ||+.++...++.
T Consensus 111 d~~~~-------------~~~~~ll~~~e~~---~~~~~~i~~~~~~~~i~~~l~s--r~-~~i~~~-~~~~~~i~~~l~ 170 (224)
T d1sxjb2 111 DSMTA-------------GAQQALRRTMELY---SNSTRFAFACNQSNKIIEPLQS--QC-AILRYS-KLSDEDVLKRLL 170 (224)
T ss_dssp GGSCH-------------HHHHTTHHHHHHT---TTTEEEEEEESCGGGSCHHHHT--TS-EEEECC-CCCHHHHHHHHH
T ss_pred cccch-------------hHHHHHhhhcccc---ccceeeeeccCchhhhhhHHHH--HH-HHhhhc-ccchhhhHHHHH
Confidence 98852 2334455555433 3467777888889999999999 88 468998 488888888888
Q ss_pred HHHhcCCCCcC-CCHHHHHhhCCCCCCHHHHHHHHH
Q 002337 833 ALTRKFKLLED-VSLYSIAKKCPPNFTGADMYALCA 867 (934)
Q Consensus 833 ~~~~~~~~~~~-~~l~~la~~~t~g~sgaDl~~l~~ 867 (934)
..+++.++.-+ -.+..++..+ ++|++.+++
T Consensus 171 ~i~~~e~~~i~~~~l~~I~~~s-----~Gd~R~ai~ 201 (224)
T d1sxjb2 171 QIIKLEDVKYTNDGLEAIIFTA-----EGDMRQAIN 201 (224)
T ss_dssp HHHHHHTCCBCHHHHHHHHHHH-----TTCHHHHHH
T ss_pred HHHHhcccCCCHHHHHHHHHHc-----CCcHHHHHH
Confidence 77765443222 2366777763 345555543
No 47
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.09 E-value=2.1e-10 Score=126.28 Aligned_cols=148 Identities=22% Similarity=0.349 Sum_probs=94.8
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccc-cccchhh-hhhHHHHHHH----HhCCCcEEEecccccc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN-MYIGESE-KNVRDIFQKA----RSARPCVIFFDELDSL 755 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~-~~~Gese-~~v~~lf~~A----~~~~p~vlfiDEid~l 755 (934)
.++.++||.||+|||||.+||++|..++.+|+.++++++.. .|+|... ..++++...+ +....+|++|||+|..
T Consensus 66 ~p~~niLfiGPTGvGKTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~ 145 (364)
T d1um8a_ 66 LSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKI 145 (364)
T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC
T ss_pred CCCcceeeeCCCCccHHHHHHHHHhhcccceeehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhh
Confidence 45789999999999999999999999999999999988865 3677543 3466665543 4456689999999999
Q ss_pred ccCCCCCCCCch-hHHHHHHhhhhhccCCcC----------CCCCEEEEEEcCC--------------------------
Q 002337 756 APARGASGDSGG-VMDRVVSQMLAEIDGLND----------SSQDLFIIGASNR-------------------------- 798 (934)
Q Consensus 756 ~~~r~~~~~~~~-~~~~v~~~lL~~ldg~~~----------~~~~v~vI~aTNr-------------------------- 798 (934)
.+......+... ....+.+.||..||+-.. ...+.++|.|+|-
T Consensus 146 ~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~ 225 (364)
T d1um8a_ 146 SRLSENRSITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGF 225 (364)
T ss_dssp --------------CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSC
T ss_pred ccccccccccccccchHHHHhhhhhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccc
Confidence 865432221111 123477888888885221 1234556656654
Q ss_pred -----------------------CCCCChhhhCCCCcceeeeecCCCCHHHHHHHHH
Q 002337 799 -----------------------PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 832 (934)
Q Consensus 799 -----------------------p~~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~ 832 (934)
+..+-|+++- |||..+.|. |-+.+.-.+|+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~g--Ri~~iv~f~-~L~~~~l~~Il~ 279 (364)
T d1um8a_ 226 TQEKMSKKEQEAILHLVQTHDLVTYGLIPELIG--RLPVLSTLD-SISLEAMVDILQ 279 (364)
T ss_dssp CCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHHT--TCCEEEECC-CCCHHHHHHHHH
T ss_pred cccccchhhhhhhhccccHHHHhhhhhHHHHHH--HhcchhhHh-hhhHHHHHHHHH
Confidence 1125677776 999999999 588888888875
No 48
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.06 E-value=2.5e-10 Score=116.48 Aligned_cols=165 Identities=15% Similarity=0.250 Sum_probs=108.6
Q ss_pred CcceecCCCCCcchHHHHHHHHHc---CCcEEEecCccccccccchhh-hhhHHHHHHHHhCCCcEEEeccccccccCCC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELINMYIGESE-KNVRDIFQKARSARPCVIFFDELDSLAPARG 760 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~~~~Gese-~~v~~lf~~A~~~~p~vlfiDEid~l~~~r~ 760 (934)
..++||||+|||||+|++|++++. +..+++++..++...+...-. ....+.++..+. ..+|+||++|.+..+..
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dll~iDDi~~i~~~~~ 114 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKS--VDLLLLDDVQFLSGKER 114 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHT--CSEEEEECGGGGTTCHH
T ss_pred CcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHHHHHHHHHHHHccchhhHHHHHhh--ccchhhhhhhhhcCchH
Confidence 358999999999999999999876 567888887777655433222 223344444443 36999999999974421
Q ss_pred CCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCC---ChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhc
Q 002337 761 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI---DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRK 837 (934)
Q Consensus 761 ~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~l---D~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~ 837 (934)
....+-.++.. ... .+.-+|+++...|..+ .|.|.+ ||...+.+.++|+.+.|.+|++...+.
T Consensus 115 --------~~~~lf~lin~---~~~-~~~~iiits~~~p~~l~~~~~dL~S--RL~~g~~~~i~p~d~~~~~iL~~~a~~ 180 (213)
T d1l8qa2 115 --------TQIEFFHIFNT---LYL-LEKQIILASDRHPQKLDGVSDRLVS--RFEGGILVEIELDNKTRFKIIKEKLKE 180 (213)
T ss_dssp --------HHHHHHHHHHH---HHH-TTCEEEEEESSCGGGCTTSCHHHHH--HHHTSEEEECCCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHH---Hhh-ccceEEEecCCcchhccccchHHHH--HhhCceEEEECCCcHHHHHHHHHHHHH
Confidence 12222233332 222 2445667677677544 588888 998877777767778899999888876
Q ss_pred CCCCcCC-CHHHHHhhCCCCCCHHHHHHHHHH
Q 002337 838 FKLLEDV-SLYSIAKKCPPNFTGADMYALCAD 868 (934)
Q Consensus 838 ~~~~~~~-~l~~la~~~t~g~sgaDl~~l~~~ 868 (934)
.++.-+. -+..+++++ . +-+||..+++.
T Consensus 181 rgl~l~~~v~~yl~~~~-~--~~R~L~~~l~~ 209 (213)
T d1l8qa2 181 FNLELRKEVIDYLLENT-K--NVREIEGKIKL 209 (213)
T ss_dssp TTCCCCHHHHHHHHHHC-S--SHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhc-C--cHHHHHHHHHH
Confidence 5543322 267778773 3 45777777654
No 49
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.06 E-value=9.1e-10 Score=118.96 Aligned_cols=207 Identities=14% Similarity=0.171 Sum_probs=126.1
Q ss_pred CchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcccccc------------c
Q 002337 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS------------E 438 (934)
Q Consensus 371 ~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~------------~ 438 (934)
.+++.++.+...+......-.-.-++...+||+||+|+|||.||+++|..++.+++.++++++.... .
T Consensus 26 GQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l~g~~~gy~ 105 (315)
T d1r6bx3 26 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 105 (315)
T ss_dssp SCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSCCCCSCSH
T ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhhcccCCCcc
Confidence 3445666666554322111001123445799999999999999999999999999999998765421 1
Q ss_pred cchHHHHHHHHHHhhcCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhh
Q 002337 439 RKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEK 518 (934)
Q Consensus 439 g~~e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~ 518 (934)
|..... .+......+..+++++||+|...+ .+...+.++++. |.+.......
T Consensus 106 g~~~~~--~l~~~~~~~~~~vvl~DeieKa~~----------------~V~~~lLqild~----------G~ltd~~Gr~ 157 (315)
T d1r6bx3 106 GFDQGG--LLTDAVIKHPHAVLLLDEIEKAHP----------------DVFNILLQVMDN----------GTLTDNNGRK 157 (315)
T ss_dssp HHHHTT--HHHHHHHHCSSEEEEEETGGGSCH----------------HHHHHHHHHHHH----------SEEEETTTEE
T ss_pred ccccCC--hhhHHHHhCccchhhhcccccccc----------------hHhhhhHHhhcc----------ceecCCCCCc
Confidence 111111 122223345569999999997654 455555555432 1112222223
Q ss_pred hhcccEEEEEecCCCC-------------------------CCChhhhcccceEEEcCCCCHHHHHHHHHHhcccccccc
Q 002337 519 ICRQQVLLVAAADSSE-------------------------GLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELT 573 (934)
Q Consensus 519 ~~~~~ViVIatTn~~~-------------------------~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~ 573 (934)
....+.++|.|+|-.. .+.|.+..|++..+.+.+++.++...|+..++.......
T Consensus 158 vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l 237 (315)
T d1r6bx3 158 ADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 237 (315)
T ss_dssp EECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Confidence 4467788999998431 267888899999999999999999988877664322110
Q ss_pred ----CCC-CchHHHHHHHhh--cCCCChHHHHHHHHHHH
Q 002337 574 ----SDT-GSEEFVKDIIGQ--TSGFMPRDLHALVADAG 605 (934)
Q Consensus 574 ----~d~-~~~~~L~~la~~--t~Gfv~~DL~~L~~~A~ 605 (934)
... -.+..++.++.. ...+-++.++..++.-.
T Consensus 238 ~~~~i~l~~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~~i 276 (315)
T d1r6bx3 238 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 276 (315)
T ss_dssp HHTTEEEEECHHHHHHHHHHHCBTTTBTTTHHHHHHHHH
T ss_pred HhcCcchhhHHHHHHHHHHhCCCCCCChhhHHHHHHHHH
Confidence 000 113445555553 23455677777765443
No 50
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.06 E-value=5.4e-10 Score=120.69 Aligned_cols=189 Identities=11% Similarity=0.163 Sum_probs=120.4
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccccc-----cchHHHH-----HHHHHHhhcCCCEEEE
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMASSE-----RKTSAAL-----AQAFNTAQSYSPTILL 461 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~~~-----g~~e~~L-----~~~f~~A~~~~P~IL~ 461 (934)
++...+||+||+|+|||.+|+.+|..+ +.+++.++++++..... |...+++ ..+.+..+.+..+|++
T Consensus 51 kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl 130 (315)
T d1qvra3 51 RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVIL 130 (315)
T ss_dssp SCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGGGC--------------CHHHHHHHCSSEEEE
T ss_pred CCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhhhhcCCCCCCcCcccCChHHHHHHhCCCcEEE
Confidence 344468899999999999999999998 67899999987654211 1111111 1122333345569999
Q ss_pred EcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCC--------
Q 002337 462 LRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSS-------- 533 (934)
Q Consensus 462 IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~-------- 533 (934)
+||||...+ .+...|.++++.- .............+.++|+|||-.
T Consensus 131 ~DEieK~~~----------------~v~~~ll~~l~~g----------~~~~~~gr~v~~~~~i~i~tsnlG~~~i~~~~ 184 (315)
T d1qvra3 131 FDEIEKAHP----------------DVFNILLQILDDG----------RLTDSHGRTVDFRNTVIILTSNLGSPLILEGL 184 (315)
T ss_dssp ESSGGGSCH----------------HHHHHHHHHHTTT----------EECCSSSCCEECTTEEEEEECCTTHHHHHHHH
T ss_pred EehHhhcCH----------------HHHHHHHHHhccC----------ceeCCCCcEecCcceEEEEecccChHHHhhhc
Confidence 999997654 5666666666531 111122223456789999999852
Q ss_pred ------------------CCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccc--cCCC---CchHHHHHHHhh--
Q 002337 534 ------------------EGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSEL--TSDT---GSEEFVKDIIGQ-- 588 (934)
Q Consensus 534 ------------------~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l--~~d~---~~~~~L~~la~~-- 588 (934)
..+.|.+..||+..+.+.+.+.++..+|+...+...... ..+. -.+..++.++.+
T Consensus 185 ~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~~~~~~~L~~~~y 264 (315)
T d1qvra3 185 QKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGY 264 (315)
T ss_dssp HTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTTCEEEECHHHHHHHHHHHC
T ss_pred ccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHhCC
Confidence 448899999999899999999999999987655332110 0011 113455666665
Q ss_pred cCCCChHHHHHHHHHHHHHHH
Q 002337 589 TSGFMPRDLHALVADAGANLI 609 (934)
Q Consensus 589 t~Gfv~~DL~~L~~~A~~~ai 609 (934)
...|-++.++..++......+
T Consensus 265 ~~~~GAR~L~r~Ie~~i~~~L 285 (315)
T d1qvra3 265 DPVFGARPLRRVIQRELETPL 285 (315)
T ss_dssp BTTTBTSTHHHHHHHHTHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHH
Confidence 234666778777766544443
No 51
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.05 E-value=8.5e-11 Score=130.13 Aligned_cols=143 Identities=29% Similarity=0.499 Sum_probs=92.2
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc----------CCcEEEecCccccc--cccchhhhhhHHHHHHHHhCC-CcEEE
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC----------SLNFLSVKGPELIN--MYIGESEKNVRDIFQKARSAR-PCVIF 748 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~----------~~~~i~v~~~~l~~--~~~Gese~~v~~lf~~A~~~~-p~vlf 748 (934)
+...+++|.||||+|||.++..+|... +..++.++...|+. +|.|+.+..+..++..+.... +.|||
T Consensus 41 ~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilf 120 (387)
T d1qvra2 41 RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILF 120 (387)
T ss_dssp SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCceEEE
Confidence 346789999999999999999988753 56799999999885 688999999999999988764 68899
Q ss_pred eccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCC----CCChhhhCCCCcceeeeecCCCCH
Q 002337 749 FDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD----LIDPALLRPGRFDKLLYVGVNSDV 824 (934)
Q Consensus 749 iDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~----~lD~allrpGRfd~~i~v~~Pp~~ 824 (934)
|||++.+.+..++.|. .. ...++...|. .+.+-+||||..-+ .=|+||.| ||. .|.|. +|+.
T Consensus 121 ide~h~l~~~g~~~g~-~d-~a~~Lkp~L~--------rg~~~~I~~tT~~ey~~~e~d~al~r--rF~-~v~v~-ep~~ 186 (387)
T d1qvra2 121 IDELHTVVGAGKAEGA-VD-AGNMLKPALA--------RGELRLIGATTLDEYREIEKDPALER--RFQ-PVYVD-EPTV 186 (387)
T ss_dssp ECCC---------------------HHHHH--------TTCCCEEEEECHHHHHHHTTCTTTCS--CCC-CEEEC-CCCH
T ss_pred eccHHHHhcCCCCCCc-cc-HHHHHHHHHh--------CCCcceeeecCHHHHHHhcccHHHHH--hcc-cccCC-CCcH
Confidence 9999999865432221 11 1234445443 24577888885321 34899999 997 56777 4889
Q ss_pred HHHHHHHHHHHhcC
Q 002337 825 SYRERVLKALTRKF 838 (934)
Q Consensus 825 ~~r~~Il~~~~~~~ 838 (934)
+.-..||+.+...+
T Consensus 187 ~~~~~il~~~~~~~ 200 (387)
T d1qvra2 187 EETISILRGLKEKY 200 (387)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998777655
No 52
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.01 E-value=6.6e-09 Score=105.22 Aligned_cols=165 Identities=16% Similarity=0.177 Sum_probs=107.5
Q ss_pred CCchHHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCC------------------------cE
Q 002337 370 PLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI------------------------HV 425 (934)
Q Consensus 370 ~~~~~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~------------------------~~ 425 (934)
|+..++.+.|...+.- .+.+.++||+||+|+||||+++.+|+.+-. .+
T Consensus 5 Pw~~~~~~~l~~~~~~--------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 76 (207)
T d1a5ta2 5 PWLRPDFEKLVASYQA--------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76 (207)
T ss_dssp GGGHHHHHHHHHHHHT--------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTE
T ss_pred cccHHHHHHHHHHHHc--------CCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhcccccc
Confidence 4555555666555431 234566999999999999999999998731 22
Q ss_pred EEEecCccccccccchHHHHHHHHHHhh----cCCCEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCcc
Q 002337 426 VEYSCHNLMASSERKTSAALAQAFNTAQ----SYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAE 501 (934)
Q Consensus 426 ~~I~~~~L~~~~~g~~e~~L~~~f~~A~----~~~P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~ 501 (934)
..+...+ ....-....++.+.+.+. .....|++|||+|.+.. +....|..+++.
T Consensus 77 ~~~~~~~---~~~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~----------------~a~n~Llk~lEe--- 134 (207)
T d1a5ta2 77 YTLAPEK---GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD----------------AAANALLKTLEE--- 134 (207)
T ss_dssp EEECCCT---TCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCH----------------HHHHHHHHHHTS---
T ss_pred chhhhhh---cccccccchhhHHhhhhhhccccCccceEEechhhhhhh----------------hhhHHHHHHHHh---
Confidence 2222111 001122344555555543 22456999999998764 233444455442
Q ss_pred ccccccCCCCchhhhhhhhcccEEEEEecCCCCCCChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCchHH
Q 002337 502 DEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581 (934)
Q Consensus 502 ~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~ 581 (934)
...++.+|.+|+++..+.+.+++|+ ..+.+++|+.++...+++... +.+ +..
T Consensus 135 ------------------p~~~~~fIl~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~~--------~~~-~~~ 186 (207)
T d1a5ta2 135 ------------------PPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREV--------TMS-QDA 186 (207)
T ss_dssp ------------------CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHC--------CCC-HHH
T ss_pred ------------------hcccceeeeeecChhhhhhhhccee-EEEecCCCCHHHHHHHHHHcC--------CCC-HHH
Confidence 1567899999999999999999998 599999999999888886432 112 344
Q ss_pred HHHHHhhcCCC
Q 002337 582 VKDIIGQTSGF 592 (934)
Q Consensus 582 L~~la~~t~Gf 592 (934)
+..+++.++|-
T Consensus 187 ~~~i~~~s~Gs 197 (207)
T d1a5ta2 187 LLAALRLSAGS 197 (207)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHcCCC
Confidence 56677666543
No 53
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.98 E-value=1.5e-12 Score=136.99 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=56.1
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccc---cchhhhhhHHHHHHHHhCCCcEEEeccccccc
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY---IGESEKNVRDIFQKARSARPCVIFFDELDSLA 756 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~---~Gese~~v~~lf~~A~~~~p~vlfiDEid~l~ 756 (934)
+...|.++|||||||||||++|+++|.+++.+|+.++++++...+ .+.........+..++...+++.+.++.+.+.
T Consensus 28 ~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (273)
T d1gvnb_ 28 AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSD 107 (273)
T ss_dssp CCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTSTTHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHHhccCcccchhhhHHHHHHHHhhccchHHHHHHHHHh
Confidence 345578999999999999999999999999999999998876543 33344445556666665555555544444443
Q ss_pred c
Q 002337 757 P 757 (934)
Q Consensus 757 ~ 757 (934)
.
T Consensus 108 ~ 108 (273)
T d1gvnb_ 108 Q 108 (273)
T ss_dssp H
T ss_pred h
Confidence 3
No 54
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.97 E-value=3.9e-09 Score=107.46 Aligned_cols=163 Identities=13% Similarity=0.240 Sum_probs=104.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccccccch-HHHHHHHHHHhhcCCCEEEEEcchhhccccccC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMASSERKT-SAALAQAFNTAQSYSPTILLLRDFDVFRNLVSN 474 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~~~g~~-e~~L~~~f~~A~~~~P~IL~IDEID~L~~~~~~ 474 (934)
+++|+||+|||||.|++++|+++ +..++.++..++........ .......++... ...+++||++|.+....
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~dll~iDDi~~i~~~~-- 113 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYK--SVDLLLLDDVQFLSGKE-- 113 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHH--TCSEEEEECGGGGTTCH--
T ss_pred cEEEECCCCCcHHHHHHHHHHHhccCccceEEechHHHHHHHHHHHHccchhhHHHHHh--hccchhhhhhhhhcCch--
Confidence 48999999999999999999987 56777777765443222111 111222222222 35799999999887521
Q ss_pred CCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCCC---CChhhhcccce--EEE
Q 002337 475 ESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEG---LPPTIRRCFSH--EIS 549 (934)
Q Consensus 475 ~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~---Ld~aLrrrF~~--eI~ 549 (934)
....++..+++.+.+ .+..+++++...|.. +.+.+++|+.. .+.
T Consensus 114 --------~~~~~lf~lin~~~~-----------------------~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~ 162 (213)
T d1l8qa2 114 --------RTQIEFFHIFNTLYL-----------------------LEKQIILASDRHPQKLDGVSDRLVSRFEGGILVE 162 (213)
T ss_dssp --------HHHHHHHHHHHHHHH-----------------------TTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEE
T ss_pred --------HHHHHHHHHHHHHhh-----------------------ccceEEEecCCcchhccccchHHHHHhhCceEEE
Confidence 223445555555432 455677777777754 45888888654 566
Q ss_pred cCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCCChHHHHHHHHH
Q 002337 550 MGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVAD 603 (934)
Q Consensus 550 i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gfv~~DL~~L~~~ 603 (934)
++ |+.+.|.++++..+..... ..+ ++.++-+++++. ..+|+..++..
T Consensus 163 i~-p~d~~~~~iL~~~a~~rgl---~l~-~~v~~yl~~~~~--~~R~L~~~l~~ 209 (213)
T d1l8qa2 163 IE-LDNKTRFKIIKEKLKEFNL---ELR-KEVIDYLLENTK--NVREIEGKIKL 209 (213)
T ss_dssp CC-CCHHHHHHHHHHHHHHTTC---CCC-HHHHHHHHHHCS--SHHHHHHHHHH
T ss_pred EC-CCcHHHHHHHHHHHHHcCC---CCC-HHHHHHHHHhcC--cHHHHHHHHHH
Confidence 76 6678899999988865432 222 455677777753 46777766654
No 55
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.91 E-value=3.2e-09 Score=115.40 Aligned_cols=73 Identities=25% Similarity=0.402 Sum_probs=55.4
Q ss_pred cEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcC----------CCCCEEEEEEcCCCC-CCChhhhCCCCcc
Q 002337 745 CVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND----------SSQDLFIIGASNRPD-LIDPALLRPGRFD 813 (934)
Q Consensus 745 ~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~----------~~~~v~vI~aTNrp~-~lD~allrpGRfd 813 (934)
.|+|+||+..+- .++++.|+.-|+.-.- ...++++|+|+|..+ .+.++++. ||+
T Consensus 129 gvl~iDEi~~~~-------------~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD--Rf~ 193 (333)
T d1g8pa_ 129 GYLYIDECNLLE-------------DHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD--RFG 193 (333)
T ss_dssp EEEEETTGGGSC-------------HHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--TCS
T ss_pred cEeecccHHHHH-------------HHHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--hhc
Confidence 599999998874 4577888887763210 023578899988765 68999999 999
Q ss_pred eeeeecCCCCHHHHHHHHH
Q 002337 814 KLLYVGVNSDVSYRERVLK 832 (934)
Q Consensus 814 ~~i~v~~Pp~~~~r~~Il~ 832 (934)
..+.++.|.+.+.+.++..
T Consensus 194 ~~i~v~~~~~~~~~~~~~~ 212 (333)
T d1g8pa_ 194 LSVEVLSPRDVETRVEVIR 212 (333)
T ss_dssp EEEECCCCCSHHHHHHHHH
T ss_pred ceeeccCcchhhHHHHHHH
Confidence 9999998778777776654
No 56
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.86 E-value=4.7e-09 Score=106.33 Aligned_cols=127 Identities=17% Similarity=0.271 Sum_probs=86.7
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCC------------------------cEEEecCccccccccchhhhhhHHHHHH
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSL------------------------NFLSVKGPELINMYIGESEKNVRDIFQK 738 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~------------------------~~i~v~~~~l~~~~~Gese~~v~~lf~~ 738 (934)
.+..+||+||||+|||++|+++|+.+.. .+..+...+- .... .-..+|++.+.
T Consensus 23 l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~i--~~~~ir~l~~~ 99 (207)
T d1a5ta2 23 GHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG-KNTL--GVDAVREVTEK 99 (207)
T ss_dssp CCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTT-CSSB--CHHHHHHHHHH
T ss_pred cCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhc-cccc--ccchhhHHhhh
Confidence 3567999999999999999999987521 1222211100 0000 11335666665
Q ss_pred HH----hCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcce
Q 002337 739 AR----SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 814 (934)
Q Consensus 739 A~----~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~ 814 (934)
+. .....|++|||+|.+. ....+.||..|+.. ..++++|.+||.++.|.|.+++ |+ .
T Consensus 100 ~~~~~~~~~~kviIide~d~l~-------------~~a~n~Llk~lEep---~~~~~fIl~t~~~~~ll~tI~S--Rc-~ 160 (207)
T d1a5ta2 100 LNEHARLGGAKVVWVTDAALLT-------------DAAANALLKTLEEP---PAETWFFLATREPERLLATLRS--RC-R 160 (207)
T ss_dssp TTSCCTTSSCEEEEESCGGGBC-------------HHHHHHHHHHHTSC---CTTEEEEEEESCGGGSCHHHHT--TS-E
T ss_pred hhhccccCccceEEechhhhhh-------------hhhhHHHHHHHHhh---cccceeeeeecChhhhhhhhcc--ee-E
Confidence 43 2345699999999995 23567777777754 4678899999999999999999 98 6
Q ss_pred eeeecCCCCHHHHHHHHH
Q 002337 815 LLYVGVNSDVSYRERVLK 832 (934)
Q Consensus 815 ~i~v~~Pp~~~~r~~Il~ 832 (934)
.+.|+. ++.++-..+++
T Consensus 161 ~i~~~~-~~~~~~~~~L~ 177 (207)
T d1a5ta2 161 LHYLAP-PPEQYAVTWLS 177 (207)
T ss_dssp EEECCC-CCHHHHHHHHH
T ss_pred EEecCC-CCHHHHHHHHH
Confidence 888884 77666655554
No 57
>d1e32a1 b.52.2.3 (A:21-106) Membrane fusion ATPase p97 N-terminal domain , P97-Nn {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.85 E-value=4.8e-09 Score=90.12 Aligned_cols=77 Identities=19% Similarity=0.241 Sum_probs=67.9
Q ss_pred CccccccccccCCCCceEEeecHhhhhhccccccceEEEeecCCCcceEEEEEEecCCCCCccccCCCCccCCCCCcccc
Q 002337 78 DKIDISDAKFASLDDSALLGLSTCVLKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPPTTRKQVCDGDVHSKHSSPTMLT 157 (934)
Q Consensus 78 ~~~~~~~~~~~~~d~~~~v~l~~~~l~~l~~~~G~~v~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (934)
+| |+|.|+++..+|.+++.++..+|++|||+.||.|.|+|.. .+.|+|++..+.
T Consensus 2 ~p-n~L~V~ea~~~D~~iarl~p~~m~~Lgl~~GD~V~I~Gkr---~t~av~~~~~~~---------------------- 55 (86)
T d1e32a1 2 RP-NRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK---RREAVCIVLSDD---------------------- 55 (86)
T ss_dssp CT-TEEEEECCSSCCTTEEEECHHHHHHTTCCTTCEEEEECST---TCEEEEEEEECT----------------------
T ss_pred CC-ceEEEeecccCCCCEEEECHHHHHHcCCCCCCEEEEEcCC---ceeEEEEEeccC----------------------
Confidence 56 8999999999999999999999999999999999999876 788888886443
Q ss_pred cCCCCCCCCccccccCceEEeCHhhHhhccCCccc
Q 002337 158 FPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISS 192 (934)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~lsp~~~~nL~~~~~~ 192 (934)
....+++.|.-.++.|+++..|+
T Consensus 56 ------------d~~~g~Irid~~~R~Nagv~iGD 78 (86)
T d1e32a1 56 ------------TCSDEKIRMNRVVRNNLRVRLGD 78 (86)
T ss_dssp ------------TSCSSEEEECHHHHHHTTCCTTC
T ss_pred ------------CCCCCEEEecHHHHhhcCcCCCC
Confidence 34568899999999999999985
No 58
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.85 E-value=1.7e-09 Score=112.65 Aligned_cols=172 Identities=17% Similarity=0.305 Sum_probs=99.9
Q ss_pred CCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCcccccc-----ccch-------hhhhhHHHHHHHHhCCCcEEE
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELINM-----YIGE-------SEKNVRDIFQKARSARPCVIF 748 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~~-----~~Ge-------se~~v~~lf~~A~~~~p~vlf 748 (934)
...|+++|++||||+++|+++.... ..+++.+++..+... .+|. .......+|++|... +||
T Consensus 23 ~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~a~gG---tL~ 99 (247)
T d1ny5a2 23 ECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGG---TLF 99 (247)
T ss_dssp CSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHHTTTS---EEE
T ss_pred CCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHHhcCcccCCcCCcccccCCHHHccCCC---EEE
Confidence 5689999999999999999998765 346888888655322 1221 111223466666544 999
Q ss_pred eccccccccCCCCCCCCchhHHHHHHhhhh-----hccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcce-------ee
Q 002337 749 FDELDSLAPARGASGDSGGVMDRVVSQMLA-----EIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK-------LL 816 (934)
Q Consensus 749 iDEid~l~~~r~~~~~~~~~~~~v~~~lL~-----~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~-------~i 816 (934)
|||||.+... ....+ -+++. .+++......++.+|++|+.+- .++...|+|+. .+
T Consensus 100 l~~i~~L~~~---------~Q~~L-~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l---~~l~~~~~f~~~L~~~l~~~ 166 (247)
T d1ny5a2 100 LDEIGELSLE---------AQAKL-LRVIESGKFYRLGGRKEIEVNVRILAATNRNI---KELVKEGKFREDLYYRLGVI 166 (247)
T ss_dssp EESGGGCCHH---------HHHHH-HHHHHHSEECCBTCCSBEECCCEEEEEESSCH---HHHHHTTSSCHHHHHHHTTE
T ss_pred EeChHhCCHH---------HHHHH-HHHHHhCCEEECCCCCceecCeEEEEecCCCH---HHHHHcCCCcHHHHhhcCee
Confidence 9999999532 11222 22222 2333333334678999998751 34445566654 23
Q ss_pred eecCCCCHHHHHHH---HHHHHhcC----CCC-cCCCHHHHHhhCCCCCCH--HHHHHHHHHHHH
Q 002337 817 YVGVNSDVSYRERV---LKALTRKF----KLL-EDVSLYSIAKKCPPNFTG--ADMYALCADAWF 871 (934)
Q Consensus 817 ~v~~Pp~~~~r~~I---l~~~~~~~----~~~-~~~~l~~la~~~t~g~sg--aDl~~l~~~A~~ 871 (934)
.+.+||-.+++++| ++.+++++ ... ..++-..+.......|.| .+|++++++|..
T Consensus 167 ~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~~a~~ 231 (247)
T d1ny5a2 167 EIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVL 231 (247)
T ss_dssp EEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHH
T ss_pred eecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 45666766666554 34554432 211 112323222222357887 688888887654
No 59
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.82 E-value=2.8e-08 Score=111.63 Aligned_cols=45 Identities=29% Similarity=0.640 Sum_probs=38.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccccc-ccchh
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM-YIGES 728 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~-~~Ges 728 (934)
+++|||.||||||||+||+.+|+.++.||+.++++.+... |+|+.
T Consensus 49 ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~D 94 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (443)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCC
T ss_pred cccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceeecc
Confidence 6799999999999999999999999999999999887653 66644
No 60
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=98.72 E-value=2.6e-08 Score=109.15 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=92.6
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccc-cccc-hHHHHHHHHHHhh----cCCCEEEEEcchhhc
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS-SERK-TSAALAQAFNTAQ----SYSPTILLLRDFDVF 468 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~-~~g~-~e~~L~~~f~~A~----~~~P~IL~IDEID~L 468 (934)
.++.++|+.||+|||||.+||++|..++.+++.++++.++.. |.|. ....+......+. ....+|+++||+|..
T Consensus 66 ~p~~niLfiGPTGvGKTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~ 145 (364)
T d1um8a_ 66 LSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKI 145 (364)
T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC
T ss_pred CCCcceeeeCCCCccHHHHHHHHHhhcccceeehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhh
Confidence 466789999999999999999999999999999999987763 2222 2345555554432 235689999999998
Q ss_pred cccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCC----------------
Q 002337 469 RNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADS---------------- 532 (934)
Q Consensus 469 ~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~---------------- 532 (934)
.+......... ......+...|.++++..... ............+.+++.|+|-
T Consensus 146 ~~~s~~~~~~~--d~a~~~V~~~lLqild~~~~~--------~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~ 215 (364)
T d1um8a_ 146 SRLSENRSITR--DVSGEGVQQALLKIVEGSLVN--------IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIK 215 (364)
T ss_dssp ----------------CHHHHHHHHHHHHCCEEC-----------------------CEECTTCEEEEEECCTTHHHHTT
T ss_pred ccccccccccc--cccchHHHHhhhhhhcCceec--------cCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhh
Confidence 76322111111 112344666665555421000 0000001111223333333332
Q ss_pred ---------------------------------CCCCChhhhcccceEEEcCCCCHHHHHHHHHH
Q 002337 533 ---------------------------------SEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQ 564 (934)
Q Consensus 533 ---------------------------------~~~Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ 564 (934)
...+.|.+..|++..+.+.+.++++..+|+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~ 280 (364)
T d1um8a_ 216 KRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQK 280 (364)
T ss_dssp TSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHS
T ss_pred hhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHHHHhcchhhHhhhhHHHHHHHHHH
Confidence 12367889999999999999999999999864
No 61
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.60 E-value=2.7e-07 Score=99.77 Aligned_cols=84 Identities=14% Similarity=0.308 Sum_probs=52.9
Q ss_pred CEEEEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCC-C
Q 002337 457 PTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSE-G 535 (934)
Q Consensus 457 P~IL~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~-~ 535 (934)
..|+||||++.+.+ ++.+.|.+.+++..- . -...|. ......++++++|+|..+ .
T Consensus 128 ~gvl~iDEi~~~~~----------------~~~~aLl~~me~~~v-~-i~r~g~------~~~~p~~f~liaa~Np~~~~ 183 (333)
T d1g8pa_ 128 RGYLYIDECNLLED----------------HIVDLLLDVAQSGEN-V-VERDGL------SIRHPARFVLVGSGNPEEGD 183 (333)
T ss_dssp TEEEEETTGGGSCH----------------HHHHHHHHHHHHSEE-E-ECCTTC------CEEEECCEEEEEEECSCSCC
T ss_pred ccEeecccHHHHHH----------------HHHHHHhhhhcCCeE-E-ecccCc------eecCCCCEEEEEecCccccc
Confidence 48999999997654 344445454432100 0 000111 111245688999998764 4
Q ss_pred CChhhhcccceEEEcCCC-CHHHHHHHHHH
Q 002337 536 LPPTIRRCFSHEISMGPL-TEQQRVEMLSQ 564 (934)
Q Consensus 536 Ld~aLrrrF~~eI~i~~P-de~~R~~IL~~ 564 (934)
++++++.||+..+.++.| +...|.++...
T Consensus 184 l~~~llDRf~~~i~v~~~~~~~~~~~~~~~ 213 (333)
T d1g8pa_ 184 LRPQLLDRFGLSVEVLSPRDVETRVEVIRR 213 (333)
T ss_dssp CCHHHHTTCSEEEECCCCCSHHHHHHHHHH
T ss_pred cccchhhhhcceeeccCcchhhHHHHHHHh
Confidence 999999999998998876 55677666654
No 62
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.56 E-value=2.8e-07 Score=92.23 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=84.1
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhC------CcEEEEecCccccccccchHHHHHHHHHHhhcC----CCEEEEEcch
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLG------IHVVEYSCHNLMASSERKTSAALAQAFNTAQSY----SPTILLLRDF 465 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg------~~~~~I~~~~L~~~~~g~~e~~L~~~f~~A~~~----~P~IL~IDEI 465 (934)
.+.++||+||||+|||++|+.+++.+. .+++.+.... ..-....+|.+...+... ..-|++|||+
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~-----~~I~Id~IR~i~~~~~~~~~~~~~KviIId~a 88 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG-----ENIGIDDIRTIKDFLNYSPELYTRKYVIVHDC 88 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS-----SCBCHHHHHHHHHHHTSCCSSSSSEEEEETTG
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc-----CCCCHHHHHHHHHHHhhCcccCCCEEEEEeCc
Confidence 345799999999999999999999873 3577776531 112455667776665532 2359999999
Q ss_pred hhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCCCCChhhhcccc
Q 002337 466 DVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFS 545 (934)
Q Consensus 466 D~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~~Ld~aLrrrF~ 545 (934)
|.+.. +-...|...++. ....+++|.+|+.++.|.|.+++|+.
T Consensus 89 d~l~~----------------~aqNaLLK~LEE---------------------Pp~~t~fiLit~~~~~ll~TI~SRC~ 131 (198)
T d2gnoa2 89 ERMTQ----------------QAANAFLKALEE---------------------PPEYAVIVLNTRRWHYLLPTIKSRVF 131 (198)
T ss_dssp GGBCH----------------HHHHHTHHHHHS---------------------CCTTEEEEEEESCGGGSCHHHHTTSE
T ss_pred cccch----------------hhhhHHHHHHhC---------------------CCCCceeeeccCChhhCHHHHhcceE
Confidence 98864 223333333321 15678888999999999999999984
Q ss_pred eEEEcCCCCHH
Q 002337 546 HEISMGPLTEQ 556 (934)
Q Consensus 546 ~eI~i~~Pde~ 556 (934)
.+.++.|.+.
T Consensus 132 -~i~~~~p~~~ 141 (198)
T d2gnoa2 132 -RVVVNVPKEF 141 (198)
T ss_dssp -EEECCCCHHH
T ss_pred -EEeCCCchHH
Confidence 8889887653
No 63
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.51 E-value=1e-07 Score=106.93 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=36.6
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcccc
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMA 435 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~ 435 (934)
.+.||||+||+|||||.|||.+|+.++++|+.++|..+..
T Consensus 48 ~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTe 87 (443)
T d1g41a_ 48 TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTE 87 (443)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC-
T ss_pred ccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeee
Confidence 4569999999999999999999999999999999998765
No 64
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.39 E-value=1.7e-07 Score=93.90 Aligned_cols=114 Identities=12% Similarity=0.160 Sum_probs=84.0
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcC------CcEEEecCccccccccchhhhhhHHHHHHHHhC----CCcEEEeccc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECS------LNFLSVKGPELINMYIGESEKNVRDIFQKARSA----RPCVIFFDEL 752 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~------~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~----~p~vlfiDEi 752 (934)
.+..++|+||||+|||++|+.+++... ..|+.+++.. .-+| -..+|++.+.+... ...|++|||+
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I~--Id~IR~i~~~~~~~~~~~~~KviIId~a 88 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENIG--IDDIRTIKDFLNYSPELYTRKYVIVHDC 88 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCBC--HHHHHHHHHHHTSCCSSSSSEEEEETTG
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc---CCCC--HHHHHHHHHHHhhCcccCCCEEEEEeCc
Confidence 367999999999999999999998662 2477776421 1111 24577777776532 3359999999
Q ss_pred cccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCChhhhCCCCcceeeeecC
Q 002337 753 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 820 (934)
Q Consensus 753 d~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD~allrpGRfd~~i~v~~ 820 (934)
|.+. ....+.||..|+.. ..++++|.+||.++.|.|.+++ |+ ..++++.
T Consensus 89 d~l~-------------~~aqNaLLK~LEEP---p~~t~fiLit~~~~~ll~TI~S--RC-~~i~~~~ 137 (198)
T d2gnoa2 89 ERMT-------------QQAANAFLKALEEP---PEYAVIVLNTRRWHYLLPTIKS--RV-FRVVVNV 137 (198)
T ss_dssp GGBC-------------HHHHHHTHHHHHSC---CTTEEEEEEESCGGGSCHHHHT--TS-EEEECCC
T ss_pred cccc-------------hhhhhHHHHHHhCC---CCCceeeeccCChhhCHHHHhc--ce-EEEeCCC
Confidence 9995 34567788887754 3567777889999999999999 97 5777774
No 65
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.24 E-value=3e-07 Score=95.47 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=38.5
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcccc
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMA 435 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~ 435 (934)
....|.+|||+||||||||++|+++|++++.+++.+++.++..
T Consensus 28 ~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 28 AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQ 70 (273)
T ss_dssp CCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHT
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHH
Confidence 3567889999999999999999999999999999999876654
No 66
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.17 E-value=1.7e-05 Score=81.58 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=31.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCcc
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL 433 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L 433 (934)
..++|+||+|+|||+|++.++.+++..+..+++...
T Consensus 30 ~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~ 65 (283)
T d2fnaa2 30 PITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKF 65 (283)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred CEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccc
Confidence 469999999999999999999999998888887643
No 67
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.16 E-value=3.5e-06 Score=81.48 Aligned_cols=30 Identities=33% Similarity=0.764 Sum_probs=25.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
.|+|.||||||||||++.+++.++.+...+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~ 31 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGF 31 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEE
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceE
Confidence 389999999999999999999997654433
No 68
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.03 E-value=1.5e-05 Score=81.93 Aligned_cols=168 Identities=13% Similarity=0.060 Sum_probs=96.0
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccc---------------------------------------
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY--------------------------------------- 724 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~--------------------------------------- 724 (934)
+..++++||+|+|||++++.++...+..+..+++.......
T Consensus 29 ~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMG 108 (283)
T ss_dssp SSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECS
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccccccccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccc
Confidence 35789999999999999999999998888777653321110
Q ss_pred -------cchhhhhhHHHHHHHH--hCCCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEE
Q 002337 725 -------IGESEKNVRDIFQKAR--SARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 795 (934)
Q Consensus 725 -------~Gese~~v~~lf~~A~--~~~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~a 795 (934)
.......+.++++... ...+.++++||++.+..... ... ...+..+... ...+..+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~-----~~~-~~~l~~~~~~-------~~~~~~i~~ 175 (283)
T d2fnaa2 109 NEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRG-----VNL-LPALAYAYDN-------LKRIKFIMS 175 (283)
T ss_dssp SSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTT-----CCC-HHHHHHHHHH-------CTTEEEEEE
T ss_pred cccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccch-----HHH-HHHHHHHHHh-------hhhhhhhhc
Confidence 0011122344444432 35678999999999864321 111 1222222221 123333333
Q ss_pred cCCCC-------CCChhhhCCCCcceeeeecCCCCHHHHHHHHHHHHhcCCCCcCCCHHHHHhhCCCCCCHHHHHHHHHH
Q 002337 796 SNRPD-------LIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCAD 868 (934)
Q Consensus 796 TNrp~-------~lD~allrpGRfd~~i~v~~Pp~~~~r~~Il~~~~~~~~~~~~~~l~~la~~~t~g~sgaDl~~l~~~ 868 (934)
..... ..+..---.||+...++++ |-+.++..++++.......+..+ ++..+.+. +.|. ..-|..++..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~-~l~~~e~~~~l~~~~~~~~~~~~-~~~~i~~~-~~G~-P~~L~~~~~~ 251 (283)
T d2fnaa2 176 GSEMGLLYDYLRVEDPESPLFGRAFSTVELK-PFSREEAIEFLRRGFQEADIDFK-DYEVVYEK-IGGI-PGWLTYFGFI 251 (283)
T ss_dssp ESSHHHHHHHTTTTCTTSTTTTCCCEEEEEC-CCCHHHHHHHHHHHHHHHTCCCC-CHHHHHHH-HCSC-HHHHHHHHHH
T ss_pred cccchHHHHHHHhhhhcchhcccceeEEeeC-CCCHHHHHHHHHhhhhhcCCCHH-HHHHHHHH-hCCC-HHHHHHHHHH
Confidence 32211 1111111125667788888 57888888888877776555433 46778877 4666 4456666543
No 69
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=97.96 E-value=1e-05 Score=83.45 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=77.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccccccchHHHH---------------HHHHHHhhcCCCEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMASSERKTSAAL---------------AQAFNTAQSYSPTI 459 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~~~g~~e~~L---------------~~~f~~A~~~~P~I 459 (934)
.+|+|+|++|||||++|+++.... ...++.++|..+.... .+..+ ...|+.| ..+.
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~---~~~~lfg~~~~~~~~~~~~~~g~l~~a---~gGt 97 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDI---FEAELFGYEKGAFTGAVSSKEGFFELA---DGGT 97 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHH---HHHHHHCBCTTSSTTCCSCBCCHHHHT---TTSE
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcc---cHHHhcCcccCCcCCcccccCCHHHcc---CCCE
Confidence 459999999999999999998765 3578899997543221 01100 1234443 3578
Q ss_pred EEEcchhhccccccCCCCCCccccchHHHHHHHHHhcCCCccccccccCCCCchhhhhhhhcccEEEEEecCCCC-----
Q 002337 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSE----- 534 (934)
Q Consensus 460 L~IDEID~L~~~~~~~~~~~d~~~~~~ev~~~L~~ll~~~~~~~~~~~~g~~~~~~~~~~~~~~ViVIatTn~~~----- 534 (934)
|||||||.+... ....+...|..-.- ...++ ......++.+|++|+.+.
T Consensus 98 L~l~~i~~L~~~------------~Q~~L~~~l~~~~~-------~~~~~-------~~~~~~~~RlI~~s~~~l~~l~~ 151 (247)
T d1ny5a2 98 LFLDEIGELSLE------------AQAKLLRVIESGKF-------YRLGG-------RKEIEVNVRILAATNRNIKELVK 151 (247)
T ss_dssp EEEESGGGCCHH------------HHHHHHHHHHHSEE-------CCBTC-------CSBEECCCEEEEEESSCHHHHHH
T ss_pred EEEeChHhCCHH------------HHHHHHHHHHhCCE-------EECCC-------CCceecCeEEEEecCCCHHHHHH
Confidence 999999988651 12233433332100 00000 011133567888887642
Q ss_pred --CCChhhhcccc-eEEEcCCCCH--HHHHHHHHHhcc
Q 002337 535 --GLPPTIRRCFS-HEISMGPLTE--QQRVEMLSQLLQ 567 (934)
Q Consensus 535 --~Ld~aLrrrF~-~eI~i~~Pde--~~R~~IL~~ll~ 567 (934)
.+.+.+..++. ..|.+|+..+ ++...|++.+++
T Consensus 152 ~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~ 189 (247)
T d1ny5a2 152 EGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLK 189 (247)
T ss_dssp TTSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHH
T ss_pred cCCCcHHHHhhcCeeeecCCChhhchhhHhhhhhhhhh
Confidence 35566655543 3577776643 344555566554
No 70
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.89 E-value=2.1e-05 Score=75.76 Aligned_cols=26 Identities=31% Similarity=0.571 Sum_probs=23.1
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLN 711 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~ 711 (934)
+|++.||||+|||||++++++.+...
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~ 27 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKR 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCC
Confidence 58999999999999999999987543
No 71
>d1cz5a1 b.52.2.3 (A:1-91) N-terminal domain of VAT-N, VAT-Nn {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.81 E-value=2.9e-05 Score=66.56 Aligned_cols=74 Identities=15% Similarity=0.196 Sum_probs=60.6
Q ss_pred cccccccCCCC--ceEEeecHhhhhhccccccceEEEeecCCCcceEEEEEEecCCCCCccccCCCCccCCCCCcccccC
Q 002337 82 ISDAKFASLDD--SALLGLSTCVLKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPPTTRKQVCDGDVHSKHSSPTMLTFP 159 (934)
Q Consensus 82 ~~~~~~~~~d~--~~~v~l~~~~l~~l~~~~G~~v~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (934)
.|.|.+|..+| .+++-++++.|++||++.||.|.|+|.. ...|+|....|+
T Consensus 8 ~L~V~ea~~~D~grgiari~~~~m~~Lgl~~GD~V~I~Gkr---~t~a~v~~~~~~------------------------ 60 (91)
T d1cz5a1 8 ILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIEKVR---KTVGRVYRARPE------------------------ 60 (91)
T ss_dssp EEEEECCSCCSCCSSEEEECHHHHHTTSCCTTCEEEEESSS---EEEEEEEECSST------------------------
T ss_pred EEEEeeecccccCCcEEEECHHHHHHcCCCCCCEEEEEcCc---eEEEEEEecCcc------------------------
Confidence 46788888899 7999999999999999999999999754 455555543332
Q ss_pred CCCCCCCccccccCceEEeCHhhHhhccCCccc
Q 002337 160 SIHLPQDDMELLDRQVAYLSPLLAFNLDLHISS 192 (934)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~lsp~~~~nL~~~~~~ 192 (934)
....+++.|.-.++.|++...|+
T Consensus 61 ----------d~~~g~IriDg~~R~Nagv~iGD 83 (91)
T d1cz5a1 61 ----------DENKGIVRIDSVMRNNCGASIGD 83 (91)
T ss_dssp ----------TTTTSEEECCHHHHHHHTCCTTC
T ss_pred ----------cCCCCEEEEcHHHHHhCCCCCCC
Confidence 34568999999999999999985
No 72
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.74 E-value=2.1e-06 Score=87.75 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=30.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+.-+.|.||+|||||||++.+++.+.+.-+.|-.
T Consensus 29 v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i 65 (239)
T d1v43a3 29 IKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYF 65 (239)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEE
T ss_pred ECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEE
Confidence 3444459999999999999999999999887766543
No 73
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.67 E-value=3.5e-06 Score=85.72 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=30.3
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEe
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~ 429 (934)
.+..+.-+.|.||+|||||||++.+++.+.+.-+.|-
T Consensus 22 ~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~ 58 (232)
T d2awna2 22 DIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF 58 (232)
T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEE
T ss_pred EEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEE
Confidence 3444555999999999999999999999888776653
No 74
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.67 E-value=3.6e-06 Score=85.59 Aligned_cols=38 Identities=21% Similarity=0.113 Sum_probs=30.9
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
.+..+.-+.|.||+|||||||++++++...+.-++|-.
T Consensus 27 ~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~ 64 (230)
T d1l2ta_ 27 NIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYI 64 (230)
T ss_dssp EECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred EEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEE
Confidence 34445559999999999999999999998887766544
No 75
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.63 E-value=1.5e-05 Score=74.88 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=28.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
++|.|.|||||||||+++.+|.++|.+++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~ 33 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS 33 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 4699999999999999999999999988643
No 76
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.51 E-value=2.6e-05 Score=74.97 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=29.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
.+.|++.|||||||||||++||..+|.+++....
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~ 40 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYG 40 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeeh
Confidence 4679999999999999999999999988775543
No 77
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=97.45 E-value=9.2e-06 Score=83.00 Aligned_cols=37 Identities=19% Similarity=0.071 Sum_probs=30.3
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+.-+.|.||+|||||||++.+++...+.-++|..
T Consensus 28 i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~ 64 (240)
T d3dhwc1 28 VPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLV 64 (240)
T ss_dssp ECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEE
Confidence 3444459999999999999999999998887776543
No 78
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=97.43 E-value=7.5e-06 Score=83.01 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=30.1
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+.-+.|.||+||||||+++++++.+.+.-+.|..
T Consensus 23 i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~ 59 (229)
T d3d31a2 23 VESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILL 59 (229)
T ss_dssp ECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEE
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEE
Confidence 3444449999999999999999999998887666543
No 79
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.41 E-value=3.3e-05 Score=73.59 Aligned_cols=29 Identities=34% Similarity=0.668 Sum_probs=26.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.|||||||||+++.+|.++|.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 48999999999999999999999988764
No 80
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.39 E-value=3.8e-05 Score=73.42 Aligned_cols=31 Identities=26% Similarity=0.499 Sum_probs=28.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
++|+|+|+||+||||+++.+|+.+|.+++..
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 3689999999999999999999999998864
No 81
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=97.37 E-value=6.4e-06 Score=84.20 Aligned_cols=36 Identities=28% Similarity=0.304 Sum_probs=29.7
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEe
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~ 429 (934)
+..+.-+.|.||+||||||++|++++.+.+.-+.|-
T Consensus 26 i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~ 61 (240)
T d1g2912 26 VKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIY 61 (240)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEE
T ss_pred EcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEE
Confidence 344555999999999999999999999887766653
No 82
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.36 E-value=3.4e-05 Score=73.79 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=31.1
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~ 431 (934)
++-|+|.|||||||||+++++++++|.+++.++..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d 38 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSD 38 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHH
Confidence 34589999999999999999999999999988764
No 83
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.36 E-value=3.9e-05 Score=71.93 Aligned_cols=32 Identities=25% Similarity=0.615 Sum_probs=28.9
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
+.|+|.||||+||||+|+++|..++.+|+...
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 57999999999999999999999999987544
No 84
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.36 E-value=8.8e-06 Score=82.95 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=26.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEEEe
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~I~ 429 (934)
+.|.||+|||||||++.+++.+.+.-+.|.
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~~p~~G~I~ 56 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIVKPDRGEVR 56 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSCCSEEEEE
T ss_pred EEEECCCCChHHHHHHHHHcCCCCCceEEE
Confidence 678999999999999999999988766654
No 85
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.36 E-value=2.3e-05 Score=75.31 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=34.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccccc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~ 723 (934)
.+.|+|.|||||||||+|+++|..++.+++......+...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~~ 46 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFE 46 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhhh
Confidence 4689999999999999999999999999988776554443
No 86
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.32 E-value=5.4e-05 Score=72.81 Aligned_cols=31 Identities=39% Similarity=0.639 Sum_probs=28.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
.+|+|.|+|||||||+++.+|..+|.+++..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4689999999999999999999999998754
No 87
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=97.23 E-value=1.7e-05 Score=82.12 Aligned_cols=64 Identities=14% Similarity=0.172 Sum_probs=42.1
Q ss_pred CChhhhcccceEEEcCCCCHHHHHHHHHHhccccccccCCCCc-----------hHHHHHHHhhcCC--CChHHHHHHHH
Q 002337 536 LPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS-----------EEFVKDIIGQTSG--FMPRDLHALVA 602 (934)
Q Consensus 536 Ld~aLrrrF~~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~-----------~~~L~~la~~t~G--fv~~DL~~L~~ 602 (934)
+.+....++.++++.| +.||..|.+++..++..+..|... ...+.++.++.-. ++.||+..+..
T Consensus 138 l~~~~~~~~p~~LSGG---~~QRv~iAraL~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~~~~ 214 (258)
T d1b0ua_ 138 IDERAQGKYPVHLSGG---QQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARH 214 (258)
T ss_dssp CCHHHHTSCGGGSCHH---HHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHHHHH
T ss_pred CchhhhccCcccccHH---HHHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHHHHH
Confidence 4555666777899999 999999999999888777545432 1233444432111 56677766544
No 88
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.20 E-value=0.00013 Score=69.46 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=29.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+-|+|.|+||+||||+++++|++++..++.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEeec
Confidence 358999999999999999999999988877654
No 89
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.20 E-value=8.2e-05 Score=71.13 Aligned_cols=29 Identities=41% Similarity=0.765 Sum_probs=26.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
|+|.|+|||||||+++.+|..+|.+|+..
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 78889999999999999999999998854
No 90
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.15 E-value=8.4e-05 Score=70.60 Aligned_cols=32 Identities=41% Similarity=0.759 Sum_probs=28.7
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
..|+|.||||+||||+|+++|..++.+++.++
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEech
Confidence 46889999999999999999999999988643
No 91
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.12 E-value=0.00015 Score=69.27 Aligned_cols=24 Identities=38% Similarity=0.610 Sum_probs=22.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el 421 (934)
++|+|+||||||||||++.+++.+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 569999999999999999999988
No 92
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.11 E-value=0.0026 Score=65.78 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=28.8
Q ss_pred eEEEcCCCCHHHHHHHHHHhccccccccCCCCchHHHHHHHhhcCCC
Q 002337 546 HEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGF 592 (934)
Q Consensus 546 ~eI~i~~Pde~~R~~IL~~ll~~~~~l~~d~~~~~~L~~la~~t~Gf 592 (934)
+.+.+..++.++-.++|..+....+. ....+...+++++.+.|.
T Consensus 178 ~~~~l~~L~~~ea~~Lf~~~~~~~~~---~~~~~~~~~~iv~~c~Gl 221 (277)
T d2a5yb3 178 EFIEVTSLEIDECYDFLEAYGMPMPV---GEKEEDVLNKTIELSSGN 221 (277)
T ss_dssp EEEECCCCCHHHHHHHHHHTSCCCC-----CHHHHHHHHHHHHHTTC
T ss_pred ceEECCCCCHHHHHHHHHHHhCCccC---chhhHHHHHHHHHHhCCC
Confidence 46789999999999999876533221 111233446778888776
No 93
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.10 E-value=0.00016 Score=68.73 Aligned_cols=28 Identities=29% Similarity=0.536 Sum_probs=25.0
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg~ 423 (934)
.+..|+|.||||+||||+++.+|.+++.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 3457999999999999999999999864
No 94
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.09 E-value=2.1e-05 Score=80.26 Aligned_cols=37 Identities=22% Similarity=0.123 Sum_probs=30.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+.-+.|.||+||||||+++++++...+.-+.|..
T Consensus 28 i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~ 64 (242)
T d1oxxk2 28 IENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYF 64 (242)
T ss_dssp ECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEE
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEE
Confidence 3445559999999999999999999998777766544
No 95
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.09 E-value=0.00013 Score=69.38 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=26.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
.=++|.|||||||||+++.+|+.++..++..
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~~ 37 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDG 37 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEG
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeech
Confidence 3478899999999999999999998866543
No 96
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.08 E-value=0.00011 Score=70.13 Aligned_cols=32 Identities=34% Similarity=0.579 Sum_probs=29.2
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
++|+|.|+||+|||++++++|+.++.+|+..+
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 36899999999999999999999999999764
No 97
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.06 E-value=0.00014 Score=68.70 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=24.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
-|+|.|||||||||+++.+|++++..++
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 4899999999999999999999976543
No 98
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.04 E-value=8.6e-05 Score=70.82 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=32.2
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l 720 (934)
++-|+|.|||||||||+|+++++.++.+++.+++.++
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 3457899999999999999999999999999886443
No 99
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.01 E-value=0.00025 Score=69.15 Aligned_cols=31 Identities=29% Similarity=0.437 Sum_probs=26.7
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
+..|+|.|||||||||+++.||.++|...+.
T Consensus 3 ~~riil~G~pGSGKsT~a~~La~~~g~~~i~ 33 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPKLAKNFCVCHLA 33 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence 4458899999999999999999999876544
No 100
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.99 E-value=0.00015 Score=69.54 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=29.1
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
..|+|.|+||+||||+++.+|..+|++|+..+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEehh
Confidence 56889999999999999999999999998653
No 101
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.99 E-value=0.00019 Score=68.34 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=24.7
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg~ 423 (934)
.|..|+|+|+||+||||+++++|..|+.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 4556999999999999999999999853
No 102
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.95 E-value=0.00026 Score=68.08 Aligned_cols=29 Identities=34% Similarity=0.602 Sum_probs=26.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.|||||||||+++.||.++|..++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceec
Confidence 38999999999999999999999887654
No 103
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.89 E-value=0.0002 Score=68.24 Aligned_cols=31 Identities=26% Similarity=0.554 Sum_probs=28.0
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
.|+|.|+||+||||+++.+|..++++|+..+
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 4778899999999999999999999998654
No 104
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.87 E-value=0.00033 Score=68.37 Aligned_cols=30 Identities=30% Similarity=0.432 Sum_probs=26.2
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
|.-|+|.||||+||||+++.||..+|...+
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~~i 35 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHL 35 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCceE
Confidence 346899999999999999999999987544
No 105
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.85 E-value=0.00024 Score=69.17 Aligned_cols=29 Identities=21% Similarity=0.476 Sum_probs=25.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
..|+|.|||||||||+++.+|..+|...+
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 35999999999999999999999987654
No 106
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.82 E-value=0.00041 Score=67.83 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=26.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.-|+|.||||+||||+|+.||+.+|...+.
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is 38 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLS 38 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence 358999999999999999999999875543
No 107
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.80 E-value=0.00031 Score=67.79 Aligned_cols=29 Identities=45% Similarity=0.648 Sum_probs=26.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.|||||||||+++.||..+|...+.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~ 30 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIS 30 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 48999999999999999999999876554
No 108
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.75 E-value=0.00036 Score=66.10 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=30.0
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~ 717 (934)
.+-|+|.||||+||||+|+++++.++..++.++.
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeec
Confidence 3567889999999999999999999998887764
No 109
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.73 E-value=0.00047 Score=66.58 Aligned_cols=29 Identities=31% Similarity=0.608 Sum_probs=25.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.|||||||||+++.||.++|...+.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceee
Confidence 38999999999999999999999886554
No 110
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.72 E-value=0.00021 Score=69.71 Aligned_cols=38 Identities=21% Similarity=0.408 Sum_probs=30.9
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccccc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~ 723 (934)
|..|+|.||||+||||+|+.+|..+++.++ +..+++..
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i--s~~~~~~~ 40 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI--SAGDLLRA 40 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC--CHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE--ehhHHHHH
Confidence 668999999999999999999999987765 44455443
No 111
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.70 E-value=0.00035 Score=67.99 Aligned_cols=37 Identities=30% Similarity=0.528 Sum_probs=30.0
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
++..|+|.||||+||||+|+.+|..++..++++ .+++
T Consensus 2 ~~~riil~G~pGSGKsT~a~~La~~~g~~~i~~--gdll 38 (190)
T d1ak2a1 2 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT--GDML 38 (190)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHTCEEEEH--HHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHHHHhCCeEEeH--HHHH
Confidence 356788999999999999999999998776554 3554
No 112
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.69 E-value=0.00036 Score=66.14 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=28.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
+.-++|.|||||||||+|+++|+.++..++..+
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 445778999999999999999999998887654
No 113
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.67 E-value=0.00043 Score=65.63 Aligned_cols=28 Identities=43% Similarity=0.624 Sum_probs=24.9
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCC
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
++.+|+|.||||+||||+++.+|..++.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 3566999999999999999999999864
No 114
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.66 E-value=0.00055 Score=66.07 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=25.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.||||+||||+++.||.++|...+.
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~~i~ 32 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLA 32 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceEe
Confidence 38899999999999999999999875443
No 115
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.65 E-value=0.00023 Score=68.99 Aligned_cols=27 Identities=37% Similarity=0.430 Sum_probs=24.1
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~ 423 (934)
+.-|+|+|+||+||||+++.||.+++.
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~ 45 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVC 45 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 456889999999999999999999854
No 116
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.64 E-value=0.00055 Score=66.90 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=27.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccc
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLM 434 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~ 434 (934)
.|+|.||||+||||+++.||.++|... ++..+++
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g~~~--is~gdll 41 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFELKH--LSSGDLL 41 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBCCEE--EEHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCCeE--EcHHHHH
Confidence 589999999999999999999998654 4444433
No 117
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.63 E-value=0.00042 Score=65.33 Aligned_cols=28 Identities=25% Similarity=0.384 Sum_probs=24.8
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEE
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFL 713 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i 713 (934)
-|+|.||||+||||+|+.+|..++..++
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 4789999999999999999999877654
No 118
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.61 E-value=0.00067 Score=66.00 Aligned_cols=28 Identities=29% Similarity=0.494 Sum_probs=25.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
-|+|.||||+||||+|+.||+.+|...+
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~g~~~i 30 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKYGYTHL 30 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceE
Confidence 4899999999999999999999987544
No 119
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.61 E-value=0.00039 Score=66.82 Aligned_cols=35 Identities=23% Similarity=0.492 Sum_probs=29.2
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEecCccccc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 722 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~ 722 (934)
+|+|.||||+||||+|+.+|..++..+++. .+++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~--~~ll~ 36 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIST--GDMFR 36 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH--HHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceech--hHHHH
Confidence 488999999999999999999998877764 34544
No 120
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.61 E-value=0.0024 Score=64.00 Aligned_cols=81 Identities=27% Similarity=0.299 Sum_probs=53.5
Q ss_pred hhcCCCCCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCcccccc--------------------------c--c
Q 002337 677 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELINM--------------------------Y--I 725 (934)
Q Consensus 677 ~~~~~~~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~~--------------------------~--~ 725 (934)
+..|+.++.-++++||||+|||+++..+|... +.+++++...+-... + .
T Consensus 19 l~GGi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (242)
T d1tf7a2 19 CGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPES 98 (242)
T ss_dssp TTSSEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGG
T ss_pred hcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecch
Confidence 34578889999999999999999999998765 444555543210000 0 0
Q ss_pred chhhhhhHHHHHHHHhCCCcEEEecccccccc
Q 002337 726 GESEKNVRDIFQKARSARPCVIFFDELDSLAP 757 (934)
Q Consensus 726 Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~ 757 (934)
......+..+........|.++++|-++.+..
T Consensus 99 ~~~~~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 99 AGLEDHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp SCHHHHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred hhHHHHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 01112234455555678899999999998874
No 121
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.60 E-value=0.00064 Score=66.41 Aligned_cols=36 Identities=25% Similarity=0.437 Sum_probs=28.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccc
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLM 434 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~ 434 (934)
+.-|+|.|||||||||+++.||.++|... ++..+++
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~~~--is~g~ll 43 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTH--LSTGDLL 43 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCCEE--EEHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCee--EeccHHH
Confidence 34589999999999999999999998754 4554444
No 122
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=96.57 E-value=0.0026 Score=64.44 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.4
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcC
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
+.+.++..+.+.||+|+||||++++++....
T Consensus 24 l~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 24 LSIKQGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 4677889999999999999999999988663
No 123
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.57 E-value=0.00068 Score=65.15 Aligned_cols=29 Identities=28% Similarity=0.586 Sum_probs=25.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|+|.||||+||||+++.+|..+|...+.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 38899999999999999999999876554
No 124
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.52 E-value=0.00049 Score=66.36 Aligned_cols=30 Identities=40% Similarity=0.601 Sum_probs=27.0
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
+|+|.||||+||||+|+.+|+.++...+++
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEch
Confidence 588999999999999999999998877755
No 125
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.51 E-value=0.00077 Score=66.65 Aligned_cols=28 Identities=29% Similarity=0.538 Sum_probs=24.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
-|.+.|||||||+|+++.||+++|.+++
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~i 32 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLL 32 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 3778899999999999999999987654
No 126
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.48 E-value=0.00052 Score=66.92 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=27.5
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEEE
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLS 714 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i~ 714 (934)
+|.-|++.||||+||||+|+.+|..++...++
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 45678999999999999999999999876554
No 127
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.48 E-value=0.0065 Score=60.65 Aligned_cols=77 Identities=12% Similarity=0.176 Sum_probs=51.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccc----------------------------cccchH
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMAS----------------------------SERKTS 442 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~----------------------------~~g~~e 442 (934)
+..+.-++++|+||+|||+++..+|... +.....++..+-... ......
T Consensus 23 i~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (242)
T d1tf7a2 23 FFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLE 102 (242)
T ss_dssp EESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHH
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhHH
Confidence 4566679999999999999999998876 455666654310000 001122
Q ss_pred HHHHHHHHHhhcCCCEEEEEcchhhccc
Q 002337 443 AALAQAFNTAQSYSPTILLLRDFDVFRN 470 (934)
Q Consensus 443 ~~L~~~f~~A~~~~P~IL~IDEID~L~~ 470 (934)
..+..+........|.++++|.++.+..
T Consensus 103 ~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 103 DHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred HHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 3444555555667899999999998765
No 128
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44 E-value=0.00053 Score=65.18 Aligned_cols=24 Identities=42% Similarity=0.645 Sum_probs=22.3
Q ss_pred CcceecCCCCCcchHHHHHHHHHc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++|+|+||||||||+++++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 589999999999999999999876
No 129
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.43 E-value=0.0013 Score=63.16 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=25.8
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhCCcE
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHV 425 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg~~~ 425 (934)
+.+.-|+|+|+|||||||+++.++...+...
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~~~ 42 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGYVH 42 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTCEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCCEE
Confidence 3455699999999999999999998877543
No 130
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=96.42 E-value=0.003 Score=64.49 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.2
Q ss_pred hcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 678 SSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 678 ~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++.+.++..+.+.||+|+||||++++++...
T Consensus 35 sl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 35 NLKIPAGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp EEEECTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhccc
Confidence 3467788999999999999999999998765
No 131
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.39 E-value=0.00076 Score=65.87 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=29.6
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
...|+|.||||+||||+|+.+|..++..++++ .+++
T Consensus 6 ~mrIiliG~PGSGKtT~a~~La~~~g~~~is~--gdll 41 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTVSSRITKHFELKHLSS--GDLL 41 (189)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHBCCEEEEH--HHHH
T ss_pred ceeEEEECCCCCCHHHHHHHHHHHHCCeEEcH--HHHH
Confidence 45789999999999999999999998776654 3444
No 132
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.37 E-value=0.00059 Score=66.67 Aligned_cols=40 Identities=20% Similarity=0.419 Sum_probs=31.2
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccccc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 723 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~ 723 (934)
+.+.-|+|.||||+||||+|+.+|+.++...+ +..+++..
T Consensus 6 ~~~~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~llr~ 45 (194)
T d3adka_ 6 KKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLLRA 45 (194)
T ss_dssp HTSCEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHhCCeeE--eccHHHHH
Confidence 34567889999999999999999999876665 44455443
No 133
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=96.37 E-value=0.0026 Score=64.98 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=27.1
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcC
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
..+.++..+.+.||+|+||||+++.++....
T Consensus 39 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 69 (255)
T d2hyda1 39 LSIEKGETVAFVGMSGGGKSTLINLIPRFYD 69 (255)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHTTTTTSSC
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHHhcCC
Confidence 4677889999999999999999999987653
No 134
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.37 E-value=0.00081 Score=62.34 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=24.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEEEecC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~I~~~ 431 (934)
-|+|+||||+||||+++.++.+. ..+..++..
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~-~~~~~~~~d 35 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKN-PGFYNINRD 35 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS-TTEEEECHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhC-CCCEEechH
Confidence 48899999999999999987764 345555543
No 135
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.33 E-value=0.00078 Score=64.96 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=27.0
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
..|+|.||||+||||+|+.+|..++..+++.
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCceEec
Confidence 4688999999999999999999998776654
No 136
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.33 E-value=0.00032 Score=66.62 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=23.6
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
+.-|+|.|+||+||||+|+++|..++.
T Consensus 6 g~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 6 GFTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 455889999999999999999998854
No 137
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.31 E-value=0.00081 Score=64.86 Aligned_cols=30 Identities=27% Similarity=0.481 Sum_probs=27.1
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.|+|.||||+||||+|+.+|..++..++++
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeH
Confidence 588999999999999999999998887764
No 138
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.28 E-value=0.0012 Score=65.38 Aligned_cols=27 Identities=26% Similarity=0.565 Sum_probs=24.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
|.+-|||||||||+|+.||.++|..++
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~i 32 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYL 32 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 567799999999999999999988644
No 139
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28 E-value=0.00091 Score=65.25 Aligned_cols=31 Identities=29% Similarity=0.486 Sum_probs=26.6
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.-|+|.||||+||||+|+.+|+.++...++.
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeh
Confidence 4578899999999999999999997766654
No 140
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.24 E-value=0.0028 Score=61.80 Aligned_cols=33 Identities=24% Similarity=0.499 Sum_probs=26.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhC---CcEEEEecC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLG---IHVVEYSCH 431 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg---~~~~~I~~~ 431 (934)
=|+|+|.||+||||+++.||+.++ .....++..
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEccc
Confidence 389999999999999999998874 455555543
No 141
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.22 E-value=0.001 Score=65.72 Aligned_cols=34 Identities=29% Similarity=0.474 Sum_probs=27.5
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
-|.+.||||+||+|+|+.||+.++.++++ ..+|+
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~iS--tGdLl 38 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLLD--SGAIY 38 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEE--HHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC--HHHHH
Confidence 46778999999999999999999877754 33444
No 142
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.21 E-value=0.004 Score=63.41 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=26.8
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.+.++..+.+.||+|+||||++++++...
T Consensus 35 l~i~~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 35 FTLRPGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhccc
Confidence 467788999999999999999999998765
No 143
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.20 E-value=0.0064 Score=60.10 Aligned_cols=72 Identities=21% Similarity=0.333 Sum_probs=43.7
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCcccc--------------------ccccchHHHHHHHHHH
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMA--------------------SSERKTSAALAQAFNT 451 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~--------------------~~~g~~e~~L~~~f~~ 451 (934)
+.+.-|+|+||+|+||||.+--+|..+ |..+..+.+...-. ....+....++...+.
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~ 86 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQA 86 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHH
Confidence 345568999999999999776677665 56666666542111 1112234455555555
Q ss_pred hhcCCCEEEEEcchh
Q 002337 452 AQSYSPTILLLRDFD 466 (934)
Q Consensus 452 A~~~~P~IL~IDEID 466 (934)
++...--+++||=.-
T Consensus 87 a~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 87 AKARNIDVLIADTAG 101 (211)
T ss_dssp HHHTTCSEEEECCCC
T ss_pred HHHcCCCEEEeccCC
Confidence 554444677777644
No 144
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.19 E-value=0.001 Score=64.68 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=28.2
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEecCcccc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 721 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~ 721 (934)
.-|+|.||||+||||.|+.+|+.++...++ ..+++
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i~--~g~ll 36 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLS--AGELL 36 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEEE--HHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceEc--HHHHH
Confidence 458899999999999999999999766554 34444
No 145
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.18 E-value=0.0044 Score=63.74 Aligned_cols=118 Identities=21% Similarity=0.281 Sum_probs=70.6
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCccccccc----------------cchhhhhhHHHHHHH
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELINMY----------------IGESEKNVRDIFQKA 739 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~~~----------------~Gese~~v~~lf~~A 739 (934)
.|+..++-..++||+|||||+++..++..+ +..+++++...-++.. ....|..+.-+-...
T Consensus 52 GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~ 131 (268)
T d1xp8a1 52 GGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLV 131 (268)
T ss_dssp SSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHH
T ss_pred CCccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHH
Confidence 466777778899999999999998875543 6778888864332210 111222222222223
Q ss_pred HhCCCcEEEeccccccccCCCCCCC----CchhHHHHHHhhhhhccCCcCCCCCEEEEEEcC
Q 002337 740 RSARPCVIFFDELDSLAPARGASGD----SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASN 797 (934)
Q Consensus 740 ~~~~p~vlfiDEid~l~~~r~~~~~----~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTN 797 (934)
+...+.+|++|=+.++.++..-.++ ..+...++++.+++.+-.+-. ..++.+|.+..
T Consensus 132 ~~~~~~liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~-~~~~~vi~tNQ 192 (268)
T d1xp8a1 132 RSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILS-KTGTAAIFINQ 192 (268)
T ss_dssp TTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHT-TTCCEEEEEEE
T ss_pred hcCCCcEEEEecccccccHHHHcccccchhHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEeE
Confidence 3457899999999999875442221 112345666776666555433 34566665543
No 146
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.14 E-value=0.0041 Score=63.84 Aligned_cols=116 Identities=25% Similarity=0.327 Sum_probs=65.1
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCcccccc--------------c--cchhhhhhHHHHHHH
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELINM--------------Y--IGESEKNVRDIFQKA 739 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~~~--------------~--~Gese~~v~~lf~~A 739 (934)
.|+..+.-..|+||||+|||+++-.++..+ +...++++...-+.. | ....|..+..+-...
T Consensus 49 GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~ 128 (263)
T d1u94a1 49 GGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALA 128 (263)
T ss_dssp SSEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHH
T ss_pred CCccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHH
Confidence 477777888999999999999998876544 667777775432211 0 111222332222334
Q ss_pred HhCCCcEEEeccccccccC---CCCCCC-CchhHHHHHHhhhhhccCCcCCCCCEEEEEE
Q 002337 740 RSARPCVIFFDELDSLAPA---RGASGD-SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 795 (934)
Q Consensus 740 ~~~~p~vlfiDEid~l~~~---r~~~~~-~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~a 795 (934)
+...+++|++|=+..+.++ ++..++ ..+...+.++.++..+-.+.. ..++.+|.+
T Consensus 129 ~~~~~~liViDSi~al~~~~e~~~~~~~~~~~~~a~~l~~~~~~l~~~~~-~~~~~vi~~ 187 (263)
T d1u94a1 129 RSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK-QSNTLLIFI 187 (263)
T ss_dssp HHTCCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHH-HHTCEEEEE
T ss_pred hcCCCCEEEEECccccccchhcccccccchHHHHHHHHHHHHHHHHHhhh-ccCceEEEE
Confidence 4577899999999888753 211111 122234455565554443322 124445543
No 147
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.13 E-value=0.00075 Score=66.69 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=31.9
Q ss_pred ccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 392 ~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+.++.+.-+.|.||+|+|||||++.+++.+.+.-++|..
T Consensus 22 ~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~ 60 (200)
T d1sgwa_ 22 MTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIY 60 (200)
T ss_dssp EEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEE
Confidence 334555559999999999999999999999887777644
No 148
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.11 E-value=0.0021 Score=60.23 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh---CCcEEEEe
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEYS 429 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el---g~~~~~I~ 429 (934)
-+.++|++|||||||++.+++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 37899999999999999999886 55555543
No 149
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.11 E-value=0.0011 Score=63.57 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=26.8
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.|+|.||||+||||+|+.+|+.++..+++.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceech
Confidence 578999999999999999999998877654
No 150
>d1cz5a2 d.31.1.1 (A:92-185) C-terminal domain of VAT-N, VAT-Nc {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.10 E-value=0.0026 Score=54.52 Aligned_cols=60 Identities=22% Similarity=0.097 Sum_probs=43.2
Q ss_pred HHHHHHHhhccCCCeeecCCEEEEecccCCCCccccccccccCCCCCceEEEEEEEEecCCCeEEEEeCCeeEEEEcC
Q 002337 273 KIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKVVAVEPSEETVLRVNCTKTALVLGG 350 (934)
Q Consensus 273 ~~~~~l~~~f~~~r~~~~gd~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~~~~~~~~~vd~~~T~lv~~~ 350 (934)
.+..+|++||.. |||.+||.|.|++-+. .+++.+.|+|++++|+..+++ -...|.+.+.+
T Consensus 24 ~~~~ylk~~L~g-rPV~~GD~i~v~~~~~---------------~g~~~i~F~Vv~t~P~g~~Vi--It~~TeI~i~~ 83 (94)
T d1cz5a2 24 GIEEYVQRALIR-RPMLEQDNISVPGLTL---------------AGQTGLLFKVVKTLPSKVPVE--IGEETKIEIRE 83 (94)
T ss_dssp SHHHHHHHHHSS-CEECTTCEECCSSCCC---------------SSCCCCSEEEEEESSSSSCEE--CCTTCEEEECS
T ss_pred CHHHHHHHHHcC-CCCcCCCEEEEeeccc---------------cCCceEeEEEEEEeCCCCeEE--ECCCeEEEEec
Confidence 468899999964 9999999999975321 235779999999999754433 24456665543
No 151
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.02 E-value=0.0027 Score=60.87 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=27.4
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.|.-|++.|+||+||||+|+.++...+..+++-
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~i~~ 45 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNR 45 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCCEEEch
Confidence 466788999999999999999998877655543
No 152
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.02 E-value=0.0058 Score=63.24 Aligned_cols=30 Identities=27% Similarity=0.339 Sum_probs=26.9
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
..+.++..+.+.||+|+||||++++++..+
T Consensus 57 l~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 57 LNIEKGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp EEECTTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhCCC
Confidence 466788999999999999999999999876
No 153
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.02 E-value=0.0014 Score=64.86 Aligned_cols=29 Identities=28% Similarity=0.620 Sum_probs=25.3
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEE
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLS 714 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~ 714 (934)
.|.+.||||+||||+|+.||.++++++++
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 35567999999999999999999888765
No 154
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.99 E-value=0.0016 Score=61.83 Aligned_cols=26 Identities=27% Similarity=0.469 Sum_probs=23.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~ 423 (934)
+-|++.|+|||||||+++.++..++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 34899999999999999999999854
No 155
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.91 E-value=0.01 Score=59.35 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=26.8
Q ss_pred hcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 678 SSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 678 ~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++.+.++.-+.|.||+||||||+.++++...
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 25 NLNIKEGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEcCCCEEEEECCCCCCcchhhHhccCCC
Confidence 3466778899999999999999999998754
No 156
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.89 E-value=0.0098 Score=58.75 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=22.7
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
+.|.-|+|+||+|+||||.+--+|..+ |..+..|++.
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~D 49 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGAD 49 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEee
Confidence 455668999999999999766666555 5566555554
No 157
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.89 E-value=0.0014 Score=60.69 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=24.9
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEecCccc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 720 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l 720 (934)
-|++.||||+||||+|+.++.... ++..++..++
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~ 37 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDY 37 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC-CCEEechHHH
Confidence 377899999999999999876542 3555554343
No 158
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.79 E-value=0.00047 Score=66.73 Aligned_cols=28 Identities=29% Similarity=0.309 Sum_probs=23.8
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLN 711 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~ 711 (934)
+.-|+|.|+||+||||+|+++|..++..
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 4567789999999999999999987543
No 159
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.75 E-value=0.0077 Score=59.67 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=51.8
Q ss_pred HhhcCCCCCCcceecCCCCCcchHHHHHHHHHc---------CCcEEEecCcccccc---------c-------------
Q 002337 676 LFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC---------SLNFLSVKGPELINM---------Y------------- 724 (934)
Q Consensus 676 ~~~~~~~~~~~iLl~GppGtGKT~lakalA~~~---------~~~~i~v~~~~l~~~---------~------------- 724 (934)
++..|+.++.-++|+||||+|||+++..++... +.+.++++...-... +
T Consensus 26 ll~GGi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (251)
T d1szpa2 26 LLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAY 105 (251)
T ss_dssp HHTSSEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEE
T ss_pred hhCCCCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHHHHHHhcCCchhhhhcceEE
Confidence 345678889999999999999999999886432 345566554321110 0
Q ss_pred --c---chhhhhhHHHHHHHHhCCCcEEEeccccccccC
Q 002337 725 --I---GESEKNVRDIFQKARSARPCVIFFDELDSLAPA 758 (934)
Q Consensus 725 --~---Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~ 758 (934)
. -........+........+.++++|.+..+...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ds~~~~~~~ 144 (251)
T d1szpa2 106 ARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRT 144 (251)
T ss_dssp EECCSTTTHHHHHHHTHHHHHHSCEEEEEEETGGGGGSC
T ss_pred EeccchhHHHHHHHHHHHHhhccccceeeehhhhhhhhh
Confidence 0 001112233444455677788899988777643
No 160
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.73 E-value=0.0017 Score=67.42 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=36.6
Q ss_pred ccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 385 p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
|.++.-.+.+..+.-+.|+||+|+|||||++++++.+.+.-+.|..
T Consensus 50 pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~ 95 (281)
T d1r0wa_ 50 PVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKH 95 (281)
T ss_dssp EEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEEC
T ss_pred eEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEE
Confidence 4444445566777889999999999999999999998877666643
No 161
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.65 E-value=0.008 Score=61.68 Aligned_cols=118 Identities=22% Similarity=0.341 Sum_probs=68.6
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHH---HcCCcEEEecCcccccc-c---cc--------hhhhhhHHHHHHH----
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVAT---ECSLNFLSVKGPELINM-Y---IG--------ESEKNVRDIFQKA---- 739 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~---~~~~~~i~v~~~~l~~~-~---~G--------ese~~v~~lf~~A---- 739 (934)
.|+..+.-..|+||+|+|||++|-.++. ..+...++++...-++. | .| -....+.++++.+
T Consensus 55 gG~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~ 134 (269)
T d1mo6a1 55 GGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLI 134 (269)
T ss_dssp SSBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHH
T ss_pred CCcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHH
Confidence 5778888889999999999999876644 34777888886542221 0 01 0011223333333
Q ss_pred HhCCCcEEEeccccccccCCCCC---C-CCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCC
Q 002337 740 RSARPCVIFFDELDSLAPARGAS---G-DSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 798 (934)
Q Consensus 740 ~~~~p~vlfiDEid~l~~~r~~~---~-~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNr 798 (934)
+...+++|++|=+.++.++..-. + ..-+...+.++.++..+-.+.. ..++.+|.+ |+
T Consensus 135 ~~~~~~liIiDSi~al~~~~E~e~~~~~~~~~~~a~~l~~~l~~l~~~~~-~~~~~vi~~-NQ 195 (269)
T d1mo6a1 135 RSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN-NSGTTAIFI-NQ 195 (269)
T ss_dssp HTTCEEEEEEECSTTCCCHHHHC-------CCHHHHHHHHHHHHHHHHHH-HHTCEEEEE-EC
T ss_pred hcCCCCEEEEecccccccHHHhccccccchHHHHHHHHHHHHHHHHHHHh-hcCchhhhh-he
Confidence 35678899999999998642211 1 1112234566666665544432 235566655 54
No 162
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.64 E-value=0.0079 Score=59.23 Aligned_cols=82 Identities=20% Similarity=0.121 Sum_probs=51.3
Q ss_pred hhcCCCCCCcceecCCCCCcchHHHHHHHHH----cCCcEEEecCcccccc-----------------------------
Q 002337 677 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATE----CSLNFLSVKGPELINM----------------------------- 723 (934)
Q Consensus 677 ~~~~~~~~~~iLl~GppGtGKT~lakalA~~----~~~~~i~v~~~~l~~~----------------------------- 723 (934)
+..|+.++.-++|+|+||+|||+++..+|.. .+..+++++..+-...
T Consensus 19 l~GGi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (242)
T d1tf7a1 19 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPD 98 (242)
T ss_dssp TTSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCC
T ss_pred hcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccc
Confidence 4458889999999999999999998765432 2445555543210000
Q ss_pred -----cc--chhhhhhHHHHHHHHhCCCcEEEeccccccccC
Q 002337 724 -----YI--GESEKNVRDIFQKARSARPCVIFFDELDSLAPA 758 (934)
Q Consensus 724 -----~~--Gese~~v~~lf~~A~~~~p~vlfiDEid~l~~~ 758 (934)
.. ......+..+-...+...|.++++|-+..+...
T Consensus 99 ~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~ 140 (242)
T d1tf7a1 99 PEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQ 140 (242)
T ss_dssp SSCCSCCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTT
T ss_pred hhhhhhhccccHHHHHHHHHHHHHhhccchhhhhHHHHHHHh
Confidence 00 011122344455556678899999999888743
No 163
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=95.58 E-value=0.02 Score=58.44 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=50.1
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccc----------------cccchHHHHHHHHHHhhc
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMAS----------------SERKTSAALAQAFNTAQS 454 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~----------------~~g~~e~~L~~~f~~A~~ 454 (934)
+..+.-+.|+||||+|||+++-.+|... |...+.++...-+.. .....+..+..+-...+.
T Consensus 51 i~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~~ 130 (263)
T d1u94a1 51 LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARS 130 (263)
T ss_dssp EETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHH
T ss_pred ccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHhc
Confidence 3556679999999999999988887665 566777776632211 011123333333333344
Q ss_pred CCCEEEEEcchhhccc
Q 002337 455 YSPTILLLRDFDVFRN 470 (934)
Q Consensus 455 ~~P~IL~IDEID~L~~ 470 (934)
..+.++++|-+..+.+
T Consensus 131 ~~~~liViDSi~al~~ 146 (263)
T d1u94a1 131 GAVDVIVVDSVAALTP 146 (263)
T ss_dssp TCCSEEEEECGGGCCC
T ss_pred CCCCEEEEECcccccc
Confidence 6678999999988875
No 164
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.58 E-value=0.0022 Score=67.97 Aligned_cols=73 Identities=22% Similarity=0.338 Sum_probs=52.7
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcC--CcEEEec-Ccccc-------ccccchhhhhhHHHHHHHHhCCCcEEEe
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECS--LNFLSVK-GPELI-------NMYIGESEKNVRDIFQKARSARPCVIFF 749 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~--~~~i~v~-~~~l~-------~~~~Gese~~v~~lf~~A~~~~p~vlfi 749 (934)
.++.+.++++.||+|+|||++.++++.... ..++.+- ..|+. ..+.+..+-...++++.+....|..|++
T Consensus 162 ~v~~~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iiv 241 (323)
T d1g6oa_ 162 GIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIIL 241 (323)
T ss_dssp HHHHTCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEE
T ss_pred HHHhCCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccC
Confidence 445568999999999999999999998774 3455543 22332 1122333445678888888899999999
Q ss_pred ccc
Q 002337 750 DEL 752 (934)
Q Consensus 750 DEi 752 (934)
.|+
T Consensus 242 gEi 244 (323)
T d1g6oa_ 242 GEL 244 (323)
T ss_dssp SCC
T ss_pred Ccc
Confidence 998
No 165
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.57 E-value=0.016 Score=52.55 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=25.9
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~ 717 (934)
....++.+|+|+|||+++-.++.+.+..++.+-.
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P 41 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNP 41 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHHHTTTCCEEEEES
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcC
Confidence 3567899999999999887766666766665554
No 166
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=95.56 E-value=0.0033 Score=63.76 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=27.0
Q ss_pred hcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 678 SSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 678 ~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++.+.++..+.+.||+|+||||+++.++...
T Consensus 22 sl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 22 SFEAQPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp EEEECTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 3467788899999999999999999998765
No 167
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=95.52 E-value=0.0023 Score=65.45 Aligned_cols=38 Identities=26% Similarity=0.306 Sum_probs=29.9
Q ss_pred cccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 391 VLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 391 ~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
.+.+..+..+.|+||+|||||||++.+++.+.+.-+.|
T Consensus 35 sl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I 72 (253)
T d3b60a1 35 NLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHI 72 (253)
T ss_dssp EEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEE
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEE
Confidence 34455566699999999999999999998876655544
No 168
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=95.49 E-value=0.018 Score=56.92 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=26.4
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
..|.-|+|+||+|+||||.+--+|..+ |..+..|.+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~D 48 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAAD 48 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeec
Confidence 445568999999999999766666555 5555555544
No 169
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.47 E-value=0.0023 Score=67.80 Aligned_cols=70 Identities=13% Similarity=0.229 Sum_probs=47.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCC--cEEEEe-cCcccc-------ccccchHHHHHHHHHHhhcCCCEEEEEcchh
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGI--HVVEYS-CHNLMA-------SSERKTSAALAQAFNTAQSYSPTILLLRDFD 466 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~--~~~~I~-~~~L~~-------~~~g~~e~~L~~~f~~A~~~~P~IL~IDEID 466 (934)
+++||+.||+|+||||+++++++.... .++.|. ..++.- .........+..++..+.+..|-.+++.|+-
T Consensus 166 ~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCccC
Confidence 456999999999999999999998853 344442 222210 0111222345667777888899999999974
No 170
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=95.42 E-value=0.0022 Score=65.03 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=30.9
Q ss_pred cccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 391 VLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 391 ~~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
.+.++.+..+.++||+|+|||||++++++.+.+.-+.|
T Consensus 23 sl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I 60 (241)
T d2pmka1 23 NLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQV 60 (241)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEE
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEE
Confidence 34456666799999999999999999999887765554
No 171
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.41 E-value=0.0026 Score=64.93 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=31.0
Q ss_pred ccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEe
Q 002337 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429 (934)
Q Consensus 392 ~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~ 429 (934)
+.++.+.-+.|+||+|||||||++.+++.+.+.-+.|.
T Consensus 35 l~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~ 72 (251)
T d1jj7a_ 35 FTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLL 72 (251)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEE
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEE
Confidence 34455566999999999999999999999887766553
No 172
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=95.39 E-value=0.0035 Score=63.31 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=32.2
Q ss_pred ccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 392 ~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+.+..+.-+.|.||+|+|||||++++++.+.+.-+.|.-
T Consensus 23 ~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i 61 (238)
T d1vpla_ 23 FEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTV 61 (238)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 344555669999999999999999999999888776654
No 173
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.38 E-value=0.041 Score=55.86 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=30.7
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHH----cCCcEEEec
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATE----CSLNFLSVK 716 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~----~~~~~i~v~ 716 (934)
.|+.++.-+++.|+||+|||+++..+|.. .+.++..++
T Consensus 30 ~G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s 71 (277)
T d1cr2a_ 30 LGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71 (277)
T ss_dssp CSBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred cCCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEee
Confidence 68998888999999999999998887643 366666665
No 174
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.37 E-value=0.016 Score=56.93 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=25.6
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
+.-++|+||+|+||||.+--+|..+ |..+..|++.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~D 43 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGD 43 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3568999999999999766667665 5556655544
No 175
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=95.34 E-value=0.0072 Score=61.07 Aligned_cols=30 Identities=30% Similarity=0.294 Sum_probs=26.2
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.+.++.-+.|.||+|+||||+.++++...
T Consensus 27 ~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 27 LKVPRGQIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 456778889999999999999999998765
No 176
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=95.32 E-value=0.0032 Score=63.76 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=31.2
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
.+..+.-+.|.||+|+|||||++++++.+.+.-+.|..
T Consensus 28 ~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~ 65 (240)
T d1ji0a_ 28 KVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 65 (240)
T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred EECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEe
Confidence 34455559999999999999999999999887776643
No 177
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.30 E-value=0.0034 Score=59.78 Aligned_cols=24 Identities=38% Similarity=0.577 Sum_probs=21.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~ 423 (934)
|++.|+||+||||+++.+|..++.
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~ 27 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999854
No 178
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.29 E-value=0.0068 Score=59.85 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=30.2
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHh----CCcEEEEecCc
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRL----GIHVVEYSCHN 432 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~el----g~~~~~I~~~~ 432 (934)
.+.-|.|+|.||+||||+++.++..+ +.+.+.+++..
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~ 63 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDN 63 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchH
Confidence 34569999999999999999999876 56777777654
No 179
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.28 E-value=0.034 Score=56.81 Aligned_cols=77 Identities=10% Similarity=0.032 Sum_probs=50.7
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccc----------------cccchHHHHHHHHHHhhcC
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMAS----------------SERKTSAALAQAFNTAQSY 455 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~----------------~~g~~e~~L~~~f~~A~~~ 455 (934)
..++-+.++||+|||||+++-.++... |..++.++...-+.. .....+..+..+-...+..
T Consensus 55 p~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~~~ 134 (268)
T d1xp8a1 55 PRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSG 134 (268)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTT
T ss_pred cCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHhcC
Confidence 455668999999999999998887665 667788876632211 0112333333332333345
Q ss_pred CCEEEEEcchhhcccc
Q 002337 456 SPTILLLRDFDVFRNL 471 (934)
Q Consensus 456 ~P~IL~IDEID~L~~~ 471 (934)
.+.++++|-+.++.+.
T Consensus 135 ~~~liIiDSi~al~~r 150 (268)
T d1xp8a1 135 AIDVVVVDSVAALTPR 150 (268)
T ss_dssp CCSEEEEECTTTCCCS
T ss_pred CCcEEEEecccccccH
Confidence 6889999999998863
No 180
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.26 E-value=0.0055 Score=59.19 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=24.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
+.|+|+||+|+|||||++.++++....+.
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~~ 30 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFG 30 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCccee
Confidence 34999999999999999999999754443
No 181
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.26 E-value=0.038 Score=56.15 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=27.2
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh----CCcEEEEecC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL----GIHVVEYSCH 431 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el----g~~~~~I~~~ 431 (934)
+.-+++.|+||+|||+++..+|..+ |.++..++..
T Consensus 35 G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 35 GEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeec
Confidence 3348999999999999988887542 6777777654
No 182
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.23 E-value=0.006 Score=59.17 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=25.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.|.|.||+|+|||||++.++.+.+..+..
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~~ 30 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFGF 30 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCceeE
Confidence 48999999999999999999998755443
No 183
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=95.23 E-value=0.022 Score=53.98 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=20.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|.|.+|+|||||++++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4999999999999999999865
No 184
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.23 E-value=0.0076 Score=58.50 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=22.0
Q ss_pred CcceecCCCCCcchHHHHHHHHHcC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
.=|++.|.||+||||+|+++|+.++
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~ 27 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLN 27 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3478999999999999999998764
No 185
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.015 Score=57.43 Aligned_cols=71 Identities=18% Similarity=0.211 Sum_probs=41.9
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCcccc-------c---------cccchh----hhhhHHHHHHH
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPELI-------N---------MYIGES----EKNVRDIFQKA 739 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l~-------~---------~~~Ges----e~~v~~lf~~A 739 (934)
.|.-++|.||+|+||||.+--+|..+ +..+.-+.+...- . -+...+ ...+++..+.+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a 87 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 87 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHHH
Confidence 35568899999999988776677554 4444444431110 0 012222 23355556666
Q ss_pred HhCCCcEEEecccc
Q 002337 740 RSARPCVIFFDELD 753 (934)
Q Consensus 740 ~~~~p~vlfiDEid 753 (934)
+...-.+||||=..
T Consensus 88 ~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 88 KARNIDVLIADTAG 101 (211)
T ss_dssp HHTTCSEEEECCCC
T ss_pred HHcCCCEEEeccCC
Confidence 66666899999643
No 186
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.22 E-value=0.016 Score=56.99 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=19.7
Q ss_pred CCcceecCCCCCcchHHHHHHHHHc
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.-++|.||+|+||||.+--+|..+
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~ 30 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYY 30 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
Confidence 5667899999999988766666654
No 187
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.16 E-value=0.004 Score=63.54 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=30.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+.-+.|.||+|+|||||++++++.+.+.-+.|..
T Consensus 27 v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~ 63 (254)
T d1g6ha_ 27 VNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYF 63 (254)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEE
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEE
Confidence 4445559999999999999999999999887666543
No 188
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.13 E-value=0.03 Score=50.52 Aligned_cols=34 Identities=26% Similarity=0.247 Sum_probs=26.3
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~ 431 (934)
...+|.+|+|+|||+++-.++.+.|..++.+...
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~ 42 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPS 42 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcCh
Confidence 4579999999999999877777777666655443
No 189
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=95.13 E-value=0.0097 Score=59.48 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=26.4
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.+.++.-+.|.||+|+||||+.++++...
T Consensus 21 ~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 21 LKVESGEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp EEECTTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHhcCc
Confidence 456778889999999999999999999865
No 190
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.05 E-value=0.019 Score=62.28 Aligned_cols=67 Identities=13% Similarity=0.288 Sum_probs=46.1
Q ss_pred EEEECCCCCcHHHHHHHHHHHhC---CcEEEEecC-ccc--c----ccccchHHHHHHHHHHhhcCCCEEEEEcchh
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLG---IHVVEYSCH-NLM--A----SSERKTSAALAQAFNTAQSYSPTILLLRDFD 466 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg---~~~~~I~~~-~L~--~----~~~g~~e~~L~~~f~~A~~~~P~IL~IDEID 466 (934)
||+.||+|+||||++.++.+++. .+++.+.-+ +.. + .............+..+.+..|-||++.|+-
T Consensus 161 iLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiR 237 (401)
T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIR 237 (401)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCC
T ss_pred EEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcC
Confidence 89999999999999999999873 456665433 111 0 0011122235566677777899999999986
No 191
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.01 E-value=0.026 Score=55.44 Aligned_cols=34 Identities=26% Similarity=0.273 Sum_probs=25.7
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
.-++|+||+|+||||.+--+|..+ |..+..+++.
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~D 47 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAAD 47 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecc
Confidence 347889999999999877777665 5666666654
No 192
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=95.01 E-value=0.033 Score=59.40 Aligned_cols=20 Identities=35% Similarity=0.536 Sum_probs=16.6
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~ 419 (934)
.+|.||||||||+++..+..
T Consensus 166 ~vI~G~pGTGKTt~i~~~l~ 185 (359)
T d1w36d1 166 SVISGGPGTGKTTTVAKLLA 185 (359)
T ss_dssp EEEECCTTSTHHHHHHHHHH
T ss_pred EEEEcCCCCCceehHHHHHH
Confidence 79999999999998765433
No 193
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.01 E-value=0.0044 Score=59.44 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=25.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhC---CcEEEEe
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLG---IHVVEYS 429 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg---~~~~~I~ 429 (934)
.-|.+.||+|+||||+|+.++..++ .....++
T Consensus 23 ~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~ 57 (198)
T d1rz3a_ 23 LVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFH 57 (198)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhccccccceecc
Confidence 3478999999999999999998774 3444444
No 194
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=95.00 E-value=0.0023 Score=64.98 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=28.6
Q ss_pred ccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 392 ~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
+.+.++.-+.|+||+|+|||||++.+++.+.+.-++
T Consensus 23 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~ 58 (242)
T d1mv5a_ 23 FEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGE 58 (242)
T ss_dssp EEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSC
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCE
Confidence 334555569999999999999999999988665443
No 195
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=94.99 E-value=0.021 Score=56.02 Aligned_cols=77 Identities=16% Similarity=0.087 Sum_probs=46.9
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHH----hCCcEEEEecCcccc-------c--------------------------
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSCHNLMA-------S-------------------------- 436 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~e----lg~~~~~I~~~~L~~-------~-------------------------- 436 (934)
+.++.-++|+|+||+|||+++..+|.. -+..+..++...-.. .
T Consensus 23 i~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (242)
T d1tf7a1 23 LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQ 102 (242)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSCC
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccchhhh
Confidence 456777999999999999998765432 244555555431000 0
Q ss_pred ---cccchHHHHHHHHHHhhcCCCEEEEEcchhhccc
Q 002337 437 ---SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470 (934)
Q Consensus 437 ---~~g~~e~~L~~~f~~A~~~~P~IL~IDEID~L~~ 470 (934)
........+..+........|.++++|.++.+..
T Consensus 103 ~~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~ 139 (242)
T d1tf7a1 103 EVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQ 139 (242)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTST
T ss_pred hhhccccHHHHHHHHHHHHHhhccchhhhhHHHHHHH
Confidence 0001122334444445566788999999988764
No 196
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=94.92 E-value=0.0082 Score=53.93 Aligned_cols=22 Identities=36% Similarity=0.326 Sum_probs=18.1
Q ss_pred CCCCCcceecCCCCCcchHHHH
Q 002337 681 LRKRSGVLLYGPPGTGKTLLAK 702 (934)
Q Consensus 681 ~~~~~~iLl~GppGtGKT~lak 702 (934)
++.+..++|++|||+|||..+-
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHH
T ss_pred HHcCCcEEEEcCCCCChhHHHH
Confidence 4567889999999999997663
No 197
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.90 E-value=0.057 Score=53.94 Aligned_cols=67 Identities=21% Similarity=0.222 Sum_probs=39.8
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh-----CC----cEEE----------EecCccccc---cccchHHHHHHHHHHhhcC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL-----GI----HVVE----------YSCHNLMAS---SERKTSAALAQAFNTAQSY 455 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el-----g~----~~~~----------I~~~~L~~~---~~g~~e~~L~~~f~~A~~~ 455 (934)
+.++|+|||.+||||++|.+|--. |. .... +...+-... ....-...+..+++.+.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~-- 119 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNAT-- 119 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCC--
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHHHHHHHHHHHhcc--
Confidence 568999999999999999987653 32 1222 222221111 11122345666676665
Q ss_pred CCEEEEEcchh
Q 002337 456 SPTILLLRDFD 466 (934)
Q Consensus 456 ~P~IL~IDEID 466 (934)
..++++|||+-
T Consensus 120 ~~sLvliDE~~ 130 (234)
T d1wb9a2 120 EYSLVLMDEIG 130 (234)
T ss_dssp TTEEEEEESCC
T ss_pred cccEEeecccc
Confidence 35899999975
No 198
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=94.88 E-value=0.011 Score=59.66 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=26.5
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcC
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
+.+.++.-+-|.||+|+||||+.++++....
T Consensus 23 ~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 23 FEIEEGEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3566778888999999999999999998763
No 199
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.85 E-value=0.015 Score=57.37 Aligned_cols=27 Identities=30% Similarity=0.293 Sum_probs=16.8
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.|.-++|.||+|+||||.+--+|..+
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~ 36 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFY 36 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 346678899999999988766666544
No 200
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.83 E-value=0.045 Score=55.89 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=50.7
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCccccc----------------cccchHHHHHHHHHHhh
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNLMAS----------------SERKTSAALAQAFNTAQ 453 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L~~~----------------~~g~~e~~L~~~f~~A~ 453 (934)
++..+.-+.++||+|+|||+++-.++... |...+.|+...-+.. .....+..+..+-...+
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~ 135 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIR 135 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHh
Confidence 34667779999999999999987665543 777788877642211 01112333322222233
Q ss_pred cCCCEEEEEcchhhcccc
Q 002337 454 SYSPTILLLRDFDVFRNL 471 (934)
Q Consensus 454 ~~~P~IL~IDEID~L~~~ 471 (934)
...+.++++|-+.++.+.
T Consensus 136 ~~~~~liIiDSi~al~~~ 153 (269)
T d1mo6a1 136 SGALDIVVIDSVAALVPR 153 (269)
T ss_dssp TTCEEEEEEECSTTCCCH
T ss_pred cCCCCEEEEecccccccH
Confidence 456789999999988863
No 201
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=94.79 E-value=0.037 Score=51.05 Aligned_cols=22 Identities=32% Similarity=0.613 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|.|++|+|||||++++.+.
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999999754
No 202
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=94.78 E-value=0.0032 Score=64.33 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=29.0
Q ss_pred ccCCCCceEEEECCCCCcHHHHHHHHHHHhCCcEEEE
Q 002337 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEY 428 (934)
Q Consensus 392 ~~~~~~~~VLL~GppGtGKTtLaralA~elg~~~~~I 428 (934)
+.++.+.-+.|+||+|+|||||++.+++...+.-+.|
T Consensus 39 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I 75 (255)
T d2hyda1 39 LSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 75 (255)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHHhcCCcccccc
Confidence 3445556699999999999999999998876654444
No 203
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=94.74 E-value=0.014 Score=54.85 Aligned_cols=27 Identities=33% Similarity=0.523 Sum_probs=24.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCc
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIH 424 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~ 424 (934)
.-|+|.|+=|+||||++|.+++.+|..
T Consensus 34 ~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred eEEEEecCCCccHHHHHHHHHhhcccc
Confidence 349999999999999999999999864
No 204
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.64 E-value=0.0052 Score=58.11 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=22.5
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
+-|++.|+||+||||+++.++..++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999988743
No 205
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.62 E-value=0.014 Score=54.67 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=25.6
Q ss_pred EEEECCCCCcHHHHHHHHHHHh---CCcEEEEec
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL---GIHVVEYSC 430 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el---g~~~~~I~~ 430 (934)
+.+.|++|+|||||+..++.+| |..+..+..
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~ 37 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKH 37 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 5799999999999999999887 566666643
No 206
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.57 E-value=0.037 Score=54.33 Aligned_cols=33 Identities=33% Similarity=0.267 Sum_probs=22.8
Q ss_pred CCcceecCCCCCcchHHHHHHHHHc---CCcEEEec
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVK 716 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~ 716 (934)
+.-++|.||+|+||||.+--+|..+ +..+.-+.
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit 45 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVA 45 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 3446889999999998777776554 44444333
No 207
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.45 E-value=0.044 Score=54.78 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=54.4
Q ss_pred CcceecCCCCCcchHHHHHHHHHc-----CC----c----------EEEecCcccccc---ccchhhhhhHHHHHHHHhC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC-----SL----N----------FLSVKGPELINM---YIGESEKNVRDIFQKARSA 742 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~-----~~----~----------~i~v~~~~l~~~---~~Gese~~v~~lf~~A~~~ 742 (934)
+.+++.||+..|||++.|.+|-.. |. . |..+...|-+.. .+...-..++.+++.+.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~-- 119 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNAT-- 119 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCC--
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHHHHHHHHHHHhcc--
Confidence 567899999999999999986532 21 1 122322222111 11122234666777654
Q ss_pred CCcEEEeccccccccCCCCCCCCchhHHHHHHhhhhhccCCcCCCCCEEEEEEcCCCCCCC
Q 002337 743 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 803 (934)
Q Consensus 743 ~p~vlfiDEid~l~~~r~~~~~~~~~~~~v~~~lL~~ldg~~~~~~~v~vI~aTNrp~~lD 803 (934)
..+++++||+-+- ....++ ..+...++..+.. ..+..+|.||...+...
T Consensus 120 ~~sLvliDE~~~g-----T~~~eg---~~l~~a~l~~l~~----~~~~~~i~tTH~~~l~~ 168 (234)
T d1wb9a2 120 EYSLVLMDEIGRG-----TSTYDG---LSLAWACAENLAN----KIKALTLFATHYFELTQ 168 (234)
T ss_dssp TTEEEEEESCCCC-----SSSSHH---HHHHHHHHHHHHH----TTCCEEEEECSCGGGGG
T ss_pred cccEEeecccccC-----CChhhh---hHHHHHhhhhhhc----cccceEEEecchHHHhh
Confidence 3479999998432 222222 1233333333211 13456777888765443
No 208
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=94.45 E-value=0.024 Score=61.48 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=50.6
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcC---CcEEEecCc-ccccc------ccchhhhhhHHHHHHHHhCCCcEEEeccc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECS---LNFLSVKGP-ELINM------YIGESEKNVRDIFQKARSARPCVIFFDEL 752 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~---~~~i~v~~~-~l~~~------~~Gese~~v~~lf~~A~~~~p~vlfiDEi 752 (934)
+..-+|+.||+|+||||+..++..+.+ .+++.+-.| |..-. +.+..........+.+....|.||++.|+
T Consensus 157 ~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEi 236 (401)
T d1p9ra_ 157 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEI 236 (401)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCC
T ss_pred hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCc
Confidence 345567899999999999999887763 457776643 33211 12233345677777888899999999998
Q ss_pred cc
Q 002337 753 DS 754 (934)
Q Consensus 753 d~ 754 (934)
..
T Consensus 237 Rd 238 (401)
T d1p9ra_ 237 RD 238 (401)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 209
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.43 E-value=0.012 Score=56.39 Aligned_cols=26 Identities=38% Similarity=0.538 Sum_probs=22.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg 422 (934)
++-|+|.||+|+||||+++.++++..
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 44589999999999999999998864
No 210
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=94.33 E-value=0.0064 Score=61.11 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=27.8
Q ss_pred CCCccccCCCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 387 LCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 387 l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
+++-.+.++.+.-+.|.||+|+|||||++++++..
T Consensus 15 l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 15 LGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp SCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSC
T ss_pred ecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 34444555666779999999999999999999843
No 211
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.25 E-value=0.0091 Score=58.89 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=30.9
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHc----CCcEEEecCccc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATEC----SLNFLSVKGPEL 720 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~----~~~~i~v~~~~l 720 (934)
.+.-|.|.|.||+|||++|++++..+ +.+++.+++.++
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i 64 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 64 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH
Confidence 35678999999999999999998654 668888887554
No 212
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.12 E-value=0.0098 Score=57.26 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=27.9
Q ss_pred hhcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 677 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 677 ~~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+..|+.++.-++++||||+|||+++..+|...
T Consensus 16 l~GGi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 16 LQGGIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp TTTSEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred hcCCCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44588889999999999999999999988764
No 213
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.10 E-value=0.014 Score=57.27 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=22.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~ 423 (934)
-|.+.|++|+||||+++.++..++.
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhch
Confidence 3789999999999999999999864
No 214
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.10 E-value=0.015 Score=56.24 Aligned_cols=30 Identities=40% Similarity=0.456 Sum_probs=25.5
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.|+|.||+|+|||++++.+++..+..|..+
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~~~ 31 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFGFS 31 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEEEC
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCceeEE
Confidence 488999999999999999999887665443
No 215
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=94.06 E-value=0.023 Score=60.75 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=16.3
Q ss_pred CcceecCCCCCcchHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAV 704 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakal 704 (934)
.-.++.||||||||+++..+
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHH
Confidence 45788999999999887543
No 216
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.05 E-value=0.013 Score=56.24 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=24.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
+.++.-++++||||+|||+++..+|...
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4667779999999999999999998765
No 217
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=94.05 E-value=0.0096 Score=55.49 Aligned_cols=31 Identities=26% Similarity=0.181 Sum_probs=24.4
Q ss_pred cceecCCCCCcchHHHHHHHHHc---CCcEEEec
Q 002337 686 GVLLYGPPGTGKTLLAKAVATEC---SLNFLSVK 716 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~---~~~~i~v~ 716 (934)
-+.+.|++|+|||||++.+++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 36789999999999999999765 55554444
No 218
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.94 E-value=0.015 Score=55.88 Aligned_cols=29 Identities=34% Similarity=0.534 Sum_probs=24.9
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEE
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFL 713 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i 713 (934)
+.|+|.||+|+|||++++.++++....|.
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~~ 30 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFG 30 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCccee
Confidence 45899999999999999999998765554
No 219
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=93.89 E-value=0.036 Score=54.57 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=20.8
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
.+|.-++|.||+|+||||.+--+|..+
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 456678999999999988766666544
No 220
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.86 E-value=0.11 Score=48.31 Aligned_cols=22 Identities=32% Similarity=0.617 Sum_probs=19.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|.|++|+|||||++++.+.
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999754
No 221
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=93.81 E-value=0.027 Score=57.84 Aligned_cols=23 Identities=26% Similarity=0.457 Sum_probs=20.5
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
.-+.+||..|+|||++|+.+.+.
T Consensus 45 ~~v~I~GmgGiGKTtLA~~v~~~ 67 (277)
T d2a5yb3 45 FFLFLHGRAGSGKSVIASQALSK 67 (277)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHh
Confidence 45779999999999999999876
No 222
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.69 E-value=0.088 Score=47.85 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=19.7
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|+||+|||+|.+.+...
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4789999999999999998754
No 223
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.60 E-value=0.012 Score=58.18 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=23.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHH
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~e 420 (934)
+..+.-++|+||||||||+++-.+|..
T Consensus 31 i~~G~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTT
T ss_pred CcCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 567778999999999999999888754
No 224
>d1e32a1 b.52.2.3 (A:21-106) Membrane fusion ATPase p97 N-terminal domain , P97-Nn {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.52 E-value=0.038 Score=46.23 Aligned_cols=47 Identities=28% Similarity=0.279 Sum_probs=39.7
Q ss_pred ccCceEEeCHhhHhhccCCcccchhheecCccceeEEEEEecCCCCCCCC
Q 002337 171 LDRQVAYLSPLLAFNLDLHISSLKFLVHQGKEVLESLFIAKVDDGTSGQD 220 (934)
Q Consensus 171 ~~~~~~~lsp~~~~nL~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 220 (934)
-|+++|+|+|..|..||+..| |.+.++|+++..++++...++ +++.+
T Consensus 14 ~D~~iarl~p~~m~~Lgl~~G--D~V~I~Gkr~t~av~~~~~~~-d~~~g 60 (86)
T d1e32a1 14 EDNSVVSLSQPKMDELQLFRG--DTVLLKGKKRREAVCIVLSDD-TCSDE 60 (86)
T ss_dssp CCTTEEEECHHHHHHTTCCTT--CEEEEECSTTCEEEEEEEECT-TSCSS
T ss_pred CCCCEEEECHHHHHHcCCCCC--CEEEEEcCCceeEEEEEeccC-CCCCC
Confidence 357899999999999999999 679999999999999877655 44443
No 225
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=93.46 E-value=0.0083 Score=56.96 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=21.8
Q ss_pred ceecCCCCCcchHHHHHHHHHcCCc
Q 002337 687 VLLYGPPGTGKTLLAKAVATECSLN 711 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~~~ 711 (934)
++|.|+||+||||+++.+++.++..
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHc
Confidence 5788999999999999999987543
No 226
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.45 E-value=0.016 Score=57.61 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=28.3
Q ss_pred HhhcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 676 LFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 676 ~~~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++..|+.++.-++++||||+|||+++..+|...
T Consensus 29 ~lgGGip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 29 LLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp HTTSSBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred hhcCCCcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 445688888999999999999999999998653
No 227
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.31 E-value=0.021 Score=52.34 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=20.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHh
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el 421 (934)
|+|.|+||||||||++.+++.-
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 8999999999999999998663
No 228
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.30 E-value=0.03 Score=53.65 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=23.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
=|.++|++|+||||+++.+ .+.|.+++.
T Consensus 5 IIgitG~~gSGKstva~~l-~~~g~~~~~ 32 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALL-RSWGYPVLD 32 (191)
T ss_dssp EEEEEECTTSCHHHHHHHH-HHTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCCeEEE
Confidence 4789999999999999999 567877653
No 229
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=93.23 E-value=0.014 Score=56.83 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=29.5
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
+..+...++|||||+||||+++.++++.++..+++.
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vis~ 84 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISF 84 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEECCC
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhCCEEEec
Confidence 445568899999999999999999999887655443
No 230
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=93.19 E-value=0.096 Score=48.06 Aligned_cols=22 Identities=36% Similarity=0.572 Sum_probs=19.6
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|+||+|||+|..++.+.
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5889999999999999999743
No 231
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.15 E-value=0.05 Score=50.72 Aligned_cols=30 Identities=23% Similarity=0.191 Sum_probs=23.4
Q ss_pred ceecCCCCCcchHHHHHHHHHc---CCcEEEec
Q 002337 687 VLLYGPPGTGKTLLAKAVATEC---SLNFLSVK 716 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~---~~~~i~v~ 716 (934)
+-+.|++|+|||||+..++.++ |..+..++
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 3589999999999999998765 45555554
No 232
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.15 E-value=0.026 Score=56.00 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=24.8
Q ss_pred cCCCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 393 SLKFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 393 ~~~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
++..+.-++++||||||||+++..+|...
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 35677789999999999999999998753
No 233
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.14 E-value=0.027 Score=53.81 Aligned_cols=26 Identities=23% Similarity=0.433 Sum_probs=22.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg 422 (934)
++.|+|.||+|+||+||++.+.++..
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHhCC
Confidence 45699999999999999999998753
No 234
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=93.05 E-value=0.074 Score=52.72 Aligned_cols=66 Identities=21% Similarity=0.253 Sum_probs=39.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh-----C----CcEEEEecC----------ccccccc---cchHHHHHHHHHHhhcCC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL-----G----IHVVEYSCH----------NLMASSE---RKTSAALAQAFNTAQSYS 456 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el-----g----~~~~~I~~~----------~L~~~~~---g~~e~~L~~~f~~A~~~~ 456 (934)
-++|+|||..||||++|.++-.. | +....+... +-..... ..-...+..++..+. .
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~~--~ 114 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEAT--E 114 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHCC--T
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHhHHHHHHHhccCC--C
Confidence 48999999999999999887653 3 222233222 2111111 112245566666553 4
Q ss_pred CEEEEEcchh
Q 002337 457 PTILLLRDFD 466 (934)
Q Consensus 457 P~IL~IDEID 466 (934)
.++++|||+-
T Consensus 115 ~sLvliDE~~ 124 (224)
T d1ewqa2 115 NSLVLLDEVG 124 (224)
T ss_dssp TEEEEEESTT
T ss_pred CcEEeecccc
Confidence 5899999976
No 235
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=92.99 E-value=0.1 Score=52.66 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhccCCCccccCCCCceEEEECCCCCcHHHHHHHHHHH
Q 002337 374 DTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 374 ~~~~~L~~il~p~l~p~~~~~~~~~~VLL~GppGtGKTtLaralA~e 420 (934)
.+...+.+++..+... ......|+|.|.+|+||||++.++.++
T Consensus 13 ~~~~~l~e~~~~l~~~----~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 13 ATQTKLLELLGNLKQE----DVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHHHHT----TCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhhc----CCCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 3445555554433221 123356999999999999999999875
No 236
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.92 E-value=0.017 Score=57.58 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=28.1
Q ss_pred HhhcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 676 LFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 676 ~~~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
++..|+.++.-++++||||+|||+++-.+|...
T Consensus 28 ll~GGlp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 28 LLGGGIETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp HHTSSEESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred hhcCCccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 445678889999999999999999999887654
No 237
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.91 E-value=0.022 Score=56.64 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=24.3
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
+..+.-++++||||+|||+++-.+|...
T Consensus 33 lp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 5667789999999999999999888764
No 238
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.90 E-value=0.12 Score=52.01 Aligned_cols=28 Identities=29% Similarity=0.414 Sum_probs=23.2
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHH
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~ 707 (934)
|+.++.-.+|+|+||+|||+++-.+|..
T Consensus 25 G~~pg~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 25 NMVAGTVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp TEETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 5556677789999999999999888764
No 239
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.85 E-value=0.011 Score=56.42 Aligned_cols=25 Identities=24% Similarity=0.210 Sum_probs=21.2
Q ss_pred cceecCCCCCcchHHHHHHHHHcCC
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
-|.+.||+|+||||+|+.++..++.
T Consensus 24 iIgI~G~~GSGKSTla~~L~~~l~~ 48 (198)
T d1rz3a_ 24 VLGIDGLSRSGKTTLANQLSQTLRE 48 (198)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhcc
Confidence 3568999999999999999887643
No 240
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=92.81 E-value=0.04 Score=54.35 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=24.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHhC--CcEEEEe
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLG--IHVVEYS 429 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg--~~~~~I~ 429 (934)
|++.|++|+|||||++.+.+.++ ...+.|+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~ivn 34 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVN 34 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEEe
Confidence 78999999999999999987763 3455554
No 241
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=92.80 E-value=0.073 Score=55.32 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhC-----CcEEEEecCcc
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLG-----IHVVEYSCHNL 433 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg-----~~~~~I~~~~L 433 (934)
+.|.-|.+.|++|+||||+++.++..+. ..+..|+..++
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 4556789999999999999999999884 45556655543
No 242
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=92.60 E-value=0.039 Score=52.63 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=26.1
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
-.+.+|||.|++|+||||++-.+... |..++.
T Consensus 12 ~~g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 12 IYGLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp ETTEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred ECCEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 35678999999999999999888875 765543
No 243
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=92.54 E-value=0.15 Score=47.84 Aligned_cols=22 Identities=27% Similarity=0.359 Sum_probs=19.9
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|.|.|.+|+|||++.+++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999999764
No 244
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.44 E-value=0.037 Score=55.97 Aligned_cols=21 Identities=29% Similarity=0.485 Sum_probs=19.0
Q ss_pred EEECCCCCcHHHHHHHHHHHh
Q 002337 401 LLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 401 LL~GppGtGKTtLaralA~el 421 (934)
+|+|++|+||||++.+++-.+
T Consensus 27 ~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 27 LIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEECCTTSSHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHh
Confidence 799999999999999998644
No 245
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.30 E-value=0.11 Score=51.33 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=23.7
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecC
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKG 717 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~ 717 (934)
.++.+++.+|+|+|||+++-..+-.. +...+.+-.
T Consensus 57 ~g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~P 94 (237)
T d1gkub1 57 RKESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFP 94 (237)
T ss_dssp TTCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEES
T ss_pred CCCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEec
Confidence 36789999999999998765544322 444555443
No 246
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.19 E-value=0.035 Score=50.67 Aligned_cols=21 Identities=29% Similarity=0.544 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|+||+|||||+..+.+.
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999998874
No 247
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=92.19 E-value=0.036 Score=53.83 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=27.0
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
+....++|+|||+||||+++.++++-++-.++
T Consensus 51 PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vi 82 (205)
T d1tuea_ 51 PKKNCLVFCGPANTGKSYFGMSFIHFIQGAVI 82 (205)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHHTCEEC
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHhCCEEE
Confidence 44567999999999999999999999975443
No 248
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=92.15 E-value=0.043 Score=53.56 Aligned_cols=27 Identities=48% Similarity=0.656 Sum_probs=22.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
|.|+|++|+||||+++.+. ++|..++.
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vid 32 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVID 32 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEE
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEE
Confidence 7899999999999999886 77876553
No 249
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=92.14 E-value=0.016 Score=56.69 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=27.0
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcC
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
..++++.-+.|.||+|+||||+.++++....
T Consensus 22 ~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 22 MTIEKGNVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp EEEETTCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcccc
Confidence 4667788899999999999999999998653
No 250
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.13 E-value=0.037 Score=53.62 Aligned_cols=23 Identities=30% Similarity=0.310 Sum_probs=20.8
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
++|+|.|++|+|||||++.+.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999874
No 251
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=92.03 E-value=0.12 Score=50.99 Aligned_cols=21 Identities=33% Similarity=0.456 Sum_probs=18.8
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
-+++.||+..|||++.|.++-
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l 57 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTAL 57 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHH
Confidence 578999999999999998864
No 252
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=92.02 E-value=0.037 Score=50.88 Aligned_cols=22 Identities=32% Similarity=0.552 Sum_probs=20.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|+|.+|||||||++.+.+.
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999765
No 253
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.01 E-value=0.16 Score=48.62 Aligned_cols=23 Identities=30% Similarity=0.619 Sum_probs=20.7
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
..|+|.|+||+|||+|..++.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999999765
No 254
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=92.00 E-value=0.036 Score=51.92 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+++|.+|+|||||+..+.+.
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4999999999999999998764
No 255
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=91.87 E-value=0.035 Score=54.07 Aligned_cols=27 Identities=37% Similarity=0.562 Sum_probs=23.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
|.|+|+.||||||+++.+. ++|.+++.
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vid 31 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVD 31 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEE
Confidence 7799999999999999886 57887664
No 256
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=91.81 E-value=0.073 Score=55.85 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=26.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh---CCc--EEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL---GIH--VVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el---g~~--~~~I~~~ 431 (934)
.-|.+.||||+|||||+..++..+ |.. ++.++.+
T Consensus 55 ~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDps 93 (327)
T d2p67a1 55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPS 93 (327)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred eEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCc
Confidence 459999999999999999998876 433 4445544
No 257
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=91.75 E-value=0.054 Score=50.23 Aligned_cols=23 Identities=30% Similarity=0.404 Sum_probs=20.1
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|++|+|||+|.+.+.+.
T Consensus 3 ~ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 3 LRLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHcCC
Confidence 36899999999999999998654
No 258
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.62 E-value=0.041 Score=52.34 Aligned_cols=25 Identities=24% Similarity=0.465 Sum_probs=22.1
Q ss_pred CcceecCCCCCcchHHHHHHHHHcC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
.-|+|.||+|+|||++++.+..+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4578999999999999999998864
No 259
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=91.53 E-value=0.053 Score=52.96 Aligned_cols=25 Identities=12% Similarity=0.308 Sum_probs=22.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg 422 (934)
.-++|.||+|+|||||.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3489999999999999999999864
No 260
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.46 E-value=0.072 Score=54.71 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=27.1
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh------CCcEEEEecCcc
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL------GIHVVEYSCHNL 433 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el------g~~~~~I~~~~L 433 (934)
|.=|.|.|++||||||+++.+...+ +..+..++..++
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 4457899999999999999887765 234555655444
No 261
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=91.42 E-value=0.058 Score=51.05 Aligned_cols=31 Identities=32% Similarity=0.517 Sum_probs=25.2
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
-.+.+||+.|++|+||||++-.+... |..++
T Consensus 13 ~~g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 13 VYGVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp ETTEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred ECCEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 35679999999999999999887776 66544
No 262
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=91.31 E-value=0.05 Score=51.86 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=25.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhCCcEEE
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLGIHVVE 427 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg~~~~~ 427 (934)
.+.+|||.|++|+||||++-.+... |..++.
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~~-G~~lva 44 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLINK-NHLFVG 44 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHTT-TCEEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc-CCceec
Confidence 5678999999999999999888765 665543
No 263
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=91.29 E-value=0.044 Score=54.44 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=25.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEEEecC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~I~~~ 431 (934)
|.|+|+.||||||+++.++...|. ..+++.
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g~--~~i~~a 33 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYSA--VKYQLA 33 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSCE--EECCTT
T ss_pred EEEECCCCCCHHHHHHHHHHhCCC--eEEccc
Confidence 789999999999999999998764 455544
No 264
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.22 E-value=0.028 Score=56.17 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=31.7
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
+.+.++.-+.|.||+||||||+.++++...... -+.+++.++
T Consensus 21 l~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i 64 (232)
T d2awna2 21 LDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRM 64 (232)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCC
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEC
Confidence 456778889999999999999999999876433 344555443
No 265
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.19 E-value=0.048 Score=53.55 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=24.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 394 LKFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 394 ~~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
+..+.-++|.|+||+|||+++..+|...
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3556669999999999999999998876
No 266
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.08 E-value=0.11 Score=50.83 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=25.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
|.+.|+.|+||||+++.+++.+ |.++..+..+
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~p 40 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 40 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 6777999999999999999987 5666665433
No 267
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.07 E-value=0.035 Score=54.60 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.6
Q ss_pred hhcCCCCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 677 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 677 ~~~~~~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+..|+.++.-++++|+||+|||+++..+|...
T Consensus 27 l~GGl~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 27 LGGGLESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTSSEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred cCCCccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34568888899999999999999999998765
No 268
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.04 E-value=0.038 Score=51.71 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=20.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
.-|+|+|++|+|||||+..+.+.
T Consensus 14 ~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 14 GKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEEETTSSHHHHHHHHSCC
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 34999999999999999998653
No 269
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=91.00 E-value=0.16 Score=53.05 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=25.8
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh---CCc--EEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL---GIH--VVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el---g~~--~~~I~~~ 431 (934)
.-|.+.||||+|||||+..++..+ |.. ++.++.+
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDps 90 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPS 90 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccc
Confidence 349999999999999999999764 444 3444444
No 270
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.93 E-value=0.058 Score=51.90 Aligned_cols=22 Identities=14% Similarity=0.456 Sum_probs=20.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|+|+||+|||||+.++.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5999999999999999999876
No 271
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=90.89 E-value=0.19 Score=46.63 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=21.2
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
...|++.|.||+|||+|...+...
T Consensus 15 ~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 15 EHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTT
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 457999999999999999998764
No 272
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.87 E-value=0.1 Score=50.21 Aligned_cols=32 Identities=28% Similarity=0.525 Sum_probs=26.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
|.+.|+.|+||||+++.+++.+ |..+..+..+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 7889999999999999999987 5666666544
No 273
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=90.87 E-value=0.24 Score=45.61 Aligned_cols=22 Identities=27% Similarity=0.371 Sum_probs=19.5
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|+|.|++|+|||+|...+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5889999999999999988653
No 274
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.80 E-value=0.043 Score=50.97 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|++.|++|+|||||++.+.+.
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 4899999999999999998764
No 275
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.74 E-value=0.047 Score=53.17 Aligned_cols=26 Identities=15% Similarity=0.175 Sum_probs=22.6
Q ss_pred cceecCCCCCcchHHHHHHHHHcCCc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATECSLN 711 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~~~~ 711 (934)
-|-+.||+|+||||+|+.++..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh
Confidence 35689999999999999999988654
No 276
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=90.72 E-value=0.046 Score=52.38 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=24.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCcE
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLGIHV 425 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg~~~ 425 (934)
|.-|.+-|+-|+||||+++.+++.++...
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~~~ 37 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDIC 37 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTTEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCcE
Confidence 34589999999999999999999986543
No 277
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=90.56 E-value=0.13 Score=46.86 Aligned_cols=24 Identities=25% Similarity=0.410 Sum_probs=20.8
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
.-.|+|.|.||+|||+|.+++...
T Consensus 5 e~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 5 EMRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHhCC
Confidence 346899999999999999998764
No 278
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.55 E-value=0.1 Score=50.60 Aligned_cols=33 Identities=33% Similarity=0.254 Sum_probs=26.6
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEecC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~ 717 (934)
.+.++.+|+|+|||.++-+++.+.+.+.+.+-.
T Consensus 86 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp SEEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCcEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 345778899999999999999888877666554
No 279
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.54 E-value=0.06 Score=53.86 Aligned_cols=36 Identities=22% Similarity=0.483 Sum_probs=27.6
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
.-+.|.||+|+||||+.++++...... -+.+++.++
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i 62 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADI 62 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEEC
T ss_pred EEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEEC
Confidence 345689999999999999999877543 455666555
No 280
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=90.51 E-value=0.032 Score=56.01 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=30.7
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCcc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPE 719 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~ 719 (934)
+.+.++.-+.|.||+|+||||++++++...... -+.+++.+
T Consensus 24 l~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~ 66 (240)
T d1g2912 24 LEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKL 66 (240)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEE
T ss_pred eEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEE
Confidence 356678889999999999999999999866432 24444433
No 281
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.50 E-value=0.047 Score=51.48 Aligned_cols=22 Identities=18% Similarity=0.462 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|+|+|+||+|||||+.++.++
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999999764
No 282
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.26 E-value=0.07 Score=50.03 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+++|++|||||+|++.+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 899999999999999988754
No 283
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.24 E-value=0.6 Score=44.47 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=16.0
Q ss_pred CceEEEECCCCCcHHHHHH
Q 002337 397 RVAVLLHGLPGCGKRTVVR 415 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLar 415 (934)
+.++++.+|+|+|||+++-
T Consensus 40 ~~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 40 GKNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp CSCEEEECSSHHHHHHHHH
T ss_pred CCCEEEEcCCCCchhHHHH
Confidence 4568999999999998763
No 284
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.23 E-value=0.33 Score=44.88 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|.+.|+||+|||+|.+++.+
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999974
No 285
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.13 E-value=0.2 Score=48.13 Aligned_cols=23 Identities=39% Similarity=0.427 Sum_probs=20.3
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
+.|++.|+||+|||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 46899999999999999999753
No 286
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.12 E-value=0.22 Score=46.29 Aligned_cols=23 Identities=39% Similarity=0.531 Sum_probs=20.2
Q ss_pred CCcceecCCCCCcchHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~ 706 (934)
.-.|++.|++|+|||+|...+..
T Consensus 16 ~~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 16 EVRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp CEEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEEECCCCCCHHHHHHHHhc
Confidence 45799999999999999998854
No 287
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.09 E-value=0.051 Score=54.40 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=32.5
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
+.+.++.-+.|.||+||||||+.++++...... -+.+++.++
T Consensus 27 l~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i 70 (239)
T d1v43a3 27 LTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDV 70 (239)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEEC
T ss_pred EEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceec
Confidence 356677889999999999999999999876443 355666554
No 288
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.95 E-value=0.077 Score=49.19 Aligned_cols=21 Identities=14% Similarity=0.365 Sum_probs=19.0
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~ 419 (934)
-|+|.|++|+|||+|++.+.+
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 389999999999999998875
No 289
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.89 E-value=0.074 Score=50.60 Aligned_cols=29 Identities=21% Similarity=0.414 Sum_probs=24.2
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEE
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFL 713 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i 713 (934)
+.|+|.||+|+||+++++.+.++....|.
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~~ 32 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRFA 32 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTEE
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcCee
Confidence 56899999999999999999987654443
No 290
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.89 E-value=0.069 Score=54.82 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHh
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el 421 (934)
.+|+|++|+|||++++||+--+
T Consensus 26 ~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5789999999999999996543
No 291
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=89.79 E-value=0.08 Score=49.39 Aligned_cols=37 Identities=32% Similarity=0.372 Sum_probs=28.7
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCcc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 719 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~ 719 (934)
+++.-|+|.|+=|+|||+++|.+++.++..- .|+.|.
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~~-~V~SPT 67 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQG-NVKSPT 67 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCCS-CCCCCT
T ss_pred CCCeEEEEecCCCccHHHHHHHHHhhccccc-ccCCCc
Confidence 4455688999999999999999999997652 344443
No 292
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=89.68 E-value=0.027 Score=53.32 Aligned_cols=23 Identities=30% Similarity=0.302 Sum_probs=20.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHhC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg 422 (934)
.+|+||+|+||||++.||.--++
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 58899999999999999997774
No 293
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.61 E-value=0.085 Score=49.22 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||+|++.+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999998764
No 294
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=89.60 E-value=0.086 Score=48.88 Aligned_cols=22 Identities=36% Similarity=0.427 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|++.|++|+|||+|++.+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3899999999999999988764
No 295
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=89.59 E-value=0.11 Score=52.88 Aligned_cols=59 Identities=29% Similarity=0.449 Sum_probs=39.9
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcCCcEEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEecccc
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 753 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfiDEid 753 (934)
+......+.|+||++||||+++.+++..++. ...++.+. . -|..+....-.++++||..
T Consensus 100 ~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg~-~~~~~~~~----------~----~f~l~~l~~k~~~~~~e~~ 158 (267)
T d1u0ja_ 100 KFGKRNTIWLFGPATTGKTNIAEAIAHTVPF-YGCVNWTN----------E----NFPFNDCVDKMVIWWEEGK 158 (267)
T ss_dssp CSTTCCEEEEECSTTSSHHHHHHHHHHHSSC-EEECCTTC----------S----SCTTGGGSSCSEEEECSCC
T ss_pred CCCccEEEEEEcCCCCCHHHHHHHHHHHhcc-hhhccccC----------C----CccccccCCCEEEEEeCCC
Confidence 4455678899999999999999999998854 33333211 1 1233344444689999975
No 296
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.56 E-value=0.062 Score=53.20 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=23.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+|.|++|+|||||+.++..........|+-
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs~ 128 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEVSE 128 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC------
T ss_pred CeEEEECCCCCCHHHHHHhhcchhhhhccCccc
Confidence 347999999999999999998877666666543
No 297
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=89.54 E-value=0.036 Score=55.60 Aligned_cols=43 Identities=26% Similarity=0.228 Sum_probs=32.4
Q ss_pred hcCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 678 SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 678 ~~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
++.+..+.-+.|.||+||||||++++++...... -+.+++.++
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i 69 (240)
T d3dhwc1 25 SLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQEL 69 (240)
T ss_dssp EEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEE
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEe
Confidence 3456778889999999999999999999866443 345555444
No 298
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.49 E-value=0.089 Score=48.84 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|+|.+|+|||+|++.+.+.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999998864
No 299
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=89.33 E-value=0.098 Score=49.91 Aligned_cols=21 Identities=19% Similarity=0.387 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~ 419 (934)
.|+|.|+||+|||||++++.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 499999999999999999975
No 300
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=89.31 E-value=0.1 Score=50.59 Aligned_cols=23 Identities=35% Similarity=0.583 Sum_probs=21.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el 421 (934)
=|.+-|+.|+||||+++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 38899999999999999999887
No 301
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=89.30 E-value=0.084 Score=50.20 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=26.1
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
+.++||.|++|+|||++|-.+... |..++.=+
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD 45 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIADD 45 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEecC
Confidence 679999999999999999888764 66665433
No 302
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=89.29 E-value=0.087 Score=54.31 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=17.2
Q ss_pred eEEEECCCCCcHHHH-HHHHHHHh
Q 002337 399 AVLLHGLPGCGKRTV-VRYVARRL 421 (934)
Q Consensus 399 ~VLL~GppGtGKTtL-aralA~el 421 (934)
++++.|+|||||||+ +..+|..+
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHHHHHH
Confidence 489999999999985 44455443
No 303
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.19 E-value=0.096 Score=48.63 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+.+.
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998764
No 304
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=88.99 E-value=0.071 Score=55.24 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=20.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHhC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg 422 (934)
-+|+||+|||||+++.||+--+|
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 38999999999999999987664
No 305
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.95 E-value=0.093 Score=49.00 Aligned_cols=21 Identities=33% Similarity=0.566 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+++.
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999863
No 306
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.94 E-value=0.1 Score=48.60 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|++|+|||+|++.+...
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999998864
No 307
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.91 E-value=0.19 Score=48.95 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=28.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~ 431 (934)
+=|.+-|+-||||||+++.+++.+..+...+..+
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~p 37 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFP 37 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEESS
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhCCEEEEEC
Confidence 3489999999999999999999998776655543
No 308
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.88 E-value=0.1 Score=48.90 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||||++.+.+.
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988663
No 309
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.87 E-value=0.099 Score=49.48 Aligned_cols=20 Identities=30% Similarity=0.366 Sum_probs=18.6
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~ 419 (934)
|++.|++|+|||+|++.+.+
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 89999999999999998875
No 310
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.86 E-value=0.096 Score=48.88 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|.+|||||+|++.+...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3999999999999999988763
No 311
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=88.76 E-value=0.033 Score=55.86 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=26.9
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcC
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
..+.++.-+.+.||+||||||+.++++....
T Consensus 26 l~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 26 INIENGERFGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp EEECTTCEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHHcCcC
Confidence 4567788999999999999999999998653
No 312
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.74 E-value=0.11 Score=48.54 Aligned_cols=21 Identities=24% Similarity=0.461 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||+|++.+.+.
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999998753
No 313
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=88.65 E-value=0.05 Score=55.15 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=31.6
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
+.+.++.-+-|.||+|+||||++++++...... -+.+++.++
T Consensus 23 ~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i 66 (258)
T d1b0ua_ 23 LQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNI 66 (258)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred eEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEe
Confidence 456778899999999999999999999765432 244555444
No 314
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.62 E-value=0.11 Score=48.17 Aligned_cols=21 Identities=29% Similarity=0.317 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|||||+|++.+.+.
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988763
No 315
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.54 E-value=0.097 Score=48.74 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|.+|+|||+|++.+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999988753
No 316
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=88.53 E-value=0.11 Score=52.89 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=16.0
Q ss_pred eEEEECCCCCcHHHH-HHHHHH
Q 002337 399 AVLLHGLPGCGKRTV-VRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtL-aralA~ 419 (934)
++|+.|+||||||++ +..++.
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ 37 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAH 37 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHH
T ss_pred CEEEEeeCCccHHHHHHHHHHH
Confidence 489999999999985 444443
No 317
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.51 E-value=0.1 Score=48.38 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||+|+..+.+.
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999998864
No 318
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.48 E-value=0.12 Score=47.78 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+...
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 319
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=88.47 E-value=0.67 Score=43.27 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~ 419 (934)
+|.++|.|++|||||++++.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 699999999999999999975
No 320
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.42 E-value=0.071 Score=53.88 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=32.8
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHHcCCc--EEEecCccc
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN--FLSVKGPEL 720 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~~~~~--~i~v~~~~l 720 (934)
+.+.++.-+-|.||+|+||||++++++...... -+.+++.++
T Consensus 25 ~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i 68 (254)
T d1g6ha_ 25 ISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI 68 (254)
T ss_dssp CEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEec
Confidence 356678889999999999999999999876543 455566554
No 321
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.39 E-value=0.12 Score=48.90 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|.+|||||+|++.+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988763
No 322
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=88.35 E-value=0.11 Score=49.49 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.4
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
.-|-+.|++|+|||++|+.+. +.|.++++.
T Consensus 4 ~IIgitG~~gSGKstva~~l~-~~g~~~~~~ 33 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALLR-SWGYPVLDL 33 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHHH-HTTCCEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHH-HCCCeEEEc
Confidence 345689999999999999994 678877754
No 323
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.31 E-value=0.12 Score=48.16 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+++|.+|+|||+|++.+...
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999998854
No 324
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.23 E-value=0.11 Score=48.11 Aligned_cols=21 Identities=29% Similarity=0.441 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|.+|+|||+|++.+...
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998764
No 325
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=88.04 E-value=0.25 Score=50.10 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=37.7
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHhCCcEEEEecCccccccccchHHHHHHHHHHhhcCCCEEEEEcchh
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~elg~~~~~I~~~~L~~~~~g~~e~~L~~~f~~A~~~~P~IL~IDEID 466 (934)
....+.|+||+++|||+++.++++.+|. ...++... .-|..+.-..-.++++||.+
T Consensus 103 k~n~~~l~G~~~tGKS~f~~~i~~~lg~-~~~~~~~~--------------~~f~l~~l~~k~~~~~~e~~ 158 (267)
T d1u0ja_ 103 KRNTIWLFGPATTGKTNIAEAIAHTVPF-YGCVNWTN--------------ENFPFNDCVDKMVIWWEEGK 158 (267)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHSSC-EEECCTTC--------------SSCTTGGGSSCSEEEECSCC
T ss_pred ccEEEEEEcCCCCCHHHHHHHHHHHhcc-hhhccccC--------------CCccccccCCCEEEEEeCCC
Confidence 3456999999999999999999999965 33332211 01223333345688888865
No 326
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=87.99 E-value=0.18 Score=51.53 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=25.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecCcc
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCHNL 433 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~~L 433 (934)
=|.+.|++|+||||++++++..+ +.....+.+.+.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 38999999999999999998876 556666665543
No 327
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=87.99 E-value=0.1 Score=48.64 Aligned_cols=23 Identities=39% Similarity=0.637 Sum_probs=20.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
..|++.|++|+|||||++.+.+.
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 45999999999999999988653
No 328
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.90 E-value=0.12 Score=47.93 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|++|+|||+|++.+...
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998764
No 329
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.86 E-value=0.13 Score=47.61 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+...
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998763
No 330
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.67 E-value=0.13 Score=47.54 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|.+|+|||+|++.+.+.
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998753
No 331
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.64 E-value=0.13 Score=48.18 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|.+|+|||+|++.+...
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4999999999999999988764
No 332
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=87.59 E-value=0.07 Score=53.15 Aligned_cols=29 Identities=31% Similarity=0.420 Sum_probs=25.6
Q ss_pred cCCCCCCcceecCCCCCcchHHHHHHHHH
Q 002337 679 SGLRKRSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 679 ~~~~~~~~iLl~GppGtGKT~lakalA~~ 707 (934)
+.++++.-+.|.||+|+||||+.++++..
T Consensus 20 l~I~~Gei~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 20 GEVRAGEILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp EEEETTCEEECBCCTTSSHHHHHHHHHTS
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhCC
Confidence 45677889999999999999999999874
No 333
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=87.55 E-value=0.14 Score=51.57 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=21.6
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el 421 (934)
+.-.+|+|++|+|||+++-.+|..+
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 5558999999999999999888764
No 334
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.52 E-value=0.14 Score=48.02 Aligned_cols=22 Identities=23% Similarity=0.439 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|++.|.+|+|||+|++.+.+.
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3999999999999999998763
No 335
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.44 E-value=0.19 Score=49.40 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=24.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEE
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVV 426 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~ 426 (934)
+=|.+-|+-||||||+++.++..++...+
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 34899999999999999999999865443
No 336
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.28 E-value=0.14 Score=47.87 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988753
No 337
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.26 E-value=0.13 Score=47.88 Aligned_cols=21 Identities=43% Similarity=0.680 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 899999999999999988653
No 338
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.23 E-value=0.086 Score=54.04 Aligned_cols=23 Identities=22% Similarity=0.453 Sum_probs=20.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHhC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg 422 (934)
-+|+||+|+|||++++|++--+|
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 48999999999999999976554
No 339
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.19 E-value=0.35 Score=44.88 Aligned_cols=22 Identities=36% Similarity=0.533 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+++..+...
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999888653
No 340
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.04 E-value=0.16 Score=47.43 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||+|+..+...
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999888763
No 341
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.97 E-value=0.13 Score=47.91 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||||++++.+.
T Consensus 8 I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999754
No 342
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=86.94 E-value=0.11 Score=49.29 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=25.6
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
+.++||.||+|+|||++|-.+... |..+++=+
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lvaDD 46 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVGDD 46 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceecCC
Confidence 679999999999999999888754 66655433
No 343
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=86.90 E-value=0.16 Score=47.23 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998753
No 344
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.87 E-value=0.16 Score=47.00 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+++|.+|+|||+|++.+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3899999999999999998764
No 345
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.86 E-value=0.12 Score=46.73 Aligned_cols=22 Identities=27% Similarity=0.449 Sum_probs=19.8
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|+|.|+||+|||+|+..+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998764
No 346
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.80 E-value=0.16 Score=47.11 Aligned_cols=21 Identities=29% Similarity=0.400 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||+|++.+...
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 999999999999999988663
No 347
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.80 E-value=0.15 Score=47.86 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=20.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
.-|++.|.+|+|||+|++.+...
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 34899999999999999988764
No 348
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=86.73 E-value=0.13 Score=48.44 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=24.4
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEE
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLS 714 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~ 714 (934)
+.++||.|++|.|||++|-.+... |..++.
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li~ 44 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLVA 44 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 679999999999999999887765 555543
No 349
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.59 E-value=0.15 Score=46.66 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=19.8
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|.|.|.||+|||+|..++.++
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999999765
No 350
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=86.54 E-value=0.12 Score=48.63 Aligned_cols=21 Identities=38% Similarity=0.572 Sum_probs=18.9
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~ 419 (934)
.|.|+|+||+|||||++++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 389999999999999999854
No 351
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=86.54 E-value=0.055 Score=53.81 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=19.7
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
+..+|.|++|+|||||+.++..+.......|+.
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs~ 130 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGLRTNEISE 130 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC-----------
T ss_pred ceEEEECCCCccHHHHHHhhccHhHhhhccccc
Confidence 346788999999999999999887666666654
No 352
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=86.48 E-value=0.19 Score=48.86 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=21.9
Q ss_pred CcceecCCCCCcchHHHHHHHHHcC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~ 709 (934)
.-++|.||+|+|||++.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4478899999999999999998865
No 353
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.37 E-value=0.063 Score=49.31 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=20.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el 421 (934)
.|.|.|.||+|||||++++.++-
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 38999999999999999998763
No 354
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=86.22 E-value=0.36 Score=50.27 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=25.3
Q ss_pred CCcceecCCCCCcchHHHHHHHHHc---C--CcEEEecC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATEC---S--LNFLSVKG 717 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~---~--~~~i~v~~ 717 (934)
...|-+.||||+|||+|..+++..+ + ..++.++.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDp 92 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDP 92 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCC
Confidence 3467899999999999999997654 2 33555553
No 355
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.17 E-value=0.19 Score=46.67 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=19.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|++.|.+|+|||+|++.+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999987764
No 356
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.10 E-value=0.1 Score=48.80 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=20.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
..|+++|++|+|||+|++.+...
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 45999999999999999998754
No 357
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.98 E-value=0.2 Score=46.66 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|.+|||||+|++.+++.
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999998864
No 358
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=85.98 E-value=0.35 Score=44.88 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=20.7
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
.-.|++.|+||+|||++.+.+...
T Consensus 12 ~~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 12 EMRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp CEEEEEEEETTSSHHHHHHHTTCC
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 356999999999999999998643
No 359
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=85.93 E-value=0.15 Score=47.88 Aligned_cols=24 Identities=29% Similarity=0.499 Sum_probs=20.2
Q ss_pred CCceEEEECCCCCcHHHHHHHHHH
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~ 419 (934)
....|++.|++|+|||||++.+..
T Consensus 16 k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 16 KELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTCC
T ss_pred ceEEEEEECCCCCCHHHHHHHHhc
Confidence 344699999999999999998753
No 360
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.85 E-value=0.19 Score=46.92 Aligned_cols=20 Identities=40% Similarity=0.539 Sum_probs=18.7
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~ 419 (934)
|+|.|.+|+|||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999998875
No 361
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=85.81 E-value=0.16 Score=49.01 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=24.2
Q ss_pred ceecCCCCCcchHHHHHHHHHcCCcEEEec
Q 002337 687 VLLYGPPGTGKTLLAKAVATECSLNFLSVK 716 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~~~~i~v~ 716 (934)
|-+.|++|+||||+++.+. +.|.+++..+
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vidaD 33 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDAD 33 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEEch
Confidence 4579999999999999886 5788887644
No 362
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.65 E-value=0.18 Score=48.04 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|++.|++|+|||||++.+...
T Consensus 9 ivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhhC
Confidence 899999999999999988754
No 363
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.62 E-value=0.11 Score=50.91 Aligned_cols=25 Identities=20% Similarity=0.210 Sum_probs=22.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~ 423 (934)
-|.+-|+-||||||+++.+++.+..
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhc
Confidence 4899999999999999999999854
No 364
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.55 E-value=0.13 Score=48.18 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=8.7
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~ 419 (934)
|++.|.+|||||+|++.+.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999987775
No 365
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=85.51 E-value=0.21 Score=46.84 Aligned_cols=23 Identities=26% Similarity=0.509 Sum_probs=20.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
..|.+.|.+|+|||||+.++.+.
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
Confidence 45999999999999999999864
No 366
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.30 E-value=0.19 Score=47.31 Aligned_cols=23 Identities=22% Similarity=0.522 Sum_probs=20.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
.-|+|.|.+|+|||+|++.+...
T Consensus 3 ~KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 35899999999999999988764
No 367
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=85.16 E-value=0.15 Score=47.80 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|.|+|.||+|||||++++.+.
T Consensus 3 ~VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCSS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999999754
No 368
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=85.13 E-value=0.12 Score=49.11 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=25.6
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHcCCcEE
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATECSLNFL 713 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~~~~~i 713 (934)
+|.-|.+-|+.|+||||+++.+++.++...+
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 3456789999999999999999998865443
No 369
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.06 E-value=0.2 Score=47.09 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|++.|.+|+|||+|++.+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4999999999999999988764
No 370
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.05 E-value=0.26 Score=47.79 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=24.4
Q ss_pred cceecCCCCCcchHHHHHHHHHc---CCcEEEec
Q 002337 686 GVLLYGPPGTGKTLLAKAVATEC---SLNFLSVK 716 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~---~~~~i~v~ 716 (934)
=|.|.|+.|+||||+++.+++.+ +.+++.+.
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 35566999999999999998865 56666654
No 371
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=84.94 E-value=0.21 Score=48.39 Aligned_cols=28 Identities=36% Similarity=0.553 Sum_probs=23.3
Q ss_pred ceecCCCCCcchHHHHHHHHHcCCcEEEe
Q 002337 687 VLLYGPPGTGKTLLAKAVATECSLNFLSV 715 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~~~~i~v 715 (934)
|.+.|++|+|||++++.+. +.|+.++..
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vida 33 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVIDA 33 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEEH
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEEc
Confidence 4589999999999999886 678777653
No 372
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.83 E-value=0.33 Score=49.58 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=20.6
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+.|--|-+.|++|+||||++..+...+
T Consensus 25 ~~P~iIGi~G~qGSGKSTl~~~l~~~L 51 (286)
T d1odfa_ 25 KCPLFIFFSGPQGSGKSFTSIQIYNHL 51 (286)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEeECCCCCCHHHHHHHHHHHH
Confidence 334455688999999999999886543
No 373
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=84.81 E-value=0.18 Score=49.30 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=19.6
Q ss_pred ceecCCCCCcchHHHHHHHHHc
Q 002337 687 VLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~ 708 (934)
+++.||+|+||||+.+++.+..
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 6789999999999999998654
No 374
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.76 E-value=0.22 Score=47.07 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|.+|+|||+|++.+...
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 3899999999999999988764
No 375
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=84.62 E-value=0.12 Score=48.11 Aligned_cols=22 Identities=18% Similarity=0.400 Sum_probs=19.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~ 419 (934)
..|.|.|.|++|||||++++.+
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4599999999999999999854
No 376
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.34 E-value=0.13 Score=48.09 Aligned_cols=22 Identities=32% Similarity=0.371 Sum_probs=18.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|++.|++|+|||+|++.++..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999987654
No 377
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=84.30 E-value=0.15 Score=47.27 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=21.2
Q ss_pred CCCCcceecCCCCCcchHHHHHHHH
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~ 706 (934)
++...|+|.|++|+|||+|..++..
T Consensus 11 ~k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 11 KKTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhC
Confidence 3456799999999999999999854
No 378
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.19 E-value=0.24 Score=52.68 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=20.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~ 423 (934)
-+++||+|+|||+++.||+--+|.
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg~ 51 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLGV 51 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 479999999999999999876654
No 379
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.13 E-value=0.24 Score=47.03 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 002337 400 VLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~e 420 (934)
|+|.|.+|+|||+|++.+...
T Consensus 6 vvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999887754
No 380
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.05 E-value=0.32 Score=46.46 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=25.7
Q ss_pred ceecCCCCCcchHHHHHHHHHc---CCcEEEecCc
Q 002337 687 VLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGP 718 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~ 718 (934)
|.+-|+.|+||||+++.+++.+ |.+++.+..+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 5678999999999999999865 6677666544
No 381
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=83.85 E-value=2 Score=38.49 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=23.8
Q ss_pred EEEECCCCCcHHH-HHHHHHH--HhCCcEEEEecC
Q 002337 400 VLLHGLPGCGKRT-VVRYVAR--RLGIHVVEYSCH 431 (934)
Q Consensus 400 VLL~GppGtGKTt-LaralA~--elg~~~~~I~~~ 431 (934)
-+++||-.+|||| |++.+-+ ..|.+++.++..
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~ 39 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 39 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEc
Confidence 3789999999999 7777633 347777766654
No 382
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.62 E-value=0.22 Score=46.46 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+++..+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 4889999999999999998753
No 383
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=83.49 E-value=0.29 Score=50.01 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=39.7
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHcCCc----EEEecCccccccccchhhhhhHHHHHHHHhCCCcEEEeccc
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN----FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 752 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~~~~----~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~~p~vlfiDEi 752 (934)
.+-++..+++.|++|+|||+++..++.....+ ++.+- .+|+....+.+..... .++++..-.
T Consensus 39 PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~~~~~v~~~~-------~iger~~ev~~~~~~~----~~~vv~~t~ 104 (289)
T d1xpua3 39 PIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVL-------LIDERPEEVTEMQRLV----KGEVVASTF 104 (289)
T ss_dssp CCBTTCEEEEEECSSSSHHHHHHHHHHHHHHHCTTSEEEEE-------EEEECHHHHHHHHHHC----SSEEEEEET
T ss_pred cccCCCeeeEeCCCCCCHHHHHHHHHHHHhhcCCCeEEEEE-------eeceeHHHHHhHHhhc----ceEEEeccC
Confidence 45668899999999999999999998755322 22211 2556656666655443 245554443
No 384
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=83.12 E-value=0.14 Score=47.92 Aligned_cols=23 Identities=30% Similarity=0.291 Sum_probs=20.2
Q ss_pred cceecCCCCCcchHHHHHHHHHc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~ 708 (934)
-.+|+||+|+|||++..||...+
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 45789999999999999998765
No 385
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=82.96 E-value=0.25 Score=50.03 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=14.8
Q ss_pred CCcceecCCCCCcchHHH
Q 002337 684 RSGVLLYGPPGTGKTLLA 701 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~la 701 (934)
...+++.|+||||||+++
T Consensus 14 ~~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 14 TGPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SSEEEECCCTTSCHHHHH
T ss_pred CCCEEEEeeCCccHHHHH
Confidence 345899999999999754
No 386
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=82.66 E-value=0.44 Score=51.05 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=27.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
++++++|++|+|||++++.+...+ |..++.++..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 579999999999999988766543 6677777654
No 387
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.25 E-value=0.25 Score=45.46 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|+||+|||+|+..+..
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 388
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=82.23 E-value=0.34 Score=49.09 Aligned_cols=19 Identities=37% Similarity=0.532 Sum_probs=16.4
Q ss_pred CCCCCcceecCCCCCcchH
Q 002337 681 LRKRSGVLLYGPPGTGKTL 699 (934)
Q Consensus 681 ~~~~~~iLl~GppGtGKT~ 699 (934)
+++++.+++.+|+|+|||+
T Consensus 6 ~~~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp SSTTCEEEECCCTTSSTTT
T ss_pred hhcCCcEEEEECCCCCHHH
Confidence 4567889999999999996
No 389
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=82.03 E-value=0.25 Score=48.63 Aligned_cols=25 Identities=24% Similarity=0.305 Sum_probs=21.9
Q ss_pred ceecCCCCCcchHHHHHHHHHcCCc
Q 002337 687 VLLYGPPGTGKTLLAKAVATECSLN 711 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~~~ 711 (934)
|.|.|+.||||||+|+.++...|+.
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g~~ 28 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYSAV 28 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSCEE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCe
Confidence 5689999999999999999887654
No 390
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.02 E-value=0.32 Score=45.97 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=18.2
Q ss_pred eEEEECCCCCcHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVA 418 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA 418 (934)
-|+|.|.+|+|||+|++.+.
T Consensus 4 KivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 38999999999999999983
No 391
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=81.91 E-value=0.25 Score=49.42 Aligned_cols=20 Identities=35% Similarity=0.596 Sum_probs=18.1
Q ss_pred eecCCCCCcchHHHHHHHHH
Q 002337 688 LLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 688 Ll~GppGtGKT~lakalA~~ 707 (934)
+|+||+|+|||++..|++..
T Consensus 27 ~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 27 LIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp EEECCTTSSHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHH
Confidence 79999999999999999753
No 392
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.89 E-value=0.75 Score=44.84 Aligned_cols=22 Identities=36% Similarity=0.611 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHh
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el 421 (934)
+++.|.-|+|||||++.+.+..
T Consensus 6 ~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEeeCCCCCHHHHHHHHHhcC
Confidence 6899999999999999988754
No 393
>d1cz5a1 b.52.2.3 (A:1-91) N-terminal domain of VAT-N, VAT-Nn {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=81.86 E-value=0.78 Score=38.28 Aligned_cols=36 Identities=11% Similarity=-0.085 Sum_probs=30.2
Q ss_pred cCceEEeCHhhHhhccCCcccchhheecCccceeEEEE
Q 002337 172 DRQVAYLSPLLAFNLDLHISSLKFLVHQGKEVLESLFI 209 (934)
Q Consensus 172 ~~~~~~lsp~~~~nL~~~~~~~~~~~~~g~~~~~~~~~ 209 (934)
-.++|+|+|..+..||+.+| |.+.++|+++..+.++
T Consensus 20 grgiari~~~~m~~Lgl~~G--D~V~I~Gkr~t~a~v~ 55 (91)
T d1cz5a1 20 GMSRVRLDESSRRLLDAEIG--DVVEIEKVRKTVGRVY 55 (91)
T ss_dssp CSSEEEECHHHHHTTSCCTT--CEEEEESSSEEEEEEE
T ss_pred CCcEEEECHHHHHHcCCCCC--CEEEEEcCceEEEEEE
Confidence 46899999999999999999 6789999987555553
No 394
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=81.83 E-value=0.27 Score=47.40 Aligned_cols=24 Identities=25% Similarity=0.335 Sum_probs=20.9
Q ss_pred CcceecCCCCCcchHHHHHHHHHc
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~ 708 (934)
+=|.|-|+.|+||||+++.+++.+
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 447788999999999999998866
No 395
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=81.73 E-value=0.81 Score=47.40 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=25.1
Q ss_pred CcceecCCCCCcchHHHHHHHHHc-----CCcEEEecC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATEC-----SLNFLSVKG 717 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~-----~~~~i~v~~ 717 (934)
..|-+.||||+|||++..+++..+ ..-++.++.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDp 89 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDP 89 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccc
Confidence 457799999999999999998653 334566654
No 396
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=81.48 E-value=0.24 Score=43.60 Aligned_cols=20 Identities=30% Similarity=0.375 Sum_probs=16.7
Q ss_pred CCCceEEEECCCCCcHHHHH
Q 002337 395 KFRVAVLLHGLPGCGKRTVV 414 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLa 414 (934)
+.+..++|++|+|+|||..+
T Consensus 5 ~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp STTCEEEECCCTTSSTTTTH
T ss_pred HcCCcEEEEcCCCCChhHHH
Confidence 45677999999999999655
No 397
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=81.43 E-value=0.41 Score=49.41 Aligned_cols=39 Identities=15% Similarity=0.109 Sum_probs=28.2
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHHcC-----CcEEEecCccc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATECS-----LNFLSVKGPEL 720 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~~~-----~~~i~v~~~~l 720 (934)
+.|--|.+.|++|+||||+|+.++..+. ..+..+...++
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 3455677899999999999999998763 34444444444
No 398
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.41 E-value=0.45 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=27.9
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEEecC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 717 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~v~~ 717 (934)
+.=|.|-|+-|+||||+++.+++.+..+...+.-
T Consensus 3 Gk~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHhCCEEEEE
Confidence 4456788999999999999999998777665553
No 399
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.28 E-value=0.3 Score=44.98 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.8
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|++.+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998764
No 400
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=81.23 E-value=0.23 Score=50.91 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=15.1
Q ss_pred CCcceecCCCCCcchHHH
Q 002337 684 RSGVLLYGPPGTGKTLLA 701 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~la 701 (934)
...+++.|+||||||+++
T Consensus 24 ~g~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 24 EGPLLIMAGAGSGKTRVL 41 (318)
T ss_dssp SSCEEEEECTTSCHHHHH
T ss_pred CCCEEEEecCCccHHHHH
Confidence 356899999999999754
No 401
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=81.13 E-value=0.3 Score=45.18 Aligned_cols=22 Identities=27% Similarity=0.391 Sum_probs=19.6
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+|.+.+...
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4899999999999999998754
No 402
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.87 E-value=0.31 Score=44.87 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=19.5
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||++++.+.+.
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5889999999999999998753
No 403
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.86 E-value=0.3 Score=45.47 Aligned_cols=21 Identities=33% Similarity=0.499 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.+++.|++|+|||+|+..+.+
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998865
No 404
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.69 E-value=0.31 Score=45.80 Aligned_cols=21 Identities=29% Similarity=0.398 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|++|+|||+|++.+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 489999999999999998874
No 405
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=80.52 E-value=0.69 Score=44.10 Aligned_cols=31 Identities=23% Similarity=0.139 Sum_probs=22.1
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEEE
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFLS 714 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i~ 714 (934)
++++++.-|+|+|||.++....-......+.
T Consensus 40 g~~vlv~apTGsGKT~~~~~~~~~~~~~~~~ 70 (206)
T d1oywa2 40 GRDCLVVMPTGGGKSLCYQIPALLLNGLTVV 70 (206)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHHSSSEEEE
T ss_pred CCCEEEEcCCCCCCcchhhhhhhhccCceEE
Confidence 4689999999999999876554444333333
No 406
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.47 E-value=0.45 Score=44.56 Aligned_cols=22 Identities=14% Similarity=0.172 Sum_probs=19.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
.|++.|.+|+|||+|++.+...
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4999999999999999988764
No 407
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=80.18 E-value=0.32 Score=49.94 Aligned_cols=24 Identities=25% Similarity=0.452 Sum_probs=20.5
Q ss_pred cc-eecCCCCCcchHHHHHHHHHcC
Q 002337 686 GV-LLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 686 ~i-Ll~GppGtGKT~lakalA~~~~ 709 (934)
++ +|+||+|+|||++..||+-.++
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHC
Confidence 44 8999999999999999986553
No 408
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=80.07 E-value=0.4 Score=46.74 Aligned_cols=22 Identities=32% Similarity=0.401 Sum_probs=19.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|..|+|||+|++.+...
T Consensus 8 KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4899999999999999988644
No 409
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.82 E-value=0.35 Score=44.60 Aligned_cols=21 Identities=33% Similarity=0.343 Sum_probs=19.1
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|+|.|.+|+|||+|++.+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 410
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.65 E-value=0.37 Score=44.55 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.5
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+|.+.+...
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4789999999999999998763
No 411
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.57 E-value=0.33 Score=45.00 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.+++.|++|+|||+|++.+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999999876
No 412
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.49 E-value=0.36 Score=44.69 Aligned_cols=21 Identities=33% Similarity=0.537 Sum_probs=18.8
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|++|+|||+|+..+.+
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 478999999999999998864
No 413
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=79.48 E-value=0.27 Score=45.91 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=19.2
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|+|.|+||+|||+|..++.+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999999975
No 414
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.27 E-value=0.44 Score=46.62 Aligned_cols=30 Identities=13% Similarity=0.147 Sum_probs=25.3
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCCcEE
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSLNFL 713 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~~~i 713 (934)
|+-|.+-|+-|+||||+++.+++.++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 456889999999999999999998865443
No 415
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.14 E-value=0.38 Score=44.41 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=19.7
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 6899999999999999998753
No 416
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=78.99 E-value=1.1 Score=44.82 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=29.2
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
..++-|++.|.-|+||||++-++|..+ |..+..|++.
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 445668899999999999999888876 6666666654
No 417
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=78.92 E-value=0.36 Score=49.08 Aligned_cols=21 Identities=33% Similarity=0.474 Sum_probs=18.4
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
-.+|+||+|+|||++.+|+.-
T Consensus 25 ~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 347899999999999999964
No 418
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.88 E-value=0.28 Score=45.19 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=20.6
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
...|++.|++|+|||+|...+...
T Consensus 4 ~~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 4 SRKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCcCHHHHHHHHHhC
Confidence 346899999999999999998753
No 419
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.86 E-value=0.39 Score=43.97 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|++.+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4889999999999999998753
No 420
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.77 E-value=0.34 Score=44.53 Aligned_cols=22 Identities=32% Similarity=0.536 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||++++.+...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999998753
No 421
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.74 E-value=0.36 Score=44.44 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=19.7
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+|+..+...
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999998763
No 422
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.69 E-value=0.37 Score=44.46 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=18.8
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|+|||+|...+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 478999999999999998875
No 423
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.48 E-value=0.5 Score=44.31 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=20.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el 421 (934)
-|+|.|..|+|||+|++.+...-
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 38999999999999999997664
No 424
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=78.03 E-value=1.4 Score=42.75 Aligned_cols=22 Identities=41% Similarity=0.502 Sum_probs=19.1
Q ss_pred ceecCCCCCcchHHHHHHHHHc
Q 002337 687 VLLYGPPGTGKTLLAKAVATEC 708 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~ 708 (934)
.++.|..|+||||+.+.+.+..
T Consensus 6 ~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEeeCCCCCHHHHHHHHHhcC
Confidence 5789999999999999987653
No 425
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=78.00 E-value=0.44 Score=44.63 Aligned_cols=21 Identities=33% Similarity=0.547 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|||||+|+..+.+
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 488999999999999998875
No 426
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=77.99 E-value=1.6 Score=43.73 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=26.6
Q ss_pred CCCCcceecCCCCCcchHHHHHHHHH---cCCcEEEecCcc
Q 002337 682 RKRSGVLLYGPPGTGKTLLAKAVATE---CSLNFLSVKGPE 719 (934)
Q Consensus 682 ~~~~~iLl~GppGtGKT~lakalA~~---~~~~~i~v~~~~ 719 (934)
..+...||+|..|+|||.++-..+.. .|.....+-..+
T Consensus 102 ~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~ 142 (264)
T d1gm5a3 102 EKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTS 142 (264)
T ss_dssp SSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCH
T ss_pred cCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehH
Confidence 34678899999999999988766543 355555544433
No 427
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=77.82 E-value=0.67 Score=47.13 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el 421 (934)
+..+++.|++|+|||+|+..+++..
T Consensus 43 GQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 43 GQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp TCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 4458999999999999999999865
No 428
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=77.77 E-value=0.42 Score=48.54 Aligned_cols=23 Identities=26% Similarity=0.465 Sum_probs=19.8
Q ss_pred ceecCCCCCcchHHHHHHHHHcC
Q 002337 687 VLLYGPPGTGKTLLAKAVATECS 709 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~ 709 (934)
-+|+||+|+|||++.+|++..++
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 47999999999999999976553
No 429
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.57 E-value=0.39 Score=44.38 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=19.7
Q ss_pred CcceecCCCCCcchHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~ 706 (934)
-.|+|.|.+|+|||+|.+.+..
T Consensus 6 ~Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 6 YRLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 3699999999999999998865
No 430
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.45 E-value=0.31 Score=47.50 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=22.9
Q ss_pred CcceecCCCCCcchHHHHHHHHHcCC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
+-|.+-|+-|+||||+++.+++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999998754
No 431
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.28 E-value=0.45 Score=44.28 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=19.8
Q ss_pred CcceecCCCCCcchHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~ 706 (934)
-.|++.|.+|+|||++++.+.+
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999999875
No 432
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.22 E-value=0.41 Score=43.84 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|+|||+|++.+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999999875
No 433
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.22 E-value=0.47 Score=43.75 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=19.1
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|++|+|||++++.+.+
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998865
No 434
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.04 E-value=0.35 Score=45.04 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=20.1
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
..|++.|++|+|||+|+..+...
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 46899999999999999988764
No 435
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=76.98 E-value=0.64 Score=46.43 Aligned_cols=24 Identities=25% Similarity=0.432 Sum_probs=21.2
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
.-.|+|.|.||+|||++..++.++
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Confidence 457999999999999999999754
No 436
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.87 E-value=0.48 Score=43.56 Aligned_cols=22 Identities=27% Similarity=0.416 Sum_probs=19.5
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|.+.+.+.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998753
No 437
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.79 E-value=0.45 Score=44.18 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=20.0
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|.+|+|||+|++.+...
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 36999999999999999988753
No 438
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=76.78 E-value=0.58 Score=47.66 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=23.5
Q ss_pred cceecCCCCCcchHHHHHHHHHc---CCcEEEecCccc
Q 002337 686 GVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPEL 720 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~l 720 (934)
-|.+.|++|+|||++++++++.+ +.+...+.+.++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 47789999999999999998765 455555555444
No 439
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.52 E-value=0.47 Score=43.79 Aligned_cols=22 Identities=45% Similarity=0.718 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|++.+.+.
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCcCHHHHHHHHhCC
Confidence 4789999999999999988653
No 440
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.49 E-value=0.45 Score=44.03 Aligned_cols=21 Identities=33% Similarity=0.499 Sum_probs=19.0
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|+|||++++.+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998865
No 441
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=76.05 E-value=0.4 Score=45.36 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=19.4
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|.|.|+||+|||+|.+++.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 599999999999999999974
No 442
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.53 E-value=0.54 Score=43.29 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=19.2
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.+++.|.+|+|||+|++.+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5889999999999999987653
No 443
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=75.45 E-value=1.3 Score=42.44 Aligned_cols=31 Identities=16% Similarity=0.020 Sum_probs=25.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCcEEEEec
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSC 430 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~~~~I~~ 430 (934)
.+|.+|+|+|||.++-.++.+++...+.+..
T Consensus 88 ~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 88 GCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp EEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred cEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 5788999999999999999998877665544
No 444
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=75.15 E-value=1.6 Score=43.86 Aligned_cols=55 Identities=24% Similarity=0.332 Sum_probs=36.6
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHc-CC-cEEEecCccccccccchhhhhhHHHHHHHH
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATEC-SL-NFLSVKGPELINMYIGESEKNVRDIFQKAR 740 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~-~~-~~i~v~~~~l~~~~~Gese~~v~~lf~~A~ 740 (934)
.+-++..++++|++|+|||+++..++... .. ..+.|- -.+||....+.++++...
T Consensus 64 pigkGQr~~If~~~g~GKt~l~~~i~~~~~~~~~~v~V~------~~iGer~~ev~~~~~~~~ 120 (276)
T d2jdid3 64 PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVF------AGVGERTREGNDLYHEMI 120 (276)
T ss_dssp CEETTCEEEEEECTTSSHHHHHHHHHHHHTTTCSSEEEE------EEESCCHHHHHHHHHHHH
T ss_pred cccCCCEEEeeCCCCCCHHHHHHHHHHHHHhhCCCeEEE------EEeccChHHHHHHHHHHH
Confidence 34457789999999999999999998663 11 111111 136777676777666554
No 445
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=75.13 E-value=0.58 Score=43.14 Aligned_cols=21 Identities=29% Similarity=0.457 Sum_probs=19.2
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|+|||++++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999999865
No 446
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=74.78 E-value=2.2 Score=41.74 Aligned_cols=37 Identities=22% Similarity=0.113 Sum_probs=26.6
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecCcc
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKGPE 719 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~~~ 719 (934)
.+...||+|.+|+|||.++-..+... |...+.+-...
T Consensus 75 ~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 75 LAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTT 114 (233)
T ss_dssp SCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHH
Confidence 45788999999999999887665443 55555554433
No 447
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.75 E-value=0.6 Score=42.83 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=19.6
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|.+|+|||+|++.+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999998754
No 448
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.66 E-value=0.53 Score=44.04 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=20.1
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|.+|+|||+|.+.+...
T Consensus 6 iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 46899999999999999988753
No 449
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=74.51 E-value=0.4 Score=44.81 Aligned_cols=27 Identities=30% Similarity=0.457 Sum_probs=22.5
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHH
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~ 706 (934)
+.++.-.|++.|++|+|||++.+.+..
T Consensus 13 ~~~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 13 GSNKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp TCSSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHhc
Confidence 445567899999999999999998753
No 450
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.47 E-value=0.6 Score=43.24 Aligned_cols=21 Identities=43% Similarity=0.601 Sum_probs=18.9
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|+|.|.+|+|||+|++.+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998864
No 451
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=74.35 E-value=0.74 Score=42.81 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=19.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~e 420 (934)
-|+|.|..|+|||+|++.+...
T Consensus 4 KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 3899999999999999987654
No 452
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.32 E-value=0.64 Score=42.90 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=20.0
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|.+|+|||++++.+...
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 36889999999999999998763
No 453
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=74.18 E-value=1 Score=45.12 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=27.9
Q ss_pred CCCcceecCCCCCcchHHHHHHHHHc---CCcEEEecC
Q 002337 683 KRSGVLLYGPPGTGKTLLAKAVATEC---SLNFLSVKG 717 (934)
Q Consensus 683 ~~~~iLl~GppGtGKT~lakalA~~~---~~~~i~v~~ 717 (934)
.++-+++.|.-|+||||++-++|..+ |..+.-|++
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 46788899999999999998887655 667766664
No 454
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=74.11 E-value=0.63 Score=48.48 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=22.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHhCC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~elg~ 423 (934)
-|.+-|+-|+||||+++.+++.++.
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEEECCccCCHHHHHHHHHHHhcc
Confidence 3889999999999999999999854
No 455
>d2fug31 b.52.2.2 (3:686-767) NADH-quinone oxidoreductase chain 3, Nqo3, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=73.94 E-value=0.47 Score=38.90 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=22.1
Q ss_pred EEeecHhhhhhccccccceEEEeecC
Q 002337 95 LLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 95 ~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
+|.+++.+.++|||..||||.|.+..
T Consensus 30 ~v~i~P~dA~~lGi~~Gd~V~V~s~~ 55 (82)
T d2fug31 30 ELWAHPETARAEALPEGAQVAVETPF 55 (82)
T ss_dssp --CCCSSSCSTTTCCTTCEEEEEETT
T ss_pred EEEECHHHHHHcCCCcCCEEEEEcCC
Confidence 89999999999999999999998643
No 456
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.69 E-value=0.43 Score=44.24 Aligned_cols=21 Identities=33% Similarity=0.469 Sum_probs=9.1
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|.+|+|||+|+..+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 488999999999999987764
No 457
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.59 E-value=0.56 Score=45.99 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=22.0
Q ss_pred CCcceecCCCCCcchHHHHHHHHHcCC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~~~~ 710 (934)
++..+|.|++|+|||+|..++......
T Consensus 95 ~kt~~~~G~SGVGKSTLiN~L~~~~~~ 121 (225)
T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLKL 121 (225)
T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCCC
T ss_pred CCeEEEECCCCCCHHHHHHhhcchhhh
Confidence 356789999999999999999765433
No 458
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=73.51 E-value=0.6 Score=43.08 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=19.1
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|.|.|.||+|||+|..++.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999975
No 459
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=73.40 E-value=1.6 Score=40.53 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=19.3
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
+|-+.|.|++|||+|..++.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 688999999999999999974
No 460
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.30 E-value=0.6 Score=44.15 Aligned_cols=22 Identities=32% Similarity=0.523 Sum_probs=19.2
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+|+..+.+.
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 4889999999999999988753
No 461
>d2iv2x1 b.52.2.2 (X:565-715) Formate dehydrogenase H {Escherichia coli [TaxId: 562]}
Probab=72.83 E-value=1.4 Score=40.31 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=26.0
Q ss_pred CCceEEeecHhhhhhccccccceEEEeecC
Q 002337 91 DDSALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 91 d~~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
++..+|.++....++|||..||||.|.+..
T Consensus 39 ~e~~~v~inP~DA~~lGI~dGd~V~V~s~~ 68 (151)
T d2iv2x1 39 DEPGYAQINTEDAKRLGIEDEALVWVHSRK 68 (151)
T ss_dssp CSSCEEEEEHHHHHHHTCCTTCEEEEECSS
T ss_pred ccceEEEECHHHHHHcCCCCCCEEEEECCC
Confidence 344599999999999999999999998643
No 462
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.81 E-value=0.64 Score=43.45 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=19.9
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
..|+|.|.+|+|||++++.+...
T Consensus 3 ~KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 35899999999999999988763
No 463
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=72.80 E-value=0.67 Score=43.16 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=20.9
Q ss_pred CCcceecCCCCCcchHHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~ 707 (934)
+-.|.+.|.+|+|||+|..++.+.
T Consensus 8 ~~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 8 AIKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
Confidence 457899999999999999999753
No 464
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=72.79 E-value=0.85 Score=43.81 Aligned_cols=26 Identities=23% Similarity=0.074 Sum_probs=22.1
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~el 421 (934)
|..+|.+.|-+++|||||+.++...+
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHh
Confidence 45679999999999999999996543
No 465
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=72.66 E-value=9.6 Score=35.85 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=18.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHH
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARR 420 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~e 420 (934)
..+++..|+|+|||+..-..+-+
T Consensus 43 ~d~iv~a~TGsGKT~~~~l~~~~ 65 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAIPLIE 65 (208)
T ss_dssp SEEEEECCSSSSHHHHHHHHHHH
T ss_pred CCeeeechhcccccceeeccccc
Confidence 46999999999999977655544
No 466
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=71.86 E-value=1.1 Score=42.01 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=16.8
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 002337 399 AVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~ 419 (934)
++|+++|+|+|||.++-.++.
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHH
T ss_pred CeEEEeCCCCcHHHHHHHHHH
Confidence 478999999999986665554
No 467
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.71 E-value=0.82 Score=48.81 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=21.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHH
Q 002337 396 FRVAVLLHGLPGCGKRTVVRYVAR 419 (934)
Q Consensus 396 ~~~~VLL~GppGtGKTtLaralA~ 419 (934)
.+..|.+.|.||+|||||+.++.+
T Consensus 55 ~~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 55 SVLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHhC
Confidence 345699999999999999999976
No 468
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.57 E-value=0.79 Score=48.30 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=20.4
Q ss_pred ceecCCCCCcchHHHHHHHHHcCC
Q 002337 687 VLLYGPPGTGKTLLAKAVATECSL 710 (934)
Q Consensus 687 iLl~GppGtGKT~lakalA~~~~~ 710 (934)
-+++||+|+|||++..|++..+|.
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg~ 51 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLGV 51 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 378999999999999999876543
No 469
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.55 E-value=0.69 Score=43.36 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=19.9
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|.+|+|||+|.+.+...
T Consensus 10 ~Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 10 LKCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhhC
Confidence 36899999999999999988753
No 470
>d2jioa1 b.52.2.2 (A:601-723) Periplasmic nitrate reductase alpha chain, NapA {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=71.54 E-value=1.3 Score=38.91 Aligned_cols=28 Identities=14% Similarity=0.233 Sum_probs=25.0
Q ss_pred ceEEeecHhhhhhccccccceEEEeecC
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
..+|.+++...++|||..||||.|.+..
T Consensus 40 ~~~v~inp~dA~~~Gi~~Gd~V~v~s~~ 67 (123)
T d2jioa1 40 IAFVEINEEDAARTGIKHGDSVIVETRR 67 (123)
T ss_dssp SCCEEEEHHHHHTTTCCTTCEEEEECSS
T ss_pred ceEEEecHHHHHHhCCCCcceeEEEcCC
Confidence 3489999999999999999999998644
No 471
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=71.48 E-value=1.6 Score=43.25 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=27.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
.|.++|.=|+||||++-.+|..+ |..+..|++.
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 47789999999999998888776 7788888874
No 472
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=71.45 E-value=0.93 Score=48.32 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=26.2
Q ss_pred CCcceecCCCCCcchHHHHHHHHH---cCCcEEEecC
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVATE---CSLNFLSVKG 717 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~~---~~~~~i~v~~ 717 (934)
.+|+++.|++|+|||.+++.+... .+..++.++.
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 479999999999999998776543 3666666654
No 473
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=71.10 E-value=0.6 Score=43.55 Aligned_cols=21 Identities=38% Similarity=0.506 Sum_probs=18.6
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|.|.|+||+|||+|..++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 578999999999999999853
No 474
>d1ogya1 b.52.2.2 (A:682-801) Periplasmic nitrate reductase alpha chain, NapA {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=71.02 E-value=1.2 Score=39.03 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=28.5
Q ss_pred ceEEeecHhhhhhccccccceEEEeecCCCcceE-EEEEE
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAETTKQRI-AQVVV 131 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~~~~~~~-~~~~~ 131 (934)
..+|.++....++|||..||||.|.+.. +.+ +++.+
T Consensus 36 ~~~v~inp~dA~~~Gi~dGd~V~v~s~~---G~i~~~~~v 72 (120)
T d1ogya1 36 GAVCFMHPEDARSRGLNRGSEVRVISRR---GEIRTRLET 72 (120)
T ss_dssp SCEEECCHHHHHHTTCCTTCEEEEECSS---CEEEEEEES
T ss_pred ceEEEecHHHHHHhCCCCCCEEEEECCC---CcEEEEEEe
Confidence 3499999999999999999999998644 444 34444
No 475
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=70.62 E-value=1.2 Score=44.82 Aligned_cols=25 Identities=32% Similarity=0.446 Sum_probs=21.8
Q ss_pred ceEEEECCCCCcHHHHHHHHHHHhC
Q 002337 398 VAVLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 398 ~~VLL~GppGtGKTtLaralA~elg 422 (934)
++|.+.|..|+|||||+.++....|
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 5799999999999999999976553
No 476
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=70.58 E-value=1.8 Score=42.88 Aligned_cols=33 Identities=33% Similarity=0.474 Sum_probs=26.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 399 ~VLL~GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
=|++.|.=|+||||++-.+|..+ |..+..|++.
T Consensus 22 iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 37788999999999877776655 7788888875
No 477
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.52 E-value=0.76 Score=43.22 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=19.2
Q ss_pred cceecCCCCCcchHHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~~ 707 (934)
.|++.|++|+|||+|+..+...
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999888653
No 478
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.42 E-value=0.43 Score=44.22 Aligned_cols=21 Identities=43% Similarity=0.537 Sum_probs=18.1
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|++.|++|+|||+|+..+..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 588999999999999998754
No 479
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=70.36 E-value=0.47 Score=43.82 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=20.1
Q ss_pred CCcceecCCCCCcchHHHHHHHH
Q 002337 684 RSGVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 684 ~~~iLl~GppGtGKT~lakalA~ 706 (934)
...|.|.|+|++|||+|.+++..
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 45799999999999999998843
No 480
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=70.04 E-value=2.6 Score=37.73 Aligned_cols=67 Identities=24% Similarity=0.259 Sum_probs=39.6
Q ss_pred eecCCCCCcchH-HHHHH--HHHcCCcEEEecCccccccc-------cchhh-----hhhHHHHHHHHh----CCCcEEE
Q 002337 688 LLYGPPGTGKTL-LAKAV--ATECSLNFLSVKGPELINMY-------IGESE-----KNVRDIFQKARS----ARPCVIF 748 (934)
Q Consensus 688 Ll~GppGtGKT~-lakal--A~~~~~~~i~v~~~~l~~~~-------~Gese-----~~v~~lf~~A~~----~~p~vlf 748 (934)
+++||-.+|||+ |.+.+ ....+.+++.++...- ++| .|... ....+++..... ....+|+
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D-~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI~ 84 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKID-TRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIG 84 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-GGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEEE
T ss_pred EEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEccc-ccccceEEcccCceeeeEEeccchhhHHHHHhhccccCcCEEE
Confidence 678999999998 66665 3445777777764311 112 11111 112344443322 2567999
Q ss_pred ecccccc
Q 002337 749 FDELDSL 755 (934)
Q Consensus 749 iDEid~l 755 (934)
+||+.-+
T Consensus 85 IDE~QFf 91 (139)
T d2b8ta1 85 IDEVQFF 91 (139)
T ss_dssp ECSGGGS
T ss_pred echhhhc
Confidence 9999776
No 481
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=69.83 E-value=0.76 Score=47.78 Aligned_cols=24 Identities=29% Similarity=0.444 Sum_probs=22.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGI 423 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~ 423 (934)
|.+-|+-|+||||+++.+++.++.
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 789999999999999999999864
No 482
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=68.90 E-value=1.4 Score=44.46 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=22.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHhC
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRLG 422 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~elg 422 (934)
-++|.+.|..|+|||||+.++....|
T Consensus 6 iRni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 6 LRNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 35899999999999999999987654
No 483
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.74 E-value=2.5 Score=42.44 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=21.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el 421 (934)
+..++++|++|+|||+|+..++...
T Consensus 68 GQr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 68 GGKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp TCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCHHHHHHHHHHHH
Confidence 3448999999999999999998764
No 484
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.63 E-value=2.5 Score=40.37 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=24.8
Q ss_pred ceEEEECC-CCCcHHHHHHHHHHHh---CCcEEEEec
Q 002337 398 VAVLLHGL-PGCGKRTVVRYVARRL---GIHVVEYSC 430 (934)
Q Consensus 398 ~~VLL~Gp-pGtGKTtLaralA~el---g~~~~~I~~ 430 (934)
+-|.++|+ -|+||||++-.+|..+ |..+..+++
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34777855 8999999999988776 556666654
No 485
>d1vlfm1 b.52.2.2 (M:729-875) Transhydroxylase alpha subunit, AthL {Pelobacter acidigallici [TaxId: 35816]}
Probab=68.49 E-value=1.7 Score=39.32 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=25.5
Q ss_pred ceEEeecHhhhhhccccccceEEEeecC
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
.-+|.+++...+++||..||||.|.|..
T Consensus 41 ~~~v~inp~dA~~~GI~dGD~V~V~n~~ 68 (147)
T d1vlfm1 41 YWIMRVNSIDAEARGIKNGDLIRAYNDR 68 (147)
T ss_dssp EEEEEEEHHHHHTTTCCTTCEEEEEETT
T ss_pred CceeeeCHHHHHHcCCCCCCEEEEECCC
Confidence 4589999999999999999999999755
No 486
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=68.42 E-value=2.1 Score=41.46 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=23.6
Q ss_pred CceEEEECCCCCcHHHHHHHHHHHh---CCcEEEEec
Q 002337 397 RVAVLLHGLPGCGKRTVVRYVARRL---GIHVVEYSC 430 (934)
Q Consensus 397 ~~~VLL~GppGtGKTtLaralA~el---g~~~~~I~~ 430 (934)
++++++.+|+|+|||+.+-..+-.+ |...+.+..
T Consensus 58 g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~P 94 (237)
T d1gkub1 58 KESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFP 94 (237)
T ss_dssp TCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEES
T ss_pred CCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEec
Confidence 4578999999999998766555433 445555543
No 487
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=68.42 E-value=0.7 Score=42.89 Aligned_cols=21 Identities=38% Similarity=0.479 Sum_probs=18.8
Q ss_pred cceecCCCCCcchHHHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAVAT 706 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakalA~ 706 (934)
.|.|.|.||+|||+|..++.+
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999999964
No 488
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=67.38 E-value=3.1 Score=41.97 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=40.2
Q ss_pred CCCCCCcceecCCCCCcchHHHHHHHHHc---------CCcEEEecCccccccccchhhhhhHHHHHHHHhC---CCcEE
Q 002337 680 GLRKRSGVLLYGPPGTGKTLLAKAVATEC---------SLNFLSVKGPELINMYIGESEKNVRDIFQKARSA---RPCVI 747 (934)
Q Consensus 680 ~~~~~~~iLl~GppGtGKT~lakalA~~~---------~~~~i~v~~~~l~~~~~Gese~~v~~lf~~A~~~---~p~vl 747 (934)
.+..+..++++|++|+|||+++..++... ...++.+- -.+|+....+.++.+..... +.+|+
T Consensus 64 pig~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~------~~IGer~~E~~e~~~~~~~~~~~~~tvv 137 (285)
T d2jdia3 64 PIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIY------VAIGQKRSTVAQLVKRLTDADAMKYTIV 137 (285)
T ss_dssp CCBTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEE------EEESCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred CccCCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEE------eeeCccHHHHHHHHHHhcccccccceEE
Confidence 45668899999999999999988776432 11122111 12566666666666665432 33566
Q ss_pred Eec
Q 002337 748 FFD 750 (934)
Q Consensus 748 fiD 750 (934)
+.-
T Consensus 138 v~~ 140 (285)
T d2jdia3 138 VSA 140 (285)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 489
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.13 E-value=1 Score=42.20 Aligned_cols=19 Identities=32% Similarity=0.552 Sum_probs=17.9
Q ss_pred cceecCCCCCcchHHHHHH
Q 002337 686 GVLLYGPPGTGKTLLAKAV 704 (934)
Q Consensus 686 ~iLl~GppGtGKT~lakal 704 (934)
.|++.|.+|+|||++++.+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5899999999999999998
No 490
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=66.81 E-value=2.2 Score=40.08 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=25.2
Q ss_pred ceEEEECC-CCCcHHHHHHHHHHHh---CCcEEEEe
Q 002337 398 VAVLLHGL-PGCGKRTVVRYVARRL---GIHVVEYS 429 (934)
Q Consensus 398 ~~VLL~Gp-pGtGKTtLaralA~el---g~~~~~I~ 429 (934)
+.+++.|- +|+||||++-.+|..+ |..+..++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 35789998 5999999998888776 66666664
No 491
>d1eu1a1 b.52.2.2 (A:626-780) Dimethylsulfoxide reductase (DMSO reductase) {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=66.73 E-value=2.1 Score=38.95 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=24.9
Q ss_pred ceEEeecHhhhhhccccccceEEEeecC
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
.-+|.++..+-++|||..||||+|.|..
T Consensus 41 ~~~v~Inp~dA~~~GI~dGD~V~V~n~~ 68 (155)
T d1eu1a1 41 HEPCLINPADAAARGIADGDVLRVFNDR 68 (155)
T ss_dssp BCEEEECHHHHHTTTCCTTCEEEEECSS
T ss_pred CCeEEECHHHHHHcCCCCcCEEEEeecC
Confidence 3489999999999999999999999643
No 492
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=66.48 E-value=0.98 Score=46.80 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHhCCc
Q 002337 400 VLLHGLPGCGKRTVVRYVARRLGIH 424 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~elg~~ 424 (934)
|.+-|+=|+||||+++.+++.++..
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~~~ 31 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGSRD 31 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC----C
T ss_pred EEEECCcCCCHHHHHHHHHHHhCCC
Confidence 7888999999999999999887543
No 493
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=66.36 E-value=1.3 Score=41.54 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=22.7
Q ss_pred CcceecCCCCCcchHHHHHHHH----HcCCcEEEecC
Q 002337 685 SGVLLYGPPGTGKTLLAKAVAT----ECSLNFLSVKG 717 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~----~~~~~~i~v~~ 717 (934)
.+.++.+|+|+|||.++-.++. ..+...+.+-.
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 4688999999999987665553 23445555543
No 494
>d1h0ha1 b.52.2.2 (A:813-977) Tungsten containing formate dehydrogenase, large subunit {Desulfovibrio gigas [TaxId: 879]}
Probab=65.97 E-value=1.9 Score=39.74 Aligned_cols=28 Identities=11% Similarity=0.217 Sum_probs=25.2
Q ss_pred ceEEeecHhhhhhccccccceEEEeecC
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
.-+|.++..+-++|||..||||+|.+..
T Consensus 67 ~~~v~i~p~dA~~lGi~dGD~V~V~s~~ 94 (165)
T d1h0ha1 67 QMFCEMSEELATLRGIKNGDKVILESVR 94 (165)
T ss_dssp SCEEEECHHHHHHHTCCTTCEEEEEETT
T ss_pred ceEEEECHHHHHHcCCCcCCEEEEECCC
Confidence 4489999999999999999999998644
No 495
>d1kqfa1 b.52.2.2 (A:851-1015) Formate dehydrogenase N, alpha subunit {Escherichia coli [TaxId: 562]}
Probab=65.66 E-value=2.1 Score=39.33 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=25.0
Q ss_pred ceEEeecHhhhhhccccccceEEEeecC
Q 002337 93 SALLGLSTCVLKQLSVTSGSLVLVKNAE 120 (934)
Q Consensus 93 ~~~v~l~~~~l~~l~~~~G~~v~v~~~~ 120 (934)
..+|.++..+-++|||..||||.|.|..
T Consensus 67 ~p~v~inp~dA~~lGI~dGD~V~v~s~~ 94 (165)
T d1kqfa1 67 EQFVEISETLAAAKGINNGDRVTVSSKR 94 (165)
T ss_dssp SCEEEECHHHHHHHTCCTTCEEEEECSS
T ss_pred CcEEEEcHhHHHHcCCCccceeEEeCCC
Confidence 3489999999999999999999998644
No 496
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=65.34 E-value=1.8 Score=42.02 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=20.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHh
Q 002337 400 VLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 400 VLL~GppGtGKTtLaralA~el 421 (934)
|.+.|.+++|||||+.++.+..
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 8999999999999999998765
No 497
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.06 E-value=1.4 Score=40.97 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=20.2
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|++.|++|+|||+|...+...
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 47899999999999999988664
No 498
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=63.67 E-value=2.2 Score=37.30 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=23.5
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHHh
Q 002337 395 KFRVAVLLHGLPGCGKRTVVRYVARRL 421 (934)
Q Consensus 395 ~~~~~VLL~GppGtGKTtLaralA~el 421 (934)
+.+-.|+|.|-.|+||+|+++++...+
T Consensus 4 kqgf~i~~tg~~~~gk~~ia~al~~~l 30 (122)
T d1g8fa3 4 KQGFSIVLGNSLTVSREQLSIALLSTF 30 (122)
T ss_dssp GCCEEEEECTTCCSCHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCCCCHHHHHHHHHHHH
Confidence 345679999999999999999998776
No 499
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=62.87 E-value=1.3 Score=42.83 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=19.9
Q ss_pred CcceecCCCCCcchHHHHHHHHH
Q 002337 685 SGVLLYGPPGTGKTLLAKAVATE 707 (934)
Q Consensus 685 ~~iLl~GppGtGKT~lakalA~~ 707 (934)
-.|+|.|+.|+|||++++.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 46899999999999999988543
No 500
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=61.89 E-value=3.7 Score=39.02 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=24.6
Q ss_pred EEEE-CCCCCcHHHHHHHHHHHh---CCcEEEEecC
Q 002337 400 VLLH-GLPGCGKRTVVRYVARRL---GIHVVEYSCH 431 (934)
Q Consensus 400 VLL~-GppGtGKTtLaralA~el---g~~~~~I~~~ 431 (934)
|.+. |-.|+||||++-.+|..+ |..+..|++.
T Consensus 4 Iav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 4 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 5555 568999999999888776 6677777663
Done!