Query 002339
Match_columns 934
No_of_seqs 331 out of 2389
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 21:49:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002339.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002339hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 3E-160 6E-165 1415.7 58.3 853 33-934 11-867 (1151)
2 PLN03190 aminophospholipid tra 100.0 7E-150 1E-154 1380.7 82.6 856 35-934 69-944 (1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 8E-141 2E-145 1318.7 81.8 837 54-934 1-841 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 1E-128 3E-133 1043.3 51.1 782 36-930 63-850 (1051)
5 COG0474 MgtA Cation transport 100.0 3E-102 7E-107 948.8 48.5 646 47-934 50-712 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 2.7E-98 6E-103 832.3 37.9 692 47-932 29-749 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 3.1E-95 7E-100 895.0 55.4 720 46-934 31-819 (1053)
8 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.4E-94 3E-99 893.3 53.0 682 47-934 42-757 (997)
9 KOG0204 Calcium transporting A 100.0 1.7E-94 3.8E-99 800.3 42.2 654 48-931 126-809 (1034)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.2E-93 4.7E-98 880.9 49.1 648 46-933 65-741 (941)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.3E-92 4.9E-97 868.3 55.6 675 74-934 1-703 (917)
12 TIGR01657 P-ATPase-V P-type AT 100.0 7.6E-92 1.6E-96 874.8 59.9 695 48-930 146-868 (1054)
13 PRK10517 magnesium-transportin 100.0 5.4E-89 1.2E-93 829.6 51.7 611 47-931 73-707 (902)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 8.9E-88 1.9E-92 826.0 55.7 639 46-933 29-690 (884)
15 PRK15122 magnesium-transportin 100.0 9.1E-88 2E-92 820.5 51.0 627 46-931 50-707 (903)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.3E-87 2.9E-92 818.8 51.1 611 46-931 38-672 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 7.7E-87 1.7E-91 802.4 52.3 588 48-933 8-606 (755)
18 KOG0208 Cation transport ATPas 100.0 1.2E-83 2.5E-88 724.2 43.1 717 49-925 168-914 (1140)
19 PRK14010 potassium-transportin 100.0 3.5E-75 7.6E-80 676.1 50.9 526 75-932 27-574 (673)
20 KOG0203 Na+/K+ ATPase, alpha s 100.0 2.2E-78 4.7E-83 671.4 20.8 678 49-932 66-777 (1019)
21 PRK01122 potassium-transportin 100.0 8.1E-75 1.8E-79 673.7 50.2 520 73-921 26-567 (679)
22 TIGR01497 kdpB K+-transporting 100.0 1.3E-71 2.8E-76 645.1 52.5 533 73-932 25-579 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 3.2E-71 7E-76 609.4 27.5 639 53-890 175-836 (1160)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-66 2.9E-71 606.3 44.7 465 105-933 3-473 (499)
25 COG2217 ZntA Cation transport 100.0 4.5E-66 9.9E-71 599.6 41.5 482 108-931 176-669 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 2.4E-65 5.3E-70 550.5 22.5 600 47-933 42-656 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 3.2E-62 6.9E-67 586.8 46.9 475 110-931 210-698 (741)
28 KOG0207 Cation transport ATPas 100.0 4.7E-63 1E-67 559.0 31.9 495 113-931 348-855 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 1.4E-60 3E-65 560.5 41.9 480 113-932 25-518 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 1.1E-59 2.4E-64 550.4 39.4 466 111-931 59-536 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 8.4E-59 1.8E-63 541.5 41.9 469 101-931 17-496 (536)
32 PRK10671 copA copper exporting 100.0 1.8E-57 3.8E-62 557.7 45.8 480 110-931 290-782 (834)
33 COG2216 KdpB High-affinity K+ 100.0 6.3E-52 1.4E-56 437.9 31.3 487 107-919 70-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 7.9E-31 1.7E-35 275.3 22.0 222 109-411 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.8 1.3E-20 2.9E-25 195.8 16.3 97 706-881 115-215 (215)
36 COG4087 Soluble P-type ATPase 99.5 3.3E-14 7.2E-19 125.1 9.6 126 707-912 19-146 (152)
37 PF13246 Hydrolase_like2: Puta 99.5 3.3E-14 7.1E-19 124.1 5.7 90 531-638 1-90 (91)
38 PRK10513 sugar phosphate phosp 99.2 5.2E-11 1.1E-15 128.3 11.9 195 706-904 11-254 (270)
39 PRK15126 thiamin pyrimidine py 99.1 1.8E-10 4E-15 124.1 11.5 182 718-904 19-248 (272)
40 COG0561 Cof Predicted hydrolas 99.1 3.6E-10 7.9E-15 121.3 11.4 189 711-904 12-247 (264)
41 PRK10976 putative hydrolase; P 99.1 6.4E-10 1.4E-14 119.6 11.7 63 841-904 181-250 (266)
42 PF08282 Hydrolase_3: haloacid 99.1 4.3E-10 9.2E-15 119.8 9.9 188 717-906 14-246 (254)
43 PLN02887 hydrolase family prot 99.1 5.4E-10 1.2E-14 129.7 10.9 63 841-904 498-565 (580)
44 TIGR01482 SPP-subfamily Sucros 99.0 1.7E-09 3.8E-14 113.1 13.4 179 718-904 15-207 (225)
45 PRK01158 phosphoglycolate phos 99.0 1.8E-09 3.9E-14 113.4 13.4 178 716-904 17-215 (230)
46 TIGR01487 SPP-like sucrose-pho 98.9 1.3E-08 2.8E-13 105.5 14.4 177 718-904 18-205 (215)
47 COG0560 SerB Phosphoserine pho 98.9 1.5E-08 3.4E-13 103.5 13.9 122 717-904 76-201 (212)
48 PRK10530 pyridoxal phosphate ( 98.9 9.3E-09 2E-13 111.0 13.0 61 843-904 192-257 (272)
49 PRK11133 serB phosphoserine ph 98.9 1E-08 2.2E-13 111.5 12.9 132 718-916 181-316 (322)
50 PRK03669 mannosyl-3-phosphogly 98.9 1.5E-08 3.1E-13 109.1 13.8 180 719-904 25-254 (271)
51 TIGR02137 HSK-PSP phosphoserin 98.9 2.1E-08 4.5E-13 102.1 12.3 113 718-899 68-180 (203)
52 TIGR00099 Cof-subfamily Cof su 98.8 2E-08 4.2E-13 107.3 11.5 63 841-904 179-246 (256)
53 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 7.6E-08 1.7E-12 102.7 14.4 180 719-904 17-242 (256)
54 TIGR00338 serB phosphoserine p 98.6 2.1E-07 4.6E-12 96.8 11.8 124 718-907 85-212 (219)
55 TIGR01485 SPP_plant-cyano sucr 98.6 5.1E-07 1.1E-11 95.9 13.8 179 716-897 19-219 (249)
56 TIGR02726 phenyl_P_delta pheny 98.6 3.3E-07 7.2E-12 89.9 10.2 98 725-904 41-140 (169)
57 TIGR02471 sucr_syn_bact_C sucr 98.5 5.7E-07 1.2E-11 94.7 12.4 174 724-903 21-220 (236)
58 TIGR01670 YrbI-phosphatas 3-de 98.5 5.3E-07 1.2E-11 87.8 10.8 96 726-904 36-134 (154)
59 PRK00192 mannosyl-3-phosphogly 98.5 1.6E-06 3.4E-11 93.5 15.4 50 706-758 12-61 (273)
60 TIGR02461 osmo_MPG_phos mannos 98.5 8.5E-07 1.8E-11 92.2 12.7 43 716-758 13-55 (225)
61 KOG1615 Phosphoserine phosphat 98.5 1.9E-07 4.2E-12 89.0 5.3 129 718-907 88-220 (227)
62 PRK14502 bifunctional mannosyl 98.4 3.9E-06 8.5E-11 97.4 15.8 39 719-757 434-472 (694)
63 PRK09484 3-deoxy-D-manno-octul 98.4 1.4E-06 2.9E-11 87.6 9.6 113 725-920 55-177 (183)
64 TIGR02463 MPGP_rel mannosyl-3- 98.4 3.6E-06 7.8E-11 87.7 13.0 48 721-770 19-66 (221)
65 PLN02382 probable sucrose-phos 98.3 6.7E-06 1.5E-10 93.1 14.9 174 722-897 32-230 (413)
66 PRK10187 trehalose-6-phosphate 98.3 5E-06 1.1E-10 88.7 13.1 182 718-907 36-235 (266)
67 PRK13582 thrH phosphoserine ph 98.3 5.1E-06 1.1E-10 85.4 11.7 126 718-911 68-194 (205)
68 PRK12702 mannosyl-3-phosphogly 98.3 5.5E-06 1.2E-10 86.7 11.7 42 717-758 17-58 (302)
69 PTZ00174 phosphomannomutase; P 98.2 3.5E-06 7.5E-11 89.2 9.2 57 841-899 179-242 (247)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 7.7E-06 1.7E-10 83.8 11.4 118 718-899 80-200 (201)
71 TIGR01484 HAD-SF-IIB HAD-super 98.2 7.8E-06 1.7E-10 84.0 11.0 167 718-886 17-204 (204)
72 PF12710 HAD: haloacid dehalog 98.2 8.2E-06 1.8E-10 82.9 9.9 92 721-878 92-192 (192)
73 PLN02954 phosphoserine phospha 98.1 2E-05 4.4E-10 82.3 11.3 133 718-911 84-222 (224)
74 TIGR03333 salvage_mtnX 2-hydro 98.1 1.7E-05 3.7E-10 82.1 9.9 141 717-915 69-211 (214)
75 PRK14501 putative bifunctional 98.0 0.0001 2.2E-09 90.5 17.5 185 719-909 515-717 (726)
76 COG1778 Low specificity phosph 98.0 1.3E-05 2.8E-10 74.3 6.4 97 725-904 42-141 (170)
77 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 4.6E-05 9.9E-10 78.1 9.0 112 716-889 85-199 (202)
78 TIGR01488 HAD-SF-IB Haloacid D 97.8 7.3E-05 1.6E-09 74.8 9.5 40 719-758 74-113 (177)
79 cd01427 HAD_like Haloacid deha 97.8 7.3E-05 1.6E-09 70.8 8.5 43 716-758 22-64 (139)
80 TIGR01489 DKMTPPase-SF 2,3-dik 97.8 8.6E-05 1.9E-09 75.1 9.0 114 717-885 71-186 (188)
81 PRK09552 mtnX 2-hydroxy-3-keto 97.8 0.00013 2.7E-09 75.9 10.2 136 718-911 74-211 (219)
82 PRK13222 phosphoglycolate phos 97.7 0.00025 5.4E-09 74.1 10.6 123 717-911 92-220 (226)
83 COG0546 Gph Predicted phosphat 97.6 0.00048 1.1E-08 71.5 11.1 126 716-911 87-216 (220)
84 TIGR00685 T6PP trehalose-phosp 97.6 0.00062 1.4E-08 71.9 12.0 66 843-911 162-238 (244)
85 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.0004 8.6E-09 71.4 10.1 124 718-911 75-202 (205)
86 PLN02423 phosphomannomutase 97.5 0.0007 1.5E-08 71.4 11.2 50 840-891 179-235 (245)
87 PRK13223 phosphoglycolate phos 97.5 0.00063 1.4E-08 73.1 10.5 120 717-911 100-228 (272)
88 PLN02205 alpha,alpha-trehalose 97.4 0.0055 1.2E-07 75.6 18.5 201 706-911 604-840 (854)
89 PF05116 S6PP: Sucrose-6F-phos 97.4 0.0013 2.8E-08 69.4 11.2 160 730-892 31-212 (247)
90 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00097 2.1E-08 68.9 9.7 42 718-759 85-126 (213)
91 TIGR01545 YfhB_g-proteo haloac 97.3 0.0024 5.2E-08 65.6 11.4 110 718-890 94-204 (210)
92 PRK08238 hypothetical protein; 97.2 0.002 4.3E-08 74.2 11.2 97 718-890 72-168 (479)
93 PRK13226 phosphoglycolate phos 97.2 0.0017 3.6E-08 68.0 9.8 124 718-911 95-223 (229)
94 PRK13288 pyrophosphatase PpaX; 97.2 0.0016 3.4E-08 67.4 9.5 42 718-759 82-123 (214)
95 PLN03243 haloacid dehalogenase 97.2 0.0024 5.1E-08 68.0 10.5 124 718-911 109-233 (260)
96 PRK13225 phosphoglycolate phos 97.1 0.0039 8.6E-08 66.7 11.6 42 718-759 142-183 (273)
97 PLN02580 trehalose-phosphatase 97.1 0.013 2.7E-07 65.0 15.2 67 842-911 292-372 (384)
98 PRK11590 hypothetical protein; 97.1 0.0055 1.2E-07 63.2 11.9 111 718-891 95-206 (211)
99 PRK10826 2-deoxyglucose-6-phos 97.0 0.0022 4.8E-08 66.7 9.0 43 717-759 91-133 (222)
100 smart00775 LNS2 LNS2 domain. T 96.9 0.0059 1.3E-07 59.4 10.2 34 716-749 25-58 (157)
101 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0034 7.4E-08 66.3 9.0 47 717-763 120-166 (277)
102 TIGR03351 PhnX-like phosphonat 96.9 0.0048 1E-07 64.1 10.1 42 717-758 86-127 (220)
103 PRK11587 putative phosphatase; 96.8 0.0047 1E-07 64.0 9.3 118 718-908 83-203 (218)
104 PLN03017 trehalose-phosphatase 96.8 0.059 1.3E-06 59.2 17.9 197 706-911 119-354 (366)
105 PLN02575 haloacid dehalogenase 96.7 0.0099 2.2E-07 65.9 11.0 122 718-911 216-340 (381)
106 TIGR01422 phosphonatase phosph 96.7 0.01 2.2E-07 63.2 10.4 42 718-759 99-140 (253)
107 smart00831 Cation_ATPase_N Cat 96.6 0.0012 2.5E-08 53.6 2.2 45 48-95 17-61 (64)
108 PRK06698 bifunctional 5'-methy 96.6 0.014 3E-07 67.9 11.8 121 718-911 330-452 (459)
109 PLN02770 haloacid dehalogenase 96.5 0.015 3.2E-07 61.7 10.4 42 718-759 108-149 (248)
110 TIGR01672 AphA HAD superfamily 96.5 0.0066 1.4E-07 63.1 7.5 41 718-758 114-158 (237)
111 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.014 3.1E-07 59.3 9.6 44 716-759 104-147 (197)
112 PRK11009 aphA acid phosphatase 96.4 0.01 2.2E-07 61.7 8.3 41 717-757 113-157 (237)
113 PF00690 Cation_ATPase_N: Cati 96.4 0.0011 2.4E-08 54.6 0.7 44 47-93 26-69 (69)
114 PLN02779 haloacid dehalogenase 96.4 0.016 3.4E-07 62.7 9.7 38 718-755 144-181 (286)
115 PRK13478 phosphonoacetaldehyde 96.4 0.027 5.8E-07 60.4 11.5 41 718-758 101-141 (267)
116 PRK06769 hypothetical protein; 96.3 0.022 4.7E-07 56.6 9.5 41 705-745 11-55 (173)
117 TIGR02253 CTE7 HAD superfamily 96.2 0.027 5.9E-07 58.4 9.8 41 718-758 94-134 (221)
118 TIGR01662 HAD-SF-IIIA HAD-supe 96.1 0.021 4.5E-07 53.9 7.9 41 717-757 24-72 (132)
119 PHA02530 pseT polynucleotide k 96.1 0.017 3.7E-07 63.2 8.3 44 715-758 184-227 (300)
120 COG4030 Uncharacterized protei 96.0 0.037 7.9E-07 54.8 8.9 58 848-907 191-254 (315)
121 PLN02940 riboflavin kinase 95.9 0.029 6.3E-07 63.3 9.5 41 718-758 93-134 (382)
122 PRK08942 D,D-heptose 1,7-bisph 95.9 0.042 9.2E-07 55.0 9.6 52 860-911 119-175 (181)
123 PRK14988 GMP/IMP nucleotidase; 95.8 0.042 9E-07 57.2 9.3 41 718-758 93-133 (224)
124 TIGR01428 HAD_type_II 2-haloal 95.8 0.044 9.6E-07 55.8 9.1 41 718-758 92-132 (198)
125 PF13419 HAD_2: Haloacid dehal 95.7 0.029 6.3E-07 55.4 7.4 44 716-759 75-118 (176)
126 PLN02811 hydrolase 95.7 0.038 8.2E-07 57.4 8.3 48 861-908 157-206 (220)
127 COG3769 Predicted hydrolase (H 95.6 0.16 3.4E-06 50.5 11.6 37 722-758 27-63 (274)
128 TIGR01685 MDP-1 magnesium-depe 95.6 0.068 1.5E-06 52.8 9.2 51 708-758 35-86 (174)
129 TIGR01509 HAD-SF-IA-v3 haloaci 95.3 0.08 1.7E-06 52.9 9.2 40 718-758 85-124 (183)
130 TIGR01990 bPGM beta-phosphoglu 95.2 0.048 1.1E-06 54.7 7.2 39 718-758 87-125 (185)
131 PRK09449 dUMP phosphatase; Pro 95.2 0.089 1.9E-06 54.7 9.4 40 718-758 95-134 (224)
132 TIGR02254 YjjG/YfnB HAD superf 95.2 0.071 1.5E-06 55.3 8.6 41 718-759 97-137 (224)
133 TIGR02009 PGMB-YQAB-SF beta-ph 95.1 0.052 1.1E-06 54.5 7.1 40 717-758 87-126 (185)
134 COG4359 Uncharacterized conser 94.8 0.089 1.9E-06 50.6 7.0 110 718-886 73-184 (220)
135 TIGR00213 GmhB_yaeD D,D-heptos 94.6 0.21 4.6E-06 49.7 9.9 48 861-908 123-174 (176)
136 PLN02151 trehalose-phosphatase 94.6 1.3 2.9E-05 48.7 16.4 72 837-911 257-340 (354)
137 TIGR01533 lipo_e_P4 5'-nucleot 94.6 0.2 4.2E-06 53.1 9.8 43 716-758 116-161 (266)
138 smart00577 CPDc catalytic doma 94.5 0.049 1.1E-06 52.5 4.8 42 716-758 43-84 (148)
139 TIGR01549 HAD-SF-IA-v1 haloaci 94.3 0.19 4.2E-06 48.6 8.6 40 716-755 62-101 (154)
140 TIGR01668 YqeG_hyp_ppase HAD s 94.1 0.17 3.6E-06 50.1 7.6 40 718-757 43-83 (170)
141 TIGR01656 Histidinol-ppas hist 94.1 0.15 3.2E-06 49.1 7.0 27 718-744 27-53 (147)
142 TIGR02252 DREG-2 REG-2-like, H 94.0 0.21 4.5E-06 51.0 8.4 39 718-757 105-143 (203)
143 KOG4383 Uncharacterized conser 93.7 0.86 1.9E-05 52.3 12.8 57 703-759 811-867 (1354)
144 TIGR01675 plant-AP plant acid 93.5 0.37 8.1E-06 49.6 9.1 31 717-747 119-149 (229)
145 PF02358 Trehalose_PPase: Treh 93.4 0.3 6.4E-06 51.2 8.5 69 836-904 153-233 (235)
146 TIGR01681 HAD-SF-IIIC HAD-supe 93.2 0.22 4.7E-06 46.7 6.4 39 718-756 29-68 (128)
147 PLN02645 phosphoglycolate phos 93.0 0.36 7.8E-06 52.9 8.6 47 711-757 37-86 (311)
148 TIGR01261 hisB_Nterm histidino 92.8 0.31 6.6E-06 47.7 7.0 26 718-743 29-54 (161)
149 PRK05446 imidazole glycerol-ph 92.6 0.48 1E-05 52.4 8.9 27 717-743 29-55 (354)
150 COG2179 Predicted hydrolase of 92.5 0.95 2.1E-05 43.4 9.3 51 706-758 36-86 (175)
151 TIGR01686 FkbH FkbH-like domai 92.3 0.46 1E-05 52.4 8.4 37 718-754 31-67 (320)
152 PLN02919 haloacid dehalogenase 92.2 0.91 2E-05 58.2 11.9 41 718-758 161-201 (1057)
153 TIGR01691 enolase-ppase 2,3-di 92.1 1.1 2.3E-05 46.3 10.2 40 715-754 92-131 (220)
154 PF08235 LNS2: LNS2 (Lipin/Ned 91.7 1 2.2E-05 43.3 8.8 107 716-883 25-141 (157)
155 PRK10563 6-phosphogluconate ph 91.6 0.22 4.7E-06 51.7 4.6 39 717-758 87-125 (221)
156 TIGR02247 HAD-1A3-hyp Epoxide 91.4 0.43 9.3E-06 49.0 6.5 28 718-745 94-121 (211)
157 PF06888 Put_Phosphatase: Puta 91.1 0.86 1.9E-05 47.2 8.2 42 718-759 71-114 (234)
158 TIGR01664 DNA-3'-Pase DNA 3'-p 90.5 1.2 2.6E-05 43.8 8.4 27 719-745 43-69 (166)
159 KOG4383 Uncharacterized conser 90.1 0.32 6.8E-06 55.7 4.3 48 840-888 971-1020(1354)
160 COG1877 OtsB Trehalose-6-phosp 89.7 4.4 9.5E-05 42.8 12.2 207 706-912 26-252 (266)
161 PRK09456 ?-D-glucose-1-phospha 89.6 0.96 2.1E-05 46.0 7.2 30 718-747 84-113 (199)
162 TIGR01459 HAD-SF-IIA-hyp4 HAD- 89.4 0.84 1.8E-05 48.1 6.8 48 711-758 17-66 (242)
163 PHA02597 30.2 hypothetical pro 88.2 2.4 5.3E-05 42.9 9.0 38 849-886 132-173 (197)
164 COG0241 HisB Histidinol phosph 87.7 4 8.6E-05 40.4 9.5 47 837-883 88-144 (181)
165 PF13344 Hydrolase_6: Haloacid 86.6 0.69 1.5E-05 41.2 3.4 48 711-758 7-57 (101)
166 PLN02177 glycerol-3-phosphate 85.6 3.1 6.7E-05 48.4 8.9 68 845-921 173-240 (497)
167 KOG3120 Predicted haloacid deh 85.4 4.3 9.3E-05 40.8 8.4 41 718-758 84-125 (256)
168 PF03767 Acid_phosphat_B: HAD 85.4 1.4 3.1E-05 45.8 5.5 30 717-746 114-143 (229)
169 TIGR01457 HAD-SF-IIA-hyp2 HAD- 84.1 2.1 4.5E-05 45.3 6.2 56 711-766 10-68 (249)
170 TIGR01458 HAD-SF-IIA-hyp3 HAD- 83.2 1.8 3.9E-05 46.0 5.3 48 711-758 10-64 (257)
171 TIGR01993 Pyr-5-nucltdase pyri 82.4 4.5 9.8E-05 40.4 7.6 38 718-758 84-121 (184)
172 TIGR01684 viral_ppase viral ph 81.6 3.1 6.8E-05 44.2 6.2 41 719-759 146-187 (301)
173 PRK10444 UMP phosphatase; Prov 81.4 1.7 3.8E-05 45.8 4.3 45 711-755 10-54 (248)
174 PRK10725 fructose-1-P/6-phosph 81.1 4.2 9.2E-05 40.6 6.9 36 723-759 92-127 (188)
175 PLN03063 alpha,alpha-trehalose 81.0 51 0.0011 41.2 17.4 44 719-762 533-579 (797)
176 PF09419 PGP_phosphatase: Mito 79.6 6.9 0.00015 38.3 7.4 42 716-757 57-107 (168)
177 TIGR01689 EcbF-BcbF capsule bi 78.8 1.9 4.2E-05 40.0 3.2 33 717-749 23-55 (126)
178 TIGR01452 PGP_euk phosphoglyco 78.6 12 0.00026 40.3 9.8 48 711-758 11-61 (279)
179 TIGR01680 Veg_Stor_Prot vegeta 78.3 11 0.00024 39.7 8.9 31 716-746 143-173 (275)
180 TIGR01657 P-ATPase-V P-type AT 77.2 35 0.00075 44.3 14.9 21 145-165 249-271 (1054)
181 PHA03398 viral phosphatase sup 76.7 5.2 0.00011 42.6 6.0 41 719-759 148-189 (303)
182 TIGR01458 HAD-SF-IIA-hyp3 HAD- 75.5 6 0.00013 42.0 6.3 54 860-913 195-255 (257)
183 PLN03064 alpha,alpha-trehalose 75.4 65 0.0014 40.6 15.8 37 720-756 624-661 (934)
184 PRK10748 flavin mononucleotide 70.3 14 0.0003 38.7 7.5 28 718-746 113-140 (238)
185 COG0637 Predicted phosphatase/ 70.0 12 0.00027 38.6 6.9 44 716-759 84-127 (221)
186 PF13242 Hydrolase_like: HAD-h 68.9 9.7 0.00021 31.6 4.8 46 861-906 21-73 (75)
187 TIGR02251 HIF-SF_euk Dullard-l 68.3 4 8.6E-05 39.9 2.7 43 714-757 38-80 (162)
188 TIGR01517 ATPase-IIB_Ca plasma 67.8 14 0.00031 47.2 8.1 22 145-166 186-207 (941)
189 KOG0210 P-type ATPase [Inorgan 67.4 28 0.00061 41.0 9.3 183 56-245 84-290 (1051)
190 TIGR01663 PNK-3'Pase polynucle 63.9 22 0.00047 41.8 8.0 27 719-745 198-224 (526)
191 KOG3040 Predicted sugar phosph 63.5 14 0.0003 36.9 5.2 49 707-755 12-60 (262)
192 COG1011 Predicted hydrolase (H 63.2 37 0.0008 34.9 9.1 41 718-759 99-139 (229)
193 PF12791 RsgI_N: Anti-sigma fa 62.4 12 0.00026 29.1 3.8 39 134-172 3-42 (56)
194 TIGR02468 sucrsPsyn_pln sucros 61.0 67 0.0015 40.9 11.8 65 824-888 925-1002(1050)
195 PTZ00445 p36-lilke protein; Pr 54.6 23 0.00049 35.9 5.1 28 719-746 76-103 (219)
196 COG0647 NagD Predicted sugar p 52.7 17 0.00038 38.5 4.3 47 709-755 15-61 (269)
197 TIGR01493 HAD-SF-IA-v2 Haloaci 50.5 12 0.00026 36.8 2.6 34 718-758 90-123 (175)
198 COG3700 AphA Acid phosphatase 50.1 35 0.00076 33.1 5.4 39 719-757 115-157 (237)
199 KOG3109 Haloacid dehalogenase- 46.5 1.2E+02 0.0025 31.0 8.5 126 711-904 92-219 (244)
200 COG0474 MgtA Cation transport 46.0 39 0.00085 42.9 6.7 124 145-316 160-287 (917)
201 TIGR01647 ATPase-IIIA_H plasma 45.7 87 0.0019 39.0 9.6 24 643-666 443-466 (755)
202 cd02071 MM_CoA_mut_B12_BD meth 45.0 65 0.0014 29.6 6.4 81 653-758 22-104 (122)
203 TIGR01460 HAD-SF-IIA Haloacid 43.6 43 0.00093 35.0 5.6 47 711-757 7-57 (236)
204 cd02067 B12-binding B12 bindin 40.5 93 0.002 28.3 6.7 82 652-758 21-104 (119)
205 TIGR01106 ATPase-IIC_X-K sodiu 40.0 5.3E+02 0.012 33.3 15.6 126 145-319 161-287 (997)
206 PRK08508 biotin synthase; Prov 38.7 4E+02 0.0086 28.6 12.2 50 723-773 101-166 (279)
207 PF13380 CoA_binding_2: CoA bi 38.4 47 0.001 30.3 4.3 37 721-757 66-103 (116)
208 PF12689 Acid_PPase: Acid Phos 38.0 53 0.0011 32.3 4.8 41 718-758 45-86 (169)
209 TIGR02250 FCP1_euk FCP1-like p 37.8 51 0.0011 32.0 4.7 43 715-758 55-97 (156)
210 smart00831 Cation_ATPase_N Cat 37.1 91 0.002 24.7 5.4 40 280-319 23-62 (64)
211 TIGR01452 PGP_euk phosphoglyco 35.9 1.1E+02 0.0024 32.7 7.5 27 860-886 218-246 (279)
212 PRK10444 UMP phosphatase; Prov 35.9 4E+02 0.0086 28.0 11.4 48 860-907 190-244 (248)
213 PF03120 DNA_ligase_OB: NAD-de 33.2 22 0.00048 30.2 1.1 22 151-172 45-67 (82)
214 TIGR01522 ATPase-IIA2_Ca golgi 32.4 3.2E+02 0.0069 34.8 11.8 23 145-167 137-159 (884)
215 COG1188 Ribosome-associated he 31.9 64 0.0014 28.4 3.7 36 131-170 28-63 (100)
216 TIGR01501 MthylAspMutase methy 31.6 1.5E+02 0.0032 27.9 6.4 81 653-758 24-112 (134)
217 TIGR01524 ATPase-IIIB_Mg magne 31.6 2.1E+02 0.0045 36.4 9.9 25 642-666 515-539 (867)
218 PRK14174 bifunctional 5,10-met 30.7 2.7E+02 0.0058 30.2 9.1 64 841-904 138-213 (295)
219 PRK02261 methylaspartate mutas 30.6 2.1E+02 0.0046 26.9 7.5 80 653-757 26-113 (137)
220 PF11019 DUF2608: Protein of u 30.5 2.9E+02 0.0063 29.1 9.3 38 718-755 81-118 (252)
221 COG2217 ZntA Cation transport 30.1 1.3E+02 0.0028 36.9 7.3 79 643-753 538-617 (713)
222 PF12710 HAD: haloacid dehalog 29.3 23 0.0005 35.2 0.8 14 418-431 1-14 (192)
223 PF04551 GcpE: GcpE protein; 28.9 8.3E+02 0.018 27.1 12.5 114 631-763 146-267 (359)
224 TIGR01459 HAD-SF-IIA-hyp4 HAD- 28.8 64 0.0014 33.7 4.1 23 862-884 214-237 (242)
225 COG0279 GmhA Phosphoheptose is 28.5 5.7E+02 0.012 25.0 10.6 52 853-905 103-161 (176)
226 TIGR01662 HAD-SF-IIIA HAD-supe 28.4 4.6E+02 0.01 23.9 9.6 96 645-758 28-126 (132)
227 PF12148 DUF3590: Protein of u 27.9 41 0.0009 28.6 1.9 24 148-171 58-81 (85)
228 PF13253 DUF4044: Protein of u 27.8 2E+02 0.0044 20.1 4.8 19 288-306 3-21 (35)
229 TIGR02244 HAD-IG-Ncltidse HAD 27.1 86 0.0019 34.7 4.7 37 720-756 186-223 (343)
230 COG2503 Predicted secreted aci 27.0 3.6E+02 0.0078 28.1 8.5 30 718-747 122-151 (274)
231 TIGR02370 pyl_corrinoid methyl 26.7 1.4E+02 0.0031 30.1 6.0 79 653-758 107-188 (197)
232 PRK15122 magnesium-transportin 26.5 2.4E+02 0.0052 35.9 9.2 119 72-197 69-197 (903)
233 TIGR00676 fadh2 5,10-methylene 25.3 3E+02 0.0065 29.4 8.4 84 644-746 14-99 (272)
234 PF06941 NT5C: 5' nucleotidase 24.8 61 0.0013 32.5 2.9 29 718-746 73-101 (191)
235 PRK14194 bifunctional 5,10-met 24.4 3.9E+02 0.0085 29.0 8.9 64 841-904 138-209 (301)
236 TIGR00640 acid_CoA_mut_C methy 23.6 2E+02 0.0044 26.9 5.9 82 652-758 24-107 (132)
237 PF09926 DUF2158: Uncharacteri 23.6 50 0.0011 25.5 1.5 13 157-169 2-14 (53)
238 cd06919 Asp_decarbox Aspartate 23.2 1.4E+02 0.003 26.9 4.3 83 545-676 17-99 (111)
239 KOG2882 p-Nitrophenyl phosphat 22.8 1.4E+02 0.003 32.1 4.9 49 710-758 30-81 (306)
240 TIGR01523 ATPase-IID_K-Na pota 22.4 1.8E+02 0.0039 37.8 7.0 22 145-166 138-159 (1053)
241 PRK10053 hypothetical protein; 22.2 78 0.0017 29.5 2.7 30 398-427 60-89 (130)
242 PF08645 PNK3P: Polynucleotide 22.2 75 0.0016 30.9 2.8 24 720-743 31-54 (159)
243 TIGR00223 panD L-aspartate-alp 22.1 1.4E+02 0.003 27.5 4.2 84 545-677 18-101 (126)
244 PRK14584 hmsS hemin storage sy 21.9 5E+02 0.011 25.0 8.0 15 158-172 131-145 (153)
245 PF03332 PMM: Eukaryotic phosp 21.8 41 0.00089 34.3 0.9 49 843-891 155-210 (220)
246 cd01137 PsaA Metal binding pro 21.8 3.5E+02 0.0077 29.1 8.3 53 705-757 194-250 (287)
247 cd05017 SIS_PGI_PMI_1 The memb 21.6 1.3E+02 0.0029 27.3 4.3 35 720-756 56-90 (119)
248 PRK04980 hypothetical protein; 21.5 1.7E+02 0.0037 26.0 4.5 28 153-180 29-58 (102)
249 PRK05449 aspartate alpha-decar 21.0 1.6E+02 0.0034 27.2 4.3 84 545-677 18-101 (126)
250 PF15584 Imm44: Immunity prote 21.0 43 0.00093 28.8 0.7 20 158-177 13-32 (94)
251 cd03409 Chelatase_Class_II Cla 20.8 2E+02 0.0042 25.0 5.1 29 712-740 36-65 (101)
252 cd00860 ThrRS_anticodon ThrRS 20.7 1.7E+02 0.0037 24.7 4.6 46 712-757 6-52 (91)
253 PRK14010 potassium-transportin 20.6 3.1E+02 0.0067 33.6 8.1 79 643-753 442-521 (673)
254 TIGR01652 ATPase-Plipid phosph 20.3 1.2E+03 0.027 30.3 14.0 178 64-243 14-212 (1057)
255 COG0279 GmhA Phosphoheptose is 20.1 95 0.0021 30.1 2.9 29 721-749 123-151 (176)
256 PF13275 S4_2: S4 domain; PDB: 20.1 63 0.0014 26.1 1.4 24 144-168 37-60 (65)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.9e-160 Score=1415.73 Aligned_cols=853 Identities=60% Similarity=0.994 Sum_probs=770.8
Q ss_pred CCCCeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 002339 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (934)
Q Consensus 33 ~~~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v 112 (934)
++.+|++++|+|+.+..+...|..|+|+|+||++++|||++||+||+|++|+|||++++++++|++|++++++++||+++
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 45689999999966556677999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeec
Q 002339 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~ 192 (934)
+.++++||++||++|+++|+++|++++.|+++++.++...|++|+|||+|++..+|.+|||++||+|++++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999954445999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002339 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||||++|.|++...+......+.+.+++|.|.||.||.++|.|.|++..+++..|++.+|+++|||+|+||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887654566678899999999999999999999998888779999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCC---CccccCCCCCccccCCCCCc
Q 002339 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (934)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 349 (934)
+||+|||+|+|...++.|++++++.+|+.+..++++++++|+++++...+|...... .+||+.... +.
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE---------AA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch---------HH
Confidence 999999999999999999999999999999999999999999999999999874432 367764321 33
Q ss_pred hhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeec
Q 002339 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (934)
Q Consensus 350 ~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (934)
...+..|++++++++.++|+||++++++++++|+++|.+|.+||+++.+.++.+|+++++|+||||++|++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccc
Q 002339 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (934)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (934)
.|.|++|+++|..|+...++.+.....+.+. .......+++.|.|+.+
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGG--------------------------------DVNEHKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccc--------------------------------cccccccccceeccchh
Confidence 9999999999999998766533221110000 00113456788999999
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
.++.+...++...+.+|++++++||++.++.++++..+.|+++||||.|++++|+.+|+.+..|+++.+.++..+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 998888888899999999999999999999976666899999999999999999999999999999999998433
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (934)
...+|++|+++||+|.|||||||||+|+|++.+||||||.+|++++..++....+...+|+++||.+||||||+|||++
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l 603 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYREL 603 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhcc
Confidence 3689999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+++||.+|+++|++|++++ .||++.++++++.+|+||+++|+|++||+||+|||++|+.|++||||+||+|||+.|||+
T Consensus 604 ~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 604 DEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 9999999999999999999 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCchhHHHHHH-HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHH
Q 002339 750 NIGFACSLLRQGMKQICITALNSDSVGKAAK-EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~ 828 (934)
+||.+|+++++++.++.++..+.+....... ....+.+..+..........+... ...++++||+++.++++++....
T Consensus 683 NIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~ 761 (1151)
T KOG0206|consen 683 NIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKK 761 (1151)
T ss_pred HHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHH
Confidence 9999999999999999998877431111100 022233333332222211111112 47899999999999999988899
Q ss_pred HHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccch
Q 002339 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 829 ~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
|..++..|++++|||++|.||+.+|+.+++..+..|+|||||+||++||++||||||++|.||+||.++|||.|.+|++|
T Consensus 762 Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL 841 (1151)
T KOG0206|consen 762 FLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFL 841 (1151)
T ss_pred HHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHH
Confidence 99999999999999999999999999998778999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhchhhhHHhhhheEEEeccC
Q 002339 909 ERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 909 ~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
.+|||+||||+|.|++++++|+|||.
T Consensus 842 ~rLLLVHGhW~Y~R~a~~ilyfFYKN 867 (1151)
T KOG0206|consen 842 ERLLLVHGHWSYIRLAKMILYFFYKN 867 (1151)
T ss_pred hhhheeecceeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999994
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=6.5e-150 Score=1380.73 Aligned_cols=856 Identities=38% Similarity=0.629 Sum_probs=719.8
Q ss_pred CCeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHH
Q 002339 35 CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVV 113 (934)
Q Consensus 35 ~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~ 113 (934)
..|.|++|++... +.+.+|++|.|+|+||++|+|||++||+||++++|+|||+++++|++| +++.+++++++||++++
T Consensus 69 ~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl 147 (1178)
T PLN03190 69 DARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVL 147 (1178)
T ss_pred CceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHH
Confidence 4799999987422 234579999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecC
Q 002339 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (934)
Q Consensus 114 ~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~L 193 (934)
+++++++++||++|+++|+.+|+++++|+ ++|.+++++|++|+|||||+|++||.+|||++||+|++++|.|+|||++|
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEE
Q 002339 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (934)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 273 (934)
||||+|+.|.+++.+... .....++.|.|+||.||+++|.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|
T Consensus 227 dGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVY 304 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304 (1178)
T ss_pred CCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEE
Confidence 999999999988765321 122345789999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCC-------
Q 002339 274 TGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG------- 346 (934)
Q Consensus 274 tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 346 (934)
||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|........||+.+.....+....
T Consensus 305 TG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 384 (1178)
T PLN03190 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYY 384 (1178)
T ss_pred echhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999998877764333345554331110000000
Q ss_pred CCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCce
Q 002339 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (934)
Q Consensus 347 ~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTL 426 (934)
......+..|+.+++++..+||++|++++++++++|+++|.+|.+||++..+.++.||+++++|+||+|+|||+||||||
T Consensus 385 ~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 385 GWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred hhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 00122356788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccc
Q 002339 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (934)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (934)
|+|+|+|++|+++|..|+.+....+..... ... ...+ ....+ ....+.+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~---~~~-------------------~~~~-------~~~~~--~~~~~~~ 513 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAG---YSV-------------------EVDG-------KILRP--KMKVKVD 513 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhc---ccc-------------------cccc-------ccccc--cccccCC
Confidence 999999999999999997532211000000 000 0000 00000 0000011
Q ss_pred ccccccCC--CCCCChhHHHHHHHHHhhcceeeecccCC--C---CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 507 SRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 507 ~~~~~~~~--~~~~~~~~~~~~~~~l~lC~~~~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
..+..... ...+....+.+|+.++++||++.+...++ + ..+.|+++||||.||+++|+.+|+.+..|+++.+.
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 11111100 11122345778999999999999853211 1 24679999999999999999999999999999988
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc-ccccHHHHHHHHHHHHhcC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN-GRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~G 658 (934)
+...+ ....|++++++||+|+|||||||++++++.+++|+||||+.|+++|+.. +....+.+.+++++|+.+|
T Consensus 594 i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~G 667 (1178)
T PLN03190 594 IDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLG 667 (1178)
T ss_pred Eeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcC
Confidence 86544 2678999999999999999999999988999999999999999999863 3346778899999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
+|||++|||.++++|+.+|.+.|.+|..++ .+|++.++++.+.+|+||+++|+++++|++|++++++|+.|+++||++|
T Consensus 668 lRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 668 LRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH----hhhhccCCCCCcEEEEEcC
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS----QMIKLERDPHAAYALIIEG 814 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lvi~g 814 (934)
|+|||+.+||++||++|||+++++..+.++..+.+.+...+....... ....... .............+++++|
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 999999999999999999999998888887665443322222111100 0000000 0000011123467899999
Q ss_pred hhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhH
Q 002339 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQA 894 (934)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a 894 (934)
.++..++++++.+.|.+++..|+++||||++|.||+++|+.+|+..+++|+|||||+||++||++||||||++|+||.||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 99999998888889999999999999999999999999999998446899999999999999999999999999999999
Q ss_pred HHhCcEeecCccchhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 895 VMASDFSIAQFRFLERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 895 ~~~AD~ii~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
+.+|||+|.+|++|.+||++||||+|+|++++++|+|||.
T Consensus 905 ~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN 944 (1178)
T PLN03190 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRN 944 (1178)
T ss_pred HHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999984
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=7.8e-141 Score=1318.69 Aligned_cols=837 Identities=52% Similarity=0.860 Sum_probs=715.7
Q ss_pred CCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 002339 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (934)
Q Consensus 54 ~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~ 132 (934)
|++|.|+|+||++|+|+|++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888999999999999999999999999999999999
Q ss_pred hhccceEEEEeCC-CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCC
Q 002339 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (934)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~ 211 (934)
.+|+++|+|+ |+ |++++++|++|+|||||+|++||.+|||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 75 899999999999999999999999999999999999999999999999999999999998766555
Q ss_pred CChhhhhcCceEEEeeCCCCCcceeEEEEEECC-eeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhccCCCCCc
Q 002339 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (934)
Q Consensus 212 ~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~~~k 290 (934)
.....+..+.|.|.|+.|+++++.|.|++.+++ ...|++.+|+++|||.|+||+|++|+|+|||++||++++....+.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 455667778999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccch
Q 002339 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (934)
Q Consensus 291 ~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~ 370 (934)
+|++|+.+|+++.+++++++++|++++++..+|........||+..... ..+.....+..|++++++++.++|++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999998877776544344688753221 12223455678899999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHH
Q 002339 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (934)
Q Consensus 371 L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 450 (934)
|+++++++++++++++++|.+||+++.+.++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+...+..
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999887788999999999999999999999999999999999999999999998654332
Q ss_pred HHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHH
Q 002339 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (934)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 530 (934)
........+...+ . + .. .....+..++.++.+.+......+..+.+.+|+.++
T Consensus 395 ~~~~~~~~~~~~~---------------~----~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYVE---------------N----E-------NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhccccccc---------------c----c-------cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 1111100000000 0 0 00 000001123444443332222233445678999999
Q ss_pred hhcceeeeccc-CCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCce
Q 002339 531 AICHTAIPELN-EETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (934)
Q Consensus 531 ~lC~~~~~~~~-~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 609 (934)
++||++.+..+ ++...+.|+++||+|.||+++|+.+|+.+.+|+.+.+.+.... .| ....|++++.+||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 99999998762 2234578999999999999999999999999988744332211 11 2578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhh
Q 002339 610 MSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIG 689 (934)
Q Consensus 610 msviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~ 689 (934)
|||||+++++++++|+||||+.|+++|+..++...+.+.+++++|+.+|+||+++|+|.++++|+.+|.++|.+|..++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~- 602 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL- 602 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-
Confidence 9999999888999999999999999998654456778899999999999999999999999999999999999999998
Q ss_pred hcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcC
Q 002339 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769 (934)
Q Consensus 690 ~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~ 769 (934)
.+|++.+++.++.+|+||+|+|+++++|+||++|+++|+.|++|||++||+|||+.+||+++|++||+++.+.+.+.+++
T Consensus 603 ~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~ 682 (1057)
T TIGR01652 603 TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITS 682 (1057)
T ss_pred hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888888877
Q ss_pred CCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH
Q 002339 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK 849 (934)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK 849 (934)
.+.++.... +..+..++....... .......+.+++++|++++.+++++++.+|.++...|+++||||++|+||
T Consensus 683 ~~~~~~~~~-----~~~i~~~~~~~~~~~-~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 683 ESLDATRSV-----EAAIKFGLEGTSEEF-NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred CchhhhHHH-----HHHHHHHHHHHHHhh-hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 654332111 111111111111111 01122456789999999999988888889999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhchhhhHHhhhheEE
Q 002339 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMVII 929 (934)
Q Consensus 850 ~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~Gr~~~~~i~~~i~~ 929 (934)
+++|+.+|+..|++|+|+|||+||++||++||||||+.|.|+.||+.+|||+|.+|++|.+|+++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999999844999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EeccC
Q 002339 930 KDFPT 934 (934)
Q Consensus 930 ~~~k~ 934 (934)
.|||+
T Consensus 837 ~~~kn 841 (1057)
T TIGR01652 837 FFYKN 841 (1057)
T ss_pred HHHHH
Confidence 99984
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-128 Score=1043.31 Aligned_cols=782 Identities=34% Similarity=0.558 Sum_probs=685.1
Q ss_pred CeEEEeCCCCCCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-CCCCCccccchhhHHHHH
Q 002339 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (934)
Q Consensus 36 ~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~ 114 (934)
.|++.+.... ..++.+|++|.+++.||++++|+|..|++||+.+.|+|||+.++.|++| +....+.+++.|++|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 4555555532 2357799999999999999999999999999999999999999999999 666677889999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 115 ~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
+++++++++|++|++.|+..|+.+++++.|+|.... |+++|+|||+|.++.|++||||+++|.+++.+|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999988875544 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCe--eeecCCCCeeecceEeecCCeEEEEEE
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRE--LYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~--~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||.+|.|-|.+.++.......+.+++ +..|.|+++++.|-|++++..+ ..+|+.+|.++.++.+...+ ++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEE
Confidence 999999999999998888877777766 8899999999999999999433 57899999999999998644 999999
Q ss_pred EeccchhhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhH
Q 002339 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (934)
Q Consensus 273 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (934)
|||.||+-++|...++.|-.-++..+|-+.+++++++++++++....-++- ..||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------SDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------CchH-------------------
Confidence 999999999999999999999999999999999999999988776654432 3788
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceE
Q 002339 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 353 ~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (934)
..+++++++++++||++|-+.+++++...+..+..|.+. .+..+|++++.|+||+|.|+++|||||||+|+|.
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 589999999999999999999999999999999888754 5679999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCch-HHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccc
Q 002339 433 FLKCSVAGTAYGVSPS-EVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (934)
Q Consensus 433 ~~~~~i~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (934)
|++++.|-..|+.+.. +.++......... ++ ..+..
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~-------------~~---------------------~~~~~--------- 461 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPG-------------RN---------------------KGKGA--------- 461 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCC-------------cc---------------------ccccc---------
Confidence 9999999998875432 2222211100000 00 00000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCc
Q 002339 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (934)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 591 (934)
......+......+...++++||+++|..++ ++...|++.||||.||+++.+..|..+..|+...+.++.... .
T Consensus 462 ~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 462 LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 0112234456788999999999999998765 468999999999999999999999999999999998876532 3
Q ss_pred eeEEEEeEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCC
Q 002339 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLD 670 (934)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~ 670 (934)
...|++|.+|||+|+.|||.+|||++ .+++..|.||||.+|......+ +++++....+|.+|+|||++|+|.++
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccC
Confidence 78999999999999999999999996 6899999999999997776643 47888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcHHHHHHHHHH-hhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 671 ~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~-~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
++||+.|...|+.|+-++ .||++.+..+-+ .+|+||+++|++|+||+||++|+.+++.||.||||+||+|||+.+||+
T Consensus 611 ~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ 689 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAI 689 (1051)
T ss_pred HHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhhee
Confidence 999999999999999999 899999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHH
Q 002339 750 NIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~ 829 (934)
.||++.+++..+..+..+......+........ -......+++|+|++++..++ ..+++|
T Consensus 690 ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~-------------------lR~k~~~aLvi~G~Sl~~cl~-yye~Ef 749 (1051)
T KOG0210|consen 690 CIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNN-------------------LRRKTDCALVIDGESLEFCLK-YYEDEF 749 (1051)
T ss_pred eeehhccceecCceEEEEEecCCchHHHHHHHH-------------------hhcCCCcEEEEcCchHHHHHH-HHHHHH
Confidence 999999999988887777655433211110000 012346789999999998876 677889
Q ss_pred HhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchh
Q 002339 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 830 ~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
.++.+.+.+++|||++|.||+++++.+|++.++.|++||||.||++||++||+|||+-|+||.||..||||.|.+|.++.
T Consensus 750 ~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~ 829 (1051)
T KOG0210|consen 750 IELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVS 829 (1051)
T ss_pred HHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhchhhhHHhhhheEEE
Q 002339 910 RLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 910 ~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+||++|||.+|+|.+++-+|.
T Consensus 830 rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 830 RLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred HHhhccccchHHHHHHHHHHH
Confidence 999999999999999876553
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-102 Score=948.81 Aligned_cols=646 Identities=30% Similarity=0.436 Sum_probs=530.5
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCCCCccccchhhHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALED 124 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~~~~~~~~~~~l~~v~~~~~~~~~~~~ 124 (934)
..+|+..||.|.+...+...++ +.++.||.+++++.++++++++++. +.+.. ...+.++++++++++..++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHH
Confidence 3467788999999977764443 8899999999999999999999874 22211 222234455666666677788
Q ss_pred HHHhhh---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCccee
Q 002339 125 WRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (934)
Q Consensus 125 ~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~ 201 (934)
++..++ ++.+.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~ 199 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVE 199 (917)
T ss_pred HHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchh
Confidence 777554 566677999999 89999999999999999999999999999999999775 5999999999999999
Q ss_pred eecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh
Q 002339 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (934)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 281 (934)
|.+..... .+.|. .++..|++|+||.+++.. +.|+|++||.+|+++
T Consensus 200 K~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G 245 (917)
T COG0474 200 KQALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFG 245 (917)
T ss_pred cccccccc----------------ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHH
Confidence 99875441 00110 046788999999988644 999999999999988
Q ss_pred hccCCCC---CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 282 QNATTSP---SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 282 ~~~~~~~---~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
++....+ ...+|+++.++++..+++++.++++++.++...+... . .| ...|++
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~---~~--------------------~~~~~~ 301 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N---GL--------------------LESFLT 301 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c---cH--------------------HHHHHH
Confidence 8776432 4679999999999999999999999988877632111 0 13 368999
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
++.+++.+||++||+.+++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|+++++
T Consensus 302 ~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~ 371 (917)
T COG0474 302 ALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYI 371 (917)
T ss_pred HHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEe
Confidence 9999999999999999999999999999 889999999999999999999999999999999999999998
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCC
Q 002339 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (934)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (934)
++. +.+.+. ....
T Consensus 372 ~~~--~~~~~~-----------------------------------------------------------------~~~~ 384 (917)
T COG0474 372 NGG--GKDIDD-----------------------------------------------------------------KDLK 384 (917)
T ss_pred CCC--cccccc-----------------------------------------------------------------cccc
Confidence 741 000000 0001
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEe
Q 002339 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (934)
Q Consensus 519 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (934)
......+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ . ... ....|+++
T Consensus 385 ~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~--~~~-------------~~~~~~~~ 443 (917)
T COG0474 385 DSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-D--LSG-------------LEVEYPIL 443 (917)
T ss_pred cchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-C--HHH-------------Hhhhccee
Confidence 12334478999999999988755 3 56689999999999999998854 1 000 24567889
Q ss_pred EecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhc------cccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHH
Q 002339 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK------NGRMYEEATTKLLNEYGEAGLRTLALAYKQLDES 672 (934)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~ 672 (934)
+.+||+|+|||||+|++..++++++|+|||||+|+++|+. ..++.++.+....++|+.+|||++++|||.++..
T Consensus 444 ~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~ 523 (917)
T COG0474 444 AEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRA 523 (917)
T ss_pred EEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9999999999999999987788999999999999999985 2334678889999999999999999999977654
Q ss_pred HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 002339 673 EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG 752 (934)
Q Consensus 673 e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia 752 (934)
+.. . .. +.+|+||+|+|+++|+||+|++++++|+.|++|||++||+|||+.+||++||
T Consensus 524 ~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa 581 (917)
T COG0474 524 EKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA 581 (917)
T ss_pred ccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH
Confidence 311 1 11 6789999999999999999999999999999999999999999999999999
Q ss_pred HHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhh
Q 002339 753 FACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832 (934)
Q Consensus 753 ~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~ 832 (934)
++||+..+... .++++|.+++...++++.+.+..
T Consensus 582 ~~~Gi~~~~~~---------------------------------------------~~vi~G~el~~l~~~el~~~~~~- 615 (917)
T COG0474 582 KECGIEAEAES---------------------------------------------ALVIDGAELDALSDEELAELVEE- 615 (917)
T ss_pred HHcCCCCCCCc---------------------------------------------eeEeehHHhhhcCHHHHHHHhhh-
Confidence 99998653210 46899999998888755554443
Q ss_pred hhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecCccc-hh
Q 002339 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQFRF-LE 909 (934)
Q Consensus 833 ~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~~~~-l~ 909 (934)
+. ||||++|+||.++|+.+|+ .|++|+|+|||.||+||||+|||||||+ |+|. |+++||+++.++++ ..
T Consensus 616 ---~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i 687 (917)
T COG0474 616 ---LS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATI 687 (917)
T ss_pred ---Cc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHH
Confidence 33 9999999999999999999 7999999999999999999999999996 5666 99999999999777 33
Q ss_pred hhHhhhchhhhHHhhhheEEEeccC
Q 002339 910 RLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 910 ~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
..+++|||++|.|+++++.|.|+++
T Consensus 688 ~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 688 VLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3449999999999999999998864
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-98 Score=832.31 Aligned_cols=692 Identities=23% Similarity=0.292 Sum_probs=533.4
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~ 126 (934)
..+|++.||.|++....-..++ +.+++||.++....+|++++++|+. .+|...+.+.++++++++..++++|+
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehh
Confidence 3467889999999977766654 9999999999999999999999984 33334444445566777788899999
Q ss_pred Hhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002339 127 RFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (934)
Q Consensus 127 r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~ 203 (934)
..|+.++++ +..|+|+ |+|+.+.+++++|||||||.|+-||.||||++|++..+ ..||||+|||||.|+.|.
T Consensus 102 aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 999876665 4889999 89999999999999999999999999999999999886 899999999999999997
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhc
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~ 283 (934)
........ +.+..+.....|+||.+..|+ +.|+|+.||.+|.++..
T Consensus 177 t~~v~~~~-------------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 177 TDAVPKDE-------------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKI 222 (972)
T ss_pred CccccCCC-------------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHH
Confidence 65433100 000111222345666666555 99999999999976543
Q ss_pred ---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH-hheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 002339 284 ---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (934)
Q Consensus 284 ---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (934)
....+..++|+|++++.+...+.-++.++|+...++ ...++.-.....|+ ...+..|..+
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~Ia 286 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFKIA 286 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhhHH
Confidence 335566689999999999999985555555544443 22111000001222 3446788889
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEc
Q 002339 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (934)
Q Consensus 360 l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~ 439 (934)
+.+.+.+||.+||+.+++...++..+| ++++++||++..+|+||.+++||+|||||||+|+|.+.++++.
T Consensus 287 VsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~ 356 (972)
T KOG0202|consen 287 VSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIP 356 (972)
T ss_pred HHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEec
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999987
Q ss_pred CeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccccc--CCCCC
Q 002339 440 GTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG--NWLKE 517 (934)
Q Consensus 440 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 517 (934)
+..++.. ++ + ...-.+++..+....+. .....
T Consensus 357 ~~~~~~~-~~-------------------------------f--------------~~tg~ty~~~g~v~~~~~~~~~~~ 390 (972)
T KOG0202|consen 357 DGGTATV-DE-------------------------------F--------------NPTGTTYSPEGEVFKDGLYEKDKA 390 (972)
T ss_pred ccccccc-cc-------------------------------c--------------ccCCceeCCCCceEecCccccccc
Confidence 6654332 00 0 00000011111111111 11123
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEE
Q 002339 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (934)
Q Consensus 518 ~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (934)
...+.+.++..+.++||.+...+++. +.++ ..|.|.|.||..+|+++|+.-......+ . .+ ...+.+.....++.
T Consensus 391 ~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~-~~G~pTE~AL~vlaeKm~l~~~~~~~~s-~-~~-~~~c~~~~~~~~~~ 465 (972)
T KOG0202|consen 391 GDNDLLQELAEICALCNDATVEYNDA-DCYE-KVGEPTEGALIVLAEKMGLPGTRSTNLS-N-EE-ASACNRVYSRLFKK 465 (972)
T ss_pred cccHHHHHHHHHHHhhhhhhhhcCch-hhHH-hcCCchHHHHHHHHHHcCCCcchhhccc-c-cc-cccchhHHHHhhhh
Confidence 35567889999999999998887664 2222 2489999999999999998754411110 0 01 12233333456778
Q ss_pred eEecCCCCCCceEEEEEEcCCCc--EEEEEcccchhhhHhhhc-----------cccccHHHHHHHHHHHHhcCCeEEEE
Q 002339 598 LNLLDFTSKRKRMSVIVRDEDGQ--ILLLCKGADSIIFDRLSK-----------NGRMYEEATTKLLNEYGEAGLRTLAL 664 (934)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~~~Glr~l~~ 664 (934)
...+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+. -.+..++.+.+...+|+.+|||+|++
T Consensus 466 ~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLal 545 (972)
T KOG0202|consen 466 IAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLAL 545 (972)
T ss_pred eeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEE
Confidence 89999999999999999986654 899999999999999954 12236788899999999999999999
Q ss_pred EEEeCCH-H--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 665 AYKQLDE-S--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 665 A~k~l~~-~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
|+++.+. . +.+.|.. .+ +...|+||+|+|++|+.||+|++++++|+.|+++||+|.|+|
T Consensus 546 A~~~~~~~~~~~~~l~~~----------s~--------~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mIT 607 (972)
T KOG0202|consen 546 ASKDSPGQVPDDQDLNDT----------SN--------RATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMIT 607 (972)
T ss_pred EccCCcccChhhhhhccc----------cc--------ccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEc
Confidence 9998764 1 1111110 12 257899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+.+||.+||+++|+...+.++ ....++|.+++...
T Consensus 608 GD~~~TA~AI~r~iGi~~~~ed~-------------------------------------------~~~~~TG~efD~ls 644 (972)
T KOG0202|consen 608 GDNKETAEAIAREIGIFSEDEDV-------------------------------------------SSMALTGSEFDDLS 644 (972)
T ss_pred CCCHHHHHHHHHHhCCCcCCccc-------------------------------------------cccccchhhhhcCC
Confidence 99999999999999998654321 12367888888776
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCc
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASD 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD 899 (934)
.+++..... +..+|+|++|.+|.++|+.||+ .|++|+|.|||.||+|+|+.|||||||+ |++. ||+|||
T Consensus 645 ~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsD 715 (972)
T KOG0202|consen 645 DEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASD 715 (972)
T ss_pred HHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhh
Confidence 665554333 3459999999999999999998 8999999999999999999999999994 8888 999999
Q ss_pred EeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 900 ~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+||.+++| +..+ +.+||.+|.|++++|.|.+.
T Consensus 716 MVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lS 749 (972)
T KOG0202|consen 716 MVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLS 749 (972)
T ss_pred cEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHh
Confidence 99999888 6666 89999999999999999764
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.1e-95 Score=895.04 Aligned_cols=720 Identities=20% Similarity=0.222 Sum_probs=520.2
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~ 125 (934)
+..+|+++||+|.++.++...++ +.+++||.+|+.++++++++++++. ..|.. .+.++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~-~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIE-GGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHH-HHHHHhHHHHHHHHHHHHHH
Confidence 34568899999999988765543 8899999999999999999999984 34444 44466778889999999999
Q ss_pred HHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceee
Q 002339 126 RRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (934)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K 202 (934)
+..++...+. ..+++|+ |||++++|++++|+|||||.|++|+.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 9999865554 5789999 89999999999999999999999999999999999665 99999999999999999
Q ss_pred ecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh
Q 002339 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (934)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 282 (934)
.+...... .. +....+.....|+||.+..|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~-~~-----------~~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK-EE-----------DTPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc-cc-----------cCCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 00 000001112235555555555 9999999999997765
Q ss_pred ccCC---CC-----------------------------------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheee
Q 002339 283 NATT---SP-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI 324 (934)
Q Consensus 283 ~~~~---~~-----------------------------------~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~ 324 (934)
.... .. ..+||+|+++++++.+++++.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4431 10 0149999999999999988888888776654221
Q ss_pred cccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeee
Q 002339 325 NYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQAR 404 (934)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk 404 (934)
. .| ...+++++.+++.++|++||+.++++..+++.+| ++++++||
T Consensus 304 ~-----~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr 348 (1053)
T TIGR01523 304 D-----VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVR 348 (1053)
T ss_pred h-----hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEec
Confidence 0 01 1356678899999999999999999999999999 88999999
Q ss_pred cCccccccccceEEEecCCCceeecceEEEEEEEcCe-eccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchh
Q 002339 405 TSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483 (934)
Q Consensus 405 ~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (934)
+++++|+||++++||+|||||||+|+|+|+++++.+. .|....... +...+..+ -.....
T Consensus 349 ~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~--------~~~~~~g~-----------~~~~~~ 409 (1053)
T TIGR01523 349 KLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD--------AFNPNEGN-----------VSGIPR 409 (1053)
T ss_pred cchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC--------CCCCcccc-----------cccccc
Confidence 9999999999999999999999999999999998652 221100000 00000000 000000
Q ss_pred hhhcccCCCCCcccccCCCccccccccccCC-CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHH
Q 002339 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVA 562 (934)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~ 562 (934)
.. ...........+.+........+... ..........+++.+.++||++....++..+.. ...++|+|.||+.+
T Consensus 410 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~-~~~GdptE~ALl~~ 485 (1053)
T TIGR01523 410 FS---PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW-KAHGDPTEIAIHVF 485 (1053)
T ss_pred cc---cccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce-eeCcCccHHHHHHH
Confidence 00 00000000000000000000000000 000012346678899999999876543222221 13589999999999
Q ss_pred HHHCCcEEEeec---------C-CeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCC-cEEEEEcccchh
Q 002339 563 AREFGFEFYRRT---------Q-SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILLLCKGADSI 631 (934)
Q Consensus 563 a~~~g~~~~~~~---------~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~ 631 (934)
|.+.|+...... . ....+.... .++....|++++.+||||+|||||++++++++ .+++|+|||||.
T Consensus 486 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~ 562 (1053)
T TIGR01523 486 AKKFDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562 (1053)
T ss_pred HHHcCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHH
Confidence 999997531100 0 000000000 00013568999999999999999999997654 589999999999
Q ss_pred hhHhhhcc-----------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHH
Q 002339 632 IFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVS 700 (934)
Q Consensus 632 i~~~~~~~-----------~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~ 700 (934)
|+++|+.. +++.++.+.+.+++|+.+|+|||++|||.++.+++..+ .+.. .. .+|
T Consensus 563 il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~~-------- 628 (1053)
T TIGR01523 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LNR-------- 628 (1053)
T ss_pred HHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cch--------
Confidence 99999742 12245678888999999999999999999987554221 1100 00 012
Q ss_pred HhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHH
Q 002339 701 DMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780 (934)
Q Consensus 701 ~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~ 780 (934)
+.+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+..||.++|++|||++.+.. ... .
T Consensus 629 ~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~~~-~---------- 695 (1053)
T TIGR01523 629 ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--HDR-D---------- 695 (1053)
T ss_pred hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--ccc-c----------
Confidence 357899999999999999999999999999999999999999999999999999999864311 000 0
Q ss_pred HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC
Q 002339 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT 860 (934)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~ 860 (934)
......+++|.+++.+.++++.+... ...||||++|+||.++|+.+|+ .
T Consensus 696 ------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~-~ 744 (1053)
T TIGR01523 696 ------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHR-R 744 (1053)
T ss_pred ------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHh-c
Confidence 00113689999998776655543322 3459999999999999999998 7
Q ss_pred CCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
|++|+|+|||.||++||+.|||||||+ |++. |+++||++|.+ |+.+.++ +.|||++|+|+++++.|.|+++
T Consensus 745 g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~n 819 (1053)
T TIGR01523 745 KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAEN 819 (1053)
T ss_pred CCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999994 6777 99999999998 5558888 8999999999999999998764
No 8
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.4e-94 Score=893.27 Aligned_cols=682 Identities=20% Similarity=0.253 Sum_probs=528.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CC-------CCCccccchhhHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~v~~~~~ 117 (934)
..+|+.+||+|.++.++.+.++ +.|++||.+|+++.++++++++++. +. ....+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 4567889999999987766554 8899999999999999999997653 10 0122334456778888999
Q ss_pred HHHHHHHHHHhhhhhhhcc---ceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCC
Q 002339 118 AKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (934)
Q Consensus 118 ~~~~~~~~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~Lt 194 (934)
+..+++++++++.++.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 9999999999999887765 689999 89999999999999999999999999999999999543 899999999
Q ss_pred CCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEe
Q 002339 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (934)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 274 (934)
|||.|+.|.+.... ..|++.+|++++||.+.. |++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEEc
Confidence 99999999875321 113455666666666653 5699999999
Q ss_pred ccchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchh
Q 002339 275 GHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (934)
Q Consensus 275 G~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (934)
|.+|+++++.. ..+.+++|+++.++++...+.++.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW------------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH-------------------
Confidence 99998877665 5566789999999999999988888777766665432210 12
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecce
Q 002339 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (934)
Q Consensus 352 ~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m 431 (934)
...+.+++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 292 -~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m 360 (997)
T TIGR01106 292 -LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 360 (997)
T ss_pred -HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCce
Confidence 2456677888888999999999999999999998 78899999999999999999999999999999999
Q ss_pred EEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccc
Q 002339 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (934)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (934)
+|.++++++..|..+.... ..+.
T Consensus 361 ~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~--------- 383 (997)
T TIGR01106 361 TVAHMWFDNQIHEADTTED------------------------------------------------QSGV--------- 383 (997)
T ss_pred EEEEEEECCeEEecCCccC------------------------------------------------CCCc---------
Confidence 9999998877654221000 0000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
...........++.++++||++....+.... .-.+..++|+|.||++++...+.....
T Consensus 384 ---~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~----------------- 443 (997)
T TIGR01106 384 ---SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME----------------- 443 (997)
T ss_pred ---cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-----------------
Confidence 0001123445788899999988765332110 012446899999999999865432110
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcC---CCcEEEEEcccchhhhHhhhc---cc------cccHHHHHHHHHHHHhc
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---NG------RMYEEATTKLLNEYGEA 657 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---~~------~~~~~~~~~~~~~~~~~ 657 (934)
....|+.++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+. ++ ++.++.+.+.+++|+.+
T Consensus 444 -~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~ 522 (997)
T TIGR01106 444 -MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGL 522 (997)
T ss_pred -HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhc
Confidence 135678899999999999999988642 256899999999999999974 11 23456688889999999
Q ss_pred CCeEEEEEEEeCCHHHHHH-HHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCe
Q 002339 658 GLRTLALAYKQLDESEYSA-WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (934)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~-~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIk 736 (934)
|+||+++|||.++.++++. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+
T Consensus 523 GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~ 586 (997)
T TIGR01106 523 GERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIK 586 (997)
T ss_pred CCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCe
Confidence 9999999999998655432 211 110 01344899999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChh
Q 002339 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (934)
Q Consensus 737 v~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 816 (934)
++|+|||++.||.++|+++|+++++... .++ +...+...... ........++++|.+
T Consensus 587 v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~~~------------i~~~~~~~~~~----~~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 587 VIMVTGDHPITAKAIAKGVGIISEGNET-------VED------------IAARLNIPVSQ----VNPRDAKACVVHGSD 643 (997)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCccc-------hhh------------hhhhccccccc----cccccccceEEEhHH
Confidence 9999999999999999999998754321 000 00000000000 001112247999999
Q ss_pred hhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhH
Q 002339 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQA 894 (934)
Q Consensus 817 l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a 894 (934)
++.+.++++.+ ....+..+||||++|+||.++|+.+|+ .|++|+|+|||.||++||+.|||||||+ |+|. |
T Consensus 644 l~~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--a 716 (997)
T TIGR01106 644 LKDMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--S 716 (997)
T ss_pred hhhCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--H
Confidence 98877655443 334445679999999999999999998 8999999999999999999999999995 6788 9
Q ss_pred HHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEeccC
Q 002339 895 VMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFPT 934 (934)
Q Consensus 895 ~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k~ 934 (934)
+++||++|.++++ +.++ +.|||++|.|+++++.|.|+++
T Consensus 717 k~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~n 757 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSN 757 (997)
T ss_pred HHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999555 8888 9999999999999999998763
No 9
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-94 Score=800.34 Aligned_cols=654 Identities=22% Similarity=0.308 Sum_probs=518.7
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc-----CCCCCccccchhhH---HHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-----LSPFSPVSMLLPLA---IVVGVSMAK 119 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~-----~~~~~~~~~~~~l~---~v~~~~~~~ 119 (934)
..|+.-||+|.++..+...|+ .++|+.|+...-+++.+++++++.. ....+|+....+++ ++++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 467889999999999887654 7899999999999999999999864 22446776544333 334445554
Q ss_pred HHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcc
Q 002339 120 EALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (934)
Q Consensus 120 ~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~ 199 (934)
++-++.+-.+.++...+.++.|+ |||+.++|+..||+||||+.|+.||.+||||+++++++ +.||||+|||||++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 54444444444555567889999 89999999999999999999999999999999999765 99999999999999
Q ss_pred eeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchh
Q 002339 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (934)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 279 (934)
+.|.+... .+.++||.+++|. +.++|+.+|.+|.
T Consensus 278 v~k~~~~d-------------------------PfLlSGTkv~eGs---------------------gkMlVTaVGmnt~ 311 (1034)
T KOG0204|consen 278 VQKSLDKD-------------------------PFLLSGTKVMEGS---------------------GKMLVTAVGMNTQ 311 (1034)
T ss_pred eeccCCCC-------------------------CeEeecceeecCc---------------------ceEEEEEeeecch
Confidence 99976432 3678999999888 9999999999996
Q ss_pred h---hhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc--cC-CCCCchhHH
Q 002339 280 V---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY--FN-PGKPLVPGL 353 (934)
Q Consensus 280 i---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 353 (934)
. |.........+||+|-++++++..+..+.++++++++++..+..- ......+.. .. .......++
T Consensus 312 wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~--------~~~~~~~~~~~~~~~~~~~~~~v 383 (1034)
T KOG0204|consen 312 WGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFF--------IGKTKIEGGTGTTWSDEYIQEFV 383 (1034)
T ss_pred HhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------heeeecCCCCCccccHHHHHHHH
Confidence 5 444455565789999999999999988888888777666544211 000000000 00 011123344
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEE
Q 002339 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (934)
Q Consensus 354 ~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (934)
..|..++.+++.++|.+||+++++...++..+| .+.+.++|.++++|++|..+.||+|||||||.|.|++
T Consensus 384 ~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 384 KFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred HHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 566667778999999999999999999999998 4556789999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
.+.++++..|..+... .
T Consensus 454 V~~~~~~~~~k~~~~~-~-------------------------------------------------------------- 470 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPK-S-------------------------------------------------------------- 470 (1034)
T ss_pred EeeeeccccccccCcc-c--------------------------------------------------------------
Confidence 9999988876532211 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
..-.+.....++.+++...+.....++..+...-+.+||.|.||+.++..+|..+.. .+.
T Consensus 471 --~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~ 530 (1034)
T KOG0204|consen 471 --SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRP 530 (1034)
T ss_pred --ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcc
Confidence 001112233455556555544444444444445567999999999999999987755 246
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc----------ccccHHHHHHHHHHHHhcCCeEEE
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----------GRMYEEATTKLLNEYGEAGLRTLA 663 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~Glr~l~ 663 (934)
..++++++||+|.||||+++++.+++..++|+|||.|.|+..|+.- ++.....+++.++.||.+||||+|
T Consensus 531 e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~ 610 (1034)
T KOG0204|consen 531 EEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTIC 610 (1034)
T ss_pred hhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheee
Confidence 6788999999999999999999888773499999999999999861 123455788999999999999999
Q ss_pred EEEEeCCHH--HHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 664 LAYKQLDES--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 664 ~A~k~l~~~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
+|||+.... +..+|.. .+..+.+|+++|++||+||+||||+++|+.|+.|||+|.|+|
T Consensus 611 lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVT 670 (1034)
T KOG0204|consen 611 LAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVT 670 (1034)
T ss_pred EEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEe
Confidence 999995433 1122211 134568999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..||++||.+|||++++... +++.|+++..+-
T Consensus 671 GDNI~TAkAIA~eCGILt~~~d~---------------------------------------------~~lEG~eFr~~s 705 (1034)
T KOG0204|consen 671 GDNINTAKAIARECGILTPGGDF---------------------------------------------LALEGKEFRELS 705 (1034)
T ss_pred CCcHHHHHHHHHHcccccCCCcc---------------------------------------------ceecchhhhhcC
Confidence 99999999999999999876542 366777777666
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE--cccchhhHHHhCc
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQAVMASD 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam--~~~e~~~a~~~AD 899 (934)
+++..+...++. |.||.+|.+|..+|+.+++ .|++|++.|||.||.|+|++||||.|| +|+|. ||++||
T Consensus 706 ~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSD 776 (1034)
T KOG0204|consen 706 QEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASD 776 (1034)
T ss_pred HHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCC
Confidence 666666555554 9999999999999999998 899999999999999999999999988 58998 999999
Q ss_pred EeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 900 ~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+||++++| +.+. +.|||..|.+|+|+++|.+
T Consensus 777 IIi~DDNFssIVk~-v~WGR~VY~nIqKFiQFQL 809 (1034)
T KOG0204|consen 777 IIILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQL 809 (1034)
T ss_pred eEEEcCchHHHHHH-HHhhhHHHHHHHHhheeEE
Confidence 99999888 7888 8999999999999999986
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.2e-93 Score=880.87 Aligned_cols=648 Identities=22% Similarity=0.296 Sum_probs=497.8
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccC--CC--------CCccccch---hhHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--SP--------FSPVSMLL---PLAIV 112 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~--~~--------~~~~~~~~---~l~~v 112 (934)
+..+|+++||+|.++.++...++ +.+++||+++++++|+++++++++.. .+ ..|+..++ +++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 34568889999999999886554 78999999999999999999998731 11 13444433 23333
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeec
Q 002339 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~ 192 (934)
++++++.++.++...++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 444555555555555554444556789999 8999999999999999999999999999999999932 59999999
Q ss_pred CCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002339 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (934)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (934)
|||||.|+.|.+++.. ..|+||.+.+|. +.|+|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999865321 347777777766 999999
Q ss_pred Eeccchhhhh---ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCc
Q 002339 273 FTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPL 349 (934)
Q Consensus 273 ~tG~~Tki~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (934)
+||.+|.+++ +....+ +++|+++.++++...+..+.++++++.++++.+..... ..|. +.. .+....
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~--~~~~---~~~----~~~~~~ 320 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFR--IIRG---DGR----DTEEDA 320 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccc---ccc----ccchhh
Confidence 9999995544 444444 46799999999999998887777776665543210000 0000 000 000001
Q ss_pred hhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeec
Q 002339 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (934)
Q Consensus 350 ~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (934)
..+...+.+++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n 390 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQN 390 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeec
Confidence 2334578889999999999999999999999999888 889999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccc
Q 002339 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (934)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (934)
+|.+.+++..+..|..+..
T Consensus 391 ~m~v~~~~~~~~~~~~~~~------------------------------------------------------------- 409 (941)
T TIGR01517 391 VMSVVQGYIGEQRFNVRDV------------------------------------------------------------- 409 (941)
T ss_pred eEEEEEEEEecceEecCcc-------------------------------------------------------------
Confidence 9999999876543321100
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCC
Q 002339 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (934)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (934)
.. .......+++...+.||+..+...++ ....+..++|+|.||++++++.|.....
T Consensus 410 ~~------~~~~~~~~~l~~~~~~~s~~~~~~~~-~~~~~~~g~p~e~All~~~~~~~~~~~~----------------- 465 (941)
T TIGR01517 410 LR------NVPKHVRNILVEGISLNSSSEEVVDR-GGKRAFIGSKTECALLGFLLLLGRDYQE----------------- 465 (941)
T ss_pred cc------cCCHHHHHHHHHHHHhCCCCccccCC-CCccccCCCccHHHHHHHHHHcCCCHHH-----------------
Confidence 00 00112334455445555543322111 1112456899999999999887643211
Q ss_pred CceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc----cc-----ccHHHHHHHHHHHHhcCCe
Q 002339 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----GR-----MYEEATTKLLNEYGEAGLR 660 (934)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~~~~~~~~Glr 660 (934)
....+++++.+||+|+||||+++++.+++++++|+|||||.|+++|+.. +. +..+.+.+.+++++.+|+|
T Consensus 466 -~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~R 544 (941)
T TIGR01517 466 -VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALR 544 (941)
T ss_pred -HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCE
Confidence 1235678889999999999999999877889999999999999999751 11 1345678889999999999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEE
Q 002339 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (934)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ml 740 (934)
|+++|||.++.+++..| +..|+||+|+|+++++|++|++++++|+.|+++||++||+
T Consensus 545 vl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~mi 601 (941)
T TIGR01517 545 TICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMV 601 (941)
T ss_pred EEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEE
Confidence 99999999876543221 2347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHh
Q 002339 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 741 TGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
|||+..||.++|++|||.+++. .+++|+++...
T Consensus 602 TGD~~~tA~~iA~~~GI~~~~~-----------------------------------------------~vi~G~~~~~l 634 (941)
T TIGR01517 602 TGDNIDTAKAIARNCGILTFGG-----------------------------------------------LAMEGKEFRRL 634 (941)
T ss_pred CCCChHHHHHHHHHcCCCCCCc-----------------------------------------------eEeeHHHhhhC
Confidence 9999999999999999986432 25677777665
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhC
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMAS 898 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~A 898 (934)
.++++...+. +..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++|
T Consensus 635 ~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aA 705 (941)
T TIGR01517 635 VYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEAS 705 (941)
T ss_pred CHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhC
Confidence 5555444332 3459999999999999999998 8999999999999999999999999995 6777 99999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
|++|+++++ +.++ +.|||++|.|+++++.|.|++
T Consensus 706 DivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~ 741 (941)
T TIGR01517 706 DIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTV 741 (941)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 999996555 8888 799999999999999998764
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-92 Score=868.27 Aligned_cols=675 Identities=23% Similarity=0.264 Sum_probs=509.8
Q ss_pred HHHHHhhHHHHHHHHHHHHhccc-CCC------CCccccchhhHHHHHHHHHHHHHHHHHHhhhhhhhc---cceEEEEe
Q 002339 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (934)
Q Consensus 74 l~~qf~~~~~~~~l~~~il~~~~-~~~------~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n---~~~~~V~~ 143 (934)
+++||++|++++++++++++++. ..+ ..|+..++ ++++++++++...+++++..++.+.+. +.+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFV-ILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999985 221 24444444 446677788889999999988766554 5789999
Q ss_pred CCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceE
Q 002339 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (934)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~ 223 (934)
|||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+.....
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------- 140 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------- 140 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------
Confidence 89999999999999999999999999999999999553 999999999999999998753210
Q ss_pred EEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh---ccCCCCCccchHHHHHHH
Q 002339 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (934)
Q Consensus 224 i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~~~ 300 (934)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +....+.+++|+|+++++
T Consensus 141 --------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 141 --------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00113455677888888775 679999999999998876 555677788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhee-ecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHH
Q 002339 301 IIFILFAILVLISLISSIGFAVK-INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (934)
Q Consensus 301 ~~~~~~~~~iil~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~ 379 (934)
++..++++.++++++.++++..+ ........|+ ...+..+..++.+++.+||++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99999888877777766554321 1000000111 122345667788999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhh
Q 002339 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (934)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (934)
.+++.+| +++++++|+++.+|+||++++||||||||||+|+|+|.+++..+..+.... .
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~---------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E---------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e----------
Confidence 9999999 788999999999999999999999999999999999999987654321000 0
Q ss_pred hchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeec
Q 002339 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539 (934)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~ 539 (934)
....+ ..+...+....+..............++.++++||++...
T Consensus 323 ---------------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~ 367 (917)
T TIGR01116 323 ---------------------FCVTG--------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367 (917)
T ss_pred ---------------------EEecC--------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeee
Confidence 00000 0000000000000000011234566788999999998765
Q ss_pred ccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCC
Q 002339 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG 619 (934)
Q Consensus 540 ~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 619 (934)
.++..+... ..++|+|.||++++++.|+....+..........+.. ......|++++.+||||+|||||++++. ++
T Consensus 368 ~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~ 443 (917)
T TIGR01116 368 FNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-ST 443 (917)
T ss_pred ccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CC
Confidence 433222221 2489999999999999998776544333222111100 0013568899999999999999999986 46
Q ss_pred cEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHh-cCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Q 002339 620 QILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGE-AGLRTLALAYKQLDESEYSAWNSEFQKAKSSI 688 (934)
Q Consensus 620 ~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~-~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~ 688 (934)
++++|+|||||.|+++|+.. + .+..+.+.+++++|+. +|+||+++|||.++.++.. +..
T Consensus 444 ~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~~--------- 513 (917)
T TIGR01116 444 GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DLL--------- 513 (917)
T ss_pred cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-ccc---------
Confidence 78999999999999999741 1 2245678888999999 9999999999998764321 000
Q ss_pred hhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEc
Q 002339 689 GADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT 768 (934)
Q Consensus 689 ~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~ 768 (934)
.+. ...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 514 -~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~--- 584 (917)
T TIGR01116 514 -SDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT--- 584 (917)
T ss_pred -ccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc---
Confidence 010 12256789999999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhh
Q 002339 769 ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848 (934)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~q 848 (934)
...++|.++..+.+++... ..++..+|||++|+|
T Consensus 585 ----------------------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~ 618 (917)
T TIGR01116 585 ----------------------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSH 618 (917)
T ss_pred ----------------------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHH
Confidence 1245566655443333221 123466999999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhh
Q 002339 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQ 925 (934)
Q Consensus 849 K~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~ 925 (934)
|.++|+.+++ .|++|+|+|||.||++||+.||||||| +|++. ++++||+++.+ |+.+.++ +.|||++|.|+++
T Consensus 619 K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k 694 (917)
T TIGR01116 619 KSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999997 899999999999999999999999999 56676 89999999999 6668888 7999999999999
Q ss_pred heEEEeccC
Q 002339 926 MVIIKDFPT 934 (934)
Q Consensus 926 ~i~~~~~k~ 934 (934)
++.|.|+++
T Consensus 695 ~i~~~l~~n 703 (917)
T TIGR01116 695 FIRYMISSN 703 (917)
T ss_pred HHHHHHhcc
Confidence 999999874
No 12
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=7.6e-92 Score=874.76 Aligned_cols=695 Identities=22% Similarity=0.278 Sum_probs=508.7
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r 127 (934)
..++..||+|.+..++.++| +.++++|..|++++++++++++++ ..++.+.+.++++++++.+...+++++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999887665 889999999999999998888876 3444444445566667777788888877
Q ss_pred hhhhhhhc--cceEEEEeCCCeEEEeecccCccCcEEEec--cCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeee
Q 002339 128 FMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (934)
Q Consensus 128 ~k~~~~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~--~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~ 203 (934)
.++.+.+. ++.++|+ |||+|++|++++|+|||||.|+ +|+.+||||+|++ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77766654 4689999 8999999999999999999999 9999999999998 77999999999999999998
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec------CCeEEEEEEEeccc
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN------TAHVYGSVIFTGHD 277 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n------t~~~~gvVv~tG~~ 277 (934)
+.+.... ..+ ..+ ....+.+|++|.||.+.. ++.+.|+|++||.+
T Consensus 292 ~~~~~~~--~~~----------------~~~-----------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 292 PIPDNGD--DDE----------------DLF-----------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred cCCcccc--ccc----------------ccc-----------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 8643100 000 000 011244567777776653 46799999999999
Q ss_pred hhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHH
Q 002339 278 SKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (934)
Q Consensus 278 Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (934)
|..++.. ...+...+++++.+.+++.+++++.++.+++.++.. +... ..| ..
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~~~----~~~--------------------~~ 397 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IKDG----RPL--------------------GK 397 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcC----CcH--------------------HH
Confidence 9655544 345556788999988887766555544333322211 1100 112 36
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEE
Q 002339 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (934)
Q Consensus 355 ~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 434 (934)
.+++++.+++.++|++||++++++..++..++ ++++++|+++..+|.||+++++|||||||||+|+|.|.
T Consensus 398 ~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~ 467 (1054)
T TIGR01657 398 IILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467 (1054)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEE
Confidence 78889999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred EEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCC
Q 002339 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (934)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (934)
+++..+...... . ..
T Consensus 468 ~v~~~~~~~~~~--~----------------------------------------------------------~~----- 482 (1054)
T TIGR01657 468 GVQGLSGNQEFL--K----------------------------------------------------------IV----- 482 (1054)
T ss_pred eEecccCccccc--c----------------------------------------------------------cc-----
Confidence 987543210000 0 00
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEe-ecCCe-----EEEEecCCCCC
Q 002339 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQSS-----VFIRERYPPKG 588 (934)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~-~~~~~-----~~i~~~~~~~~ 588 (934)
..........+..++++||++....+ ...++|.|.|+++++ |+.+.. ..... ..+... +
T Consensus 483 -~~~~~~~~~~~~~~~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~----~ 547 (1054)
T TIGR01657 483 -TEDSSLKPSITHKALATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTD----D 547 (1054)
T ss_pred -ccccccCchHHHHHHHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceecc----C
Confidence 00000112246678999999865421 235999999999975 555433 11000 001100 0
Q ss_pred CCceeEEEEeEecCCCCCCceEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002339 589 QPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667 (934)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k 667 (934)
....+++++.+||+|++|||||+++.++ +++++|+|||||.|+++|++.. .++.+.+.+++|+.+|+|||++|||
T Consensus 548 --~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLalA~k 623 (1054)
T TIGR01657 548 --PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLALAYK 623 (1054)
T ss_pred --CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEEEEEe
Confidence 1357999999999999999999999754 5689999999999999999643 6788899999999999999999999
Q ss_pred eCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++++.++.++.+ .+| +.+|+||+|+|+++|+|++|++++++|+.|+++||+++|+|||+..|
T Consensus 624 ~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 624 ELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred ecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 997543322211 133 56789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcccCCceEEEEcCCCchhH-HHHHHHHHHHh-----HHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 748 AINIGFACSLLRQGMKQICITALNSDSV-GKAAKEAVKDN-----ILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 748 a~~ia~~~gi~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
|.++|++|||++++..++..+....+.. ...+.....++ .....................+.++++|+.++.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999987655554432110000 00000000000 00000000000000011223467899999998764
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEe
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFS 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~i 901 (934)
+. ..+.+.++...+ .||||++|+||.++|+.+|+ .|+.|+|+|||+||++||++|||||||++.| |..+|||+
T Consensus 766 ~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~ 838 (1054)
T TIGR01657 766 AH-SPELLLRLLSHT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFT 838 (1054)
T ss_pred Hh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccc
Confidence 32 223344444443 49999999999999999998 8999999999999999999999999998776 56899999
Q ss_pred ecCccc--hhhhHhhhchhhhHHhhhheEEE
Q 002339 902 IAQFRF--LERLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 902 i~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+.++++ +.++ +.+||.+|.++.+++.|.
T Consensus 839 l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~ 868 (1054)
T TIGR01657 839 SKLASISCVPNV-IREGRCALVTSFQMFKYM 868 (1054)
T ss_pred cCCCcHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 987555 8888 889999999998876654
No 13
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5.4e-89 Score=829.65 Aligned_cols=611 Identities=20% Similarity=0.254 Sum_probs=483.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~ 126 (934)
...|+++||+|.++.++.+.++ +.|++||.+|++++++++++++++. ..|. ..+.++++++++.+.+++++++
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~-~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLF-AAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999887654 8899999999999999999999873 3343 4444567778888889999999
Q ss_pred Hhhhhhhh---ccceEEEEeCC------CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCC
Q 002339 127 RFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (934)
Q Consensus 127 r~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs 197 (934)
..++.+.+ ...+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 88775444 45789999 77 789999999999999999999999999999999443 799999999999
Q ss_pred cceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccc
Q 002339 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHD 277 (934)
Q Consensus 198 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 277 (934)
.|+.|.+++..... .+..+.....|+||.+.+|. +.++|++||.+
T Consensus 221 ~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGAN 265 (902)
T ss_pred Cceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEeccc
Confidence 99999887532000 00001112345555555555 99999999999
Q ss_pred hhhhhc---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHH
Q 002339 278 SKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (934)
Q Consensus 278 Tki~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (934)
|.+++. ......+++|+++.+++++.++..+.++++.+.++++.+... .| ..
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~--------------------~~ 320 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW--------------------WE 320 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------HH
Confidence 976554 445667789999999999998888887777766555332110 12 35
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEE
Q 002339 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (934)
Q Consensus 355 ~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 434 (934)
.+..++.+++.+||++||++++++...++.+| +++++++|+++.+|.||++|+||||||||||+|+|.+.
T Consensus 321 ~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~ 390 (902)
T PRK10517 321 AALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLE 390 (902)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEE
Confidence 77888999999999999999999999999888 88999999999999999999999999999999999998
Q ss_pred EEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCC
Q 002339 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (934)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (934)
++.. ..+..
T Consensus 391 ~~~~---~~~~~-------------------------------------------------------------------- 399 (902)
T PRK10517 391 NHTD---ISGKT-------------------------------------------------------------------- 399 (902)
T ss_pred EEec---CCCCC--------------------------------------------------------------------
Confidence 7631 00000
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeE
Q 002339 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594 (934)
Q Consensus 515 ~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~ 594 (934)
..+++...++|.... . ..+||.|.|++.++...+.. .....
T Consensus 400 --------~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~ 440 (902)
T PRK10517 400 --------SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASR 440 (902)
T ss_pred --------HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhc
Confidence 012333334433221 0 14799999999998653200 01345
Q ss_pred EEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---c------cccHHHHHHHHHHHHhcCCeEEEEE
Q 002339 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLALA 665 (934)
Q Consensus 595 ~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~Glr~l~~A 665 (934)
|+.++.+||||+||||+++++..++.+.+++|||+|.|+++|+.. + ++..+.+.+..++++.+|+|++++|
T Consensus 441 ~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA 520 (902)
T PRK10517 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVA 520 (902)
T ss_pred CceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 777889999999999999998877888999999999999999751 1 1234567777889999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 666 YKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 666 ~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
||+++.++. .+ + ...|+|++|+|+++|+||+||+++++|++|+++||+|+|+|||+.
T Consensus 521 ~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (902)
T PRK10517 521 TKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSE 577 (902)
T ss_pred EecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 998865321 00 0 113689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHH
Q 002339 746 ETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDM 825 (934)
Q Consensus 746 ~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~ 825 (934)
.||.++|+++||... . +++|.+++...++++
T Consensus 578 ~tA~~IA~~lGI~~~--~-----------------------------------------------v~~G~el~~l~~~el 608 (902)
T PRK10517 578 LVAAKVCHEVGLDAG--E-----------------------------------------------VLIGSDIETLSDDEL 608 (902)
T ss_pred HHHHHHHHHcCCCcc--C-----------------------------------------------ceeHHHHHhCCHHHH
Confidence 999999999999421 1 456666665544444
Q ss_pred HHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecC
Q 002339 826 KHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~ 904 (934)
...... ..+|+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++||++|++
T Consensus 609 ~~~~~~------~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLld 679 (902)
T PRK10517 609 ANLAER------TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLE 679 (902)
T ss_pred HHHHhh------CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEec
Confidence 433322 239999999999999999998 8999999999999999999999999994 6776 99999999998
Q ss_pred ccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 905 FRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 905 ~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+++ +..+ +.+||.+|.|+++++.|.+
T Consensus 680 d~~~~I~~a-i~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 680 KSLMVLEEG-VIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred CChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 776 7777 8999999999999998765
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=8.9e-88 Score=826.05 Aligned_cols=639 Identities=20% Similarity=0.239 Sum_probs=496.0
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHH-hhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf-~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~ 124 (934)
+.++|+++||+|.+..++.+.++ +.+++|| .+|++++++++++++++. ..|...++ +++++++.++..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~-i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVS-ITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHH-HHhHHHHHHHHHHHHH
Confidence 34567889999999988765543 8899999 899999999999999874 34444443 4455566677888999
Q ss_pred HHHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCccee
Q 002339 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (934)
Q Consensus 125 ~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~ 201 (934)
++..++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 98888776654 5789999 89999999999999999999999999999999999443 8999999999999999
Q ss_pred eecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh
Q 002339 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (934)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 281 (934)
|.+++..... ..+..+.....|+||.+.+|. +.++|++||.+|.++
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986532100 000112222346666666555 999999999999766
Q ss_pred hc---cCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 282 QN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 282 ~~---~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
+. .......++|+++.++++..++.++.++++++.+++..+ .. ..| ...+..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~--------------------~~~~~~ 277 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG----KDW--------------------LEMFTI 277 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc----CCH--------------------HHHHHH
Confidence 54 445566689999999999998877665555444433211 10 012 357778
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
++.+++.+|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|.+.+++.
T Consensus 278 ~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~ 347 (884)
T TIGR01522 278 SVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWT 347 (884)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEe
Confidence 8899999999999999999999999988 889999999999999999999999999999999999999987
Q ss_pred cCeeccC-CchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCC
Q 002339 439 AGTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (934)
Q Consensus 439 ~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (934)
.+..+.. .... .+ ....+..++. ....
T Consensus 348 ~~~~~~~~~~~~------------~~----------------------------------~~~~~~~~~~------~~~~ 375 (884)
T TIGR01522 348 SDGLHTMLNAVS------------LN----------------------------------QFGEVIVDGD------VLHG 375 (884)
T ss_pred cCceEeeccCCc------------cC----------------------------------CCCccccccc------cccc
Confidence 5432210 0000 00 0000000000 0001
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEE
Q 002339 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (934)
Q Consensus 518 ~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (934)
..+..+.+++.+.++||+......+ + ...++|.|.||+++++..|+.. ....|+.
T Consensus 376 ~~~~~~~~~l~~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~--------------------~~~~~~~ 430 (884)
T TIGR01522 376 FYTVAVSRILEAGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDD--------------------LRETYIR 430 (884)
T ss_pred ccCHHHHHHHHHHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHh--------------------HHhhCcE
Confidence 1223466788889999988654321 1 1237999999999999877531 1245778
Q ss_pred eEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 598 LNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
++.+||+|.||||+++++.+ ++++++|+|||||.|+.+|+.. + ++.++.+.+.+++++.+|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 89999999999999999874 5778999999999999999741 1 12345677888999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
|.+ +.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..
T Consensus 511 ~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~ 556 (884)
T TIGR01522 511 GPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE 556 (884)
T ss_pred EcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 865 2589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHH
Q 002339 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (934)
Q Consensus 747 ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~ 826 (934)
||.++|+++||...... +++|.+++...++++.
T Consensus 557 tA~~ia~~~Gi~~~~~~-----------------------------------------------~v~g~~l~~~~~~~l~ 589 (884)
T TIGR01522 557 TAVSIARRLGMPSKTSQ-----------------------------------------------SVSGEKLDAMDDQQLS 589 (884)
T ss_pred HHHHHHHHcCCCCCCCc-----------------------------------------------eeEhHHhHhCCHHHHH
Confidence 99999999999764322 3456555544444443
Q ss_pred HHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccchhhHHHhCcEeecC
Q 002339 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 827 ~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~~~a~~~AD~ii~~ 904 (934)
+.+. +..+|||++|+||..+|+.+|+ .|+.|+|+|||.||++||+.|||||+|+ |++. ++++||+++.+
T Consensus 590 ~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~d 660 (884)
T TIGR01522 590 QIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTD 660 (884)
T ss_pred HHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcC
Confidence 3322 3459999999999999999998 8999999999999999999999999994 4565 88999999988
Q ss_pred ccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 905 FRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 905 ~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+++ +..+ +.+||.+|.|+++++.|.+..
T Consensus 661 d~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ 690 (884)
T TIGR01522 661 DDFATILSA-IEEGKGIFNNIKNFITFQLST 690 (884)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Confidence 555 7877 999999999999999998765
No 15
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=9.1e-88 Score=820.52 Aligned_cols=627 Identities=20% Similarity=0.243 Sum_probs=480.5
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--CCC------CCccccchhhHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP------FSPVSMLLPLAIVVGVSM 117 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~~~------~~~~~~~~~l~~v~~~~~ 117 (934)
+...|+++||+|.++.++...++ +.+++||.+|+.+.++++++++++. +.+ ..|.. .+.++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~-~~iI~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTG-VIIILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhH-HHHHHHHHHHHH
Confidence 34568899999999988866543 7899999999999999999999874 111 13333 444557777888
Q ss_pred HHHHHHHHHHhhhhhhh---ccceEEEEeCC------CeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEE
Q 002339 118 AKEALEDWRRFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188 (934)
Q Consensus 118 ~~~~~~~~~r~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~V 188 (934)
+.+++++++..++.+.+ ...+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.|
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~V 200 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFI 200 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEE
Confidence 99999999988775554 45789999 67 589999999999999999999999999999999443 799
Q ss_pred EeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEE
Q 002339 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVY 268 (934)
Q Consensus 189 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~ 268 (934)
|||+|||||.|+.|.+............ ..+. ..+..+.....|+||.+.+|+ +.
T Consensus 201 DES~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~ 255 (903)
T PRK15122 201 SQAVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------AT 255 (903)
T ss_pred EccccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EE
Confidence 9999999999999986311000000000 0000 000001112345555555555 99
Q ss_pred EEEEEeccchhhhhccCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCC
Q 002339 269 GSVIFTGHDSKVMQNATT--SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG 346 (934)
Q Consensus 269 gvVv~tG~~Tki~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (934)
++|++||.+|.+++..+. .+..++++++.++++..++..+.++++.+.+++..+.. ..|
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-----~~~-------------- 316 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-----GDW-------------- 316 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-----CCH--------------
Confidence 999999999976554432 14456899999999988887776666655544332211 012
Q ss_pred CCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCce
Q 002339 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (934)
Q Consensus 347 ~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTL 426 (934)
...+.+++.+++.+||++||++++++...++.+| +++++++|+++.+|+||++++|||||||||
T Consensus 317 ------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTL 380 (903)
T PRK15122 317 ------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTL 380 (903)
T ss_pred ------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCccc
Confidence 3577788999999999999999999999999888 889999999999999999999999999999
Q ss_pred eecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccc
Q 002339 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (934)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (934)
|+|+|.+.+++..+. ..
T Consensus 381 T~~~m~V~~~~~~~~---~~------------------------------------------------------------ 397 (903)
T PRK15122 381 TQDRIILEHHLDVSG---RK------------------------------------------------------------ 397 (903)
T ss_pred ccCeEEEEEEEcCCC---CC------------------------------------------------------------
Confidence 999999988752110 00
Q ss_pred ccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCC
Q 002339 507 SRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586 (934)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~ 586 (934)
. .+++...++|... . . ..+||.|.|+++++...|...
T Consensus 398 -------------~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~---------------- 434 (903)
T PRK15122 398 -------------D---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIV---------------- 434 (903)
T ss_pred -------------h---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchh----------------
Confidence 0 0122222222110 0 0 147999999999998766421
Q ss_pred CCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhc
Q 002339 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEA 657 (934)
Q Consensus 587 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~ 657 (934)
....|+.++.+||++.||+|++++++.++++++++|||++.|+++|+.. +.+.++.+.+..++++.+
T Consensus 435 ----~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 510 (903)
T PRK15122 435 ----KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNAD 510 (903)
T ss_pred ----hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhC
Confidence 0234667788999999999999999878889999999999999999741 112345677788999999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeE
Q 002339 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (934)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv 737 (934)
|+|++++|||.++.++..++ ..+..|+||+|+|+++++||+|++++++|++|+++||+|
T Consensus 511 G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v 569 (903)
T PRK15122 511 GFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAV 569 (903)
T ss_pred CCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeE
Confidence 99999999999865432110 012347899999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhh
Q 002339 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (934)
Q Consensus 738 ~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 817 (934)
+|+|||+..||.++|+++||... . +++|.++
T Consensus 570 ~miTGD~~~tA~aIA~~lGI~~~--~-----------------------------------------------vi~G~el 600 (903)
T PRK15122 570 KVLTGDNPIVTAKICREVGLEPG--E-----------------------------------------------PLLGTEI 600 (903)
T ss_pred EEECCCCHHHHHHHHHHcCCCCC--C-----------------------------------------------ccchHhh
Confidence 99999999999999999999521 1 4567666
Q ss_pred hHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHH
Q 002339 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVM 896 (934)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~ 896 (934)
+.+.++++.+.... ..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |++
T Consensus 601 ~~~~~~el~~~v~~------~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--Ake 671 (903)
T PRK15122 601 EAMDDAALAREVEE------RTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKE 671 (903)
T ss_pred hhCCHHHHHHHhhh------CCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHH
Confidence 66555444443322 339999999999999999998 8999999999999999999999999995 7777 999
Q ss_pred hCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 897 ~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
+||++|+++++ +..+ +.+||..|.|+++++.|.+
T Consensus 672 aADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~l 707 (903)
T PRK15122 672 SADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTA 707 (903)
T ss_pred hcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999998766 7887 8999999999999988765
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.3e-87 Score=818.83 Aligned_cols=611 Identities=20% Similarity=0.234 Sum_probs=481.3
Q ss_pred CCCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 002339 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (934)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~ 125 (934)
+..+|+++||+|.++.++.+.++ +.+++||..|++++++++++++++. ..| ...+.++++++++.+...++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~-~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDL-EATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhH-HHHHHhhhHHHHHHHHHHHHHH
Confidence 34578899999999998865443 8899999999999999999999873 333 3344455777788888889998
Q ss_pred HHhhhhh---hhccceEEEEeC------CCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCC
Q 002339 126 RRFMQDK---EVNARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (934)
Q Consensus 126 ~r~k~~~---~~n~~~~~V~~r------~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGE 196 (934)
+..++.. .+.+.+++|+ | ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 8877654 4445789999 7 8999999999999999999999999999999999443 79999999999
Q ss_pred CcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecc
Q 002339 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (934)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~ 276 (934)
|.|+.|.+++.... . .+..+.....|+||.+.+|. +.++|++||.
T Consensus 186 S~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~ 230 (867)
T TIGR01524 186 SLPVEKFVEDKRAR---D-----------PEILERENLCFMGTNVLSGH---------------------AQAVVLATGS 230 (867)
T ss_pred CCcccccCCccccc---c-----------ccccccccceecCCeEEEeE---------------------EEEEEEEEcC
Confidence 99999988753200 0 00001122346666666666 9999999999
Q ss_pred chhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHH
Q 002339 277 DSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (934)
Q Consensus 277 ~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (934)
+|.+++.. .. +..++++++.++++..++..+.++++++.++++.+... .| .
T Consensus 231 ~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-----~~--------------------~ 284 (867)
T TIGR01524 231 STWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-----DW--------------------L 284 (867)
T ss_pred ccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC-----CH--------------------H
Confidence 99765543 34 55578999999999999988888877766555332110 12 3
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEE
Q 002339 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (934)
Q Consensus 354 ~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (934)
..+..++.+++.+||++||++++++...++.+| +++++++|+++.+|.||++++||||||||||+|+|++
T Consensus 285 ~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 285 EAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEE
Confidence 577888999999999999999999999999888 8899999999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
.++.... .. .
T Consensus 355 ~~~~~~~----~~-~----------------------------------------------------------------- 364 (867)
T TIGR01524 355 EKHIDSS----GE-T----------------------------------------------------------------- 364 (867)
T ss_pred EEEecCC----CC-C-----------------------------------------------------------------
Confidence 8864110 00 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
..+++...++|+... ...+||.|.|+++++....... ...
T Consensus 365 ---------~~~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~ 404 (867)
T TIGR01524 365 ---------SERVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TAS 404 (867)
T ss_pred ---------HHHHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------Hhh
Confidence 012333333332210 0136999999999987532100 124
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhcCCeEEEE
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLAL 664 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~Glr~l~~ 664 (934)
.++.++.+||+|+||||+++++++++..++|+|||++.|+++|+.. +++.++.+.+.+++++.+|+|++++
T Consensus 405 ~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5677888999999999999999776678999999999999999751 1123456778889999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCC
Q 002339 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (934)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~ 744 (934)
|||+++.++.. + .+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+
T Consensus 485 A~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~ 541 (867)
T TIGR01524 485 ATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541 (867)
T ss_pred EEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 99998654210 0 012368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHH
Q 002339 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (934)
Q Consensus 745 ~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~ 824 (934)
..||.++|+++||...+ +++|.+++...+++
T Consensus 542 ~~tA~aIA~~lGI~~~~-------------------------------------------------v~~g~~l~~~~~~e 572 (867)
T TIGR01524 542 EIVTARICQEVGIDAND-------------------------------------------------FLLGADIEELSDEE 572 (867)
T ss_pred HHHHHHHHHHcCCCCCC-------------------------------------------------eeecHhhhhCCHHH
Confidence 99999999999995321 34555554443333
Q ss_pred HHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeec
Q 002339 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIA 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~ 903 (934)
+.+... +..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||+.|||||||+ |++. |+++||++|+
T Consensus 573 l~~~~~------~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLl 643 (867)
T TIGR01524 573 LARELR------KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILL 643 (867)
T ss_pred HHHHhh------hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEe
Confidence 333222 2349999999999999999998 8999999999999999999999999995 6777 9999999999
Q ss_pred Cccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 904 QFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 904 ~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++++ +..+ +.+||.+|.|+++++.|.+
T Consensus 644 dd~~~~I~~a-i~~gR~i~~ni~k~i~~~l 672 (867)
T TIGR01524 644 EKSLMVLEEG-VIEGRNTFGNILKYLKMTA 672 (867)
T ss_pred cCChHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 8776 7777 8999999999999998765
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=7.7e-87 Score=802.37 Aligned_cols=588 Identities=20% Similarity=0.257 Sum_probs=480.0
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r 127 (934)
++|+++||+|.++..+.+.| +.|+++|..|+++.++++++++++. ..|...++ ++++++++++.+++++++.
T Consensus 8 ~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 8 KKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 46788999999998666654 7889999999999999999999884 34444444 5577778888899999998
Q ss_pred hhhhhhh---ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce-EEEEeecCCCCCcceeee
Q 002339 128 FMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI-CYVETMNLDGETNLKVKR 203 (934)
Q Consensus 128 ~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~-~~Vdes~LtGEs~~~~K~ 203 (934)
.++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++ |. +.||||+|||||.|+.|.
T Consensus 80 ~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-----g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-----GDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-----cCceEEEcccccCCccceEec
Confidence 8876554 45889999 89999999999999999999999999999999999 54 899999999999999998
Q ss_pred cccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh-
Q 002339 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ- 282 (934)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~- 282 (934)
+++.. |+||.+.+|. +.++|++||.+|.+++
T Consensus 154 ~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 87554 9999999998 9999999999997655
Q ss_pred --ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 002339 283 --NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (934)
Q Consensus 283 --~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (934)
...+.+..++++|+.++++..+++++.++++++.++++.+.... .| ...+.+++
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~i 241 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFAL 241 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHHH
Confidence 45566667799999999999999888888887776654331110 12 35678889
Q ss_pred HHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcC
Q 002339 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (934)
Q Consensus 361 ~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~ 440 (934)
.+++.+|||+||++++++..+++.++ +++++++|+++.+|.||.+|+||||||||||+|+|.+.+++..+
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 311 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF 311 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecC
Confidence 99999999999999999999999988 89999999999999999999999999999999999999987532
Q ss_pred eeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCCh
Q 002339 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (934)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (934)
..+.
T Consensus 312 ~~~~---------------------------------------------------------------------------- 315 (755)
T TIGR01647 312 NGFD---------------------------------------------------------------------------- 315 (755)
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 1000
Q ss_pred hHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEe
Q 002339 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (934)
Q Consensus 521 ~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (934)
..+++...++|+.. .++||.|.|+++++++.+. ....|++++.
T Consensus 316 --~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~ 358 (755)
T TIGR01647 316 --KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEF 358 (755)
T ss_pred --HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEE
Confidence 01234444555420 1479999999998875430 0244677889
Q ss_pred cCCCCCCceEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHH
Q 002339 601 LDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNS 679 (934)
Q Consensus 601 ~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~ 679 (934)
+||++.+|+|+++++.++ |+.++++|||++.|+++|+... +.++.+.+.+++++.+|+|++++|+|+.
T Consensus 359 ~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~-~~~~~~~~~~~~~~~~G~rvl~vA~~~~---------- 427 (755)
T TIGR01647 359 VPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK-EIEEKVEEKVDELASRGYRALGVARTDE---------- 427 (755)
T ss_pred eccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEEEcC----------
Confidence 999999999999998764 7788999999999999997532 3556778889999999999999999721
Q ss_pred HHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 680 EFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 680 ~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||+..||.++|+++||.+
T Consensus 428 ------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 428 ------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred ------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999999999999999999999999964
Q ss_pred CCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce
Q 002339 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV 839 (934)
Q Consensus 760 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~ 839 (934)
.. + .+ ++ +.+|..++...++++.+...+ ..
T Consensus 484 ~~---~--~~---~~------------------------------------l~~~~~~~~~~~~~~~~~~~~------~~ 513 (755)
T TIGR01647 484 NI---Y--TA---DV------------------------------------LLKGDNRDDLPSGELGEMVED------AD 513 (755)
T ss_pred CC---c--CH---HH------------------------------------hcCCcchhhCCHHHHHHHHHh------CC
Confidence 20 0 00 00 111222211112222222222 23
Q ss_pred EEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhhhc
Q 002339 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVVHG 916 (934)
Q Consensus 840 i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~~G 916 (934)
+|||++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||||+ |++. |+++||++|+++++ +..+ +..|
T Consensus 514 vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~g 589 (755)
T TIGR01647 514 GFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILES 589 (755)
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHH
Confidence 9999999999999999998 8999999999999999999999999994 6776 99999999999777 7777 8999
Q ss_pred hhhhHHhhhheEEEecc
Q 002339 917 HWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 917 r~~~~~i~~~i~~~~~k 933 (934)
|..|+|+++++.|.+..
T Consensus 590 R~~~~ni~k~i~~~~~~ 606 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAE 606 (755)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999998887643
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-83 Score=724.15 Aligned_cols=717 Identities=21% Similarity=0.273 Sum_probs=517.1
Q ss_pred cCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHh
Q 002339 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRF 128 (934)
Q Consensus 49 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~ 128 (934)
+|+.-||.|.|..+..+.+ ..|+.+..+|+++|..+..++|.. .+++.+...++++-..+++...+|..+..
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999987 789999999999999999999887 56666666666777778888888887777
Q ss_pred hhhhhhcc--ceEEEEeCCCeEEEeecccCccCcEEEecc-CcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecc
Q 002339 129 MQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAM 205 (934)
Q Consensus 129 k~~~~~n~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~-ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~ 205 (934)
+..+.+-. ..|+|+ |+|.|++|.+++|+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|.
T Consensus 240 ~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCC
Confidence 77776654 478899 89999999999999999999998 999999999999 8899999999999999999998
Q ss_pred cccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhccC
Q 002339 206 EATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNAT 285 (934)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~ 285 (934)
+.-... ..-.+.+...+..+..|.||.+++-+.. -.+-+.|+|++||..|.-++..+
T Consensus 314 ~~~~~~--------~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLVR 370 (1140)
T KOG0208|consen 314 PMGTDS--------LDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLVR 370 (1140)
T ss_pred cccccc--------CcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHHH
Confidence 621110 1111233334455566888877743310 01238999999999997777776
Q ss_pred CCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHh
Q 002339 286 TSPS-KRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYG 364 (934)
Q Consensus 286 ~~~~-k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~ 364 (934)
..-. |..+++-+-+- ..++.++.+++++.++...+..... + .+.-..+++++.++.
T Consensus 371 silyPkP~~fkfyrds--~~fi~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsLDliT 427 (1140)
T KOG0208|consen 371 SILYPKPVNFKFYRDS--FKFILFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSLDLIT 427 (1140)
T ss_pred hhcCCCCcccHHHHHH--HHHHHHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhhcEEE
Confidence 4322 22233333332 2333334444444444433321111 0 111247888999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeecc
Q 002339 365 YLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYG 444 (934)
Q Consensus 365 ~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~ 444 (934)
..+|++||.++++.......++ .+++|.|-+++.+...|+++.+|||||||||++.+.+-.+..-...-.
T Consensus 428 i~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~ 497 (1140)
T KOG0208|consen 428 IVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVD 497 (1140)
T ss_pred EecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccc
Confidence 9999999999999999888888 899999999999999999999999999999999999988875322100
Q ss_pred CCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHH
Q 002339 445 VSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLL 524 (934)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (934)
.. .+... ..+ + + . + +.-.. .-+.......
T Consensus 498 ~~-~~~~~--~~~------~----~-------------------------~--------~----~~~~l-~~~~~~~~~~ 526 (1140)
T KOG0208|consen 498 DG-PELKV--VTE------D----S-------------------------L--------Q----LFYKL-SLRSSSLPMG 526 (1140)
T ss_pred cc-chhhh--hhh------h----h-------------------------c--------c----ceeec-cccccCCchH
Confidence 00 00000 000 0 0 0 0 00000 0001111234
Q ss_pred HHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeec--------CCe---EEEEecCC---CCCCC
Q 002339 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSS---VFIRERYP---PKGQP 590 (934)
Q Consensus 525 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~--------~~~---~~i~~~~~---~~~~~ 590 (934)
.|..++|.||+.....+. ..++|.|.-+.++ .|+.+.+.. .++ ..++...+ ...+.
T Consensus 527 ~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~ 596 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTEC 596 (1140)
T ss_pred HHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcC
Confidence 688999999988765432 2378888776653 466664421 011 11111110 01111
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l 669 (934)
..+.+-+++.+||+|..+||||||.++ +.+.++|+|||||.|.+.|+++. ++.++.+.++.|+.+|+|++++|+|.+
T Consensus 597 ~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L 674 (1140)
T KOG0208|consen 597 GEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALASKEL 674 (1140)
T ss_pred CCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEecCcc
Confidence 123799999999999999999999986 46799999999999999999875 889999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+.. .|.+..+ ..| +.+|+||+|+|++.+|++||++++.+|++|++|.|+++|+|||+..||+
T Consensus 675 ~~~---~~~~~~~-------~~R--------d~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTai 736 (1140)
T KOG0208|consen 675 ETS---TLQKAQK-------LSR--------DTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAI 736 (1140)
T ss_pred Ccc---hHHHHhh-------ccH--------hhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheee
Confidence 876 4433221 233 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEcCCCch-hHHHHHHHHHHHhHHHHHHH---HHh-hh----hccCCCCCcEEEEEcChhhhHh
Q 002339 750 NIGFACSLLRQGMKQICITALNSD-SVGKAAKEAVKDNILMQITN---ASQ-MI----KLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 750 ~ia~~~gi~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~-~~----~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
.+|++||++.+..+++...-...+ +....+.....++ ..+... .+. .. ..+......+.+.++|+.+..+
T Consensus 737 sVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i 815 (1140)
T KOG0208|consen 737 SVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVES-QTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVI 815 (1140)
T ss_pred ehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccC-ccccCCCCccCccccCCccChhhhccceeEEEecCchhHHH
Confidence 999999999998887765544221 1000000000000 000000 000 00 0011234568999999999988
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ 900 (934)
. .+..+.+.++...+. |||||+|.||.++|+.+|+ .|..|+|||||+||+.||++|||||+++.+| |.-||.|
T Consensus 816 ~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApF 888 (1140)
T KOG0208|consen 816 L-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPF 888 (1140)
T ss_pred H-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCcc
Confidence 8 455556666666555 9999999999999999998 8999999999999999999999999999888 7889999
Q ss_pred eec--CccchhhhHhhhchhhhHHhhh
Q 002339 901 SIA--QFRFLERLLVVHGHWCYKRIAQ 925 (934)
Q Consensus 901 ii~--~~~~l~~lll~~Gr~~~~~i~~ 925 (934)
.-. +.+.+..+ +.+||..+-..-.
T Consensus 889 TSk~~~I~cVp~v-IrEGRaALVTSf~ 914 (1140)
T KOG0208|consen 889 TSKTPSISCVPDV-IREGRAALVTSFA 914 (1140)
T ss_pred ccCCCchhhHhHH-HhhhhhhhhhhHH
Confidence 977 56668888 8999977654433
No 19
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.5e-75 Score=676.12 Aligned_cols=526 Identities=17% Similarity=0.194 Sum_probs=406.9
Q ss_pred HHHHhhHHHHHHHHHHHHhccc--CCC----CCc--cccchhhHHHHH---HHHHHHHHHHHHHhhhhhhhcc---c-eE
Q 002339 75 FEQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVG---VSMAKEALEDWRRFMQDKEVNA---R-KV 139 (934)
Q Consensus 75 ~~qf~~~~~~~~l~~~il~~~~--~~~----~~~--~~~~~~l~~v~~---~~~~~~~~~~~~r~k~~~~~n~---~-~~ 139 (934)
-.+|++|..+.++++++++++. +.. ..| +..+..++++++ +..+.|.+.++|..++.+.+.+ . ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 3567889999999999998864 111 011 222222222222 2333344445665555444443 3 57
Q ss_pred E-EEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhh
Q 002339 140 S-VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (934)
Q Consensus 140 ~-V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (934)
+ |. |||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++...
T Consensus 107 ~~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~---------- 170 (673)
T PRK14010 107 RRIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF---------- 170 (673)
T ss_pred EEEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc----------
Confidence 6 55 89999999999999999999999999999999999 7789999999999999999987110
Q ss_pred cCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh---hccCCCCCccchHH
Q 002339 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIE 295 (934)
Q Consensus 219 ~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~ 295 (934)
...|+||.+.+|. +.++|+.||.+|.++ ...+.++.+++|+|
T Consensus 171 --------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e 215 (673)
T PRK14010 171 --------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNE 215 (673)
T ss_pred --------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHH
Confidence 0248999999888 999999999999654 45667777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHH
Q 002339 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (934)
Q Consensus 296 ~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~ 375 (934)
..+..+...+.++.+ +++.++.. +. .|. .....+...+.+++.+||++|+..+
T Consensus 216 ~~l~~l~~~l~ii~l--~~~~~~~~-~~--------~~~----------------~~~~~~~~~val~V~~IP~aL~~~~ 268 (673)
T PRK14010 216 IALFTLLMTLTIIFL--VVILTMYP-LA--------KFL----------------NFNLSIAMLIALAVCLIPTTIGGLL 268 (673)
T ss_pred HHHHHHHHHHhHHHH--HHHHHHHH-HH--------hhc----------------cHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 877666544332221 11111110 00 000 0113455666777788999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHH
Q 002339 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (934)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 455 (934)
+++...++.++ +++++++|++..+|.||.+|+||||||||||+|++.+..+.... +
T Consensus 269 ~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~---~----------- 324 (673)
T PRK14010 269 SAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK---S----------- 324 (673)
T ss_pred HHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC---C-----------
Confidence 99988888888 89999999999999999999999999999999877766543100 0
Q ss_pred HhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcce
Q 002339 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (934)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~ 535 (934)
....+++...++|+.
T Consensus 325 -----------------------------------------------------------------~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 325 -----------------------------------------------------------------SSFERLVKAAYESSI 339 (673)
T ss_pred -----------------------------------------------------------------ccHHHHHHHHHHhcC
Confidence 011234555566653
Q ss_pred eeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEE
Q 002339 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (934)
Q Consensus 536 ~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (934)
. +.||.+.|+++++++.|+.... .....+||++++|+|++.+.
T Consensus 340 ~--------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 340 A--------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT 382 (673)
T ss_pred C--------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC
Confidence 2 3599999999999987653210 01123799999999998753
Q ss_pred cCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHH
Q 002339 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (934)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (934)
++ .+.|||++.++++|...+...+..+.+..++++.+|+|+++++
T Consensus 383 ---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~------------------------------ 427 (673)
T PRK14010 383 ---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL------------------------------ 427 (673)
T ss_pred ---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE------------------------------
Confidence 32 4569999999999986544445567777889999999999877
Q ss_pred HHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhH
Q 002339 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (934)
Q Consensus 696 l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~ 775 (934)
.|++++|+++++|++|++++++|++||++||+++|+|||+..||..+|+++|+..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3778999999999999999999999999999999999999999999999999952
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHH
Q 002339 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (934)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~ 855 (934)
+++|++|+||.++|+.
T Consensus 483 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 498 (673)
T PRK14010 483 ----------------------------------------------------------------FVAECKPEDKINVIRE 498 (673)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 8999999999999999
Q ss_pred HhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 856 lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+|+ .|+.|+|+|||.||+|+|++||||||| +|++. |+++||++++++++ |..+ +..||..|.|+++++.|++.
T Consensus 499 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 499 EQA-KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHh-CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeee
Confidence 998 899999999999999999999999999 57777 99999999998777 7777 89999999999999999874
No 20
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-78 Score=671.42 Aligned_cols=678 Identities=21% Similarity=0.240 Sum_probs=527.7
Q ss_pred cCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc--C-C-------CCCccccchhhHHHHHHHHH
Q 002339 49 KRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L-S-------PFSPVSMLLPLAIVVGVSMA 118 (934)
Q Consensus 49 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~--~-~-------~~~~~~~~~~l~~v~~~~~~ 118 (934)
.++.+-|+|.++.+|.+.-| ..+.+|++..+.+.+++.++++++. + . ..+.+ ..+.|+.+++++.+
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly-~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLY-LGIVLAAVVIVTGL 141 (1019)
T ss_pred hhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceE-EEEEEEEEEEEEec
Confidence 56778999999999987743 6688999999999999999999865 1 1 12222 23345566666666
Q ss_pred HHHHHHHHHhhh---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCC
Q 002339 119 KEALEDWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (934)
Q Consensus 119 ~~~~~~~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtG 195 (934)
...+++.+..+- .+.+-.+.|+|+ |||....+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 666666555543 344556899999 89999999999999999999999999999999999887 9999999999
Q ss_pred CCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEec
Q 002339 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (934)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 275 (934)
||.|..+.+......-. ......|.+|.+++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~-----------------Et~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPL-----------------ETRNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCch-----------------hheeeeeeeeEEecce---------------------EEEEEEecC
Confidence 99999998754331111 1112348888888888 999999999
Q ss_pred cchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhH
Q 002339 276 HDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (934)
Q Consensus 276 ~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (934)
.+|.+++... .....++|+++.+++++.++..+++++.+..|++..+..+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~-------------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW-------------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh--------------------
Confidence 9998776554 4567789999999999999998888888877766554321 23
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceE
Q 002339 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (934)
Q Consensus 353 ~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (934)
+..+.+.+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||...+||+|||||||+|.|+
T Consensus 314 l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMt 383 (1019)
T KOG0203|consen 314 LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 383 (1019)
T ss_pred HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceE
Confidence 3455568889999999999999999999999999 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCcccccccccc
Q 002339 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (934)
Q Consensus 433 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (934)
|.++|.++.....+.++.. ++.
T Consensus 384 Vahlw~d~~i~~~d~~~~~------------------------------------------------~~~---------- 405 (1019)
T KOG0203|consen 384 VAHLWFDNQIHEADTTEDQ------------------------------------------------SGQ---------- 405 (1019)
T ss_pred EEeeccCCceeeeechhhh------------------------------------------------hcc----------
Confidence 9999987765432221100 000
Q ss_pred CCCCCCChhHHHHHHHHHhhcceeeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCC
Q 002339 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (934)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (934)
.....+.....+.++..+||.+.....+.+-. -.-..+++.|.||++++.-.-... ..
T Consensus 406 --~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~ 465 (1019)
T KOG0203|consen 406 --SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------ME 465 (1019)
T ss_pred --cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HH
Confidence 00112346678999999999998875443221 122359999999999987432111 11
Q ss_pred ceeEEEEeEecCCCCCCceEEEEEEcCC---CcEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHHHhcC
Q 002339 591 VEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~G 658 (934)
.++.++.+..+||+|.+|.+-.+.+..+ .+..+..|||||.++++|+. .++...+.+.+...++...|
T Consensus 466 ~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~G 545 (1019)
T KOG0203|consen 466 LRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLG 545 (1019)
T ss_pred HHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcc
Confidence 3577888999999999999999998754 57999999999999999986 12235667788888999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
-||+.||++.++++++.+.-.-.-... +.--.+|.|+|++++-||+|..+|+++..||.|||||+
T Consensus 546 erVlgF~~~~l~~~~~p~~~~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvi 610 (1019)
T KOG0203|consen 546 ERVLGFCDLELPDEKFPRGFQFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVI 610 (1019)
T ss_pred hHHHHHHHHhcchhcCCCceEeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEE
Confidence 999999999999876654321110000 11125899999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||++.||.++|++.||+....++.. ++... ........++....+.++.|.++.
T Consensus 611 mVTgdhpiTAkAiA~~vgIi~~~~et~e-------------------~~a~r----~~~~v~~vn~~~a~a~VihG~eL~ 667 (1019)
T KOG0203|consen 611 MVTGDHPITAKAIAKSVGIISEGSETVE-------------------DIAKR----LNIPVEQVNSRDAKAAVIHGSELP 667 (1019)
T ss_pred EEecCccchhhhhhhheeeecCCchhhh-------------------hhHHh----cCCcccccCccccceEEEeccccc
Confidence 9999999999999999999876543211 00000 000011112233578899999998
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE--cccchhhHHH
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQAVM 896 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam--~~~e~~~a~~ 896 (934)
.+.++++.+ +.......||||.+|+||..||+..|+ .|.+|+.+|||.||.|||+.||||||| +|++. +|+
T Consensus 668 ~~~~~qld~----il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKq 740 (1019)
T KOG0203|consen 668 DMSSEQLDE----LLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQ 740 (1019)
T ss_pred ccCHHHHHH----HHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHh
Confidence 776655443 344455679999999999999999998 899999999999999999999999999 58888 999
Q ss_pred hCcEeecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 897 ~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
+||+||++++| ++.- +.+||.+|.|++|.|.|.+-
T Consensus 741 AADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLT 777 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLT 777 (1019)
T ss_pred hcceEEecCcchhheee-cccceehhhhHHHHHHHHHH
Confidence 99999999888 5555 89999999999999998764
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.1e-75 Score=673.72 Aligned_cols=520 Identities=20% Similarity=0.193 Sum_probs=416.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHhccc-CCC------CCccccc---hhhHHHHHHHHHHHHHHHHHHhhhhhhhcc----ce
Q 002339 73 ALFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RK 138 (934)
Q Consensus 73 ~l~~qf~~~~~~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~----~~ 138 (934)
.--.||++|..+.++++++++++. +.+ ..+...+ +.+++.+++..+.+.+.++|..++.+.+.+ .+
T Consensus 26 ~~~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~ 105 (679)
T PRK01122 26 DPRVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTF 105 (679)
T ss_pred CHHHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 345688999999999999999864 111 1222222 233444455556667777777766555543 36
Q ss_pred EEEEeCCCe-EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhh
Q 002339 139 VSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAF 217 (934)
Q Consensus 139 ~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~ 217 (934)
++|+ |+|+ +++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++..
T Consensus 106 a~vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~--------- 170 (679)
T PRK01122 106 ARKL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF--------- 170 (679)
T ss_pred EEEE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc---------
Confidence 9999 7777 9999999999999999999999999999999 7799999999999999999987431
Q ss_pred hcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhh---ccCCCCCccchH
Q 002339 218 KEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGI 294 (934)
Q Consensus 218 ~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l 294 (934)
...|+||.+++|. +.+.|+.+|.+|.+++ ..+.++..++|+
T Consensus 171 ---------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~ 214 (679)
T PRK01122 171 ---------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPN 214 (679)
T ss_pred ---------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHH
Confidence 1248999999888 9999999999996544 556777778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHH
Q 002339 295 EKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVS 374 (934)
Q Consensus 295 ~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~ 374 (934)
|..++.+...++++.++++++.+.+ .||... -..+...+.+++.+|||+|+..
T Consensus 215 e~al~~l~~~l~~i~l~~~~~~~~~-----------~~~~g~----------------~~~l~~~iallV~aiP~alg~l 267 (679)
T PRK01122 215 EIALTILLAGLTIIFLLVVATLPPF-----------AAYSGG----------------ALSITVLVALLVCLIPTTIGGL 267 (679)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHH-----------HHHhCc----------------hHHHHHHHHHHHHcccchhhhH
Confidence 9988887766654444333332222 122100 1256677888999999999998
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHH
Q 002339 375 IEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAA 454 (934)
Q Consensus 375 ~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~ 454 (934)
++++...++.++ .++++++|++..+|.||++|+||||||||||+|+|.+..++..+. .
T Consensus 268 ~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------- 325 (679)
T PRK01122 268 LSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----V------- 325 (679)
T ss_pred HHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----C-------
Confidence 888888888888 899999999999999999999999999999999999988753110 0
Q ss_pred HHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcc
Q 002339 455 AKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICH 534 (934)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~ 534 (934)
..++++.+.++|+
T Consensus 326 -------------------------------------------------------------------~~~~ll~~a~~~s 338 (679)
T PRK01122 326 -------------------------------------------------------------------TEEELADAAQLSS 338 (679)
T ss_pred -------------------------------------------------------------------CHHHHHHHHHHhc
Confidence 0013455556664
Q ss_pred eeeecccCCCCceEEecCChhHHHHHHHHHH-CCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEE
Q 002339 535 TAIPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVI 613 (934)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 613 (934)
.. +.||.+.||+++++. .++... ...++..+.+||++.+++|++.
T Consensus 339 ~~--------------s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~ 384 (679)
T PRK01122 339 LA--------------DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVD 384 (679)
T ss_pred CC--------------CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEE
Confidence 33 358999999999986 343210 1124456678999999888876
Q ss_pred EEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHH
Q 002339 614 VRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693 (934)
Q Consensus 614 v~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~ 693 (934)
+. | ..|.|||++.|++.|...+.+.++.+.+..++++.+|+|++++|+
T Consensus 385 ~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~--------------------------- 432 (679)
T PRK01122 385 LD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE--------------------------- 432 (679)
T ss_pred EC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE---------------------------
Confidence 53 3 579999999999999776555677888889999999999999994
Q ss_pred HHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCch
Q 002339 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773 (934)
Q Consensus 694 ~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~ 773 (934)
|++++|+++++|++|++++++|++||++||+++|+|||++.||..+|+++|+.+
T Consensus 433 ------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-------------- 486 (679)
T PRK01122 433 ------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------- 486 (679)
T ss_pred ------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE--------------
Confidence 678999999999999999999999999999999999999999999999999942
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHH
Q 002339 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVT 853 (934)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv 853 (934)
+++|++|+||.++|
T Consensus 487 ------------------------------------------------------------------v~A~~~PedK~~iV 500 (679)
T PRK01122 487 ------------------------------------------------------------------FLAEATPEDKLALI 500 (679)
T ss_pred ------------------------------------------------------------------EEccCCHHHHHHHH
Confidence 89999999999999
Q ss_pred HHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHhCcEeecCccc--hhhhHhhhchhhhH
Q 002339 854 RLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYK 921 (934)
Q Consensus 854 ~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~ 921 (934)
+.+|+ .|+.|+|+|||.||+|||++||||||| +|++. |+++||++++++++ |..+ +..||+..-
T Consensus 501 ~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~ 567 (679)
T PRK01122 501 RQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLM 567 (679)
T ss_pred HHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHh
Confidence 99998 899999999999999999999999999 57777 99999999998777 7777 899998874
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.3e-71 Score=645.10 Aligned_cols=533 Identities=18% Similarity=0.219 Sum_probs=420.9
Q ss_pred HHHHHHhhHHHHHHHHHHHHhccc-CCC-------C--Cccccc--hhhHHHHHHHHHHHHHHHHHHhhhhhhhcc---c
Q 002339 73 ALFEQFNRVANIYFLIAALLSVTP-LSP-------F--SPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R 137 (934)
Q Consensus 73 ~l~~qf~~~~~~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~---~ 137 (934)
.--.||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.+.+.+++..++.+.+.+ .
T Consensus 25 ~~~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~ 104 (675)
T TIGR01497 25 NPKAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKT 104 (675)
T ss_pred CHHHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 334678999999999999988764 210 1 244322 223344556666777888887777666654 3
Q ss_pred -eEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhh
Q 002339 138 -KVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEA 216 (934)
Q Consensus 138 -~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 216 (934)
.++|+++||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++..
T Consensus 105 ~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~-------- 171 (675)
T TIGR01497 105 TFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF-------- 171 (675)
T ss_pred ceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc--------
Confidence 47787458999999999999999999999999999999999 7799999999999999999987532
Q ss_pred hhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhh---hccCCCCCccch
Q 002339 217 FKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSG 293 (934)
Q Consensus 217 ~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~ 293 (934)
...|+||.+.+|. +.+.|+.+|.+|.++ ...+.++.+++|
T Consensus 172 ----------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktp 214 (675)
T TIGR01497 172 ----------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTP 214 (675)
T ss_pred ----------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCCh
Confidence 0148898888887 999999999999554 455677777899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHH
Q 002339 294 IEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYV 373 (934)
Q Consensus 294 l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v 373 (934)
+|..++.+..++.++.++++++.. .+..|.. ....+...+.+++.+|||+|+.
T Consensus 215 lq~~l~~l~~~l~~v~li~~~~~~-~~~~~~~--------------------------~~~~~~~lvallV~aiP~aLg~ 267 (675)
T TIGR01497 215 NEIALTILLIALTLVFLLVTATLW-PFAAYGG--------------------------NAISVTVLVALLVCLIPTTIGG 267 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcC--------------------------hhHHHHHHHHHHHHhCchhhhh
Confidence 999888876655433333222111 1110100 0124555688899999998877
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHH
Q 002339 374 SIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELA 453 (934)
Q Consensus 374 ~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~ 453 (934)
.++.+...++.++ .+.++++|++..+|.||++|+||||||||||+|+|++..++..+. .
T Consensus 268 l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------ 326 (675)
T TIGR01497 268 LLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V------ 326 (675)
T ss_pred HHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C------
Confidence 7777766777777 889999999999999999999999999999999999998763110 0
Q ss_pred HHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCCChhHHHHHHHHHhhc
Q 002339 454 AAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAIC 533 (934)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC 533 (934)
...+++...++|
T Consensus 327 --------------------------------------------------------------------~~~~ll~~aa~~ 338 (675)
T TIGR01497 327 --------------------------------------------------------------------DEKTLADAAQLA 338 (675)
T ss_pred --------------------------------------------------------------------cHHHHHHHHHHh
Confidence 011345555666
Q ss_pred ceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEE
Q 002339 534 HTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVI 613 (934)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 613 (934)
+.. +.||.+.|++++|++.|..... ..++..+..||++.+++|++.
T Consensus 339 ~~~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~ 384 (675)
T TIGR01497 339 SLA--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGIN 384 (675)
T ss_pred cCC--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEE
Confidence 432 3689999999999987653211 112345678999998777765
Q ss_pred EEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHH
Q 002339 614 VRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADRE 693 (934)
Q Consensus 614 v~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~ 693 (934)
+. +| ..|.||+++.+++.|...+...+..+.+.+++++.+|+|++++|+
T Consensus 385 ~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------- 433 (675)
T TIGR01497 385 LD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------- 433 (675)
T ss_pred Ee--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------
Confidence 54 33 579999999999988765555667788889999999999999995
Q ss_pred HHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCch
Q 002339 694 ATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSD 773 (934)
Q Consensus 694 ~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~ 773 (934)
|.+++|+++++|++||+++++|++|+++||+++|+|||+..+|..+|+++|+.+
T Consensus 434 ------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------- 487 (675)
T TIGR01497 434 ------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------- 487 (675)
T ss_pred ------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE--------------
Confidence 457999999999999999999999999999999999999999999999999942
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHH
Q 002339 774 SVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVT 853 (934)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv 853 (934)
+++|++|++|..+|
T Consensus 488 ------------------------------------------------------------------v~a~~~PedK~~~v 501 (675)
T TIGR01497 488 ------------------------------------------------------------------FIAEATPEDKIALI 501 (675)
T ss_pred ------------------------------------------------------------------EEcCCCHHHHHHHH
Confidence 78999999999999
Q ss_pred HHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEeecCccc--hhhhHhhhchhhhHHhhhheEEE
Q 002339 854 RLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIK 930 (934)
Q Consensus 854 ~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 930 (934)
+.+++ .|+.|+|+|||.||+|||+.|||||+|+ |++. ++++||++++++++ |..+ +.+||..+-....+-.|+
T Consensus 502 ~~lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 502 RQEQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFS 577 (675)
T ss_pred HHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheee
Confidence 99998 7899999999999999999999999995 5666 99999999999777 7777 899999998888887777
Q ss_pred ec
Q 002339 931 DF 932 (934)
Q Consensus 931 ~~ 932 (934)
+.
T Consensus 578 ~~ 579 (675)
T TIGR01497 578 IA 579 (675)
T ss_pred ec
Confidence 53
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-71 Score=609.40 Aligned_cols=639 Identities=21% Similarity=0.274 Sum_probs=456.5
Q ss_pred CCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 002339 53 KYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (934)
Q Consensus 53 ~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~ 132 (934)
+||+|......+++- ..|.|.-..|+..|..+...||+.- ..||.+++.|++++.+ |+---++|.+...
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~ls 243 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRTLS 243 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 499999999999986 6788888999999999999999974 5677777777665544 3333455555443
Q ss_pred ---hhc--cceEEEEeCCCeEEEeecccCccCcEEEecc---CcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeec
Q 002339 133 ---EVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (934)
Q Consensus 133 ---~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~---ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~ 204 (934)
.+. +..+.|+ |+++|+.+..++|.|||+|.|.. ...+|||++||. |.|.|||++|||||.|..|.+
T Consensus 244 e~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE~ 317 (1160)
T KOG0209|consen 244 EFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKES 317 (1160)
T ss_pred HHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccccc
Confidence 333 3667889 89999999999999999999987 678999999999 889999999999999999999
Q ss_pred ccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec-CCeEEEEEEEeccchhhhhc
Q 002339 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN-TAHVYGSVIFTGHDSKVMQN 283 (934)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n-t~~~~gvVv~tG~~Tki~~~ 283 (934)
..... . ...++.+..++....|.||.+++-... .-+.++- .+-++|.|++||.+|..+..
T Consensus 318 Ie~~~----~------d~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGkL 378 (1160)
T KOG0209|consen 318 IELRD----S------DDILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGKL 378 (1160)
T ss_pred cccCC----h------hhhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCce
Confidence 86552 1 112333344455667888877732100 0111111 24489999999999977666
Q ss_pred cCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeccc--CCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002339 284 ATTS---PSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ--TPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (934)
Q Consensus 284 ~~~~---~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (934)
.+.. ..+-+. =|+-..+++++++++|++++ +++|.... .+..-| ..|+-
T Consensus 379 vRtilf~aervTa----Nn~Etf~FILFLlVFAiaAa--~Yvwv~Gskd~~RsrY--------------------KL~Le 432 (1160)
T KOG0209|consen 379 VRTILFSAERVTA----NNRETFIFILFLLVFAIAAA--GYVWVEGSKDPTRSRY--------------------KLFLE 432 (1160)
T ss_pred eeeEEecceeeee----ccHHHHHHHHHHHHHHHHhh--heEEEecccCcchhhh--------------------heeee
Confidence 6532 111111 13334444555555665543 33443221 111111 34566
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEEEEE
Q 002339 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (934)
Q Consensus 359 ~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (934)
+..++.+.+|.-||+-++++--.+...+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.++.-
T Consensus 433 C~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag 502 (1160)
T KOG0209|consen 433 CTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAG 502 (1160)
T ss_pred eeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEeccc
Confidence 8888999999999998777765555555 788999999999999999999999999999999999998742
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccCCCCCC
Q 002339 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (934)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (934)
....-+. . .+
T Consensus 503 ~~~~~~~-~---------------------------------------------------------------------~~ 512 (1160)
T KOG0209|consen 503 LSADEGA-L---------------------------------------------------------------------TP 512 (1160)
T ss_pred ccCCccc-c---------------------------------------------------------------------cc
Confidence 1110000 0 00
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEe
Q 002339 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (934)
Q Consensus 519 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (934)
-.+.-.+-+..+|.||+.....++ ..|+|.|+|.+++ .||.+...+. . .+..|+ ....++.
T Consensus 513 ~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v-----~p~~~~--~~~lkI~ 573 (1160)
T KOG0209|consen 513 ASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--V-----CPREGN--GKKLKII 573 (1160)
T ss_pred hhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc--c-----CCCcCC--Ccccchh
Confidence 001111456799999999776543 3599999999975 5666644221 1 111121 3468889
Q ss_pred EecCCCCCCceEEEEEEcCC----CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHH
Q 002339 599 NLLDFTSKRKRMSVIVRDED----GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEY 674 (934)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~ 674 (934)
+.+.|+|..|||||++.... -++++.+|||||.|..++.. .+..+.+...+|+.+|.|||+++||.+..---
T Consensus 574 ~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~ 649 (1160)
T KOG0209|consen 574 QRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMV 649 (1160)
T ss_pred hhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccch
Confidence 99999999999999998642 36999999999999999885 67788889999999999999999999873211
Q ss_pred HHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 675 SAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 675 ~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++ .| +.-.+.+|+||+|.|++.|.-|+|++++++|+.|++++++++|+|||++.||.++|++
T Consensus 650 ~q--------------~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 650 SQ--------------VR----DLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred hh--------------hh----hhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 11 11 1223788999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccC---CCCCcEEEEEcChhhhHhhhHHH-HHHHH
Q 002339 755 CSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLER---DPHAAYALIIEGKTLAYALEDDM-KHHFL 830 (934)
Q Consensus 755 ~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvi~g~~l~~~~~~~~-~~~~~ 830 (934)
+|+......++...+..... + +.+..-++ +..-.++... .-...+.+.++|..++.+...+. ...+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~-~--~~w~s~d~------t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~ 782 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGN-Q--LEWVSVDG------TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP 782 (1160)
T ss_pred eeeeccCceeeccCccCCCc-e--eeEecCCC------ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh
Confidence 99997765555444332110 0 00000000 0000000000 01234567899999998877652 22222
Q ss_pred hhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccc
Q 002339 831 GLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVE 890 (934)
Q Consensus 831 ~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e 890 (934)
. ..||||+.|.||..++..+|+ .|+.|+|||||.||++||++||||||+ ++.+
T Consensus 783 h------v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 783 H------VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred h------eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 2 449999999999999999998 999999999999999999999999998 5554
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-66 Score=606.26 Aligned_cols=465 Identities=32% Similarity=0.453 Sum_probs=390.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 105 MLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 105 ~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
.++++++.++-...+...++..+...+..+++++++|+ |+| ++.|++++|+|||+|.|++||.|||||+|++ |
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g 75 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----G 75 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----c
Confidence 34555555555556666666666666666888999999 788 9999999999999999999999999999999 7
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.+.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 76 ~~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~------------------- 109 (499)
T TIGR01494 76 SCFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT------------------- 109 (499)
T ss_pred cEEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE-------------------
Confidence 799999999999999999997665 8899999998
Q ss_pred CeEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 265 AHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+...|..+|.+|. +..........++++++..+++. .+++++.++++++.+++|..+... .
T Consensus 110 --~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~--------- 174 (499)
T TIGR01494 110 --LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWD----P--------- 174 (499)
T ss_pred --EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----c---------
Confidence 8889999999984 44444455555799999999998 777777777777776665432100 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
. .+...+.+++.+++.+|||+|+++++++...+...+ .++++++|+++.+|+||+++++||
T Consensus 175 ------~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~f 235 (499)
T TIGR01494 175 ------N---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICS 235 (499)
T ss_pred ------c---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEe
Confidence 0 124688999999999999999999999999998888 788999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|+|.++++.+.
T Consensus 236 DKTGTLT~~~~~v~~~~~~~~----------------------------------------------------------- 256 (499)
T TIGR01494 236 DKTGTLTKNEMSFKKVSVLGG----------------------------------------------------------- 256 (499)
T ss_pred eCCCccccCceEEEEEEecCC-----------------------------------------------------------
Confidence 999999999999999864321
Q ss_pred CCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i 580 (934)
++.++||+|.|++++++..+
T Consensus 257 -----------------------------------------------~~~s~hp~~~ai~~~~~~~~------------- 276 (499)
T TIGR01494 257 -----------------------------------------------EYLSGHPDERALVKSAKWKI------------- 276 (499)
T ss_pred -----------------------------------------------CcCCCChHHHHHHHHhhhcC-------------
Confidence 01247999999999886411
Q ss_pred EecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCe
Q 002339 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (934)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr 660 (934)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++.++.+|+|
T Consensus 277 -----------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~ 328 (499)
T TIGR01494 277 -----------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLR 328 (499)
T ss_pred -----------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCE
Confidence 1356999999999999986433 4789999999988752 23455578889999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEE
Q 002339 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (934)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ml 740 (934)
++++|++ -+++|+++++|++|++++++|+.|+++|+++||+
T Consensus 329 ~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 329 VLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred EEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 9999963 2699999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHh
Q 002339 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (934)
Q Consensus 741 TGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 820 (934)
|||+..+|..+|+++|+
T Consensus 370 tGD~~~~a~~ia~~lgi--------------------------------------------------------------- 386 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI--------------------------------------------------------------- 386 (499)
T ss_pred cCCCHHHHHHHHHHcCc---------------------------------------------------------------
Confidence 99999999999999875
Q ss_pred hhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE
Q 002339 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ 900 (934)
+++++|++|.++|+.+++ .|+.|+|+|||.||++||+.|||||+|+ |+++||+
T Consensus 387 --------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adi 439 (499)
T TIGR01494 387 --------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADI 439 (499)
T ss_pred --------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCe
Confidence 356899999999999997 7899999999999999999999999995 6889999
Q ss_pred eecCccc--hhhhHhhhchhhhHHhhhheEEEecc
Q 002339 901 SIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 901 ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+|.+++. +..+ +.+||+.++++++++.|.++.
T Consensus 440 vl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 440 VLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9998655 4555 999999999999999987764
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-66 Score=599.63 Aligned_cols=482 Identities=22% Similarity=0.276 Sum_probs=394.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecC
Q 002339 108 PLAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181 (934)
Q Consensus 108 ~l~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~ 181 (934)
.-++++++..+.+++|++-+.++.+.+ .+++++++++||++++|+.++|+|||+|.|++||.||+||+|++
T Consensus 176 ~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~--- 252 (713)
T COG2217 176 EAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS--- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe---
Confidence 344566666778889998888865433 45888888566779999999999999999999999999999999
Q ss_pred CCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEe
Q 002339 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261 (934)
Q Consensus 182 ~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l 261 (934)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 --G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~---------------- 287 (713)
T COG2217 253 --GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS---------------- 287 (713)
T ss_pred --CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc----------------
Confidence 8899999999999999999999988 9999999999
Q ss_pred ecCCeEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCC
Q 002339 262 RNTAHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKE 338 (934)
Q Consensus 262 ~nt~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~ 338 (934)
+...|..+|.||. +.+..++++..|+|+|+..|++..++.+..++++++++++|.++... .|
T Consensus 288 -----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~------ 352 (713)
T COG2217 288 -----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DW------ 352 (713)
T ss_pred -----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cH------
Confidence 9999999999995 45566789999999999999999999999999999988876543320 12
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEE
Q 002339 339 TDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418 (934)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i 418 (934)
...+.+++.+++.+|||+|.++++++.+.+.... ++.|+++|+...+|.|+++|+|
T Consensus 353 --------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tv 408 (713)
T COG2217 353 --------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTV 408 (713)
T ss_pred --------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEE
Confidence 2478899999999999999999999999999988 8999999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccc
Q 002339 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRR 498 (934)
Q Consensus 419 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (934)
+||||||||+|+|.+..+...+. +.+
T Consensus 409 vFDKTGTLT~G~p~v~~v~~~~~----~e~-------------------------------------------------- 434 (713)
T COG2217 409 VFDKTGTLTEGKPEVTDVVALDG----DED-------------------------------------------------- 434 (713)
T ss_pred EEeCCCCCcCCceEEEEEecCCC----CHH--------------------------------------------------
Confidence 99999999999999999864322 111
Q ss_pred cCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeE
Q 002339 499 IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV 578 (934)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~ 578 (934)
+++...+ ..+..++||...|++++|+..|..-...
T Consensus 435 --------------------------~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~~----- 469 (713)
T COG2217 435 --------------------------ELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVED----- 469 (713)
T ss_pred --------------------------HHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCccc-----
Confidence 1111111 1123368999999999998876211110
Q ss_pred EEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 579 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
+++. .|++ ....+ +| ..+.-|.+.-+.+.-. .... .....+.+..+|
T Consensus 470 -~~~i---~G~G-------------------v~~~v---~g--~~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G 516 (713)
T COG2217 470 -FEEI---PGRG-------------------VEAEV---DG--ERVLVGNARLLGEEGI----DLPL-LSERIEALESEG 516 (713)
T ss_pred -eeee---ccCc-------------------EEEEE---CC--EEEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcC
Confidence 1000 0111 11111 23 3445577765533211 1111 456677888899
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
..++.++. |.+++|+++++|++|++++++|++|++.|+++.
T Consensus 517 ~t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~ 557 (713)
T COG2217 517 KTVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVV 557 (713)
T ss_pred CeEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEE
Confidence 99888884 668999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||+..+|..+|+++||..
T Consensus 558 mLTGDn~~~A~~iA~~lGId~----------------------------------------------------------- 578 (713)
T COG2217 558 MLTGDNRRTAEAIAKELGIDE----------------------------------------------------------- 578 (713)
T ss_pred EEcCCCHHHHHHHHHHcChHh-----------------------------------------------------------
Confidence 999999999999999999943
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~ 897 (934)
+.+.+.|++|.++|+.+|+ .|+.|+|+|||.||+|+|..|||||||+ |+|. |+++
T Consensus 579 ---------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~ea 634 (713)
T COG2217 579 ---------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEA 634 (713)
T ss_pred ---------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHh
Confidence 8889999999999999997 8999999999999999999999999995 7888 9999
Q ss_pred CcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
||++|++.+. +..+ +..+|..++++++++.|.|
T Consensus 635 ADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 635 ADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred CCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999998666 6666 8999999999999998875
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-65 Score=550.52 Aligned_cols=600 Identities=20% Similarity=0.232 Sum_probs=459.3
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhccc----CCCCCccccchhhHHHHHHHHHHHHH
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP----LSPFSPVSMLLPLAIVVGVSMAKEAL 122 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~~----~~~~~~~~~~~~l~~v~~~~~~~~~~ 122 (934)
.+.|++.||.|+....|-+.+ +.|+..|.+|..|..-.++++.... -.|.+|..... ++.++++++...++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~g-I~~LLliNsti~Fv 116 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVG-ICCLLLINSTISFI 116 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hheeeeecceeeee
Confidence 446889999999998888876 6788888999999999999888754 22345544433 44556678888888
Q ss_pred HHHHHhhhhhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcc
Q 002339 123 EDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (934)
Q Consensus 123 ~~~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~ 199 (934)
++++.-..-.++. ..++.|+ |||+|.+++.+.|+|||||.|+.|++||||++||+.. .+.||+|.|||||-|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 8888777644443 4788999 8999999999999999999999999999999999854 489999999999999
Q ss_pred eeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchh
Q 002339 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (934)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 279 (934)
+.|++++.+ |+|+.+-+|+ +.+||++||..|.
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999988 9999999999 9999999999996
Q ss_pred hhhccC--CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccccCCCCCchhHHHHHH
Q 002339 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (934)
Q Consensus 280 i~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (934)
.++-.. .+.....++++-++-+..++++.+. +.+++-+...++... .-| -...-
T Consensus 224 ~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~----R~~-------------------r~~i~ 279 (942)
T KOG0205|consen 224 FGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQH----RLY-------------------RDGID 279 (942)
T ss_pred ehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhh----hhh-------------------hhhhh
Confidence 654332 2356678999999998777654433 333222221111110 011 01222
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecCCCceeecceEEEE--
Q 002339 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK-- 435 (934)
Q Consensus 358 ~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~-- 435 (934)
+.+++++.-||++||..+++...+++.++ ++++++++...++|+|+.+|++|+|||||||.|++.+.+
T Consensus 280 nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred heheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 34455566699999999999999999999 899999999999999999999999999999999998866
Q ss_pred E--EEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCCccccccccccC
Q 002339 436 C--SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (934)
Q Consensus 436 ~--~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (934)
+ +..|.. .
T Consensus 350 ~ev~v~gv~----~------------------------------------------------------------------ 359 (942)
T KOG0205|consen 350 IEVFVKGVD----K------------------------------------------------------------------ 359 (942)
T ss_pred ceeeecCCC----h------------------------------------------------------------------
Confidence 2 211110 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCcee
Q 002339 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (934)
Q Consensus 514 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (934)
+. ..++.|++. .. ...+..|.|++...++- +....
T Consensus 360 -------D~-~~L~A~rAs----r~-----------en~DAID~A~v~~L~dP----------------------Keara 394 (942)
T KOG0205|consen 360 -------DD-VLLTAARAS----RK-----------ENQDAIDAAIVGMLADP----------------------KEARA 394 (942)
T ss_pred -------HH-HHHHHHHHh----hh-----------cChhhHHHHHHHhhcCH----------------------HHHhh
Confidence 00 012222221 11 13578888888765420 11256
Q ss_pred EEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002339 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (934)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e 673 (934)
.|+.++.+||++..||....+.+++|..+..+||||+.|++.|.... +.++...+.+++|+++|+|.|++|++..++..
T Consensus 395 ~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~ 473 (942)
T KOG0205|consen 395 GIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKT 473 (942)
T ss_pred CceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhcccccc
Confidence 78999999999999999999999999999999999999999998754 58999999999999999999999998877542
Q ss_pred HHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 002339 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (934)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 753 (934)
- +.-....+|+|+.-+-||+|.+..++|.+....|..|-|+|||...-++..++
T Consensus 474 ~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 474 K--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred c--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 0 11124688999999999999999999999999999999999999999999999
Q ss_pred HcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh
Q 002339 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (934)
Q Consensus 754 ~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~ 833 (934)
.+|+-.+-.+--..-+.+.+ -.+.|.......+
T Consensus 528 rlgmgtnmypss~llG~~~~------------------------------------~~~~~~~v~elie----------- 560 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKD------------------------------------GSMPGSPVDELIE----------- 560 (942)
T ss_pred hhccccCcCCchhhccCCCC------------------------------------CCCCCCcHHHHhh-----------
Confidence 99985432110000000000 0011111111111
Q ss_pred hccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccc--hhhh
Q 002339 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERL 911 (934)
Q Consensus 834 ~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~--l~~l 911 (934)
+.--|+.+.|+||..+|+.||+ .++.++|.|||.||+|+|+.||+||++.+.... |..+||+++..... +...
T Consensus 561 ---~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a 635 (942)
T KOG0205|consen 561 ---KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA 635 (942)
T ss_pred ---hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH
Confidence 1226788999999999999998 899999999999999999999999999654331 77889999998665 4445
Q ss_pred HhhhchhhhHHhhhheEEEecc
Q 002339 912 LVVHGHWCYKRIAQMVIIKDFP 933 (934)
Q Consensus 912 ll~~Gr~~~~~i~~~i~~~~~k 933 (934)
+..+|.+|+|++.+..|.+.-
T Consensus 636 -vltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 636 -VLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred -HHHHHHHHHHHhhheeeeehh
Confidence 789999999999999998753
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.2e-62 Score=586.83 Aligned_cols=475 Identities=21% Similarity=0.230 Sum_probs=383.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCC
Q 002339 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (934)
Q Consensus 110 ~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~ 183 (934)
++++++..+.+++|.+.+.|+.+.+ ...+++|+ |||++++|++++|+|||+|+|++||.|||||+|++
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~----- 283 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS----- 283 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----
Confidence 3445555667778877777765433 45789999 89999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec
Q 002339 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (934)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (934)
|.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 284 g~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------ 318 (741)
T PRK11033 284 PFASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------ 318 (741)
T ss_pred CcEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce------------------
Confidence 7799999999999999999998766 9999999998
Q ss_pred CCeEEEEEEEeccchhh---hhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 264 TAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 264 t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+.+.|+.+|.+|.+ .+..++++.+++|+|+.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 ---~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~~-------- 383 (741)
T PRK11033 319 ---VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----PW-------- 383 (741)
T ss_pred ---EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CH--------
Confidence 99999999999955 4455677788999999999999999999999999988875332110 12
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
...+.+++.+++.+|||+|.++.+++........ +++|+++|+.+.+|.|+++++|||
T Consensus 384 ------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~f 441 (741)
T PRK11033 384 ------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAF 441 (741)
T ss_pred ------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEE
Confidence 2356778899999999999999988888877777 789999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|++..+...+.. ++
T Consensus 442 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 465 (741)
T PRK11033 442 DKTGTLTEGKPQVTDIHPATGI-----SE--------------------------------------------------- 465 (741)
T ss_pred eCCCCCcCCceEEEEEEecCCC-----CH---------------------------------------------------
Confidence 9999999999999987632210 00
Q ss_pred CCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i 580 (934)
.+++...+.. +..+.||.+.|+++++++.|..
T Consensus 466 -----------------------~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~----------- 497 (741)
T PRK11033 466 -----------------------SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA----------- 497 (741)
T ss_pred -----------------------HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-----------
Confidence 0122211111 1125799999999999875532
Q ss_pred EecCCCCCCCceeEEEEeEecCCCCCCceEE-EEEEc-CCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMS-VIVRD-EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~-~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
+||.++++.+. .-++. -+|.. +.-|+++.+.+ ....+...++.+..+|
T Consensus 498 --------------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------~~~~~~~~~~~~~~~g 547 (741)
T PRK11033 498 --------------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------LADAFAGQINELESAG 547 (741)
T ss_pred --------------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------ccHHHHHHHHHHHhCC
Confidence 34455555442 11221 23433 23478877643 1233455667889999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
.|++++|+ |.+++|+++++|++|++++++|++|+++|++++
T Consensus 548 ~~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ 588 (741)
T PRK11033 548 KTVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGV 588 (741)
T ss_pred CEEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 99999994 668999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||+..+|..+|+++||.
T Consensus 589 llTGd~~~~a~~ia~~lgi~------------------------------------------------------------ 608 (741)
T PRK11033 589 MLTGDNPRAAAAIAGELGID------------------------------------------------------------ 608 (741)
T ss_pred EEcCCCHHHHHHHHHHcCCC------------------------------------------------------------
Confidence 99999999999999999983
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~ 897 (934)
.+++..|++|..+|+.+++ . +.|+|+|||.||++||+.|||||+|+ +.+. ++++
T Consensus 609 ---------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~ 663 (741)
T PRK11033 609 ---------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALET 663 (741)
T ss_pred ---------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHh
Confidence 3345789999999999986 3 58999999999999999999999995 5665 8899
Q ss_pred CcEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
||+++.+.+. |..+ +..||..++++++++.|.|
T Consensus 664 adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~ 698 (741)
T PRK11033 664 ADAALTHNRLRGLAQM-IELSRATHANIRQNITIAL 698 (741)
T ss_pred CCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999987665 6666 8999999999999998764
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-63 Score=558.97 Aligned_cols=495 Identities=21% Similarity=0.248 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHHHHhhhhh------hhccceEEEEeCCCe-EEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce
Q 002339 113 VGVSMAKEALEDWRRFMQDK------EVNARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~------~~n~~~~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~ 185 (934)
+.+..+.+++|..-++|+.. .+.+.++.++ .+|+ .++|+...|++||+|+|.||+.||+||++++ |.
T Consensus 348 i~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 348 ITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 34556677888888887644 3346889988 7886 8999999999999999999999999999999 88
Q ss_pred EEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCC
Q 002339 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (934)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (934)
++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------------------- 454 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------------------- 454 (951)
T ss_pred eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------------------
Confidence 99999999999999999999887 8999999999
Q ss_pred eEEEEEEEeccchh---hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc
Q 002339 266 HVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (934)
Q Consensus 266 ~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (934)
.+.-+..+|.||. |.++.++++..++|+|+.+|+++.++.++++++++.++++|.+..... .||
T Consensus 455 -l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~--------- 521 (951)
T KOG0207|consen 455 -LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKY--------- 521 (951)
T ss_pred -EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccC---------
Confidence 9999999999995 556667899999999999999999999999999999999988866533 222
Q ss_pred cCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecC
Q 002339 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (934)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DK 422 (934)
+..........|..++.+++.+|||+|.++.+++.+.+.... +.+|+++|..+.+|.+.+|++|.|||
T Consensus 522 --~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 522 --PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred --cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 111112334588889999999999999999999888777766 89999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCC
Q 002339 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (934)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (934)
|||||+|++.+.++...... .
T Consensus 590 TGTLT~G~~~V~~~~~~~~~----~------------------------------------------------------- 610 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP----I------------------------------------------------------- 610 (951)
T ss_pred CCceecceEEEEEEEecCCc----c-------------------------------------------------------
Confidence 99999999999998754321 0
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEe
Q 002339 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (934)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~ 582 (934)
...+++...+ ..+-.++||...|++++|+...... +..
T Consensus 611 -------------------~~~e~l~~v~--------------a~Es~SeHPig~AIv~yak~~~~~~-----~~~---- 648 (951)
T KOG0207|consen 611 -------------------SLKEALALVA--------------AMESGSEHPIGKAIVDYAKEKLVEP-----NPE---- 648 (951)
T ss_pred -------------------cHHHHHHHHH--------------HHhcCCcCchHHHHHHHHHhccccc-----Ccc----
Confidence 0112222211 1112358999999999999876111 000
Q ss_pred cCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEE
Q 002339 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (934)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l 662 (934)
.++..-.|..+.....+.+. +.. .+-|.-+.|. +++....+.+.+.+++....|..+.
T Consensus 649 -------------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~----r~~~~~~~~i~~~~~~~e~~g~tvv 706 (951)
T KOG0207|consen 649 -------------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMS----RNGCSIPDDILDALTESERKGQTVV 706 (951)
T ss_pred -------------ccceeecccCCCcccceEEe---eeE--EeechHHHHH----hcCCCCchhHHHhhhhHhhcCceEE
Confidence 11111112222211111111 111 3446654443 2333355678888889999999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcC
Q 002339 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (934)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTG 742 (934)
++|. |.+++|+++++|++|+|+..+|+.|++.||++.|+||
T Consensus 707 ~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 707 YVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9994 7789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhh
Q 002339 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (934)
Q Consensus 743 D~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 822 (934)
|+..+|.++|+++|+..
T Consensus 748 Dn~~aA~svA~~VGi~~--------------------------------------------------------------- 764 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGIDN--------------------------------------------------------------- 764 (951)
T ss_pred CCHHHHHHHHHhhCcce---------------------------------------------------------------
Confidence 99999999999999532
Q ss_pred HHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcEe
Q 002339 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDFS 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~i 901 (934)
|+|++.|+||.+.|+.+|+ .++.|+|+|||.||+|+|.+|||||+|+ |++. |.++||++
T Consensus 765 -----------------V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIV 824 (951)
T KOG0207|consen 765 -----------------VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIV 824 (951)
T ss_pred -----------------EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEE
Confidence 9999999999999999998 7899999999999999999999999994 7777 99999999
Q ss_pred ecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 902 IAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 902 i~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
|++.+. +... +..+|+..+|++.++.|.+
T Consensus 825 Lmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~ 855 (951)
T KOG0207|consen 825 LMRNDLRDVPFA-IDLSRKTVKRIKLNFVWAL 855 (951)
T ss_pred EEccchhhhHHH-HHHHHHHHhhHHHHHHHHH
Confidence 998755 3344 7899999999999887764
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.4e-60 Score=560.47 Aligned_cols=480 Identities=23% Similarity=0.273 Sum_probs=373.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCC-eEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCce
Q 002339 113 VGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (934)
Q Consensus 113 ~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g-~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~ 185 (934)
+++..+..+++.+.++++.+.+ ++..++|+ |+| +++++++++|+|||+|.|++||.|||||+|++ |.
T Consensus 25 ~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~-----g~ 98 (556)
T TIGR01525 25 LFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS-----GE 98 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe-----cc
Confidence 3333444555555555544433 34779999 774 99999999999999999999999999999999 77
Q ss_pred EEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCC
Q 002339 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (934)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (934)
+.||||+|||||.|+.|++++.. |+||.+.+|.
T Consensus 99 ~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~-------------------- 131 (556)
T TIGR01525 99 SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS-------------------- 131 (556)
T ss_pred eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce--------------------
Confidence 99999999999999999987655 9999999998
Q ss_pred eEEEEEEEeccchhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCccc
Q 002339 266 HVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (934)
Q Consensus 266 ~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (934)
+.++|+.||.+|.+++.. .....+++++++.+++++.++.++.++++++.+++|.+...
T Consensus 132 -~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~----------------- 193 (556)
T TIGR01525 132 -LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA----------------- 193 (556)
T ss_pred -EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------
Confidence 999999999999776544 35566789999999999999999999999888877543210
Q ss_pred cCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEecC
Q 002339 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (934)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DK 422 (934)
...+..++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||++|++||||
T Consensus 194 ----------~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDK 253 (556)
T TIGR01525 194 ----------LGALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDK 253 (556)
T ss_pred ----------chHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeC
Confidence 0367788999999999999999999999999988 88999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCCC
Q 002339 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (934)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (934)
|||||+|+|++.++...+... .
T Consensus 254 TGTLT~~~~~v~~~~~~~~~~-~--------------------------------------------------------- 275 (556)
T TIGR01525 254 TGTLTTGKPTVVDVEPLDDAS-I--------------------------------------------------------- 275 (556)
T ss_pred CCCCcCCceEEEEEEecCCCC-c---------------------------------------------------------
Confidence 999999999999886432110 0
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEe
Q 002339 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (934)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~ 582 (934)
...+++...+.+. ..+.||.+.|+++++++.|..... +
T Consensus 276 -------------------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~------- 313 (556)
T TIGR01525 276 -------------------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--Q------- 313 (556)
T ss_pred -------------------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--c-------
Confidence 0012222222111 124799999999999987653211 0
Q ss_pred cCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEE
Q 002339 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (934)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l 662 (934)
. ++ ..++ .+.+...+ +|. ..+..|+++.+ ..... ........++.++.+|+|++
T Consensus 314 ---------~-~~---~~~~----~~gi~~~~---~g~-~~~~lg~~~~~----~~~~~-~~~~~~~~~~~~~~~g~~~~ 367 (556)
T TIGR01525 314 ---------E-DV---EEVP----GKGVEATV---DGQ-EEVRIGNPRLL----ELAAE-PISASPDLLNEGESQGKTVV 367 (556)
T ss_pred ---------c-Ce---eEec----CCeEEEEE---CCe-eEEEEecHHHH----hhcCC-CchhhHHHHHHHhhCCcEEE
Confidence 0 00 0000 11122221 110 22334555544 11111 12233456778889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcC-CeEEEEc
Q 002339 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG-LKIWVLT 741 (934)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aG-Ikv~mlT 741 (934)
.+|. |.+++|.+.++|+++|+++++|+.|+++| ++++|+|
T Consensus 368 ~v~~---------------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT 408 (556)
T TIGR01525 368 FVAV---------------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT 408 (556)
T ss_pred EEEE---------------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe
Confidence 9983 66899999999999999999999999999 9999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..++..+++++|+..
T Consensus 409 gd~~~~a~~i~~~lgi~~-------------------------------------------------------------- 426 (556)
T TIGR01525 409 GDNRSAAEAVAAELGIDE-------------------------------------------------------------- 426 (556)
T ss_pred CCCHHHHHHHHHHhCCCe--------------------------------------------------------------
Confidence 999999999999999932
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcc-cchhhHHHhCcE
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG-VEGMQAVMASDF 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~-~e~~~a~~~AD~ 900 (934)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.||+||++++ .+. ++..||+
T Consensus 427 ------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~ 485 (556)
T TIGR01525 427 ------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADI 485 (556)
T ss_pred ------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCE
Confidence 6778899999999999997 78899999999999999999999999963 444 8889999
Q ss_pred eecCccc--hhhhHhhhchhhhHHhhhheEEEec
Q 002339 901 SIAQFRF--LERLLVVHGHWCYKRIAQMVIIKDF 932 (934)
Q Consensus 901 ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~ 932 (934)
++.+.++ +..+ +..||..++++++++.|.+.
T Consensus 486 vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~ 518 (556)
T TIGR01525 486 VLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALG 518 (556)
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 9997444 7777 89999999999999887653
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.1e-59 Score=550.45 Aligned_cols=466 Identities=21% Similarity=0.274 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh------hccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 111 IVVGVSMAKEALEDWRRFMQDKE------VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 111 ~v~~~~~~~~~~~~~~r~k~~~~------~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
+++++..+.+++|++.++++.+. +.+.+++|++++|.+++|+.++|+|||+|+|++||.|||||+|++ |
T Consensus 59 ~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-----g 133 (562)
T TIGR01511 59 MLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-----G 133 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----C
Confidence 44444555667777766555433 334788998556888999999999999999999999999999999 8
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 134 ~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------- 167 (562)
T TIGR01511 134 ESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------- 167 (562)
T ss_pred ceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------------
Confidence 899999999999999999998766 9999999999
Q ss_pred CeEEEEEEEeccchhhhh---ccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCcc
Q 002339 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (934)
+.+.|+.||.+|.+++ ..++++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 168 --LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred --EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 9999999999996554 445667778999999999999999999888888776532
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEec
Q 002339 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (934)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (934)
..+.+++.+++.+|||+|+++++++...+...+ +++|+++|+++.+|.|+++|+||||
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEEC
Confidence 356778999999999999999999999999888 8999999999999999999999999
Q ss_pred CCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccCC
Q 002339 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (934)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (934)
||||||+|+|++..+...+.. +
T Consensus 284 KTGTLT~g~~~v~~i~~~~~~-----~----------------------------------------------------- 305 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHVFGDR-----D----------------------------------------------------- 305 (562)
T ss_pred CCCCCcCCCEEEEEEecCCCC-----C-----------------------------------------------------
Confidence 999999999999987532210 0
Q ss_pred CccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEE
Q 002339 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (934)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~ 581 (934)
. .+++..++.+ +..+.||.+.|+++++++.|.....-
T Consensus 306 ------------------~---~~~l~~aa~~--------------e~~s~HPia~Ai~~~~~~~~~~~~~~-------- 342 (562)
T TIGR01511 306 ------------------R---TELLALAAAL--------------EAGSEHPLAKAIVSYAKEKGITLVEV-------- 342 (562)
T ss_pred ------------------H---HHHHHHHHHH--------------hccCCChHHHHHHHHHHhcCCCcCCC--------
Confidence 0 1222222111 11247999999999998776532110
Q ss_pred ecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeE
Q 002339 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRT 661 (934)
Q Consensus 582 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~ 661 (934)
..++. + ..+.+...+ +| ..+..|+++.+.+. +... .++..+|.++
T Consensus 343 -----------~~~~~---~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~~--------~~~~~~g~~~ 387 (562)
T TIGR01511 343 -----------SDFKA---I----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIKI--------DGKAEQGSTS 387 (562)
T ss_pred -----------CCeEE---E----CCceEEEEE---CC--EEEEEECHHHHHhC----CCCC--------ChhhhCCCEE
Confidence 01110 0 012222222 22 23456887765321 1111 1234689998
Q ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEc
Q 002339 662 LALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (934)
Q Consensus 662 l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT 741 (934)
+.++ .|.+++|+++++|+++|+++++|++|++.|++++|+|
T Consensus 388 ~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilS 428 (562)
T TIGR01511 388 VLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLT 428 (562)
T ss_pred EEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEc
Confidence 8887 4778999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhh
Q 002339 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (934)
Q Consensus 742 GD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 821 (934)
||+..+|..+++++|+.
T Consensus 429 gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 445 (562)
T TIGR01511 429 GDNRKTAKAVAKELGIN--------------------------------------------------------------- 445 (562)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999982
Q ss_pred hHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhCcE
Q 002339 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMASDF 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~AD~ 900 (934)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|+ +.+. ++..||+
T Consensus 446 ------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Adv 504 (562)
T TIGR01511 446 ------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADV 504 (562)
T ss_pred ------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCE
Confidence 4556789999999999997 7899999999999999999999999996 4444 8899999
Q ss_pred eecC--ccchhhhHhhhchhhhHHhhhheEEEe
Q 002339 901 SIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 901 ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++.+ ++.|..+ +..||..++++++++.|.+
T Consensus 505 vl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~ 536 (562)
T TIGR01511 505 VLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAF 536 (562)
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9985 4447777 8999999999999987765
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=8.4e-59 Score=541.52 Aligned_cols=469 Identities=20% Similarity=0.242 Sum_probs=366.1
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHhhhhh---hhccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEE
Q 002339 101 SPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK---EVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177 (934)
Q Consensus 101 ~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~---~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL 177 (934)
.|+... .+++++++....+.+.+++..+..+ .+++++++|+ |+|+++.+++++|+|||+|.|++||.|||||+|+
T Consensus 17 ~~~~~~-~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGA-LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 344443 2334444444444444444443333 2356889999 8999999999999999999999999999999999
Q ss_pred eecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeec
Q 002339 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLR 257 (934)
Q Consensus 178 ~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~r 257 (934)
+ |.+.||||+|||||.|+.|++++.. |+||.+.+|.
T Consensus 95 ~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~------------ 130 (536)
T TIGR01512 95 S-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV------------ 130 (536)
T ss_pred e-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce------------
Confidence 9 7799999999999999999987655 9999999998
Q ss_pred ceEeecCCeEEEEEEEeccchhhhhcc---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCcccc
Q 002339 258 DSKLRNTAHVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334 (934)
Q Consensus 258 gs~l~nt~~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~ 334 (934)
+.++|+.||.+|.+++.. ......++++++.+++++.++.+++++++++.++++.+... |
T Consensus 131 ---------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 193 (536)
T TIGR01512 131 ---------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W-- 193 (536)
T ss_pred ---------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c--
Confidence 999999999999776544 45566789999999999999999998888877766432110 1
Q ss_pred CCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCcccccccc
Q 002339 335 KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQ 414 (934)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~ 414 (934)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||+
T Consensus 194 ------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 194 ------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEALAK 245 (536)
T ss_pred ------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhhcC
Confidence 1267778899999999999999999999999888 899999999999999999
Q ss_pred ceEEEecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCC
Q 002339 415 VDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGND 494 (934)
Q Consensus 415 v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (934)
++++|||||||||+|+|++.++...
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------------------------- 270 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------------------------- 270 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeHH-------------------------------------------------------
Confidence 9999999999999999999887420
Q ss_pred cccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeec
Q 002339 495 FKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT 574 (934)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~ 574 (934)
+++...+.+ +..+.||.+.|+++++++.+ .+
T Consensus 271 ------------------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~---- 301 (536)
T TIGR01512 271 ------------------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NV---- 301 (536)
T ss_pred ------------------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CC----
Confidence 111111111 01247999999999998654 10
Q ss_pred CCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHH
Q 002339 575 QSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEY 654 (934)
Q Consensus 575 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 654 (934)
..++ .+| .+.+...+ +|.. +..|+++.+.+. + ...+
T Consensus 302 ------------------~~~~---~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~----------~~~~ 337 (536)
T TIGR01512 302 ------------------ESVE---EVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V----------GARP 337 (536)
T ss_pred ------------------cceE---Eec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C----------Ccch
Confidence 0000 011 11122211 2332 234776544221 1 0145
Q ss_pred HhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcC
Q 002339 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (934)
Q Consensus 655 ~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aG 734 (934)
..+|.+++.++ .|..++|.+.++|+++|+++++|+.|+++|
T Consensus 338 ~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G 378 (536)
T TIGR01512 338 ESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALG 378 (536)
T ss_pred hhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcC
Confidence 56788877666 477899999999999999999999999999
Q ss_pred C-eEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEc
Q 002339 735 L-KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813 (934)
Q Consensus 735 I-kv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~ 813 (934)
+ +++|+|||+..+|..+++++|+..
T Consensus 379 i~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------------------------ 404 (536)
T TIGR01512 379 IEKVVMLTGDRRAVAERVARELGIDE------------------------------------------------------ 404 (536)
T ss_pred CCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------------------------
Confidence 9 999999999999999999999842
Q ss_pred ChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc--ccch
Q 002339 814 GKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEG 891 (934)
Q Consensus 814 g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~--~~e~ 891 (934)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+++ +.+.
T Consensus 405 --------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 405 --------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred --------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 5667889999999999997 7899999999999999999999999996 3344
Q ss_pred hhHHHhCcEeecC--ccchhhhHhhhchhhhHHhhhheEEEe
Q 002339 892 MQAVMASDFSIAQ--FRFLERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 892 ~~a~~~AD~ii~~--~~~l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
++.+||+++.+ +..|..+ +..||..++++++++.|.+
T Consensus 458 --~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~ 496 (536)
T TIGR01512 458 --AIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIAL 496 (536)
T ss_pred --HHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 88999999954 5557777 8999999999999988754
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.8e-57 Score=557.69 Aligned_cols=480 Identities=19% Similarity=0.233 Sum_probs=383.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCC
Q 002339 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (934)
Q Consensus 110 ~~v~~~~~~~~~~~~~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~ 183 (934)
.+++++..+.+++|.+-+.++.+.+ .+.+++|+ |+|.+++|+.++|+|||+|+|++||.|||||+|++
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~----- 363 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ----- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----
Confidence 3445556677888888777765443 34788999 79999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeec
Q 002339 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (934)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (934)
|.+.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 364 g~~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------ 398 (834)
T PRK10671 364 GEAWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------ 398 (834)
T ss_pred ceEEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee------------------
Confidence 8899999999999999999998776 9999999999
Q ss_pred CCeEEEEEEEeccchhhh---hccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCc
Q 002339 264 TAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (934)
Q Consensus 264 t~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (934)
+.+.|+.||.+|.++ +..++++..++++++.+++++.++++++++++++++++|.+... +
T Consensus 399 ---~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~-------- 461 (834)
T PRK10671 399 ---VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A-------- 461 (834)
T ss_pred ---EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c--------
Confidence 999999999999554 44556677789999999999999999999999888877543210 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEEe
Q 002339 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (934)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (934)
..+...+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.||+++++||
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEE
Confidence 0113467789999999999999999999999999988 899999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCcccccC
Q 002339 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (934)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (934)
|||||||+|+|++..+...+.. ++
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 546 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNGV-----DE--------------------------------------------------- 546 (834)
T ss_pred cCCCccccCceEEEEEEccCCC-----CH---------------------------------------------------
Confidence 9999999999999887532110 00
Q ss_pred CCccccccccccCCCCCCChhHHHHHH-HHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 501 GFNFEDSRLMDGNWLKEPNVDTLLLFF-RILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
.+++ .+.+++. .+.||.+.|++++++..... .
T Consensus 547 -----------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------- 579 (834)
T PRK10671 547 -----------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------- 579 (834)
T ss_pred -----------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------
Confidence 0111 1222221 14799999999988643210 0
Q ss_pred EEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002339 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (934)
...++... .+.+... .+|. .+..|+++.+..... ....+...++.+..+|.
T Consensus 580 ------------~~~~~~~~-------g~Gv~~~---~~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 580 ------------VNGFRTLR-------GLGVSGE---AEGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGA 630 (834)
T ss_pred ------------cccceEec-------ceEEEEE---ECCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCC
Confidence 01111110 0111111 1333 345699887643211 12345666778889999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEE
Q 002339 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (934)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~m 739 (934)
+++.+|+ |..++|++++.|++||+++++|+.|++.|++++|
T Consensus 631 ~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 631 TPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 9999994 5579999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhH
Q 002339 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (934)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (934)
+|||+..+|..+++++|+..
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~~------------------------------------------------------------ 691 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGIDE------------------------------------------------------------ 691 (834)
T ss_pred EcCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999842
Q ss_pred hhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEc-ccchhhHHHhC
Q 002339 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQAVMAS 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~-~~e~~~a~~~A 898 (934)
+++++.|++|.++++.++. .++.|+|+|||.||++|++.||+||+|+ +.+. ++++|
T Consensus 692 --------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~a 748 (834)
T PRK10671 692 --------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETA 748 (834)
T ss_pred --------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhC
Confidence 6778899999999999997 7889999999999999999999999995 4555 89999
Q ss_pred cEeecCccc--hhhhHhhhchhhhHHhhhheEEEe
Q 002339 899 DFSIAQFRF--LERLLVVHGHWCYKRIAQMVIIKD 931 (934)
Q Consensus 899 D~ii~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~ 931 (934)
|+++.+.+. |..+ +..||..++++++++.|.|
T Consensus 749 d~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~ 782 (834)
T PRK10671 749 AITLMRHSLMGVADA-LAISRATLRNMKQNLLGAF 782 (834)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999987555 7777 8999999999999988765
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-52 Score=437.92 Aligned_cols=487 Identities=20% Similarity=0.258 Sum_probs=368.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhc----cceEEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCC
Q 002339 107 LPLAIVVGVSMAKEALEDWRRFMQDKEVN----ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (934)
Q Consensus 107 ~~l~~v~~~~~~~~~~~~~~r~k~~~~~n----~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~ 182 (934)
+.|+|.+++.-+-|++.+-|-+-+-..+. ...++++..+|.++.+++.+|+.||+|+|+.||.||+||.+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44556666666777777765444322222 2446666456999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEee
Q 002339 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (934)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (934)
|.++||||.+||||.|+.|.++-... + +--|+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~s----------------------------s----------------VtGgT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFS----------------------------S----------------VTGGTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcc----------------------------c----------------ccCCcEEe
Confidence 99999999999999999999874321 0 01133333
Q ss_pred cCCeEEEEEEEeccch---hhhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCC
Q 002339 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (934)
Q Consensus 263 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (934)
++|+...+...-.+| ++...++.+..+++|-|..++.+..-+.++.+ +++++..-+..|..
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~-------------- 244 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSG-------------- 244 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcC--------------
Confidence 688988888877777 55667788888899999998877655543222 22222111111110
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccccccceEEE
Q 002339 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (934)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~ 419 (934)
+. -..+...+.+++.++|..+.-.++-.-..++-++ .+.+++.++..+.|..|.||+++
T Consensus 245 ------g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 245 ------GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred ------CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEE
Confidence 00 1234456777889999988877776666666666 78899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCccchhhhhcccCCCCCccccc
Q 002339 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (934)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (934)
.|||||+|-|+-.-..++..+.
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~g---------------------------------------------------------- 325 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPG---------------------------------------------------------- 325 (681)
T ss_pred ecccCceeecchhhhheecCCC----------------------------------------------------------
Confidence 9999999987654433321110
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 002339 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (934)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (934)
...+++..+..+++-. -..|...++++.|++.|+....+.
T Consensus 326 ---------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~----- 365 (681)
T COG2216 326 ---------------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDD----- 365 (681)
T ss_pred ---------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccc-----
Confidence 0112333333333211 258899999999999986553311
Q ss_pred EEecCCCCCCCceeEEE-EeEecCCCCCCceEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcC
Q 002339 580 IRERYPPKGQPVEREFK-ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (934)
Q Consensus 580 i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 658 (934)
.. --...||+.+.|+..+-.. ++ .-+-|||.+.|.......+...++.+....++.+..|
T Consensus 366 ---------------~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~G 426 (681)
T COG2216 366 ---------------LQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLG 426 (681)
T ss_pred ---------------ccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcC
Confidence 11 1345799988766555443 33 6678999999999998777778999999999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEE
Q 002339 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (934)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~ 738 (934)
-.+|+++ .|-.++|++.++|-+|+|.+|-+.+||+.|||.+
T Consensus 427 GTPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTv 467 (681)
T COG2216 427 GTPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTV 467 (681)
T ss_pred CCceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEE
Confidence 9999999 4778999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhh
Q 002339 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (934)
Q Consensus 739 mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 818 (934)
|+|||++.||..||.+.|+.+
T Consensus 468 M~TGDN~~TAa~IA~EAGVDd----------------------------------------------------------- 488 (681)
T COG2216 468 MITGDNPLTAAAIAAEAGVDD----------------------------------------------------------- 488 (681)
T ss_pred EEeCCCHHHHHHHHHHhCchh-----------------------------------------------------------
Confidence 999999999999999999853
Q ss_pred HhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEE-cccchhhHHHh
Q 002339 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQAVMA 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam-~~~e~~~a~~~ 897 (934)
..++++|++|..+|+.-|. .|+.|+|+|||.||+|+|.+||||+|| +|+.. ||++
T Consensus 489 ---------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEA 544 (681)
T COG2216 489 ---------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEA 544 (681)
T ss_pred ---------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHh
Confidence 5678999999999999998 899999999999999999999999999 57776 9999
Q ss_pred CcEeecCccc--hhhhHhhhchhh
Q 002339 898 SDFSIAQFRF--LERLLVVHGHWC 919 (934)
Q Consensus 898 AD~ii~~~~~--l~~lll~~Gr~~ 919 (934)
++.+=++-+. |... +.-|++.
T Consensus 545 aNMVDLDS~PTKliev-V~IGKql 567 (681)
T COG2216 545 ANMVDLDSNPTKLIEV-VEIGKQL 567 (681)
T ss_pred hcccccCCCccceehH-hhhhhhh
Confidence 9999777555 4444 4556544
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=7.9e-31 Score=275.34 Aligned_cols=222 Identities=25% Similarity=0.356 Sum_probs=186.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhcc---ce-EEEEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCc
Q 002339 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (934)
Q Consensus 109 l~~v~~~~~~~~~~~~~~r~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G 184 (934)
++++++++.+.+.++++++++..+.+++ .+ ++|+ |||+++.++|++|+|||||+|++||.+||||+||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 5577788888899999999999887654 44 8898 89999999999999999999999999999999998 27
Q ss_pred eEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecC
Q 002339 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (934)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (934)
.++||||.||||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999863 456789999999999 8
Q ss_pred CeEEEEEEEeccchhhhhccC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCcc
Q 002339 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (934)
Q Consensus 265 ~~~~gvVv~tG~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (934)
||++|+|++||.+|+++++.+ ..+.+++++++.++++..+++++.+++++++++++.++ .....|
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------- 181 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISF--------- 181 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHC---------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---cccccc---------
Confidence 999999999999997655444 55667799999999999999999888888877665442 111123
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhccccccCCCCCCeeeecCccccc
Q 002339 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (934)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~ 411 (934)
...+..++.+++.++|++|+++++++...++.++ .++++++|+++.+|.
T Consensus 182 -----------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 -----------FKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp -----------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred -----------ccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 2578889999999999999999999999999999 789999999999884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.85 E-value=1.3e-20 Score=195.82 Aligned_cols=97 Identities=29% Similarity=0.506 Sum_probs=90.2
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 785 (934)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 788999999999999999999999999999999999999999999999999932
Q ss_pred hHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEc--ChhhH--HHHHHHHhhcCC
Q 002339 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQK--ALVTRLVKEGTG 861 (934)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK--~~iv~~lk~~~~ 861 (934)
..+++++ +|++| ..+++.++. .+
T Consensus 169 ----------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~-~~ 195 (215)
T PF00702_consen 169 ----------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV-KP 195 (215)
T ss_dssp ----------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-TG
T ss_pred ----------------------------------------------------ccccccccccccchhHHHHHHHHhc-CC
Confidence 2388899 99999 999999995 45
Q ss_pred CEEEEEcCChhhHHHHHHcC
Q 002339 862 KTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~ 881 (934)
+.|+|+|||.||++|+++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 69999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.53 E-value=3.3e-14 Score=125.07 Aligned_cols=126 Identities=23% Similarity=0.364 Sum_probs=108.4
Q ss_pred ceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHh
Q 002339 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDN 786 (934)
Q Consensus 707 l~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 786 (934)
+...+.++---++=++|+++|++|++. ++++++|||.+-+....|.-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567888888899999999999999999 99999999999999999999996421
Q ss_pred HHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEE
Q 002339 787 ILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLA 866 (934)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~a 866 (934)
-+++...|+.|+.+++.|++ +++.|+|
T Consensus 72 ----------------------------------------------------rv~a~a~~e~K~~ii~eLkk-~~~k~vm 98 (152)
T COG4087 72 ----------------------------------------------------RVFAGADPEMKAKIIRELKK-RYEKVVM 98 (152)
T ss_pred ----------------------------------------------------eeecccCHHHHHHHHHHhcC-CCcEEEE
Confidence 17888999999999999998 8999999
Q ss_pred EcCChhhHHHHHHcCccEEEcccch--hhHHHhCcEeecCccchhhhH
Q 002339 867 IGDGANDVGMIQEADIGIGISGVEG--MQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 867 iGDG~ND~~ml~~A~vGIam~~~e~--~~a~~~AD~ii~~~~~l~~ll 912 (934)
+|||+||..||+.||+||..-+.++ ..+..+||+++-+.+-+..++
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 9999999999999999996633233 226689999998877766654
No 37
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.48 E-value=3.3e-14 Score=124.14 Aligned_cols=90 Identities=36% Similarity=0.596 Sum_probs=71.4
Q ss_pred hhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceE
Q 002339 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (934)
Q Consensus 531 ~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 610 (934)
++||++....+++..... ..|+|+|.||+.|+.++|..+... .....|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~~----------------~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDIK----------------EIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcHH----------------HHHhhcceeEEEccCccccee
Confidence 589999886655433322 569999999999999997543211 136789999999999999999
Q ss_pred EEEEEcCCCcEEEEEcccchhhhHhhhc
Q 002339 611 SVIVRDEDGQILLLCKGADSIIFDRLSK 638 (934)
Q Consensus 611 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 638 (934)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3345788999999999999974
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.22 E-value=5.2e-11 Score=128.32 Aligned_cols=195 Identities=18% Similarity=0.197 Sum_probs=106.7
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL--------------- 770 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~--------------- 770 (934)
|.||+.- ...+-+.+.++|++|+++|++++++|||+...+..+.+++++..+....++.||.
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555531 2358899999999999999999999999999999999999874332233333332
Q ss_pred -CchhHHHHHHHHHHHhHHHH----------------HHHHHhh---hhc-----cC-CC--CCcEEEEEcChhhhHhhh
Q 002339 771 -NSDSVGKAAKEAVKDNILMQ----------------ITNASQM---IKL-----ER-DP--HAAYALIIEGKTLAYALE 822 (934)
Q Consensus 771 -~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~---~~~-----~~-~~--~~~~~lvi~g~~l~~~~~ 822 (934)
+.+.....+......++... ....... ... .. .. .....++.........+.
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 167 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAI 167 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHH
Confidence 11111111111111000000 0000000 000 00 00 000111222111000111
Q ss_pred HHHHHHHHh-hhhccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHH
Q 002339 823 DDMKHHFLG-LAVECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVM 896 (934)
Q Consensus 823 ~~~~~~~~~-~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~ 896 (934)
.++...+.. .........+..++|. .|+..++.+.+..| ..|++||||.||++||+.|++||||+++... +|.
T Consensus 168 ~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~ 246 (270)
T PRK10513 168 ARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKE 246 (270)
T ss_pred HHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHH
Confidence 111111110 1101111134566665 69999998876544 6799999999999999999999999655433 999
Q ss_pred hCcEeecC
Q 002339 897 ASDFSIAQ 904 (934)
Q Consensus 897 ~AD~ii~~ 904 (934)
+||++..+
T Consensus 247 ~A~~vt~~ 254 (270)
T PRK10513 247 VAQFVTKS 254 (270)
T ss_pred hcCeeccC
Confidence 99999865
No 39
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.14 E-value=1.8e-10 Score=124.13 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=101.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------CchhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL---------------NSDSVGKAAKEA 782 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~---------------~~~~~~~~~~~~ 782 (934)
.+.+.++++|++|+++|++++++|||+...+..+..++++.. .+++.||. +.+.....+...
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~ 95 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA---YLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQ 95 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC---cEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHh
Confidence 588999999999999999999999999999999999998742 22322222 112222222111
Q ss_pred HHHhHH---------------HHHHHHHhh----hhc---cC--CCCCcEEEEEcCh-hhhHhhhHHHHHHHHh-hhhcc
Q 002339 783 VKDNIL---------------MQITNASQM----IKL---ER--DPHAAYALIIEGK-TLAYALEDDMKHHFLG-LAVEC 836 (934)
Q Consensus 783 ~~~~~~---------------~~~~~~~~~----~~~---~~--~~~~~~~lvi~g~-~l~~~~~~~~~~~~~~-~~~~~ 836 (934)
...+.. ......... ... .. .......++.... .+. .+...+...+.. .....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 174 (272)
T PRK15126 96 WDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLT-RLQIQLNEALGERAHLCF 174 (272)
T ss_pred hhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHH-HHHHHHHHHhcCCEEEEE
Confidence 110000 000000000 000 00 0000111111111 111 111122222211 11111
Q ss_pred CceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcE--eecC
Q 002339 837 ASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDF--SIAQ 904 (934)
Q Consensus 837 ~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~--ii~~ 904 (934)
...-+..++|. .|+..++.+.+..| ..|++||||.||++||+.|+.||||+++... +|.+||+ ++.+
T Consensus 175 s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~~~v~~~ 248 (272)
T PRK15126 175 SATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPHLPVIGH 248 (272)
T ss_pred cCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCCCeecCC
Confidence 11135567776 59999999977554 6799999999999999999999999765433 9999997 5543
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.10 E-value=3.6e-10 Score=121.28 Aligned_cols=189 Identities=16% Similarity=0.270 Sum_probs=104.4
Q ss_pred Eeeeeccc-CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhH-----HHHHHHHHH
Q 002339 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV-----GKAAKEAVK 784 (934)
Q Consensus 711 G~i~i~D~-lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~-----~~~~~~~~~ 784 (934)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+..++++.. .+++.||.-.... ...+.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHH
Confidence 44444554 89999999999999999999999999999999999999864 4444444321110 000111111
Q ss_pred HhHHHHHHHHHhh---hhcc--------C--C------------------CCCc-EEEEEc--ChhhhHhhhHHHHHHHH
Q 002339 785 DNILMQITNASQM---IKLE--------R--D------------------PHAA-YALIIE--GKTLAYALEDDMKHHFL 830 (934)
Q Consensus 785 ~~~~~~~~~~~~~---~~~~--------~--~------------------~~~~-~~lvi~--g~~l~~~~~~~~~~~~~ 830 (934)
..+.......... .... . . .... ..+.++ ...+... ...+.+.+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 167 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKRFP 167 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhhcc
Confidence 1111111000000 0000 0 0 0000 000111 1111111 111222221
Q ss_pred hhh--hccCceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeec
Q 002339 831 GLA--VECASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 831 ~~~--~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~ 903 (934)
... .......+..+.|. .|+..++.+.+..| ..|+||||+.||++||+.|+.||||+++.. .+++.||++..
T Consensus 168 ~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~-~~k~~A~~vt~ 246 (264)
T COG0561 168 DLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADE-ELKELADYVTT 246 (264)
T ss_pred ccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCH-HHHhhCCcccC
Confidence 111 11111122455564 69988988877555 359999999999999999999999976632 29999997755
Q ss_pred C
Q 002339 904 Q 904 (934)
Q Consensus 904 ~ 904 (934)
.
T Consensus 247 ~ 247 (264)
T COG0561 247 S 247 (264)
T ss_pred C
Confidence 4
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.07 E-value=6.4e-10 Score=119.55 Aligned_cols=63 Identities=25% Similarity=0.275 Sum_probs=51.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCc--EeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD--FSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD--~ii~~ 904 (934)
+..++|. .|+..++.+.+..| ..|++||||.||++||+.|+.||||+++... +|+.|| +++.+
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeeccc
Confidence 5567775 69999998876554 6799999999999999999999999655443 899988 66654
No 42
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.07 E-value=4.3e-10 Score=119.81 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=107.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc------------CCceEEEEcCCCchhHHHHHHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR------------QGMKQICITALNSDSVGKAAKEAVK 784 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~------------~~~~~i~~~~~~~~~~~~~~~~~~~ 784 (934)
.++.+++.++|++|+++|++++++|||.+..+..+..++++.. ...+++.....+.+.....+.....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3577999999999999999999999999999999999998751 1122222222222222233332222
Q ss_pred HhHHHHHHHHHhhhhc---------------------------cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh-hcc
Q 002339 785 DNILMQITNASQMIKL---------------------------ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-VEC 836 (934)
Q Consensus 785 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~-~~~ 836 (934)
..+...+.+....+.. ......+.. ......-...+.+++...+.... ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcceeEEE
Confidence 1100000000000000 000111111 22222222222334444443321 111
Q ss_pred CceEEEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCcc
Q 002339 837 ASVICCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 837 ~~~i~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
...-+..++|. .|+..++.+.+..| +.+++|||+.||.+||+.|+.||+|+++... ++..||+++..-+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSNN 246 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSGT
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCCC
Confidence 11133445554 69988888876433 6899999999999999999999999655433 8999999988643
No 43
>PLN02887 hydrolase family protein
Probab=99.06 E-value=5.4e-10 Score=129.73 Aligned_cols=63 Identities=25% Similarity=0.390 Sum_probs=52.1
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+.++.|. .|+..++.+.+..| ..|+|||||.||++||+.|+.||||+++... +|+.||+|..+
T Consensus 498 ~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 498 MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 4566665 69999998887555 5799999999999999999999999655433 99999999865
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.05 E-value=1.7e-09 Score=113.09 Aligned_cols=179 Identities=14% Similarity=0.155 Sum_probs=98.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc---h----hHHHHHHH-HHHHhHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS---D----SVGKAAKE-AVKDNILM 789 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~---~----~~~~~~~~-~~~~~~~~ 789 (934)
.+.+.+.++|++|+++||+++++|||+...+..+++.+|+. ...+..++.-. . .....+.. ........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47788999999999999999999999999999999999842 23444443310 0 00000000 00000000
Q ss_pred HHHHHHhhhhccC-CCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCC---CE
Q 002339 790 QITNASQMIKLER-DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTG---KT 863 (934)
Q Consensus 790 ~~~~~~~~~~~~~-~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~ 863 (934)
.. .......... .......+.... ..+.. ..+.+.+......+....+..+.|. .|+..++.+.+..+ ..
T Consensus 92 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~ 167 (225)
T TIGR01482 92 KT-FPFSRLKVQYPRRASLVKMRYGI-DVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGE 167 (225)
T ss_pred cc-cchhhhccccccccceEEEeecC-CHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHH
Confidence 00 0000000000 001111222211 11110 1111222110000111234555553 78888888866444 57
Q ss_pred EEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 864 TLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|||+.||++|++.|++|++|++.... +|..||++..+
T Consensus 168 ~i~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 168 TLVCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred EEEECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 99999999999999999999999655433 89999999764
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.04 E-value=1.8e-09 Score=113.43 Aligned_cols=178 Identities=14% Similarity=0.136 Sum_probs=99.9
Q ss_pred ccc-CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC-------chhHHHHHHHHHHHhH
Q 002339 716 EDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-------SDSVGKAAKEAVKDNI 787 (934)
Q Consensus 716 ~D~-lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~ 787 (934)
.|+ +.+.+.++|++|+++|++++++|||+...+..+++.+|+.. .++..+|.- .......+. .. ..+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~-~~-~~~ 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIE-EC-EKA 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchH-HH-HHH
Confidence 444 77899999999999999999999999999999999998742 233333321 000000000 00 000
Q ss_pred HHHHHHHH----hhhhccCCCCCc-EEEEEcChhhhHhhhHHHHHHHHhhh---hccCceEEEEcChhh--HHHHHHHHh
Q 002339 788 LMQITNAS----QMIKLERDPHAA-YALIIEGKTLAYALEDDMKHHFLGLA---VECASVICCRVSPKQ--KALVTRLVK 857 (934)
Q Consensus 788 ~~~~~~~~----~~~~~~~~~~~~-~~lvi~g~~l~~~~~~~~~~~~~~~~---~~~~~~i~~r~~p~q--K~~iv~~lk 857 (934)
...+.... ..+......... ...+....... .....+.... .......+..+.|.. |+..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVE-----EVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHH-----HHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 11110000 000000000000 11111121111 1111111110 001111345666654 888888887
Q ss_pred hcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 858 EGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 858 ~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+..+ ..+++|||+.||++|++.|++|++|++.... +|+.||++..+
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~ 215 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEK 215 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecC
Confidence 6433 5799999999999999999999999655443 89999999865
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.93 E-value=1.3e-08 Score=105.55 Aligned_cols=177 Identities=16% Similarity=0.224 Sum_probs=98.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc----hh--HHHHHHHHHHHhHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS----DS--VGKAAKEAVKDNILMQI 791 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~----~~--~~~~~~~~~~~~~~~~~ 791 (934)
++.+++.++|++|+++|++++++|||++..+..+++.+++.. .+++.+|.-. .. ................
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~- 93 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKK- 93 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhh-
Confidence 488999999999999999999999999999999999988642 2333332210 00 0000000000000000
Q ss_pred HHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCC---CEEEE
Q 002339 792 TNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTG---KTTLA 866 (934)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~---~~v~a 866 (934)
........ .........+..++...... ...+.. ..+.... ...+..++| ..|+..++.+.+..+ ..+++
T Consensus 94 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 168 (215)
T TIGR01487 94 RFPRDRLS-NEYPRASLVIMREGKDVDEV-REIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAA 168 (215)
T ss_pred hhhhhhcc-cccceeEEEEecCCccHHHH-HHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEE
Confidence 00000000 00001112222333322211 111111 0111110 112345555 479988888876444 46999
Q ss_pred EcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 867 IGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 867 iGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|||+.||++|++.|++|++|.+.... ++..||++...
T Consensus 169 iGDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~~ 205 (215)
T TIGR01487 169 IGDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTSN 205 (215)
T ss_pred ECCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcCC
Confidence 99999999999999999999654433 99999999864
No 47
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.91 E-value=1.5e-08 Score=103.48 Aligned_cols=122 Identities=21% Similarity=0.235 Sum_probs=91.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.++.|++.+.++.++++|++||++||-...-+.++|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999997543332222110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~~---~~v~aiGDG~N 872 (934)
+++|. +..+ +..+.|...++.+.+..| +.+.|+|||.|
T Consensus 130 --------------~ltG~------------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~n 171 (212)
T COG0560 130 --------------KLTGR------------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAN 171 (212)
T ss_pred --------------EEece------------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchh
Confidence 11221 3333 445788887766655344 46999999999
Q ss_pred hHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 873 DVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 873 D~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|.|||+.|+.+|+++..+. ....|+..+..
T Consensus 172 Dlpml~~ag~~ia~n~~~~--l~~~a~~~~~~ 201 (212)
T COG0560 172 DLPMLEAAGLPIAVNPKPK--LRALADVRIWP 201 (212)
T ss_pred hHHHHHhCCCCeEeCcCHH--HHHHHHHhcCh
Confidence 9999999999999987766 55556554443
No 48
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.91 E-value=9.3e-09 Score=110.98 Aligned_cols=61 Identities=25% Similarity=0.434 Sum_probs=48.3
Q ss_pred EcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 843 RVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 843 r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
...|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|++... .++..||+++.+
T Consensus 192 ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~-~lk~~Ad~v~~~ 257 (272)
T PRK10530 192 DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADD-AVKARADLVIGD 257 (272)
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchH-HHHHhCCEEEec
Confidence 44443 68888887765444 579999999999999999999999965433 388999999875
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=1e-08 Score=111.47 Aligned_cols=132 Identities=24% Similarity=0.244 Sum_probs=94.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.|+.|++.|+++.++||.....+..+..++|+...-.+.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~le------------------------------- 229 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELE------------------------------- 229 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEE-------------------------------
Confidence 4789999999999999999999999998888888888888431111110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE-EcChhhHHHHHHHHhhcCC---CEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND 873 (934)
+.+|.-- ..+.. -+..+.|...++.+.+..| ..++|||||.||
T Consensus 230 -------------i~dg~lt--------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~ND 276 (322)
T PRK11133 230 -------------IMDGKLT--------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGAND 276 (322)
T ss_pred -------------EECCEEE--------------------eEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHH
Confidence 1111000 00000 0234678888888765444 689999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhc
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHG 916 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~G 916 (934)
++|++.|++||++++.+. +++.||+++. ...|..+|...|
T Consensus 277 l~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 277 LPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred HHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHHhc
Confidence 999999999999977776 8999999996 555655554444
No 50
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.90 E-value=1.5e-08 Score=109.11 Aligned_cols=180 Identities=14% Similarity=0.166 Sum_probs=96.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC---------------------CchhHHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL---------------------NSDSVGK 777 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~---------------------~~~~~~~ 777 (934)
+-+.++++|++|+++||+++++|||....+..+++++|+.. ...+..||. +.+....
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQ 102 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHH
Confidence 45779999999999999999999999999999999998731 123333332 1111111
Q ss_pred HHHHHHHH-hHH---------HHHHHHH----hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHh--hhhccCceEE
Q 002339 778 AAKEAVKD-NIL---------MQITNAS----QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVIC 841 (934)
Q Consensus 778 ~~~~~~~~-~~~---------~~~~~~~----~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~--~~~~~~~~i~ 841 (934)
.+....+. .+. ....... ..............+.+.+..- .+ ..+...+.. +.... ...+
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~-~~~~ 178 (271)
T PRK03669 103 VLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAELGLQFVQ-GARF 178 (271)
T ss_pred HHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHCCCEEEe-cCee
Confidence 11111111 000 0000000 0000000000011122222110 00 112222221 11111 1125
Q ss_pred EEcChh--hHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcCccEEEcc-c-chhh---HHHhCcEeecC
Q 002339 842 CRVSPK--QKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEADIGIGISG-V-EGMQ---AVMASDFSIAQ 904 (934)
Q Consensus 842 ~r~~p~--qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~vGIam~~-~-e~~~---a~~~AD~ii~~ 904 (934)
..++|. .|+..++.+.++.| ..|++||||.||++||+.|++||||++ . +..+ .+..|||+...
T Consensus 179 iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 179 WHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred EEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 567774 69988888866433 579999999999999999999999963 3 2211 23468887765
No 51
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.85 E-value=2.1e-08 Score=102.10 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=85.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.|+.+++.| ++.++||-....+.++++.+|+...-...+.+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57899999999999975 999999999999999999999853111101000000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.++|. .. ..+..|..+++.++. .+..++++|||.||++|+
T Consensus 121 -------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 121 -------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 160 (203)
T ss_pred -------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHHHHH
Confidence 11111 11 346789999999976 677899999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCc
Q 002339 878 QEADIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD 899 (934)
+.||+||++.+++. .+++||
T Consensus 161 ~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 161 SEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HhCCCCEEecCCHH--HHHhCC
Confidence 99999999999887 666665
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.82 E-value=2e-08 Score=107.34 Aligned_cols=63 Identities=22% Similarity=0.436 Sum_probs=51.3
Q ss_pred EEEcChh--hHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 841 CCRVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+..++|. .|+..++.+.+..+ ..+++|||+.||++|++.|++|++|.+.... ++..||+++.+
T Consensus 179 ~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~-~k~~a~~~~~~ 246 (256)
T TIGR00099 179 SIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEE-LKALADYVTDS 246 (256)
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHH-HHHhCCEEecC
Confidence 4566665 59999998876543 5799999999999999999999999654332 89999999875
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.78 E-value=7.6e-08 Score=102.69 Aligned_cols=180 Identities=11% Similarity=0.111 Sum_probs=94.8
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc----cCCceEEEEcCC--------------CchhHHHHHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL----RQGMKQICITAL--------------NSDSVGKAAK 780 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~i~~~~~--------------~~~~~~~~~~ 780 (934)
.-+.+.++|++|+++|++++++|||....+..+.+++|+. ..++..+..... +.+.....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4457999999999999999999999999999999999863 233333322111 1111111111
Q ss_pred HHHHH-hHHHHHHHH------Hh-------hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHh--hhhccCceEEEEc
Q 002339 781 EAVKD-NILMQITNA------SQ-------MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG--LAVECASVICCRV 844 (934)
Q Consensus 781 ~~~~~-~~~~~~~~~------~~-------~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~--~~~~~~~~i~~r~ 844 (934)
..... ++....... .. .............++. +..... .+...+.. +..... ..+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~s-~~~~ei 170 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERRE----RFTEALVELGLEVTHG-NRFYHV 170 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHHH----HHHHHHHHcCCEEEeC-CceEEE
Confidence 11000 000000000 00 0000000011111222 221111 11112211 111111 124445
Q ss_pred Chh--hHHHHHHHHhhcC-----CCEEEEEcCChhhHHHHHHcCccEEEcccch--hhHHHh--C-cEeecC
Q 002339 845 SPK--QKALVTRLVKEGT-----GKTTLAIGDGANDVGMIQEADIGIGISGVEG--MQAVMA--S-DFSIAQ 904 (934)
Q Consensus 845 ~p~--qK~~iv~~lk~~~-----~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~--~~a~~~--A-D~ii~~ 904 (934)
.|. .|+..++.+.+.. ...+++|||+.||++|++.|++||||++... ..+|+. | +++...
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 554 6887777776543 4679999999999999999999999976642 226775 4 476544
No 54
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.63 E-value=2.1e-07 Score=96.82 Aligned_cols=124 Identities=23% Similarity=0.292 Sum_probs=88.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++++.|+.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999885311111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcCC---CEEEEEcCChhh
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND 873 (934)
.++|. +..+ ..+..|..+++.+.+..+ ..+++|||+.+|
T Consensus 138 -------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D 180 (219)
T TIGR00338 138 -------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGAND 180 (219)
T ss_pred -------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHH
Confidence 00000 1111 122346666665544232 468999999999
Q ss_pred HHHHHHcCccEEEcccchhhHHHhCcEeecCccc
Q 002339 874 VGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 874 ~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
+.|++.|++++++++.+. +.++||++|.+.++
T Consensus 181 i~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 181 LSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred HHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 999999999999987766 78899999997654
No 55
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.60 E-value=5.1e-07 Score=95.89 Aligned_cols=179 Identities=11% Similarity=0.119 Sum_probs=96.3
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCC-------chhH--HHHHHHHHHHh
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-------SDSV--GKAAKEAVKDN 786 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~-------~~~~--~~~~~~~~~~~ 786 (934)
..++.|.+.++|+++++.|++++++|||....+..+.+++++..++ -.+..+|.. .... ..........+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3467799999999999999999999999999999999988876543 222222221 1111 00011000001
Q ss_pred HHHHHHHHHhhhhc-c--CCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce----EEEEcCh--hhHHHHHHHHh
Q 002339 787 ILMQITNASQMIKL-E--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVK 857 (934)
Q Consensus 787 ~~~~~~~~~~~~~~-~--~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~lk 857 (934)
....+......... . .....+..+..+.......+ .++...+......+..+ -+..+.| ..|+..++.+.
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 01111110011110 0 01112223333322211111 12222222211111111 1224555 47998899887
Q ss_pred hcCC---CEEEEEcCChhhHHHHHH-cCccEEEcccchhhHHHh
Q 002339 858 EGTG---KTTLAIGDGANDVGMIQE-ADIGIGISGVEGMQAVMA 897 (934)
Q Consensus 858 ~~~~---~~v~aiGDG~ND~~ml~~-A~vGIam~~~e~~~a~~~ 897 (934)
+..+ ..|+++||+.||++|++. ++.||+|.+.... ++..
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~~ 219 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQW 219 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHHH
Confidence 6433 689999999999999998 6799999765442 5543
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.56 E-value=3.3e-07 Score=89.88 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=74.0
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|+++.|+|+.+...+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999852
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcC--hhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCc
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS--PKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~v 882 (934)
+|.... |+--..+++.+.- ....+++|||+.||++|++.|++
T Consensus 76 -----------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 76 -----------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred -----------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHHHHHHCCC
Confidence 111111 2222233333321 33679999999999999999999
Q ss_pred cEEEcccchhhHHHhCcEeecC
Q 002339 883 GIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 883 GIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|.++... ++..|+++...
T Consensus 120 ~~am~nA~~~-lk~~A~~I~~~ 140 (169)
T TIGR02726 120 AVAVGDAVAD-VKEAAAYVTTA 140 (169)
T ss_pred eEECcCchHH-HHHhCCEEcCC
Confidence 9999765432 89999998864
No 57
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.55 E-value=5.7e-07 Score=94.74 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=92.4
Q ss_pred HHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCc--------hhHH-HHHHHH-HHHhHHHHHHH
Q 002339 724 PQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS--------DSVG-KAAKEA-VKDNILMQITN 793 (934)
Q Consensus 724 ~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~--------~~~~-~~~~~~-~~~~~~~~~~~ 793 (934)
.++++ ++++|++++++|||....+..+...+++..++ .++..+|... +... ...... ....+......
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 68999999999999999999999999874322 3333333311 1110 000000 00011111100
Q ss_pred HHhhhhccCCC---CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEE----EEcChh--hHHHHHHHHhhcCC---
Q 002339 794 ASQMIKLERDP---HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVIC----CRVSPK--QKALVTRLVKEGTG--- 861 (934)
Q Consensus 794 ~~~~~~~~~~~---~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~----~r~~p~--qK~~iv~~lk~~~~--- 861 (934)
......+... ..+..+..+...... + .+....+.........+.. ..+.|. .|+..++.+.++.+
T Consensus 99 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 99 -IPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred -CCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 0000000111 122233333321111 1 1122222211111111111 245564 79999998876544
Q ss_pred CEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCc----Eeec
Q 002339 862 KTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD----FSIA 903 (934)
Q Consensus 862 ~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD----~ii~ 903 (934)
..+++|||+.||++|++.|+.||+|++.... ++..|| ++..
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRHQQRIYFAN 220 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhcCCcEEEcC
Confidence 4689999999999999999999999765544 888999 6544
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.53 E-value=5.3e-07 Score=87.77 Aligned_cols=96 Identities=13% Similarity=0.177 Sum_probs=72.7
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCCC
Q 002339 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPH 805 (934)
Q Consensus 726 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (934)
+|+.|++.|+++.|+||+....+..+.+.+|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999887420
Q ss_pred CcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc---CCCEEEEEcCChhhHHHHHHcCc
Q 002339 806 AAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG---TGKTTLAIGDGANDVGMIQEADI 882 (934)
Q Consensus 806 ~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~---~~~~v~aiGDG~ND~~ml~~A~v 882 (934)
+... ..|...+..+.+. ....++++||+.||++|++.|++
T Consensus 71 -----------------------------------~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 113 (154)
T TIGR01670 71 -----------------------------------YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL 113 (154)
T ss_pred -----------------------------------Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 0000 2233333333222 23679999999999999999999
Q ss_pred cEEEcccchhhHHHhCcEeecC
Q 002339 883 GIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 883 GIam~~~e~~~a~~~AD~ii~~ 904 (934)
+++|.+.... .+..||+++..
T Consensus 114 ~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 114 SVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred eEecCCcCHH-HHHhCCEEecC
Confidence 9999654332 78889999975
No 59
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.53 E-value=1.6e-06 Score=93.46 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=41.7
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|.|++.- ...+-+++.++|++|+++|++++++|||....+..+++++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4555531 3356678999999999999999999999999999999999974
No 60
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.52 E-value=8.5e-07 Score=92.17 Aligned_cols=43 Identities=7% Similarity=0.027 Sum_probs=38.6
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+..-+++.++|++|+++|++++++|||....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999963
No 61
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=1.9e-07 Score=89.00 Aligned_cols=129 Identities=19% Similarity=0.311 Sum_probs=88.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce--EEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK--QICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
.+-|++++..+.|++.|.+|.++||--...+.++|.++||...+.. .+.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd--------------------------- 140 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD--------------------------- 140 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---------------------------
Confidence 4679999999999999999999999999999999999999642211 00000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc-CCCEEEEEcCChhhH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDV 874 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~-~~~~v~aiGDG~ND~ 874 (934)
-+|+-+..- . --.-+....|+++++.+++. ..+.++|||||+||.
T Consensus 141 ----------------~~Gk~~gfd----------------~--~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 141 ----------------KDGKYLGFD----------------T--NEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDL 186 (227)
T ss_pred ----------------cCCcccccc----------------c--CCccccCCccHHHHHHHHhCCChheeEEecCCcccc
Confidence 011100000 0 00002234799999999874 347899999999999
Q ss_pred HHHHHcCccEEEcccch-hhHHHhCcEeecCccc
Q 002339 875 GMIQEADIGIGISGVEG-MQAVMASDFSIAQFRF 907 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e~-~~a~~~AD~ii~~~~~ 907 (934)
+|+..|+.=||..+... .+++..|++-+.+|..
T Consensus 187 ea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 187 EAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999888777755322 2267777776665543
No 62
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.42 E-value=3.9e-06 Score=97.40 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=35.7
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
.-+.+.++|++|+++||+++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999985
No 63
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.38 E-value=1.4e-06 Score=87.60 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=80.4
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
.+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999998742
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~ 881 (934)
+|. ..+.|...++.+.+.. ...+++|||+.||+.|++.|+
T Consensus 90 -----------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG 132 (183)
T PRK09484 90 -----------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVG 132 (183)
T ss_pred -----------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 010 1123443444333223 357999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecC------ccchhhhH-hhhchhhh
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQ------FRFLERLL-VVHGHWCY 920 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~------~~~l~~ll-l~~Gr~~~ 920 (934)
++++++..+. .++..||+++.. .+.+..++ ..-|+|-+
T Consensus 133 ~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 133 LSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred CeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 9998854433 267789999962 34455443 35555533
No 64
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.37 E-value=3.6e-06 Score=87.70 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=39.1
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCC
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL 770 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~ 770 (934)
+.++++|++|+++|++++++|||+...+..+.+.+|+.. ...++.||.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa 66 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCc
Confidence 448999999999999999999999999999999999741 234444433
No 65
>PLN02382 probable sucrose-phosphatase
Probab=98.34 E-value=6.7e-06 Score=93.06 Aligned_cols=174 Identities=12% Similarity=0.105 Sum_probs=93.2
Q ss_pred chHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce------EEEEcCC-Cchh-HHHHHHHHHHHh-HHHHH
Q 002339 722 GVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK------QICITAL-NSDS-VGKAAKEAVKDN-ILMQI 791 (934)
Q Consensus 722 ~~~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~------~i~~~~~-~~~~-~~~~~~~~~~~~-~~~~~ 791 (934)
...+++ +++++.|+.++++|||....+..+.++.++..++.- .|..... ..+. ....+....... +...+
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344555 888999999999999999999999999998776422 2222111 1111 111111100001 10111
Q ss_pred HHHHhhhhccC--CCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhcc----CceEEEEcChh--hHHHHHHHHhhcC---
Q 002339 792 TNASQMIKLER--DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC----ASVICCRVSPK--QKALVTRLVKEGT--- 860 (934)
Q Consensus 792 ~~~~~~~~~~~--~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~----~~~i~~r~~p~--qK~~iv~~lk~~~--- 860 (934)
........... ....+..+..+...... +.+.+.+.+......+ ....+..+.|. .|+..++.|.+..
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 10000000011 11122333333322222 1223333342211111 11134567775 5999999887654
Q ss_pred C---CEEEEEcCChhhHHHHHHcC-ccEEEcccchhhHHHh
Q 002339 861 G---KTTLAIGDGANDVGMIQEAD-IGIGISGVEGMQAVMA 897 (934)
Q Consensus 861 ~---~~v~aiGDG~ND~~ml~~A~-vGIam~~~e~~~a~~~ 897 (934)
| ..|++|||+.||++||+.|+ .||+|++.... +++.
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 58999999999999999999 69999765443 5654
No 66
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.33 E-value=5e-06 Score=88.71 Aligned_cols=182 Identities=11% Similarity=0.073 Sum_probs=94.1
Q ss_pred cCCCchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcCc--ccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACSL--LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~gi--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (934)
.+-+++.++|++|++ .|++++++|||....+..+...+++ +..++..+.-.+... ....+.......+...+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~--~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT--HIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe--eeccCChhHHHHHHHHHHHH
Confidence 455789999999998 7999999999999999888876653 222222221110000 00001111111111111111
Q ss_pred HhhhhccCCCCCcEEEEEcChhhhHhhhH---HHHHHHHhhh---hccCceEEEEcChh--hHHHHHHHHhhcCC---CE
Q 002339 795 SQMIKLERDPHAAYALIIEGKTLAYALED---DMKHHFLGLA---VECASVICCRVSPK--QKALVTRLVKEGTG---KT 863 (934)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~---~~~~~~~~~~---~~~~~~i~~r~~p~--qK~~iv~~lk~~~~---~~ 863 (934)
........-.....+++........ ..+ ++...+.... ......-+.++.|. .|+..++.+.+..+ ..
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~ 192 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRT 192 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCe
Confidence 0000000001111222222211110 011 1111111110 01112233455554 79988887765443 68
Q ss_pred EEEEcCChhhHHHHHHc----CccEEEcccchhhHHHhCcEeecCccc
Q 002339 864 TLAIGDGANDVGMIQEA----DIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A----~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
++++||+.||.+|++.+ +.||+|++.. ..|++.|.+-..
T Consensus 193 v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~ 235 (266)
T PRK10187 193 PVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPD 235 (266)
T ss_pred EEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHH
Confidence 99999999999999999 8999997554 358888887443
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.29 E-value=5.1e-06 Score=85.44 Aligned_cols=126 Identities=20% Similarity=0.194 Sum_probs=87.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++++.++.|+++ +++.++||.....+..+...+|+...-...+......
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999998842111111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.+.|. . -..|..|...++.++. .+..++|||||.||+.|.
T Consensus 121 -------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~~~~ 160 (205)
T PRK13582 121 -------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDSYNDTTML 160 (205)
T ss_pred -------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCCHHHHHHH
Confidence 00000 0 0236678888887776 678999999999999999
Q ss_pred HHcCccEEEcccchhhHHHhCcE-eecCccchhhh
Q 002339 878 QEADIGIGISGVEGMQAVMASDF-SIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGIam~~~e~~~a~~~AD~-ii~~~~~l~~l 911 (934)
+.|++|+..+..+.. ....+++ ++.++..|..+
T Consensus 161 ~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 161 GEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999987655432 2335565 66666655444
No 68
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.29 E-value=5.5e-06 Score=86.67 Aligned_cols=42 Identities=7% Similarity=-0.035 Sum_probs=38.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+..-+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999974
No 69
>PTZ00174 phosphomannomutase; Provisional
Probab=98.24 E-value=3.5e-06 Score=89.22 Aligned_cols=57 Identities=25% Similarity=0.355 Sum_probs=43.8
Q ss_pred EEEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHc-CccEEEcccchhhHHHhCc
Q 002339 841 CCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEA-DIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 841 ~~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A-~vGIam~~~e~~~a~~~AD 899 (934)
+..++|. .|+..++.|.+. ...|++||| |.||++||+.| -.|+++++++.. ++..+.
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~~ 242 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILKE 242 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHHH
Confidence 4466664 799999999874 689999999 99999999977 577777666552 554443
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.23 E-value=7.7e-06 Score=83.78 Aligned_cols=118 Identities=22% Similarity=0.205 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.+.|+.|++.|+++.++||.....+..+++.+|+...-...+.......
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~------------------------- 134 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF------------------------- 134 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe-------------------------
Confidence 5899999999999999999999999999999999999996421111111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~ 874 (934)
..+ ..+....|..|..+++.+.+.. ...++++||+.+|+
T Consensus 135 --------------~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 135 --------------IQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred --------------Eec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHH
Confidence 000 0112234566776666654422 35799999999999
Q ss_pred HHHHHcCccEEEcccchhhHHHhCc
Q 002339 875 GMIQEADIGIGISGVEGMQAVMASD 899 (934)
Q Consensus 875 ~ml~~A~vGIam~~~e~~~a~~~AD 899 (934)
+|++.||++++++..... ...++|
T Consensus 177 ~~a~~ag~~~a~~~~~~~-~~~a~~ 200 (201)
T TIGR01491 177 PMFEVADISISLGDEGHA-DYLAKD 200 (201)
T ss_pred HHHHhcCCeEEECCCccc-hhhccc
Confidence 999999999999654331 344444
No 71
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.21 E-value=7.8e-06 Score=84.02 Aligned_cols=167 Identities=18% Similarity=0.220 Sum_probs=86.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC--cccCCceEEEEcCCCc-----hhHHHHHHHHHHHhHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNS-----DSVGKAAKEAVKDNILMQ 790 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~ 790 (934)
++.+.+.++|++|++.|++++++|||....+..+...++ ++..++..+...+... +.....+... ..+...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK--EEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh--hhcCce
Confidence 477899999999999999999999999999999888743 4444444443322111 1111111100 011000
Q ss_pred HHHHHhhhhcc--CCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh-------hccCceEEEEcCh--hhHHHHHHHHhhc
Q 002339 791 ITNASQMIKLE--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLA-------VECASVICCRVSP--KQKALVTRLVKEG 859 (934)
Q Consensus 791 ~~~~~~~~~~~--~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~-------~~~~~~i~~r~~p--~qK~~iv~~lk~~ 859 (934)
+......+... ........+...+..........+...+.... ......-+..+.| ..|+..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 00000000000 00111112222221000011111222221111 0001112334556 4799888888764
Q ss_pred CC---CEEEEEcCChhhHHHHHHcCccEEE
Q 002339 860 TG---KTTLAIGDGANDVGMIQEADIGIGI 886 (934)
Q Consensus 860 ~~---~~v~aiGDG~ND~~ml~~A~vGIam 886 (934)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 43 5699999999999999999999997
No 72
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.16 E-value=8.2e-06 Score=82.86 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=68.3
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhc
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (934)
+++++.|+.++++|++++|+||.....+.++++.+|+.... ++.....+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 67779999999999999999999999999999999986432 11111000
Q ss_pred cCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh-h--HHHHHHHH------hhcCCCEEEEEcCCh
Q 002339 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK-Q--KALVTRLV------KEGTGKTTLAIGDGA 871 (934)
Q Consensus 801 ~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~-q--K~~iv~~l------k~~~~~~v~aiGDG~ 871 (934)
.+ ......+.++. + |...++.+ +. ....++++|||.
T Consensus 141 ------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~~~~iGDs~ 185 (192)
T PF12710_consen 141 ------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDI-DPDRVIAIGDSI 185 (192)
T ss_dssp ------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTH-TCCEEEEEESSG
T ss_pred ------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCC-CCCeEEEEECCH
Confidence 00 01244555554 4 99999988 32 578999999999
Q ss_pred hhHHHHH
Q 002339 872 NDVGMIQ 878 (934)
Q Consensus 872 ND~~ml~ 878 (934)
||++|||
T Consensus 186 ~D~~~lr 192 (192)
T PF12710_consen 186 NDLPMLR 192 (192)
T ss_dssp GGHHHHH
T ss_pred HHHHHhC
Confidence 9999996
No 73
>PLN02954 phosphoserine phosphatase
Probab=98.09 E-value=2e-05 Score=82.26 Aligned_cols=133 Identities=21% Similarity=0.326 Sum_probs=83.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCc--eEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM--KQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
++.|++.++++.|++.|+++.|+||.....+..++..+|+..... ..+.+....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 478999999999999999999999999999999999999852110 000110000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC-CEEEEEcCChhhH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG-KTTLAIGDGANDV 874 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~-~~v~aiGDG~ND~ 874 (934)
.+.|.... ... ..+..|...++.+....+ +.+++|||+.||+
T Consensus 140 ---------------~~~g~~~~--------------------~~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di 182 (224)
T PLN02954 140 ---------------EYAGFDEN--------------------EPT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDL 182 (224)
T ss_pred ---------------cEECccCC--------------------Ccc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHH
Confidence 00000000 000 112347667776654333 5799999999999
Q ss_pred HHHHHcCccE--EEccc-chhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADIGI--GISGV-EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~vGI--am~~~-e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++.+ +.++. ........+|+++.++..|..+
T Consensus 183 ~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 183 EARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 9988855544 44332 1111344689999887665543
No 74
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.06 E-value=1.7e-05 Score=82.05 Aligned_cols=141 Identities=12% Similarity=0.153 Sum_probs=86.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-+++|++.+.++.|++.|+++.|+||.....+..+...++... .++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4789999999999999999999999999988888887764321 1111 00
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceE-EEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI-CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+.++|..+..... . .... +.......|..+++.++. ....++|||||.||+.
T Consensus 118 -------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~~ 170 (214)
T TIGR03333 118 -------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDVE 170 (214)
T ss_pred -------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHHH
Confidence 0111111100000 0 0000 001113579999998886 5678899999999999
Q ss_pred HHHHcCccEEEcc-cchhhHHHhCcEeecCccchhhhHhhh
Q 002339 876 MIQEADIGIGISG-VEGMQAVMASDFSIAQFRFLERLLVVH 915 (934)
Q Consensus 876 ml~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~l~~lll~~ 915 (934)
|++.||++++-.. .+..+-...+.+.+.+|..+...|-.|
T Consensus 171 ~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 171 AAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred HHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 9999999776431 111111222445555666665554333
No 75
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.03 E-value=0.0001 Score=90.51 Aligned_cols=185 Identities=14% Similarity=0.080 Sum_probs=96.4
Q ss_pred CCCchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcC--cccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 719 LQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 719 lr~~~~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
+-+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+..-..... .....++.+...+....
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCC-cchhHHHHHHHHHHHHH
Confidence 56788999999999 699999999999998887765444 344444433322111000000 00001111111111111
Q ss_pred hhhhccCCCCCcEEEEEc--C--hhhhHhhhHHHHHHHHhhhhccCce-----EEEEcCh--hhHHHHHHHHhhc-CCCE
Q 002339 796 QMIKLERDPHAAYALIIE--G--KTLAYALEDDMKHHFLGLAVECASV-----ICCRVSP--KQKALVTRLVKEG-TGKT 863 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~--g--~~l~~~~~~~~~~~~~~~~~~~~~~-----i~~r~~p--~qK~~iv~~lk~~-~~~~ 863 (934)
..............+... . ..+......++..++.......... -+..+.| -.|+..++.+.+. ....
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 111000001111222221 1 1222111223333333322111111 2234555 4799999988763 2368
Q ss_pred EEEEcCChhhHHHHHHc---CccEEEcccchhhHHHhCcEeecCccchh
Q 002339 864 TLAIGDGANDVGMIQEA---DIGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 864 v~aiGDG~ND~~ml~~A---~vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
++++||+.||.+|++.+ +.||+|++. ..+|+|.+.+-..+.
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~eV~ 717 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQREVR 717 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHHHH
Confidence 99999999999999997 567777553 347999998754433
No 76
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.99 E-value=1.3e-05 Score=74.28 Aligned_cols=97 Identities=11% Similarity=0.203 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhhhhccCCC
Q 002339 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDP 804 (934)
Q Consensus 725 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (934)
-.|+.|.++||++.++|||+-.-+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 58999999999999999999999999999999842
Q ss_pred CCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcC---CCEEEEEcCChhhHHHHHHcC
Q 002339 805 HAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVGMIQEAD 881 (934)
Q Consensus 805 ~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~---~~~v~aiGDG~ND~~ml~~A~ 881 (934)
++ .=..+|....+.|.... -..|+++||-.||.|+|+..+
T Consensus 77 -----------------------------------~~--qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vG 119 (170)
T COG1778 77 -----------------------------------LY--QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVG 119 (170)
T ss_pred -----------------------------------ee--echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcC
Confidence 11 11235554455444322 367999999999999999999
Q ss_pred ccEEEcccchhhHHHhCcEeecC
Q 002339 882 IGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 882 vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
++++..++... .++.|||++..
T Consensus 120 ls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 120 LSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred CcccccccCHH-HHHhhHhhhhc
Confidence 99999665543 88899999874
No 77
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.88 E-value=4.6e-05 Score=78.14 Aligned_cols=112 Identities=12% Similarity=0.007 Sum_probs=77.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
..++.+++.+.|+.++++|++++++||-....+..+++.+|+..--...+......
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 55789999999999999999999999999999999999999842100000000000
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~N 872 (934)
..+|... .-.+.++.|...++.+.+..+ ..++++||+.+
T Consensus 141 ---------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~ 182 (202)
T TIGR01490 141 ---------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSIS 182 (202)
T ss_pred ---------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcc
Confidence 1111100 001345677776666543233 47899999999
Q ss_pred hHHHHHHcCccEEEccc
Q 002339 873 DVGMIQEADIGIGISGV 889 (934)
Q Consensus 873 D~~ml~~A~vGIam~~~ 889 (934)
|++|++.|+.+++++..
T Consensus 183 D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 183 DLPLLSLVGHPYVVNPD 199 (202)
T ss_pred cHHHHHhCCCcEEeCCC
Confidence 99999999999998643
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.84 E-value=7.3e-05 Score=74.81 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=37.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+++++.+.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999875
No 79
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.80 E-value=7.3e-05 Score=70.79 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=39.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
..++.+++++.|++|++.|++++++||+....+......+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 4488999999999999999999999999999999999999874
No 80
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.78 E-value=8.6e-05 Score=75.06 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=75.0
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..++. +...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~-~~~~------------------------- 124 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYS-NPAS------------------------- 124 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEec-cCce-------------------------
Confidence 47899999999999999999999999999999998888887532112221 1000
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE-cChhhHHHHHHHHhhcC-CCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT-GKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~lk~~~-~~~v~aiGDG~ND~ 874 (934)
.++...... +. . ....|.. .....|..+++.++. . ...+++||||.||+
T Consensus 125 ---------------~~~~g~~~~--------~~---~--~~~~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 125 ---------------FDNDGRHIV--------WP---H--HCHGCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVTDV 175 (188)
T ss_pred ---------------ECCCCcEEE--------ec---C--CCCccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcchh
Confidence 000000000 00 0 0001111 122358889998886 4 78899999999999
Q ss_pred HHHHHcCccEE
Q 002339 875 GMIQEADIGIG 885 (934)
Q Consensus 875 ~ml~~A~vGIa 885 (934)
.|.+.||+-.|
T Consensus 176 ~aa~~~d~~~a 186 (188)
T TIGR01489 176 CPAKLSDVVFA 186 (188)
T ss_pred chHhcCCcccc
Confidence 99999987543
No 81
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.77 E-value=0.00013 Score=75.91 Aligned_cols=136 Identities=12% Similarity=0.161 Sum_probs=82.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+++||+.+.|+.|++.|+++.|+||-....+..+.+.+ +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999998888888887 532 12221110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEE-EcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
..+|..+..... + .....+ ......|..+++.++. ....+++||||.||+.|
T Consensus 123 -------------~~~~~~~~~~kp-~------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~a 175 (219)
T PRK09552 123 -------------DFSGEYITITWP-H------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGDSITDLEA 175 (219)
T ss_pred -------------EecCCeeEEecc-C------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeCCHHHHHH
Confidence 011111000000 0 000000 0012347788888876 56689999999999999
Q ss_pred HHHcCccEEEcc-cchhhHHHhCcEeecCccchhhh
Q 002339 877 IQEADIGIGISG-VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 877 l~~A~vGIam~~-~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
.+.||+.++-.. .+.-.....+.+.+.+|..+...
T Consensus 176 a~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 176 AKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 999999776321 01100112255556666655444
No 82
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.66 E-value=0.00025 Score=74.05 Aligned_cols=123 Identities=22% Similarity=0.265 Sum_probs=82.4
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
-++.|++.+.++.|++.|++++++||.....+..+.+.+|+...-..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 138 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--------------------------------- 138 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE---------------------------------
Confidence 46889999999999999999999999999999889888887432111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcCh--hhHHHHHHHHhhcCCCEEEEEcCChhhH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTGKTTLAIGDGANDV 874 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~lk~~~~~~v~aiGDG~ND~ 874 (934)
++.+.. + .+..| +--..+++.+.. ....+++|||+.+|+
T Consensus 139 --------------~~~~~~-----------------------~-~~~kp~~~~~~~~~~~~~~-~~~~~i~igD~~~Di 179 (226)
T PRK13222 139 --------------VIGGDS-----------------------L-PNKKPDPAPLLLACEKLGL-DPEEMLFVGDSRNDI 179 (226)
T ss_pred --------------EEcCCC-----------------------C-CCCCcChHHHHHHHHHcCC-ChhheEEECCCHHHH
Confidence 111100 0 01112 111223333332 456899999999999
Q ss_pred HHHHHcCc-cEEEc-ccc--hhhHHHhCcEeecCccchhhh
Q 002339 875 GMIQEADI-GIGIS-GVE--GMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 875 ~ml~~A~v-GIam~-~~e--~~~a~~~AD~ii~~~~~l~~l 911 (934)
.|.+.|++ +|++. |.. .......+|+++.++..|...
T Consensus 180 ~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 180 QAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred HHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 99999998 66663 221 111345789999887776655
No 83
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.57 E-value=0.00048 Score=71.51 Aligned_cols=126 Identities=21% Similarity=0.185 Sum_probs=85.7
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (934)
...+-|++++++..|+++|++..++|++....+..+.+..|+...-..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 557889999999999999999999999999999999999998653222111
Q ss_pred hhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
+... ....-.|.....+++.+.. ..+.++||||..+|+.
T Consensus 138 ------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VGDs~~Di~ 176 (220)
T COG0546 138 ------------------GDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVGDSLNDIL 176 (220)
T ss_pred ------------------CCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEECCCHHHHH
Confidence 0000 0000123333444444443 2347999999999999
Q ss_pred HHHHcCcc-EEE--ccc-chhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIG-IGI--SGV-EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vG-Iam--~~~-e~~~a~~~AD~ii~~~~~l~~l 911 (934)
|=+.|++. |++ +.. ...-....+|+++.+...|...
T Consensus 177 aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 177 AAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred HHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999944 344 322 2222455699999987776554
No 84
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.57 E-value=0.00062 Score=71.91 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=48.1
Q ss_pred EcChhhHHHHHHHHhhcCC---CEEEEEcCChhhHHHHHHc--------CccEEEcccchhhHHHhCcEeecCccchhhh
Q 002339 843 RVSPKQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEA--------DIGIGISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 843 r~~p~qK~~iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A--------~vGIam~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+-.+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.|... . .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g-~--~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG-S--KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC-C--cCCCceEeCCCHHHHHHH
Confidence 3445589988887765433 5799999999999999999 467777411 1 456799999886665544
No 85
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.55 E-value=0.0004 Score=71.37 Aligned_cols=124 Identities=20% Similarity=0.205 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++|+.|+++|+++.++||.....+..+....|+...-..++.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~------------------------------- 123 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIG------------------------------- 123 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEe-------------------------------
Confidence 6789999999999999999999999988888888888887432111110
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+... ...+-.|+-=..+++.+.- ....+++|||+.+|+.+-
T Consensus 124 ----------------~~~~----------------------~~~KP~~~~~~~~~~~~~~-~~~~~l~igD~~~Di~aA 164 (205)
T TIGR01454 124 ----------------SDEV----------------------PRPKPAPDIVREALRLLDV-PPEDAVMVGDAVTDLASA 164 (205)
T ss_pred ----------------cCcC----------------------CCCCCChHHHHHHHHHcCC-ChhheEEEcCCHHHHHHH
Confidence 0000 0000111111222333332 346799999999999999
Q ss_pred HHcCccE-EEc-c--cchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GIS-G--VEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~-~--~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.. ++. | .........+|+++.++..|..+
T Consensus 165 ~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 165 RAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred HHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 9999864 442 2 22222456799999887665543
No 86
>PLN02423 phosphomannomutase
Probab=97.49 E-value=0.0007 Score=71.42 Aligned_cols=50 Identities=22% Similarity=0.376 Sum_probs=41.0
Q ss_pred EEEEcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHH-cCccEEEcccch
Q 002339 840 ICCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQE-ADIGIGISGVEG 891 (934)
Q Consensus 840 i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~-A~vGIam~~~e~ 891 (934)
.+..+.|. .|+..++.|+ ....|+|||| |.||.+||+. --.|+.+.+-+.
T Consensus 179 ~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 35566664 7999999998 5789999999 8999999997 557899987654
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.46 E-value=0.00063 Score=73.08 Aligned_cols=120 Identities=18% Similarity=0.149 Sum_probs=79.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.++.+++.++|+.|+++|++++|+||.....+..+....|+...-..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--------------------------------- 146 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--------------------------------- 146 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE---------------------------------
Confidence 46789999999999999999999999988888877777776321111
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhc---CCCEEEEEcCCh
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEG---TGKTTLAIGDGA 871 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~---~~~~v~aiGDG~ 871 (934)
++++...+..| ...++.+.+. ....+++|||+.
T Consensus 147 ------------------------------------------i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~ 184 (272)
T PRK13223 147 ------------------------------------------IIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSR 184 (272)
T ss_pred ------------------------------------------EEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCH
Confidence 11221122222 2222222221 346799999999
Q ss_pred hhHHHHHHcCcc-EEE-ccc--chhhHHHhCcEeecCccchhhh
Q 002339 872 NDVGMIQEADIG-IGI-SGV--EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 872 ND~~ml~~A~vG-Iam-~~~--e~~~a~~~AD~ii~~~~~l~~l 911 (934)
||+.|.+.|++. +++ .|. ........+|+++.+...|..+
T Consensus 185 ~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 185 SDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred HHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 999999999984 455 232 1111334799999877666655
No 88
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.39 E-value=0.0055 Score=75.55 Aligned_cols=201 Identities=11% Similarity=0.078 Sum_probs=97.9
Q ss_pred CceEEEeeeecccCCCchHHHHHHH-HhcCCeEEEEcCCCHHHHHHHHHH---cCcccCCceEEEEcCCCc-hhHHHHHH
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKL-AQAGLKIWVLTGDKMETAINIGFA---CSLLRQGMKQICITALNS-DSVGKAAK 780 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l-~~aGIkv~mlTGD~~~ta~~ia~~---~gi~~~~~~~i~~~~~~~-~~~~~~~~ 780 (934)
|.|++-.....-.+-+++.++|++| ++.|+.|+++|||...+....... ++++.+++..+...+... +.......
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4455433222224557889999997 778999999999999998887754 345555554443322210 00000001
Q ss_pred HHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhh----hHhhhHHHHHHHHhhhhccCc-----eEEEEcCh--hhH
Q 002339 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL----AYALEDDMKHHFLGLAVECAS-----VICCRVSP--KQK 849 (934)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l----~~~~~~~~~~~~~~~~~~~~~-----~i~~r~~p--~qK 849 (934)
...++.................-+.....++..-... .....+++..++......... .-+.++.| -.|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 1111111000000000000000111233333332211 111112333333322211110 11223444 369
Q ss_pred HHHHHHHhhc---CC---CEEEEEcCChhhHHHHHHcC--------------ccEEEcccchhhHHHhCcEeecCccchh
Q 002339 850 ALVTRLVKEG---TG---KTTLAIGDGANDVGMIQEAD--------------IGIGISGVEGMQAVMASDFSIAQFRFLE 909 (934)
Q Consensus 850 ~~iv~~lk~~---~~---~~v~aiGDG~ND~~ml~~A~--------------vGIam~~~e~~~a~~~AD~ii~~~~~l~ 909 (934)
+..++.+.+. .| ..++++||+.||..|++.++ ++|.++..+ ..|.|-+.+-..+.
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~-----S~A~y~L~d~~eV~ 838 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP-----SKAKYYLDDTAEIV 838 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC-----ccCeEecCCHHHHH
Confidence 9888887521 22 47999999999999999886 344444332 35667777755544
Q ss_pred hh
Q 002339 910 RL 911 (934)
Q Consensus 910 ~l 911 (934)
.+
T Consensus 839 ~l 840 (854)
T PLN02205 839 RL 840 (854)
T ss_pred HH
Confidence 44
No 89
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.35 E-value=0.0013 Score=69.40 Aligned_cols=160 Identities=14% Similarity=0.193 Sum_probs=83.0
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCcccCC------ceEEEEcCCCchhHHHHHHHHHHH-----hHHHHHHHHHhhh
Q 002339 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQG------MKQICITALNSDSVGKAAKEAVKD-----NILMQITNASQMI 798 (934)
Q Consensus 730 l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~------~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 798 (934)
..+.++.++++|||+...+..+.++.++..++ +..|.. +.... ....+...... .+...+.......
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~~~~-~d~~w~~~i~~~w~~~~v~~~l~~~~~l~ 108 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GENWQ-PDEEWQAHIDERWDRERVEEILAELPGLR 108 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SSTTE-E-HHHHHHHHTT--HHHHHHHHHCHCCEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cCCCc-ChHHHHHHHHhcCChHHHHHHHHHhhCcc
Confidence 44778999999999999999999999976543 122222 11111 11122222211 1111111111111
Q ss_pred hccCC--CCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCce----EEEEcCh--hhHHHHHHHHhhcCC---CEEEEE
Q 002339 799 KLERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVKEGTG---KTTLAI 867 (934)
Q Consensus 799 ~~~~~--~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~lk~~~~---~~v~ai 867 (934)
..... ...+....++.......+ +++...+......++.+ -+..+.| ..|...|+.++...+ ..|+++
T Consensus 109 ~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 109 PQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred cCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 11111 122344445554433322 23444333322222211 2234555 379999999987533 578999
Q ss_pred cCChhhHHHHHHcCccEEEcccchh
Q 002339 868 GDGANDVGMIQEADIGIGISGVEGM 892 (934)
Q Consensus 868 GDG~ND~~ml~~A~vGIam~~~e~~ 892 (934)
||+.||.+||..++-||.+++.+..
T Consensus 188 GDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 9999999999999999999876653
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.33 E-value=0.00097 Score=68.90 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=38.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 126 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK 126 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh
Confidence 578999999999999999999999999988888888888753
No 91
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.25 E-value=0.0024 Score=65.59 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=75.8
Q ss_pred cCCCchHHHHH-HHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCID-KLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I~-~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.+.|++.++|+ .++++|++++|+|+-....+.++|+..++.... .+++.+-.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999886664421 23322110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
+.+|.. +..-.|..++|..-++..-........+-||+.||.||
T Consensus 147 --------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pm 190 (210)
T TIGR01545 147 --------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPL 190 (210)
T ss_pred --------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHH
Confidence 001100 01122556788765554322133456799999999999
Q ss_pred HHHcCccEEEcccc
Q 002339 877 IQEADIGIGISGVE 890 (934)
Q Consensus 877 l~~A~vGIam~~~e 890 (934)
|+.||..++++..+
T Consensus 191 L~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 191 LAFCEHRWRVSKRG 204 (210)
T ss_pred HHhCCCcEEECcch
Confidence 99999999997654
No 92
>PRK08238 hypothetical protein; Validated
Probab=97.20 E-value=0.002 Score=74.23 Aligned_cols=97 Identities=14% Similarity=0.067 Sum_probs=71.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++++++.+.|++++++|++++++|+-....+..+++.+|+.+ .++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~--------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT--------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc---------------------------
Confidence 478999999999999999999999999999999999999832 22211100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
.++.|+.|...+..... .+.+.++||..+|++|+
T Consensus 122 --------------------------------------------~~~kg~~K~~~l~~~l~--~~~~~yvGDS~~Dlp~~ 155 (479)
T PRK08238 122 --------------------------------------------TNLKGAAKAAALVEAFG--ERGFDYAGNSAADLPVW 155 (479)
T ss_pred --------------------------------------------cccCCchHHHHHHHHhC--ccCeeEecCCHHHHHHH
Confidence 02445567544332211 13367889999999999
Q ss_pred HHcCccEEEcccc
Q 002339 878 QEADIGIGISGVE 890 (934)
Q Consensus 878 ~~A~vGIam~~~e 890 (934)
+.|+-.++++...
T Consensus 156 ~~A~~av~Vn~~~ 168 (479)
T PRK08238 156 AAARRAIVVGASP 168 (479)
T ss_pred HhCCCeEEECCCH
Confidence 9999999997554
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.19 E-value=0.0017 Score=67.97 Aligned_cols=124 Identities=18% Similarity=0.136 Sum_probs=79.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.|++.+.++.|++.|+++.++|+.+...+..+-...|+...-..
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 140 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAV---------------------------------- 140 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccE----------------------------------
Confidence 5789999999999999999999999988877777777776431100
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.+... -...-.|+-=..+++.+.- ....+++|||+.+|+.|-
T Consensus 141 -------------i~~~~~~----------------------~~~KP~p~~~~~~~~~l~~-~p~~~l~IGDs~~Di~aA 184 (229)
T PRK13226 141 -------------LIGGDTL----------------------AERKPHPLPLLVAAERIGV-APTDCVYVGDDERDILAA 184 (229)
T ss_pred -------------EEecCcC----------------------CCCCCCHHHHHHHHHHhCC-ChhhEEEeCCCHHHHHHH
Confidence 1111000 0000111111233344432 457899999999999999
Q ss_pred HHcCccE-EEc-cc---chhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GIS-GV---EGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~-~~---e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++.. ++. |. +.......+|+++.++..|...
T Consensus 185 ~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 185 RAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred HHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999875 442 22 1111234699999888776554
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.19 E-value=0.0016 Score=67.41 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=37.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++|+.|+++|+++.++||.....+..+....|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 367999999999999999999999999988888888888753
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.16 E-value=0.0024 Score=67.97 Aligned_cols=124 Identities=10% Similarity=0.101 Sum_probs=80.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.+++.++|+.|+++|+++.|+|+.....+..+-..+|+...-..++.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~------------------------------- 157 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLA------------------------------- 157 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEe-------------------------------
Confidence 5689999999999999999999999999988888888887542212111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
+.... ...-.|+-=..+++.+.- ....+++|||..+|+.+=
T Consensus 158 ----------------~~d~~----------------------~~KP~Pe~~~~a~~~l~~-~p~~~l~IgDs~~Di~aA 198 (260)
T PLN03243 158 ----------------AEDVY----------------------RGKPDPEMFMYAAERLGF-IPERCIVFGNSNSSVEAA 198 (260)
T ss_pred ----------------cccCC----------------------CCCCCHHHHHHHHHHhCC-ChHHeEEEcCCHHHHHHH
Confidence 11000 000011111122233332 346799999999999999
Q ss_pred HHcCccE-EEcccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIGI-GISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vGI-am~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++-+ ++.+.........+|+++.+++.|...
T Consensus 199 ~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 199 HDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 9999854 554433222344689999887766544
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.10 E-value=0.0039 Score=66.74 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=38.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++|+.|++.|+++.|+|+.....+..+-+.+|+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~ 183 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS 183 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 577999999999999999999999999999999988888853
No 97
>PLN02580 trehalose-phosphatase
Probab=97.06 E-value=0.013 Score=65.00 Aligned_cols=67 Identities=21% Similarity=0.225 Sum_probs=48.1
Q ss_pred EEcCh---hhHHHHHHHHhhcCC---C---EEEEEcCChhhHHHHHH-----cCccEEEcccchhhHHHhCcEeecCccc
Q 002339 842 CRVSP---KQKALVTRLVKEGTG---K---TTLAIGDGANDVGMIQE-----ADIGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 842 ~r~~p---~qK~~iv~~lk~~~~---~---~v~aiGDG~ND~~ml~~-----A~vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.++.| -+|+..|+.+.+..+ . .+++|||+.||..|++. +++||+|++... .-.|+|-|.+-..
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 45555 389999998876443 1 24899999999999996 588998864322 2268899888655
Q ss_pred hhhh
Q 002339 908 LERL 911 (934)
Q Consensus 908 l~~l 911 (934)
+..+
T Consensus 369 V~~~ 372 (384)
T PLN02580 369 VMEF 372 (384)
T ss_pred HHHH
Confidence 5554
No 98
>PRK11590 hypothetical protein; Provisional
Probab=97.05 E-value=0.0055 Score=63.15 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=76.9
Q ss_pred cCCCchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHh
Q 002339 718 KLQKGVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (934)
Q Consensus 718 ~lr~~~~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (934)
.+.|++.++| +.+++.|++++++|+-....+..++..+|+.. ...+++..-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999998632 2223322110
Q ss_pred hhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHH
Q 002339 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (934)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~m 876 (934)
...+|.- ....+..+.|..-++..-........+-||+.||.||
T Consensus 148 -------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pm 191 (211)
T PRK11590 148 -------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPL 191 (211)
T ss_pred -------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHH
Confidence 0111210 1122556788765554321134566799999999999
Q ss_pred HHHcCccEEEcccch
Q 002339 877 IQEADIGIGISGVEG 891 (934)
Q Consensus 877 l~~A~vGIam~~~e~ 891 (934)
|+.|+-.++++..+.
T Consensus 192 L~~a~~~~~vnp~~~ 206 (211)
T PRK11590 192 LYFCQHRWRVTPRGE 206 (211)
T ss_pred HHhCCCCEEECccHH
Confidence 999999999976553
No 99
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.04 E-value=0.0022 Score=66.71 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=38.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
-++-|++.++|+.|++.|+++.++||.....+..+.+.+|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999998888888888754
No 100
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.93 E-value=0.0059 Score=59.42 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.5
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+|.+.+++++++++++++|++++++|||....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
No 101
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.93 E-value=0.0034 Score=66.26 Aligned_cols=47 Identities=15% Similarity=0.240 Sum_probs=41.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCce
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK 763 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 763 (934)
-+++||+.+.++.|++.|+++.++||-....+..+.+++|+......
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 35799999999999999999999999999999999999998765543
No 102
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.91 E-value=0.0048 Score=64.05 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=38.6
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.++.+|+.+.|+.|++.|+++.++||-....+..+...+|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478999999999999999999999999999999888888875
No 103
>PRK11587 putative phosphatase; Provisional
Probab=96.85 E-value=0.0047 Score=64.04 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=73.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.||+.++|+.|+++|+++.++|+.....+...-...|+... ..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~---------------------------------- 127 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV---------------------------------- 127 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE----------------------------------
Confidence 5789999999999999999999999877666555555555211 11
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChh--hHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK--QKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
++++... .+.-|. -=..+.+.+.- ....+++|||..+|+.
T Consensus 128 -------------i~~~~~~------------------------~~~KP~p~~~~~~~~~~g~-~p~~~l~igDs~~di~ 169 (218)
T PRK11587 128 -------------FVTAERV------------------------KRGKPEPDAYLLGAQLLGL-APQECVVVEDAPAGVL 169 (218)
T ss_pred -------------EEEHHHh------------------------cCCCCCcHHHHHHHHHcCC-CcccEEEEecchhhhH
Confidence 1111000 001121 11122222322 3478999999999999
Q ss_pred HHHHcCcc-EEEcccchhhHHHhCcEeecCccch
Q 002339 876 MIQEADIG-IGISGVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 876 ml~~A~vG-Iam~~~e~~~a~~~AD~ii~~~~~l 908 (934)
+=+.|++- |++...........+|+++.+++.|
T Consensus 170 aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 170 SGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred HHHHCCCEEEEECCCCchhhhccCCEEecchhhe
Confidence 99999985 5664322211344689988876654
No 104
>PLN03017 trehalose-phosphatase
Probab=96.84 E-value=0.059 Score=59.24 Aligned_cols=197 Identities=13% Similarity=0.106 Sum_probs=98.9
Q ss_pred CceEEEeeeecc--cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchh-----H---
Q 002339 706 DLILVGATAVED--KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDS-----V--- 775 (934)
Q Consensus 706 dl~~lG~i~i~D--~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~-----~--- 775 (934)
|.||+-++.-.| .+-+++.++|++|. .|++++++|||....+..+. ++ .+..++..+|..... .
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~ 192 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHK 192 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceecc
Confidence 666665554334 37789999999999 78999999999999988873 22 122333333321100 0
Q ss_pred -------HHHH--HHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhh--------hccCc
Q 002339 776 -------GKAA--KEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA--------VECAS 838 (934)
Q Consensus 776 -------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~--------~~~~~ 838 (934)
.... .....+.+...+...........-+...+++.+.-.........++..++.... ...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~Gkk 272 (366)
T PLN03017 193 RVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRK 272 (366)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCe
Confidence 0000 000011111111111111111111223344443322221111112222222111 11223
Q ss_pred eEEEEcC-hhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcC-----ccEEEcccchhhHHHhCcEeecCcc
Q 002339 839 VICCRVS-PKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEAD-----IGIGISGVEGMQAVMASDFSIAQFR 906 (934)
Q Consensus 839 ~i~~r~~-p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~-----vGIam~~~e~~~a~~~AD~ii~~~~ 906 (934)
++-.|-. .-+|+..++.+.+..+ ..++++||...|-.|++... +||.++..+. ...|+|.|.+-.
T Consensus 273 VlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~ 349 (366)
T PLN03017 273 VFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPS 349 (366)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHH
Confidence 3333322 2489999998876432 36899999999999999763 4444442222 247889998755
Q ss_pred chhhh
Q 002339 907 FLERL 911 (934)
Q Consensus 907 ~l~~l 911 (934)
.+..+
T Consensus 350 eV~~f 354 (366)
T PLN03017 350 EVMDF 354 (366)
T ss_pred HHHHH
Confidence 54444
No 105
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.72 E-value=0.0099 Score=65.89 Aligned_cols=122 Identities=11% Similarity=0.159 Sum_probs=80.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
.+.+|+.+.|+.|+++|+++.++|+.....+..+-...||...-..++
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv-------------------------------- 263 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIV-------------------------------- 263 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEE--------------------------------
Confidence 467999999999999999999999999999999988888854221111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhH--HHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK--ALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+... .+--|.-. ...++.+.- ....+++|||...|+.
T Consensus 264 ---------------~sddv------------------------~~~KP~Peifl~A~~~lgl-~Peecl~IGDS~~DIe 303 (381)
T PLN02575 264 ---------------AAEDV------------------------YRGKPDPEMFIYAAQLLNF-IPERCIVFGNSNQTVE 303 (381)
T ss_pred ---------------ecCcC------------------------CCCCCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHH
Confidence 11100 00112111 122333332 4578999999999999
Q ss_pred HHHHcCccE-EEcccchhhHHHhCcEeecCccchhhh
Q 002339 876 MIQEADIGI-GISGVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 876 ml~~A~vGI-am~~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+-+.|++-. ++.+.........||+++.++..|...
T Consensus 304 AAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 304 AAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred HHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHH
Confidence 999999865 554322211223589999888776433
No 106
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.66 E-value=0.01 Score=63.17 Aligned_cols=42 Identities=26% Similarity=0.182 Sum_probs=37.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++-||+.+.|+.|+++|+++.++||.....+..+-+.+|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999998888888887754
No 107
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.63 E-value=0.0012 Score=53.60 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=38.5
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHhcc
Q 002339 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (934)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~~~ 95 (934)
..++.+||.|.+..++...++ +.+++||.+|+.++++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 467889999999988754443 889999999999999999999886
No 108
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.60 E-value=0.014 Score=67.92 Aligned_cols=121 Identities=14% Similarity=0.155 Sum_probs=80.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
++.||+.+.|+.|++.|+++.++|+.....+..+...+|+...-..++
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~-------------------------------- 377 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETF-------------------------------- 377 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeE--------------------------------
Confidence 678999999999999999999999999999999988888754211111
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml 877 (934)
++.... ..-.|+ -+...+++.....+++|||+.+|+.+-
T Consensus 378 ---------------~~d~v~-----------------------~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aA 416 (459)
T PRK06698 378 ---------------SIEQIN-----------------------SLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAA 416 (459)
T ss_pred ---------------ecCCCC-----------------------CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHH
Confidence 110000 001121 122222222336799999999999999
Q ss_pred HHcCcc-EEEc-ccchhhHHHhCcEeecCccchhhh
Q 002339 878 QEADIG-IGIS-GVEGMQAVMASDFSIAQFRFLERL 911 (934)
Q Consensus 878 ~~A~vG-Iam~-~~e~~~a~~~AD~ii~~~~~l~~l 911 (934)
+.|++- |++. +.........+|+++.+++.|..+
T Consensus 417 k~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 417 KDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 999984 4552 221111234689999888777665
No 109
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.52 E-value=0.015 Score=61.68 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=38.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 467999999999999999999999999999998888888854
No 110
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.52 E-value=0.0066 Score=63.12 Aligned_cols=41 Identities=17% Similarity=0.146 Sum_probs=35.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC----CHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD----KMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD----~~~ta~~ia~~~gi~ 758 (934)
.+.+++++.|+.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999999 667899999889984
No 111
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.46 E-value=0.014 Score=59.33 Aligned_cols=44 Identities=20% Similarity=0.090 Sum_probs=39.0
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.+++.++++++|+.|++.|+++.++||.....+..+.+.+|+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 147 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI 147 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh
Confidence 45577788999999999999999999999999999999998853
No 112
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.44 E-value=0.01 Score=61.68 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.3
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCC----HHHHHHHHHHcCc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK----METAINIGFACSL 757 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~----~~ta~~ia~~~gi 757 (934)
-.+.+++++.|+.|++.|+++.++|||. ..++..+.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3467889999999999999999999985 4588888887888
No 113
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.39 E-value=0.0011 Score=54.60 Aligned_cols=44 Identities=32% Similarity=0.396 Sum_probs=36.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHh
Q 002339 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (934)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~ 93 (934)
...|+.+||+|.+...+...++ +.++++|.+|++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 3467889999999766665554 8999999999999999999885
No 114
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.37 E-value=0.016 Score=62.71 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=32.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
++.||+.+.|+.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877766554443
No 115
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.37 E-value=0.027 Score=60.43 Aligned_cols=41 Identities=24% Similarity=0.128 Sum_probs=35.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++-||+.++|+.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777776666654
No 116
>PRK06769 hypothetical protein; Validated
Probab=96.29 E-value=0.022 Score=56.60 Aligned_cols=41 Identities=22% Similarity=0.245 Sum_probs=31.8
Q ss_pred cCceEEEeeeecc----cCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 705 KDLILVGATAVED----KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 705 ~dl~~lG~i~i~D----~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
+|.++.|-..+.+ ++.|+++++|+.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4666655544442 3679999999999999999999998753
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.15 E-value=0.027 Score=58.44 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=36.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++|+-....+......+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999998887777777777764
No 118
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.11 E-value=0.021 Score=53.94 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=34.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCC--------HHHHHHHHHHcCc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK--------METAINIGFACSL 757 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~--------~~ta~~ia~~~gi 757 (934)
-++.+++.++|+.|+++|++++++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6666667777666
No 119
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.09 E-value=0.017 Score=63.16 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=40.6
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
..+++.+++.++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999998888774
No 120
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.98 E-value=0.037 Score=54.83 Aligned_cols=58 Identities=24% Similarity=0.331 Sum_probs=42.6
Q ss_pred hHHHHHHHHhhcCC--CEEEEEcCChhhHHHHHHcC----ccEEEcccchhhHHHhCcEeecCccc
Q 002339 848 QKALVTRLVKEGTG--KTTLAIGDGANDVGMIQEAD----IGIGISGVEGMQAVMASDFSIAQFRF 907 (934)
Q Consensus 848 qK~~iv~~lk~~~~--~~v~aiGDG~ND~~ml~~A~----vGIam~~~e~~~a~~~AD~ii~~~~~ 907 (934)
.|+++++.+....+ ...+.+||+..|+.||+.+. +.|+.+|++- |...||+.+..-..
T Consensus 191 ~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 191 EKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred chhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 46666666554322 23588999999999999985 4456688888 99999998876443
No 121
>PLN02940 riboflavin kinase
Probab=95.95 E-value=0.029 Score=63.25 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=33.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH-HcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF-ACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~-~~gi~ 758 (934)
++.+|+.+.++.|++.|+++.|+|+.....+..... ..|+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH
Confidence 467999999999999999999999998877765544 45553
No 122
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.92 E-value=0.042 Score=55.03 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=35.7
Q ss_pred CCCEEEEEcCChhhHHHHHHcCccE-EE-cccchh-hHHHhC--cEeecCccchhhh
Q 002339 860 TGKTTLAIGDGANDVGMIQEADIGI-GI-SGVEGM-QAVMAS--DFSIAQFRFLERL 911 (934)
Q Consensus 860 ~~~~v~aiGDG~ND~~ml~~A~vGI-am-~~~e~~-~a~~~A--D~ii~~~~~l~~l 911 (934)
....+++|||+.+|+.+-+.|++.. ++ .|.... .....+ |+++.++..+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3478999999999999999999854 44 232211 122345 8888887766655
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.82 E-value=0.042 Score=57.20 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=35.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.+|+.+.++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998887777766667764
No 124
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.76 E-value=0.044 Score=55.76 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|++++++|+-+...+..+...+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 47799999999999999999999998888888888888874
No 125
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.69 E-value=0.029 Score=55.36 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=40.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++.+++.+.|+.|++.|++++++|+.....+....+.+|+..
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~ 118 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD 118 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc
Confidence 55788999999999999999999999999999999999998863
No 126
>PLN02811 hydrolase
Probab=95.66 E-value=0.038 Score=57.36 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=33.9
Q ss_pred CCEEEEEcCChhhHHHHHHcCccE-EEc-ccchhhHHHhCcEeecCccch
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGI-GIS-GVEGMQAVMASDFSIAQFRFL 908 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGI-am~-~~e~~~a~~~AD~ii~~~~~l 908 (934)
...+++|||+..|+.+-+.|++-. ++. +.........+|+++.++..+
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 467999999999999999999865 442 322211234688888776543
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.64 E-value=0.16 Score=50.50 Aligned_cols=37 Identities=8% Similarity=0.137 Sum_probs=32.5
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 722 ~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888864
No 128
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.57 E-value=0.068 Score=52.75 Aligned_cols=51 Identities=22% Similarity=0.175 Sum_probs=41.8
Q ss_pred eEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcCcc
Q 002339 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACSLL 758 (934)
Q Consensus 708 ~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~gi~ 758 (934)
......+-+-++.|++.+.++.|+++|+++.++|+- ....+..+...+|+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344555555678999999999999999999999976 788888887777764
No 129
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.35 E-value=0.08 Score=52.91 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=33.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988776 4444446764
No 130
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.24 E-value=0.048 Score=54.69 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=31.0
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 6789999999999999999999997532 34455666653
No 131
>PRK09449 dUMP phosphatase; Provisional
Probab=95.24 E-value=0.089 Score=54.70 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=33.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++|+.|+ +|+++.++|+.....+...-..+|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 36799999999999 68999999998877777766677764
No 132
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.21 E-value=0.071 Score=55.34 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=36.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++.+++.+.|+.|++. ++++++|+-....+..+.+.+|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5789999999999999 9999999988888888888888753
No 133
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.15 E-value=0.052 Score=54.47 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=33.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-++.||+.++|+.|++.|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 468899999999999999999999987 5566666677764
No 134
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.84 E-value=0.089 Score=50.64 Aligned_cols=110 Identities=14% Similarity=0.197 Sum_probs=70.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHHHHHHHHHhh
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (934)
+++|+-++.++.+++.+++++++||-...-..++-...+ ..+ .+.+++-..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke-~i~~idi~s-------------------------- 123 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKE-RIYCIDIVS-------------------------- 123 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--ccc-ceeeeEEee--------------------------
Confidence 578999999999999999999999887766666555443 110 111110000
Q ss_pred hhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEE--cChhhHHHHHHHHhhcCCCEEEEEcCChhhHH
Q 002339 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR--VSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (934)
Q Consensus 798 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r--~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ 875 (934)
.+..+-.+|.- .++.-. .--.+|..+|+.+++ +.+.+.++|||.-|++
T Consensus 124 --------n~~~ih~dg~h---------------------~i~~~~ds~fG~dK~~vI~~l~e-~~e~~fy~GDsvsDls 173 (220)
T COG4359 124 --------NNDYIHIDGQH---------------------SIKYTDDSQFGHDKSSVIHELSE-PNESIFYCGDSVSDLS 173 (220)
T ss_pred --------cCceEcCCCce---------------------eeecCCccccCCCcchhHHHhhc-CCceEEEecCCccccc
Confidence 00011111110 001111 112479999999998 8888999999999999
Q ss_pred HHHHcCccEEE
Q 002339 876 MIQEADIGIGI 886 (934)
Q Consensus 876 ml~~A~vGIam 886 (934)
+-+.+|+=.|-
T Consensus 174 aaklsDllFAK 184 (220)
T COG4359 174 AAKLSDLLFAK 184 (220)
T ss_pred HhhhhhhHhhH
Confidence 98888876653
No 135
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.65 E-value=0.21 Score=49.72 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=33.6
Q ss_pred CCEEEEEcCChhhHHHHHHcCccE--EE-cccchhhH-HHhCcEeecCccch
Q 002339 861 GKTTLAIGDGANDVGMIQEADIGI--GI-SGVEGMQA-VMASDFSIAQFRFL 908 (934)
Q Consensus 861 ~~~v~aiGDG~ND~~ml~~A~vGI--am-~~~e~~~a-~~~AD~ii~~~~~l 908 (934)
...++||||...|+.+=+.|++.. ++ .|...... ...||+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 467899999999999999999953 44 34321112 23489999776554
No 136
>PLN02151 trehalose-phosphatase
Probab=94.60 E-value=1.3 Score=48.69 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=46.9
Q ss_pred CceEEEEcC-hhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHc-----CccEEEcccchhhHHHhCcEeecC
Q 002339 837 ASVICCRVS-PKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEA-----DIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 837 ~~~i~~r~~-p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A-----~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
+.++-.|-. .-+|+..++.+.+..+ ..++++||-..|-.|++.. ++||-++.... .-.|+|.|.+
T Consensus 257 kkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~d 333 (354)
T PLN02151 257 RKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQE 333 (354)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCC
Confidence 334444432 3489999998876432 2489999999999999864 45555542111 1278999988
Q ss_pred ccchhhh
Q 002339 905 FRFLERL 911 (934)
Q Consensus 905 ~~~l~~l 911 (934)
-..+..+
T Consensus 334 p~eV~~~ 340 (354)
T PLN02151 334 PDEVMEF 340 (354)
T ss_pred HHHHHHH
Confidence 6655544
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.58 E-value=0.2 Score=53.10 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=32.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH---HHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI---NIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~---~ia~~~gi~ 758 (934)
..++-|++.+.|+.|++.|+++.++|++...... ..-+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 4456799999999999999999999999854333 334445653
No 138
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.51 E-value=0.049 Score=52.54 Aligned_cols=42 Identities=14% Similarity=-0.016 Sum_probs=36.8
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.-+++|++.+.++.|+ .++++.++|+-....+..+...+++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3467999999999998 57999999999999999988887763
No 139
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.30 E-value=0.19 Score=48.60 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.2
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999988877766554
No 140
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.08 E-value=0.17 Score=50.12 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSL 757 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gi 757 (934)
.+-+++.++|+.|++.|++++++|+.. ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 577999999999999999999999987 4556666666665
No 141
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.05 E-value=0.15 Score=49.13 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=24.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~ 744 (934)
++.|++.++|+.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
No 142
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.99 E-value=0.21 Score=51.02 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.3
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
++-|++.++|+.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57799999999999999999999986543 3555556665
No 143
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.71 E-value=0.86 Score=52.34 Aligned_cols=57 Identities=11% Similarity=0.073 Sum_probs=52.4
Q ss_pred hhcCceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 703 MEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 703 iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+....+-+|.++||-.
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEa 867 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEA 867 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhcccc
Confidence 335778999999999999999999999999999999999999999999999999854
No 144
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.52 E-value=0.37 Score=49.56 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=27.8
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
-+.-+++.+.++.|++.|++|+++|||....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3667999999999999999999999999754
No 145
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=93.38 E-value=0.3 Score=51.23 Aligned_cols=69 Identities=20% Similarity=0.227 Sum_probs=34.2
Q ss_pred cCceEEEEcChhhHHHHHHHHhhcCC------CEEEEEcCChhhHHHHHHcC------ccEEEcccchhhHHHhCcEeec
Q 002339 836 CASVICCRVSPKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQEAD------IGIGISGVEGMQAVMASDFSIA 903 (934)
Q Consensus 836 ~~~~i~~r~~p~qK~~iv~~lk~~~~------~~v~aiGDG~ND~~ml~~A~------vGIam~~~e~~~a~~~AD~ii~ 903 (934)
.+.++-.|..-..|+..++.+.+..+ ..++++||...|-.|++..+ +||-++..+.-...-+|+|-+.
T Consensus 153 g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 153 GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp -SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 34556666665679999998876443 36999999999999999854 3444443331113346666654
Q ss_pred C
Q 002339 904 Q 904 (934)
Q Consensus 904 ~ 904 (934)
+
T Consensus 233 ~ 233 (235)
T PF02358_consen 233 D 233 (235)
T ss_dssp -
T ss_pred c
Confidence 4
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.24 E-value=0.22 Score=46.67 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=32.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACS 756 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~g 756 (934)
++.+++.++|+.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6766666655544
No 147
>PLN02645 phosphoglycolate phosphatase
Probab=92.95 E-value=0.36 Score=52.94 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=39.3
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gi 757 (934)
|++.-.+.+-+++.++|+.|++.|++++++|++...+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666777899999999999999999999999977777766 44565
No 148
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.81 E-value=0.31 Score=47.69 Aligned_cols=26 Identities=35% Similarity=0.542 Sum_probs=23.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
++-+++.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 45689999999999999999999975
No 149
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.63 E-value=0.48 Score=52.40 Aligned_cols=27 Identities=30% Similarity=0.412 Sum_probs=24.5
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCC
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
-++.|++.++|+.|+++|+++.|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999983
No 150
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.48 E-value=0.95 Score=43.36 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=40.9
Q ss_pred CceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 706 dl~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|-|++..- ....-|++++=+.+++.+|+++.++|.-+..-+..++..+|+.
T Consensus 36 DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 36 DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 44555533 3346688889999999999999999998888898899888873
No 151
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.29 E-value=0.46 Score=52.36 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++-+++.++|+.|+++|+++.++|.-....|..+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999988887766
No 152
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.18 E-value=0.91 Score=58.19 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
.+-||+.+.|+.|+++|++++++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888888888874
No 153
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.11 E-value=1.1 Score=46.34 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=32.9
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 754 (934)
++-++.+++.++|++|+++|+++.++|..+......+...
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457899999999999999999999999877765555443
No 154
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.73 E-value=1 Score=43.30 Aligned_cols=107 Identities=18% Similarity=0.118 Sum_probs=69.1
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc------ccCCceEEEEcCCCchhHHHHHHHHHHHhHHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL------LRQGMKQICITALNSDSVGKAAKEAVKDNILM 789 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 789 (934)
+|..++++.+....+++.|++++-+|+|..-.|...-.-+.= --+.++++
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~------------------------ 80 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL------------------------ 80 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE------------------------
Confidence 479999999999999999999999999997655543322211 11111211
Q ss_pred HHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhc----CCCEEE
Q 002339 790 QITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG----TGKTTL 865 (934)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~----~~~~v~ 865 (934)
.+-..+-..+. . -+..+-..+.|...++.++.. .....+
T Consensus 81 ----------------------~sP~~l~~al~--------r-------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~a 123 (157)
T PF08235_consen 81 ----------------------LSPDSLFSALH--------R-------EVISKDPEEFKIACLRDLRALFPPDGNPFYA 123 (157)
T ss_pred ----------------------ECCcchhhhhh--------c-------cccccChHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 11111111110 0 033444446788888888764 456789
Q ss_pred EEcCChhhHHHHHHcCcc
Q 002339 866 AIGDGANDVGMIQEADIG 883 (934)
Q Consensus 866 aiGDG~ND~~ml~~A~vG 883 (934)
++|...+|+.+-++++|-
T Consensus 124 gfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 124 GFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ecCCcHHHHHHHHHcCCC
Confidence 999999999999988875
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.58 E-value=0.22 Score=51.67 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=31.1
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-++.++++++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34568999999998 5999999998877777766666664
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.38 E-value=0.43 Score=49.03 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.2
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
++.|++.++++.|+++|++++++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5679999999999999999999998654
No 157
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=91.09 E-value=0.86 Score=47.24 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=36.6
Q ss_pred cCCCchHHHHHHH--HhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKL--AQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l--~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
|+.|+.+++++.+ ++.|+.+.|+|.-+......+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5679999999999 55899999999999988888888888754
No 158
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.49 E-value=1.2 Score=43.79 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=23.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
+-|++.++|+.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
No 159
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.11 E-value=0.32 Score=55.67 Aligned_cols=48 Identities=23% Similarity=0.418 Sum_probs=40.8
Q ss_pred EEEEcChhhHHHHHHHHhhcCCCEEEEEcCChhhH--HHHHHcCccEEEcc
Q 002339 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV--GMIQEADIGIGISG 888 (934)
Q Consensus 840 i~~r~~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~--~ml~~A~vGIam~~ 888 (934)
.|..++|+.--++|+.+|+ .|++|+..|..+|-. -.+-.||++|++..
T Consensus 971 LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~ 1020 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDD 1020 (1354)
T ss_pred eccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEecc
Confidence 6788999999999999998 899999999998843 34567999998754
No 160
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=89.70 E-value=4.4 Score=42.84 Aligned_cols=207 Identities=12% Similarity=0.052 Sum_probs=100.9
Q ss_pred CceEEEeee--ecccCCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcC--cccCCceEE-EEcCCCchhHHHHH
Q 002339 706 DLILVGATA--VEDKLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACS--LLRQGMKQI-CITALNSDSVGKAA 779 (934)
Q Consensus 706 dl~~lG~i~--i~D~lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~i-~~~~~~~~~~~~~~ 779 (934)
|.++..+.- ....+-++..+.++.|... ..-+||+|||+.........-.| ++..++--+ ..++..........
T Consensus 26 DGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~ 105 (266)
T COG1877 26 DGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEA 105 (266)
T ss_pred cccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHH
Confidence 344444443 3345667888999999877 45899999999998887765333 333333322 33333222111111
Q ss_pred HHHHHHhHHHHHHHHHhhhhccCCCCCcEEEEEcCh----hhhH--hhhHH--HHHHHHhhhhccCceEEEEcChhhHHH
Q 002339 780 KEAVKDNILMQITNASQMIKLERDPHAAYALIIEGK----TLAY--ALEDD--MKHHFLGLAVECASVICCRVSPKQKAL 851 (934)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~----~l~~--~~~~~--~~~~~~~~~~~~~~~i~~r~~p~qK~~ 851 (934)
.......+...+...........-.....++.+.=. .... .+... ......--....+.+|.+|-+-..|+.
T Consensus 106 ~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 106 DLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred HhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHH
Confidence 111112222222222221111110111112111110 0000 00000 000000011233567888887778999
Q ss_pred HHHHHhhcCC---CEEEEEcCChhhHHHHHHcCc--cEEEc-ccchhhHHHhCcEeecCccchhhhH
Q 002339 852 VTRLVKEGTG---KTTLAIGDGANDVGMIQEADI--GIGIS-GVEGMQAVMASDFSIAQFRFLERLL 912 (934)
Q Consensus 852 iv~~lk~~~~---~~v~aiGDG~ND~~ml~~A~v--GIam~-~~e~~~a~~~AD~ii~~~~~l~~ll 912 (934)
.++.+....+ ..++..||...|-.|++..+- |+.+. +....+|+-.++.+-.....+..++
T Consensus 186 a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~~~~~~~~~~~~l~~~~ 252 (266)
T COG1877 186 AIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKFRLAGVYGFLRSLYKLL 252 (266)
T ss_pred HHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccccccccHHHHHHHHHHH
Confidence 9997766443 358899999999999999983 33221 1112225555444444444455553
No 161
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.62 E-value=0.96 Score=45.95 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++.|++.++|+.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999976554
No 162
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=89.38 E-value=0.84 Score=48.06 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=37.5
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH--HHHHHcCcc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI--NIGFACSLL 758 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~--~ia~~~gi~ 758 (934)
|.+.-...+-|+++++|+.|+++|+++.++|.-....+. ....++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555566778899999999999999999999996554433 455667764
No 163
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.16 E-value=2.4 Score=42.85 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=26.2
Q ss_pred HHHHHHHHhhcCC-CEEEEEcCChhhHHHHHHc--CccE-EE
Q 002339 849 KALVTRLVKEGTG-KTTLAIGDGANDVGMIQEA--DIGI-GI 886 (934)
Q Consensus 849 K~~iv~~lk~~~~-~~v~aiGDG~ND~~ml~~A--~vGI-am 886 (934)
|..++..+.+..+ ..+++|||..+|+.+-++| |+-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 3344443332233 4688999999999999999 9865 44
No 164
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=87.66 E-value=4 Score=40.39 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=33.9
Q ss_pred CceEEEEcChhh--------HHHHHHHHhhcC--CCEEEEEcCChhhHHHHHHcCcc
Q 002339 837 ASVICCRVSPKQ--------KALVTRLVKEGT--GKTTLAIGDGANDVGMIQEADIG 883 (934)
Q Consensus 837 ~~~i~~r~~p~q--------K~~iv~~lk~~~--~~~v~aiGDG~ND~~ml~~A~vG 883 (934)
..+.+|.-.|++ .+.+.++++++. -....+|||-..|+.+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 344666666653 356667777631 26789999999999999999887
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.58 E-value=0.69 Score=41.22 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=36.3
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCcc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSLL 758 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gi~ 758 (934)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 666677888899999999999999999999988766655554 445654
No 166
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.57 E-value=3.1 Score=48.43 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=45.2
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCChhhHHHHHHcCccEEEcccchhhHHHhCcEeecCccchhhhHhhhchhhhH
Q 002339 845 SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYK 921 (934)
Q Consensus 845 ~p~qK~~iv~~lk~~~~~~v~aiGDG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~~~~l~~lll~~Gr~~~~ 921 (934)
.-++|..-++.... ......+.||..+|.+||+.|+-+..++.+.. -.+...++...+++..||..++
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~--------~~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC--------EPLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC--------CcCCcccCCCceeeeCCcccCC
Confidence 34567766653321 11223799999999999999999999864221 1155567777777777876554
No 167
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.43 E-value=4.3 Score=40.79 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=34.3
Q ss_pred cCCCchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
|+-|+..++|+.+++.|. .++|+|--+.-....+-+..|+-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 466999999999999997 99999988887777777777663
No 168
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.37 E-value=1.4 Score=45.76 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=26.7
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++.-|++.+.++.+++.|++|+.+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 355588999999999999999999999865
No 169
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=84.13 E-value=2.1 Score=45.30 Aligned_cols=56 Identities=7% Similarity=0.026 Sum_probs=43.9
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCcccCCceEEE
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQGMKQIC 766 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~~~~~i~ 766 (934)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+.....+++.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit 68 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFT 68 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEee
Confidence 44445566678999999999999999999996 888888888888898654444443
No 170
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=83.22 E-value=1.8 Score=46.02 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.2
Q ss_pred Eeeeeccc----CCCchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCcc
Q 002339 711 GATAVEDK----LQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (934)
Q Consensus 711 G~i~i~D~----lr~~~~~~I~~l~~aGIkv~mlTGD~~~t---a~~ia~~~gi~ 758 (934)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444555 77899999999999999999999988775 44455566764
No 171
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.44 E-value=4.5 Score=40.36 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=31.9
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.+++.++|+.|+ .+++++|+-....+..+...+|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 489999998888888888888874
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=81.63 E-value=3.1 Score=44.24 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=37.9
Q ss_pred CC-CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 719 lr-~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
+| |++.+++++|+++|+++.++|+.....+...-..+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999975
No 173
>PRK10444 UMP phosphatase; Provisional
Probab=81.43 E-value=1.7 Score=45.77 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=40.1
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888887775
No 174
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.15 E-value=4.2 Score=40.62 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=30.2
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 723 VPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 723 ~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++|..|++. +++.++||.....+..+-...|+..
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~ 127 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR 127 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh
Confidence 36899999865 8999999999898888888888753
No 175
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.01 E-value=51 Score=41.17 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=32.7
Q ss_pred CCCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHc--CcccCCc
Q 002339 719 LQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFAC--SLLRQGM 762 (934)
Q Consensus 719 lr~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~--gi~~~~~ 762 (934)
+-+++.++|+.|.+. +..|+|+|||...+.......+ ++...++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG 579 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENG 579 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCC
Confidence 456788889999865 7899999999999888776543 3444433
No 176
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=79.55 E-value=6.9 Score=38.29 Aligned_cols=42 Identities=14% Similarity=0.217 Sum_probs=35.9
Q ss_pred cccCCCchHHHHHHHHhcCC--eEEEEcCC-------CHHHHHHHHHHcCc
Q 002339 716 EDKLQKGVPQCIDKLAQAGL--KIWVLTGD-------KMETAINIGFACSL 757 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGI--kv~mlTGD-------~~~ta~~ia~~~gi 757 (934)
++++-++..+.+++|++.+. +|+++|-- ....|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 67888999999999999987 59999886 36778888888886
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=78.81 E-value=1.9 Score=39.96 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=28.9
Q ss_pred ccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 717 D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+++.+++.++++.++++|++++++|||......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567789999999999999999999999987644
No 178
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=78.62 E-value=12 Score=40.30 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=35.4
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHH---HHHHcCcc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAIN---IGFACSLL 758 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~---ia~~~gi~ 758 (934)
|++.-.+.+=+++.++|++|+++|++++++||+...+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444466777899999999999999999999976544333 23445664
No 179
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=78.26 E-value=11 Score=39.72 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=27.2
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
+.|.-|++.+..+.+++.|++|+++|||...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4456689999999999999999999999864
No 180
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=77.22 E-value=35 Score=44.27 Aligned_cols=21 Identities=29% Similarity=0.156 Sum_probs=18.5
Q ss_pred CCeEEEee--cccCccCcEEEec
Q 002339 145 NGVFSYKP--WEKIQVGDIVKVE 165 (934)
Q Consensus 145 ~g~~~~i~--~~~L~vGDII~l~ 165 (934)
-|....+. ..+..|.|.+.++
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 37888898 8999999999996
No 181
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=76.73 E-value=5.2 Score=42.64 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=36.5
Q ss_pred CC-CchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 719 lr-~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
+| |++.++|++|+++|+++.++|+.....+..+...+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 35 889999999999999999999877888888999999964
No 182
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=75.47 E-value=6 Score=42.00 Aligned_cols=54 Identities=20% Similarity=0.367 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCh-hhHHHHHHcCcc-EEE-cccc--h--hhHHHhCcEeecCccchhhhHh
Q 002339 860 TGKTTLAIGDGA-NDVGMIQEADIG-IGI-SGVE--G--MQAVMASDFSIAQFRFLERLLV 913 (934)
Q Consensus 860 ~~~~v~aiGDG~-ND~~ml~~A~vG-Iam-~~~e--~--~~a~~~AD~ii~~~~~l~~lll 913 (934)
....++||||.. +|+.+=+.+++- |.+ .|.. . ......+|+++.++..|..+++
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHHh
Confidence 347899999996 999999999874 455 3421 1 1122357888888766665543
No 183
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.39 E-value=65 Score=40.64 Aligned_cols=37 Identities=14% Similarity=0.026 Sum_probs=29.7
Q ss_pred CCchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcC
Q 002339 720 QKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACS 756 (934)
Q Consensus 720 r~~~~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~g 756 (934)
-+++.++|+.|.+. +..|+|+|||...........++
T Consensus 624 ~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 624 HPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 36778889999876 67999999999998887765543
No 184
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=70.33 E-value=14 Score=38.70 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++-|++.++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999875 899999885543
No 185
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.04 E-value=12 Score=38.62 Aligned_cols=44 Identities=20% Similarity=0.195 Sum_probs=39.5
Q ss_pred cccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 716 ~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
..++.+|+.+.+..|++.|+++.+.|+-....+..+....|+..
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 34788999999999999999999999999888888888889865
No 186
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=68.92 E-value=9.7 Score=31.59 Aligned_cols=46 Identities=20% Similarity=0.374 Sum_probs=33.0
Q ss_pred CCEEEEEcCC-hhhHHHHHHcCcc-EEE-cccch-hhH---HHhCcEeecCcc
Q 002339 861 GKTTLAIGDG-ANDVGMIQEADIG-IGI-SGVEG-MQA---VMASDFSIAQFR 906 (934)
Q Consensus 861 ~~~v~aiGDG-~ND~~ml~~A~vG-Iam-~~~e~-~~a---~~~AD~ii~~~~ 906 (934)
...++||||. ..|+.+=+.+++- |.+ +|... .+. ...+||++.++.
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 4679999999 9999999999974 455 34322 112 247899987754
No 187
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=68.29 E-value=4 Score=39.94 Aligned_cols=43 Identities=12% Similarity=0.005 Sum_probs=37.4
Q ss_pred eecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCc
Q 002339 714 AVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 714 ~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi 757 (934)
.+.=..||++.+.++.|.+. ..+++.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 44447899999999999987 99999999999999999887765
No 188
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=67.83 E-value=14 Score=47.16 Aligned_cols=22 Identities=14% Similarity=-0.044 Sum_probs=19.5
Q ss_pred CCeEEEeecccCccCcEEEecc
Q 002339 145 NGVFSYKPWEKIQVGDIVKVEK 166 (934)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ 166 (934)
-|....+...+.+|.|.+.++.
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CCCEEEECCCCEecccEEEEEc
Confidence 4789999999999999999964
No 189
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=67.39 E-value=28 Score=41.03 Aligned_cols=183 Identities=11% Similarity=0.059 Sum_probs=113.6
Q ss_pred CceeeccccchhhhhHHHHHHHHhhHHHHHHHHHHHHh-cccCCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q 002339 56 TNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS-VTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEV 134 (934)
Q Consensus 56 ~N~i~~~k~~~~~fl~~~l~~qf~~~~~~~~l~~~il~-~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~ 134 (934)
-+..+-..|+++.+++...|.+|.+..++++.+..++. +-..+...++..+.+++++.++--..+-++.++|.+..+..
T Consensus 84 v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse 163 (1051)
T KOG0210|consen 84 VRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSE 163 (1051)
T ss_pred hhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34445567899999999999999999999998877653 21122244555566777888888899999999999987766
Q ss_pred ccceEE----------EEeCCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceE-------EEEeecCCCCC
Q 002339 135 NARKVS----------VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC-------YVETMNLDGET 197 (934)
Q Consensus 135 n~~~~~----------V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~-------~Vdes~LtGEs 197 (934)
+-.+.+ -+ .-|..+.+.-.+=+|-|.|.++.-|.--. ..+.+..-+|.. .--+..|+-++
T Consensus 164 ~y~~ltr~~~~~~~Ss~i-~vGDvi~v~K~~RVPADmilLrTsd~sg~--~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~ 240 (1051)
T KOG0210|consen 164 KYTKLTRDGTRREPSSDI-KVGDVIIVHKDERVPADMILLRTSDKSGS--CFIRTDQLDGETDWKLRLPVPRTQHLTEDS 240 (1051)
T ss_pred hheeeccCCccccccccc-ccccEEEEecCCcCCcceEEEEccCCCCc--eEEeccccCCcccceeeccchhhccCCccc
Confidence 542221 11 23677888888999999999987664321 223333222321 01133444443
Q ss_pred cceeeecccccCCCCChhhhhcCceEEEeeCCC------CCcceeEEEEEECCe
Q 002339 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPN------PSLYTFVGNIEYDRE 245 (934)
Q Consensus 198 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~------~~~~~f~Gt~~~~g~ 245 (934)
.+-.-. ........++.+|-|++...+.+ -....+++|++-.|.
T Consensus 241 el~~i~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 241 ELMEIS----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred chheEE----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 332221 11112234566678877765443 234567888877665
No 190
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=63.89 E-value=22 Score=41.77 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=24.2
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~ 745 (934)
+-|+++++|+.|+++|++++|+|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998554
No 191
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=63.51 E-value=14 Score=36.86 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=41.3
Q ss_pred ceEEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 707 l~~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
+.+-|.+.++|..-|++.|+++.|++++.+|..+|.-..+.-..+..++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4567999999999999999999999999999999887777655555443
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.20 E-value=37 Score=34.89 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=33.4
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCccc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 759 (934)
++-+++.++++.++.. ++++++|--....+.....++||..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4568888899998888 8999999877777778888888654
No 193
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=62.40 E-value=12 Score=29.12 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=32.0
Q ss_pred hccceEEEEeCCCeEEEeec-ccCccCcEEEeccCcccCC
Q 002339 134 VNARKVSVHVGNGVFSYKPW-EKIQVGDIVKVEKDQFFPA 172 (934)
Q Consensus 134 ~n~~~~~V~~r~g~~~~i~~-~~L~vGDII~l~~ge~iPa 172 (934)
+....+.|+..+|++..|+. .+..+||.|.+.+.+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 34577889989999999875 4799999999998887653
No 194
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=60.98 E-value=67 Score=40.86 Aligned_cols=65 Identities=17% Similarity=0.372 Sum_probs=44.1
Q ss_pred HHHHHHHhhhhccCceEEE-----EcChh--hHHHHHHHHhhcCC----CEEEEEcCChh-h-HHHHHHcCccEEEcc
Q 002339 824 DMKHHFLGLAVECASVICC-----RVSPK--QKALVTRLVKEGTG----KTTLAIGDGAN-D-VGMIQEADIGIGISG 888 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~i~~-----r~~p~--qK~~iv~~lk~~~~----~~v~aiGDG~N-D-~~ml~~A~vGIam~~ 888 (934)
++...+......|+.+.+. .+.|. .|++.+++|..+.| ++++++||..| | ..||.--+-+|-+.|
T Consensus 925 elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 925 ELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 4555555555556544332 35564 69999999987544 45677999999 9 557777788887655
No 195
>PTZ00445 p36-lilke protein; Provisional
Probab=54.59 E-value=23 Score=35.91 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=24.6
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++|+.+.-+++|+++||+|.++|=-..+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 6899999999999999999999965544
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=52.72 E-value=17 Score=38.51 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=39.6
Q ss_pred EEEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 709 ~lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
+=|++.--..+=|++.++|+.|+++|++++.+|--...+...++.++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34778888889999999999999999999999998887777555544
No 197
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=50.53 E-value=12 Score=36.80 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=25.8
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++.|++.++++ ++.++|.-+........+.+|+.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 47899999998 36788887777777777777763
No 198
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=50.07 E-value=35 Score=33.14 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=27.7
Q ss_pred CCCchHHHHHHHHhcCCeEEEEcCCCHH----HHHHHHHHcCc
Q 002339 719 LQKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSL 757 (934)
Q Consensus 719 lr~~~~~~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gi 757 (934)
+++=+++.|..-++.|=+++.+|||..- ++..+|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 3455667788888889999999999864 34444554444
No 199
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=46.49 E-value=1.2e+02 Score=31.03 Aligned_cols=126 Identities=17% Similarity=0.254 Sum_probs=78.4
Q ss_pred EeeeecccCCCchH--HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcccCCceEEEEcCCCchhHHHHHHHHHHHhHH
Q 002339 711 GATAVEDKLQKGVP--QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNIL 788 (934)
Q Consensus 711 G~i~i~D~lr~~~~--~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 788 (934)
|-.-+++ |+|+-. +.+-.|++.+ -|+.|.-...-|..+-+.+||.+--..+++++..++.
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~--------------- 153 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI--------------- 153 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC---------------
Confidence 4445666 777643 4555554443 8999988888899999999997655556655544321
Q ss_pred HHHHHHHhhhhccCCCCCcEEEEEcChhhhHhhhHHHHHHHHhhhhccCceEEEEcChhhHHHHHHHHhhcCCCEEEEEc
Q 002339 789 MQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIG 868 (934)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v~aiG 868 (934)
+..++|.-+|+-=..+.+...-.....++++-
T Consensus 154 ------------------------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfD 185 (244)
T KOG3109|consen 154 ------------------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFD 185 (244)
T ss_pred ------------------------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEc
Confidence 01266665554322333333221357899999
Q ss_pred CChhhHHHHHHcCccEEEcccchhhHHHhCcEeecC
Q 002339 869 DGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQ 904 (934)
Q Consensus 869 DG~ND~~ml~~A~vGIam~~~e~~~a~~~AD~ii~~ 904 (934)
|+.+-+..=+.-|.+--+-+.+. -...+|+++.+
T Consensus 186 DS~~NI~~ak~vGl~tvlv~~~~--~~~~~d~~l~~ 219 (244)
T KOG3109|consen 186 DSERNIQTAKEVGLKTVLVGREH--KIKGVDYALEQ 219 (244)
T ss_pred CchhhHHHHHhccceeEEEEeee--cccchHHHHHH
Confidence 99999987777666555545544 23566777665
No 200
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=46.01 E-value=39 Score=42.94 Aligned_cols=124 Identities=10% Similarity=0.051 Sum_probs=70.8
Q ss_pred CCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeec---CCCCCcceeeecccccCCCCChhhhhcCc
Q 002339 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN---LDGETNLKVKRAMEATSPLNEDEAFKEFT 221 (934)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~---LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 221 (934)
-|..+.+...|.+|-|...|+..+ . .++.+.-+|...-=+.. +.++..|..
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~-l-----~VdEs~LTGES~pv~K~~~~~~~~~~~~~-------------------- 213 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD-L-----EVDESALTGESLPVEKQALPLTKSDAPLG-------------------- 213 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC-c-----eEEcccccCCCcchhcccccccccccccc--------------------
Confidence 478999999999999999999776 3 33333222322111111 111222221
Q ss_pred eEEEeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhcc-CCCCCccchHHHHHHH
Q 002339 222 GTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA-TTSPSKRSGIEKKMDK 300 (934)
Q Consensus 222 ~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~-~~~~~k~s~l~~~~~~ 300 (934)
.+.....|+||.+..|+.. |- +. ..|.-++-|+.++.+... .....-.-.+.+....
T Consensus 214 -------~d~~n~l~sGt~V~~G~~~----------gi-Vv----aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~ 271 (917)
T COG0474 214 -------LDRDNMLFSGTTVVSGRAK----------GI-VV----ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKF 271 (917)
T ss_pred -------CCccceEEeCCEEEcceEE----------EE-EE----EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHH
Confidence 1122255999999998832 11 22 577788889998888777 3333334455555555
Q ss_pred HHHHHHHHHHHHHHHH
Q 002339 301 IIFILFAILVLISLIS 316 (934)
Q Consensus 301 ~~~~~~~~~iil~~i~ 316 (934)
+..+.+++.+++.++.
T Consensus 272 l~~~~l~~~~~~~~~~ 287 (917)
T COG0474 272 LLVLALVLGALVFVVG 287 (917)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555544444444444
No 201
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=45.70 E-value=87 Score=39.00 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=19.7
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 643 YEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 643 ~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
.+....+.++.+.+.|.++..+.-
T Consensus 443 ~R~~a~~aI~~l~~aGI~v~miTG 466 (755)
T TIGR01647 443 PRHDTKETIERARHLGVEVKMVTG 466 (755)
T ss_pred ChhhHHHHHHHHHHCCCeEEEECC
Confidence 567778888999999999887774
No 202
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.00 E-value=65 Score=29.62 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=57.1
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHh
Q 002339 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (934)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~ 732 (934)
-+...|++|+.+... .+.+++.+ ...+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 567899999988865 44333211 12245777888888888888999999999999
Q ss_pred cCC-e-EEEEcCCCHHHHHHHHHHcCcc
Q 002339 733 AGL-K-IWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 733 aGI-k-v~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+|. + .+++-|.....-..-.++.|+.
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCCC
Confidence 977 3 4566676665445666688864
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=43.60 E-value=43 Score=34.96 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=36.1
Q ss_pred EeeeecccCCCchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHH-cCc
Q 002339 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFA-CSL 757 (934)
Q Consensus 711 G~i~i~D~lr~~~~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~-~gi 757 (934)
|++.-.+.+=+++.++|+.++++|++++++| |+..........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4555556667899999999999999999998 7777665554444 665
No 204
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=40.50 E-value=93 Score=28.29 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=56.7
Q ss_pred HHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHH
Q 002339 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLA 731 (934)
Q Consensus 652 ~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~ 731 (934)
.-+...|++|+.+. ..++.+++.+. ..+.+-.++|+......--+.+++.++.++
T Consensus 21 ~~l~~~G~~V~~lg-~~~~~~~l~~~------------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 21 RALRDAGFEVIDLG-VDVPPEEIVEA------------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHCCCEEEECC-CCCCHHHHHHH------------------------HHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 34567999998777 33555543321 123577788888887777799999999999
Q ss_pred hcCC-e-EEEEcCCCHHHHHHHHHHcCcc
Q 002339 732 QAGL-K-IWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 732 ~aGI-k-v~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+.+- . .+++-|-........+++.|..
T Consensus 76 ~~~~~~~~i~vGG~~~~~~~~~~~~~G~D 104 (119)
T cd02067 76 EAGLDDIPVLVGGAIVTRDFKFLKEIGVD 104 (119)
T ss_pred HcCCCCCeEEEECCCCChhHHHHHHcCCe
Confidence 9976 3 4667776554434577777763
No 205
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=39.97 E-value=5.3e+02 Score=33.35 Aligned_cols=126 Identities=13% Similarity=0.004 Sum_probs=68.5
Q ss_pred CCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCcceeeecccccCCCCChhhhhcCceEE
Q 002339 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTV 224 (934)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 224 (934)
-|....+...+..|.|.+.++.+. +.++.+.-+|...--+..- |.+. ..+.+.
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~~-~~~~---~~~~~~----------------- 213 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRSP-EFTH---ENPLET----------------- 213 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceeccC-CCcc---cCcccc-----------------
Confidence 478999999999999999998652 2233333234332212211 1110 011110
Q ss_pred EeeCCCCCcceeEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccchhhhhccCCC-CCccchHHHHHHHHHH
Q 002339 225 KCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTS-PSKRSGIEKKMDKIIF 303 (934)
Q Consensus 225 ~~~~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~-~~k~s~l~~~~~~~~~ 303 (934)
....|+||.+++|...- .+. ..|.=.+.|.-.+........ ..-...+++..+.++.
T Consensus 214 -------~n~l~~Gt~v~~G~~~~-----------~V~----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~ 271 (997)
T TIGR01106 214 -------RNIAFFSTNCVEGTARG-----------IVV----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITG 271 (997)
T ss_pred -------CCeEEeccEeeeeeEEE-----------EEE----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHH
Confidence 11348999998886221 111 234445556655555444322 2234677888888877
Q ss_pred HHHHHHHHHHHHHHHH
Q 002339 304 ILFAILVLISLISSIG 319 (934)
Q Consensus 304 ~~~~~~iil~~i~~i~ 319 (934)
+.+++.+++.++..+.
T Consensus 272 ~~~~~~~~~~~~~~~~ 287 (997)
T TIGR01106 272 VAVFLGVSFFILSLIL 287 (997)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7766666555554433
No 206
>PRK08508 biotin synthase; Provisional
Probab=38.69 E-value=4e+02 Score=28.55 Aligned_cols=50 Identities=12% Similarity=0.030 Sum_probs=32.1
Q ss_pred hHHHHHHHHhcCC-eEE------------EEcCCCHHH---HHHHHHHcCcccCCceEEEEcCCCch
Q 002339 723 VPQCIDKLAQAGL-KIW------------VLTGDKMET---AINIGFACSLLRQGMKQICITALNSD 773 (934)
Q Consensus 723 ~~~~I~~l~~aGI-kv~------------mlTGD~~~t---a~~ia~~~gi~~~~~~~i~~~~~~~~ 773 (934)
.++.+++|+++|+ .+. +.||...+. ++..|+++|+-....-++-. +++.+
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl-GEt~e 166 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL-GESWE 166 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec-CCCHH
Confidence 5899999999999 333 466766555 45568899974444333333 44444
No 207
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=38.42 E-value=47 Score=30.32 Aligned_cols=37 Identities=24% Similarity=0.531 Sum_probs=29.1
Q ss_pred CchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCc
Q 002339 721 KGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSL 757 (934)
Q Consensus 721 ~~~~~~I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gi 757 (934)
+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 567899999999999 7999999989999999999887
No 208
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=38.03 E-value=53 Score=32.27 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=31.1
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEc-CCCHHHHHHHHHHcCcc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLT-GDKMETAINIGFACSLL 758 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlT-GD~~~ta~~ia~~~gi~ 758 (934)
.+-|++++.|+.|++.|+++.++| -+.+..|..+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 466999999999999999999999 57788999999998887
No 209
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.82 E-value=51 Score=31.95 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=37.4
Q ss_pred ecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCcc
Q 002339 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 715 i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
..=++||++.+.++.|++. +++++.|.-....|..+.+.++..
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3446899999999999855 999999999999999999888764
No 210
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=37.08 E-value=91 Score=24.67 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=29.5
Q ss_pred hhhccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002339 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG 319 (934)
Q Consensus 280 i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~iil~~i~~i~ 319 (934)
.+.|.-..+.+++.+...+..+...+.+++++.+++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4556555666678899999999888877777777776654
No 211
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=35.87 E-value=1.1e+02 Score=32.71 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=22.0
Q ss_pred CCCEEEEEcCC-hhhHHHHHHcCccE-EE
Q 002339 860 TGKTTLAIGDG-ANDVGMIQEADIGI-GI 886 (934)
Q Consensus 860 ~~~~v~aiGDG-~ND~~ml~~A~vGI-am 886 (934)
....++||||. ..|+.+=+.|++-. .+
T Consensus 218 ~~~~~lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 218 DPARTLMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred ChhhEEEECCChHHHHHHHHHcCCcEEEE
Confidence 34789999999 59999999999754 44
No 212
>PRK10444 UMP phosphatase; Provisional
Probab=35.86 E-value=4e+02 Score=27.99 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCh-hhHHHHHHcCccE-EE-cccchhhHH----HhCcEeecCccc
Q 002339 860 TGKTTLAIGDGA-NDVGMIQEADIGI-GI-SGVEGMQAV----MASDFSIAQFRF 907 (934)
Q Consensus 860 ~~~~v~aiGDG~-ND~~ml~~A~vGI-am-~~~e~~~a~----~~AD~ii~~~~~ 907 (934)
..+.++||||.. +|+.+=+.|++-. .+ .|....+.. ...|+++.+...
T Consensus 190 ~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~e 244 (248)
T PRK10444 190 HSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVAD 244 (248)
T ss_pred CcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHH
Confidence 357899999996 8999999999854 44 453321122 246787766433
No 213
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=33.23 E-value=22 Score=30.16 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=16.6
Q ss_pred eecccCccCcEEEe-ccCcccCC
Q 002339 151 KPWEKIQVGDIVKV-EKDQFFPA 172 (934)
Q Consensus 151 i~~~~L~vGDII~l-~~ge~iPa 172 (934)
+.-.+|.+||.|.| +.||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44589999999988 69999995
No 214
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=32.44 E-value=3.2e+02 Score=34.82 Aligned_cols=23 Identities=17% Similarity=0.011 Sum_probs=19.8
Q ss_pred CCeEEEeecccCccCcEEEeccC
Q 002339 145 NGVFSYKPWEKIQVGDIVKVEKD 167 (934)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~g 167 (934)
-|....+...+..|-|.+.++..
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~ 159 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV 159 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC
Confidence 37899999999999999999854
No 215
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=31.85 E-value=64 Score=28.42 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=25.9
Q ss_pred hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCccc
Q 002339 131 DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFF 170 (934)
Q Consensus 131 ~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~i 170 (934)
........+++ ||+.. .++.++++||+|.|.-|...
T Consensus 28 k~~~~~GrV~v---NG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 28 KEMIEGGRVKV---NGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HHHHHCCeEEE---CCEEc-ccccccCCCCEEEEEeCCcE
Confidence 33445566655 45555 89999999999999887653
No 216
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=31.64 E-value=1.5e+02 Score=27.94 Aligned_cols=81 Identities=12% Similarity=0.126 Sum_probs=54.7
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHh
Q 002339 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (934)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~ 732 (934)
-+...|+.|+.+....- .+++ + ....|.+-.++|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~-~e~~---------------------v---~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP-QEEF---------------------I---KAAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCC-HHHH---------------------H---HHHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 45678999999886433 2222 1 122346788899888877767778999999999
Q ss_pred cCC--eEEEEcCCCH------HHHHHHHHHcCcc
Q 002339 733 AGL--KIWVLTGDKM------ETAINIGFACSLL 758 (934)
Q Consensus 733 aGI--kv~mlTGD~~------~ta~~ia~~~gi~ 758 (934)
+|. .+|++-|-.. .....-++++|+.
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~ 112 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFD 112 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCC
Confidence 987 5677888421 1124457888853
No 217
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=31.64 E-value=2.1e+02 Score=36.37 Aligned_cols=25 Identities=16% Similarity=0.129 Sum_probs=20.4
Q ss_pred ccHHHHHHHHHHHHhcCCeEEEEEE
Q 002339 642 MYEEATTKLLNEYGEAGLRTLALAY 666 (934)
Q Consensus 642 ~~~~~~~~~~~~~~~~Glr~l~~A~ 666 (934)
+.+....+.++.+...|.|+..+.-
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG 539 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG 539 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC
Confidence 3567778889999999999888774
No 218
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.73 E-value=2.7e+02 Score=30.18 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=39.5
Q ss_pred EEEcChhhHHHHHHHHhh-cCCCEEEEEcCChh---hHHHH-H------HcCccEEEccc-chhhHHHhCcEeecC
Q 002339 841 CCRVSPKQKALVTRLVKE-GTGKTTLAIGDGAN---DVGMI-Q------EADIGIGISGV-EGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~qK~~iv~~lk~-~~~~~v~aiGDG~N---D~~ml-~------~A~vGIam~~~-e~~~a~~~AD~ii~~ 904 (934)
+.-+||..-.++++...- ..|+.+..+|-+.. -+.|| . .|.|-+..+.+ +...+...||+++.-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 556777765555554431 15899999999854 45544 2 34455555433 334467889999874
No 219
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=30.61 E-value=2.1e+02 Score=26.95 Aligned_cols=80 Identities=16% Similarity=0.166 Sum_probs=55.5
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHh
Q 002339 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (934)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~ 732 (934)
-+...|++|+.++.. .+.+++.+ ...+.+-.++|+-...-...+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~-vp~e~i~~------------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVM-TSQEEFID------------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 456799999999854 33333211 12345778889888888888999999999999
Q ss_pred cCC--eEEEEcCCC------HHHHHHHHHHcCc
Q 002339 733 AGL--KIWVLTGDK------METAINIGFACSL 757 (934)
Q Consensus 733 aGI--kv~mlTGD~------~~ta~~ia~~~gi 757 (934)
.|. ..|++-|-- ......-++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 245566654 3445567888885
No 220
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=30.49 E-value=2.9e+02 Score=29.12 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=31.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 755 (934)
.+.+++++.|+.|++.|+.|.-+|.+.+.......+++
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~L 118 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLREL 118 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHH
Confidence 34589999999999999999999999987666555544
No 221
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=30.13 E-value=1.3e+02 Score=36.94 Aligned_cols=79 Identities=18% Similarity=0.314 Sum_probs=55.3
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCc
Q 002339 643 YEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKG 722 (934)
Q Consensus 643 ~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~ 722 (934)
.+.+-.+.++.+...|++++.+. -|++..-+.++.++ |+--+.-.+.|+
T Consensus 538 ~R~~a~~aI~~L~~~Gi~~~mLT------------------------GDn~~~A~~iA~~l-------GId~v~AellPe 586 (713)
T COG2217 538 LRPDAKEAIAALKALGIKVVMLT------------------------GDNRRTAEAIAKEL-------GIDEVRAELLPE 586 (713)
T ss_pred CChhHHHHHHHHHHCCCeEEEEc------------------------CCCHHHHHHHHHHc-------ChHhheccCCcH
Confidence 56677888999999999988877 34444444555443 444444444454
Q ss_pred hH-HHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 002339 723 VP-QCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (934)
Q Consensus 723 ~~-~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 753 (934)
=| +.|++|++.|.+|.|+ ||-..-|-+.|.
T Consensus 587 dK~~~V~~l~~~g~~VamV-GDGINDAPALA~ 617 (713)
T COG2217 587 DKAEIVRELQAEGRKVAMV-GDGINDAPALAA 617 (713)
T ss_pred HHHHHHHHHHhcCCEEEEE-eCCchhHHHHhh
Confidence 44 8999999999777776 998887777664
No 222
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.35 E-value=23 Score=35.21 Aligned_cols=14 Identities=36% Similarity=0.413 Sum_probs=12.7
Q ss_pred EEecCCCceeecce
Q 002339 418 ILSDKTGTLTCNQM 431 (934)
Q Consensus 418 i~~DKTGTLT~n~m 431 (934)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999884
No 223
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=28.93 E-value=8.3e+02 Score=27.07 Aligned_cols=114 Identities=23% Similarity=0.289 Sum_probs=62.5
Q ss_pred hhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEE
Q 002339 631 IIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710 (934)
Q Consensus 631 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~l 710 (934)
.++.+..+..+...+...++++.+...|+.-++++.|.-+....-+ .|.. +.+.+..-| -+
T Consensus 146 ~~~~ky~~t~~amvesA~~~~~~le~~~f~~iviSlKsSdv~~~i~---ayr~---------------la~~~dyPL-HL 206 (359)
T PF04551_consen 146 DILEKYGPTPEAMVESALEHVRILEELGFDDIVISLKSSDVPETIE---AYRL---------------LAERMDYPL-HL 206 (359)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHH---HHHH---------------HHHH--S-E-EE
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChHHHHH---HHHH---------------HHHhcCCCe-EE
Confidence 3444432223345667778888999999999999999876554322 1211 112222233 35
Q ss_pred EeeeecccCC--CchHHHHHHHHhcCC--eEEE-EcCCCHH---HHHHHHHHcCcccCCce
Q 002339 711 GATAVEDKLQ--KGVPQCIDKLAQAGL--KIWV-LTGDKME---TAINIGFACSLLRQGMK 763 (934)
Q Consensus 711 G~i~i~D~lr--~~~~~~I~~l~~aGI--kv~m-lTGD~~~---ta~~ia~~~gi~~~~~~ 763 (934)
|++---.... -...-.|-.|-..|| .+++ +|+|+.+ .|..|-+.+|+-....+
T Consensus 207 GvTEAG~~~~g~IkSsigiG~LL~~GIGDTIRVSLt~~p~~EV~va~~IL~al~lR~~g~~ 267 (359)
T PF04551_consen 207 GVTEAGTGEDGTIKSSIGIGALLLDGIGDTIRVSLTGDPVEEVKVAFEILQALGLRKRGPE 267 (359)
T ss_dssp EBSSEESCHHHHHHHHHHHHHHHHTT--SEEEE-ECSSCCCHHHHHHHHHHHTTSS-SS-E
T ss_pred eecCCCCcccchhHHHHHHHHHHHcCCCCEEEEECCCCchHHHHHHHHHHHHhCcCcCCce
Confidence 7764322221 122245667788888 4544 6888754 56777777888554433
No 224
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=28.83 E-value=64 Score=33.74 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=19.7
Q ss_pred CEEEEEcCC-hhhHHHHHHcCccE
Q 002339 862 KTTLAIGDG-ANDVGMIQEADIGI 884 (934)
Q Consensus 862 ~~v~aiGDG-~ND~~ml~~A~vGI 884 (934)
..++||||. .+|+.+=+.|++-.
T Consensus 214 ~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 214 NRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred ccEEEECCCcHHHHHHHHHCCCeE
Confidence 479999999 69999999888754
No 225
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=28.50 E-value=5.7e+02 Score=25.02 Aligned_cols=52 Identities=23% Similarity=0.346 Sum_probs=35.8
Q ss_pred HHHHhhcCCCEEEEE---cCChhhHHHHHHcC-cc---EEEcccchhhHHHhCcEeecCc
Q 002339 853 TRLVKEGTGKTTLAI---GDGANDVGMIQEAD-IG---IGISGVEGMQAVMASDFSIAQF 905 (934)
Q Consensus 853 v~~lk~~~~~~v~ai---GDG~ND~~ml~~A~-vG---Iam~~~e~~~a~~~AD~ii~~~ 905 (934)
|+.+-+ +|.+.++| |.+.|=+.+++.|. .| |+|.|.++-+.+.-+|+-|.=.
T Consensus 103 veA~g~-~GDvLigISTSGNS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~D~~i~VP 161 (176)
T COG0279 103 VEALGQ-PGDVLIGISTSGNSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLLDVEIRVP 161 (176)
T ss_pred HHhcCC-CCCEEEEEeCCCCCHHHHHHHHHHHHcCCEEEEEecCCCcccccccceEEecC
Confidence 677766 78888888 44555555666664 34 4888888766778889876543
No 226
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=28.40 E-value=4.6e+02 Score=23.94 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchH
Q 002339 645 EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVP 724 (934)
Q Consensus 645 ~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~ 724 (934)
....+.++.+..+|+++.+++-+........ | .+.++.....+.-...+.-..+ ...+|...
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~~l~~~~~~~~~--~~~KP~~~ 89 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEELGVPIDVLYACP--HCRKPKPG 89 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHCCCCEEEEEECC--CCCCCChH
Confidence 3456678888889999988886542211100 0 1111112222211212222222 23344433
Q ss_pred HHHHHHHhc-CC--eEEEEcCCCHHHHHHHHHHcCcc
Q 002339 725 QCIDKLAQA-GL--KIWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 725 ~~I~~l~~a-GI--kv~mlTGD~~~ta~~ia~~~gi~ 758 (934)
-....+++. |+ .=++.=||....-+..|+++|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 90 MFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 333444444 35 22455688656678888999984
No 227
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=27.85 E-value=41 Score=28.62 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=13.7
Q ss_pred EEEeecccCccCcEEEeccCcccC
Q 002339 148 FSYKPWEKIQVGDIVKVEKDQFFP 171 (934)
Q Consensus 148 ~~~i~~~~L~vGDII~l~~ge~iP 171 (934)
...++|.+|.||++|.|.-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 445899999999999997554443
No 228
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=27.84 E-value=2e+02 Score=20.08 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=11.9
Q ss_pred CCccchHHHHHHHHHHHHH
Q 002339 288 PSKRSGIEKKMDKIIFILF 306 (934)
Q Consensus 288 ~~k~s~l~~~~~~~~~~~~ 306 (934)
+.|+|.+|+...-++.++.
T Consensus 3 kkkKS~fekiT~v~v~lM~ 21 (35)
T PF13253_consen 3 KKKKSTFEKITMVVVWLML 21 (35)
T ss_pred CccccHHHHHHHHHHHHHH
Confidence 4567888877665554443
No 229
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=27.15 E-value=86 Score=34.67 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=34.0
Q ss_pred CCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc-C
Q 002339 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC-S 756 (934)
Q Consensus 720 r~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~-g 756 (934)
-|++++.++.|+++|+++.++|+-....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 489999999999999999999999999999888885 5
No 230
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=27.02 E-value=3.6e+02 Score=28.09 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=26.7
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~t 747 (934)
++=||+.+.++..-+.|.+|..+|-|..+.
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhc
Confidence 344999999999999999999999998765
No 231
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=26.66 E-value=1.4e+02 Score=30.11 Aligned_cols=79 Identities=13% Similarity=0.159 Sum_probs=56.3
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHHh
Q 002339 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (934)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~~ 732 (934)
-+...|++|+.++. .++.+++-+- ..+.+-.++|+-+.-..--+.+++.|+.|++
T Consensus 107 ~l~~~G~~vi~LG~-~vp~e~~v~~------------------------~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 107 MLRANGFDVIDLGR-DVPIDTVVEK------------------------VKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred HHHhCCcEEEECCC-CCCHHHHHHH------------------------HHHcCCCEEEEccccccCHHHHHHHHHHHHH
Confidence 45678999998873 4444443221 1235778899988888888999999999999
Q ss_pred cCCe---EEEEcCCCHHHHHHHHHHcCcc
Q 002339 733 AGLK---IWVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 733 aGIk---v~mlTGD~~~ta~~ia~~~gi~ 758 (934)
+|.+ .+++-|... + ...++++|-.
T Consensus 162 ~~~~~~v~i~vGG~~~-~-~~~~~~~gad 188 (197)
T TIGR02370 162 EGYRDSVKFMVGGAPV-T-QDWADKIGAD 188 (197)
T ss_pred cCCCCCCEEEEEChhc-C-HHHHHHhCCc
Confidence 9874 566777654 3 3477777764
No 232
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=26.45 E-value=2.4e+02 Score=35.94 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=72.6
Q ss_pred HHHHHHHh-hHHHHHHHHHHHHhcccCCCCCcc-------ccchhhHHHHHHHHHHHHHHHHHHhhhhhhhccceEEEEe
Q 002339 72 KALFEQFN-RVANIYFLIAALLSVTPLSPFSPV-------SMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHV 143 (934)
Q Consensus 72 ~~l~~qf~-~~~~~~~l~~~il~~~~~~~~~~~-------~~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~n~~~~~V~~ 143 (934)
..+|..|. .+.+.+.++..+..++.+....+. ..+.-.++++++..+...++.++.+++.+.+..-+-.+
T Consensus 69 ~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-- 146 (903)
T PRK15122 69 PHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-- 146 (903)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 34666654 456666655555555421111111 02445556667777888999999999988888765322
Q ss_pred CCCeEEEeeccc--CccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCC
Q 002339 144 GNGVFSYKPWEK--IQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (934)
Q Consensus 144 r~g~~~~i~~~~--L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs 197 (934)
.. ...|-... -.-|....|...|.+|-|.++++.. ..+-+|=-.+.|+.
T Consensus 147 ~~--~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G---d~IPaDg~li~g~~ 197 (903)
T PRK15122 147 RT--TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG---DMIPADVRLIESRD 197 (903)
T ss_pred CC--ceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC---CEEeeeEEEEEcCc
Confidence 11 22332221 0125789999999999999999855 34666666666654
No 233
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=25.33 E-value=3e+02 Score=29.41 Aligned_cols=84 Identities=15% Similarity=0.232 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhh-hcCceEEEeeeecccCCCc
Q 002339 644 EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMM-EKDLILVGATAVEDKLQKG 722 (934)
Q Consensus 644 ~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~i-E~dl~~lG~i~i~D~lr~~ 722 (934)
.+.+.+.++.+...|---+.+++-... ..|...++...... +.++..+-=+...|.=+.+
T Consensus 14 ~~~l~~~~~~l~~~~pd~isvT~~~~~-------------------~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~ 74 (272)
T TIGR00676 14 EENLWETVDRLSPLDPDFVSVTYGAGG-------------------STRDRTVRIVRRIKKETGIPTVPHLTCIGATREE 74 (272)
T ss_pred HHHHHHHHHHHhcCCCCEEEeccCCCC-------------------CcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHH
Confidence 356666677776555555555543321 12333333332222 2377777778888887888
Q ss_pred hHHHHHHHHhcCCe-EEEEcCCCHH
Q 002339 723 VPQCIDKLAQAGLK-IWVLTGDKME 746 (934)
Q Consensus 723 ~~~~I~~l~~aGIk-v~mlTGD~~~ 746 (934)
....|..++.+||+ +..+|||...
T Consensus 75 l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 75 IREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 99999999999995 5569999883
No 234
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=24.78 E-value=61 Score=32.48 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=23.5
Q ss_pred cCCCchHHHHHHHHhcCCeEEEEcCCCHH
Q 002339 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (934)
Q Consensus 718 ~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ 746 (934)
++-||+.+++++|.+.|..++++|++...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999999999988754
No 235
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.37 E-value=3.9e+02 Score=28.98 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=41.8
Q ss_pred EEEcChhhHHHHHHHHhh-cCCCEEEEEcCC-hh---hHHHHHHcCccEEEcc---cchhhHHHhCcEeecC
Q 002339 841 CCRVSPKQKALVTRLVKE-GTGKTTLAIGDG-AN---DVGMIQEADIGIGISG---VEGMQAVMASDFSIAQ 904 (934)
Q Consensus 841 ~~r~~p~qK~~iv~~lk~-~~~~~v~aiGDG-~N---D~~ml~~A~vGIam~~---~e~~~a~~~AD~ii~~ 904 (934)
|.-+||..-.++++...- ..|+.+++||-| .= =+.+|..++..+.+-+ .+...+...||+++.-
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 556777766666665532 258999999997 22 3346777888886632 2233356789999873
No 236
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.63 E-value=2e+02 Score=26.88 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=57.2
Q ss_pred HHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCchHHHHHHHH
Q 002339 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLA 731 (934)
Q Consensus 652 ~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~~~~~I~~l~ 731 (934)
..|...|+.|+-.... .+.+++- ....|.+-.++|+-++-..-.+.+++.++.|+
T Consensus 24 ~~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~ 78 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELD 78 (132)
T ss_pred HHHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHH
Confidence 3567799999987754 3333321 12335788899999999988899999999999
Q ss_pred hcCC-eE-EEEcCCCHHHHHHHHHHcCcc
Q 002339 732 QAGL-KI-WVLTGDKMETAINIGFACSLL 758 (934)
Q Consensus 732 ~aGI-kv-~mlTGD~~~ta~~ia~~~gi~ 758 (934)
++|. .+ +|+-|-....-..-.+++|+.
T Consensus 79 ~~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 79 KLGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred hcCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 9987 43 555554444444557778874
No 237
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.57 E-value=50 Score=25.48 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=10.7
Q ss_pred ccCcEEEeccCcc
Q 002339 157 QVGDIVKVEKDQF 169 (934)
Q Consensus 157 ~vGDII~l~~ge~ 169 (934)
.+||||+|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998864
No 238
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=23.22 E-value=1.4e+02 Score=26.90 Aligned_cols=83 Identities=22% Similarity=0.367 Sum_probs=52.3
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEE
Q 002339 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (934)
Q Consensus 545 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 624 (934)
..+.|.++=..+..|++.|.= ..|+.+.+..-+.-.+..+-++..+.|.-.+.
T Consensus 17 a~L~YeGSitID~~Ll~aagi---------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~ 69 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAGI---------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVIC 69 (111)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 456777777788888887642 22333334443444444444555555556666
Q ss_pred EcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHH
Q 002339 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSA 676 (934)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~ 676 (934)
.-||.- .+...|=|++.+||-.++++|...
T Consensus 70 lNGAAA----------------------r~~~~GD~vII~sy~~~~~~e~~~ 99 (111)
T cd06919 70 LNGAAA----------------------RLGQPGDRVIIMAYALMDEEEAEG 99 (111)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhc
Confidence 677652 345678899999999999876543
No 239
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.75 E-value=1.4e+02 Score=32.09 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=39.7
Q ss_pred EEeeeecccCCCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH---HcCcc
Q 002339 710 VGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF---ACSLL 758 (934)
Q Consensus 710 lG~i~i~D~lr~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~---~~gi~ 758 (934)
=|++-..+.+=|+++++++.|+..|.++.++|--+-.+-...++ ++|+-
T Consensus 30 DGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 30 DGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 37788889999999999999999999999999888766555544 45554
No 240
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=22.43 E-value=1.8e+02 Score=37.76 Aligned_cols=22 Identities=14% Similarity=0.060 Sum_probs=19.2
Q ss_pred CCeEEEeecccCccCcEEEecc
Q 002339 145 NGVFSYKPWEKIQVGDIVKVEK 166 (934)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ 166 (934)
-|....+...|.+|-|...|+.
T Consensus 138 pGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 138 PGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred CCCEEEECCCCEeeccEEEEEe
Confidence 3778999999999999999984
No 241
>PRK10053 hypothetical protein; Provisional
Probab=22.24 E-value=78 Score=29.51 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=24.9
Q ss_pred CCCeeeecCccccccccceEEEecCCCcee
Q 002339 398 GIPAQARTSNLNEELGQVDTILSDKTGTLT 427 (934)
Q Consensus 398 ~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT 427 (934)
+..-..-..++...||.=.|+|.|+||+++
T Consensus 60 Dd~~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 60 DGATVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred CCCeEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 334456678899999999999999999977
No 242
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=22.22 E-value=75 Score=30.87 Aligned_cols=24 Identities=33% Similarity=0.652 Sum_probs=20.9
Q ss_pred CCchHHHHHHHHhcCCeEEEEcCC
Q 002339 720 QKGVPQCIDKLAQAGLKIWVLTGD 743 (934)
Q Consensus 720 r~~~~~~I~~l~~aGIkv~mlTGD 743 (934)
-++|+++|++|.+.|.+++|+|-.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 357999999999999999999974
No 243
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=22.12 E-value=1.4e+02 Score=27.46 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=53.0
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEE
Q 002339 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (934)
Q Consensus 545 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 624 (934)
..+.|.++=-.+..|++.|.= ..|+.+.+..-+.-.+.-+-++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI---------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 456777777788888887642 22333333333444344444555555555666
Q ss_pred EcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002339 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (934)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (934)
.-||. ..+...|=+++.+||-.++++|...|
T Consensus 71 lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 66764 23456788999999999998876544
No 244
>PRK14584 hmsS hemin storage system protein; Provisional
Probab=21.88 E-value=5e+02 Score=24.96 Aligned_cols=15 Identities=27% Similarity=0.532 Sum_probs=9.7
Q ss_pred cCcEEEeccCcccCC
Q 002339 158 VGDIVKVEKDQFFPA 172 (934)
Q Consensus 158 vGDII~l~~ge~iPa 172 (934)
-|.|+.|+.+..+|-
T Consensus 131 ~G~Ii~V~~~~~~p~ 145 (153)
T PRK14584 131 HGHIIDVKEGLQLPE 145 (153)
T ss_pred CCCEEEeecCCCCCC
Confidence 366777776666664
No 245
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=21.83 E-value=41 Score=34.30 Aligned_cols=49 Identities=27% Similarity=0.407 Sum_probs=37.6
Q ss_pred EcChh--hHHHHHHHHhhcCCCEEEEEcC----ChhhHHHHHHcC-ccEEEcccch
Q 002339 843 RVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEAD-IGIGISGVEG 891 (934)
Q Consensus 843 r~~p~--qK~~iv~~lk~~~~~~v~aiGD----G~ND~~ml~~A~-vGIam~~~e~ 891 (934)
.++|. +|...++.|....-..+.++|| |.||-+....+. +|+++.+-+.
T Consensus 155 Dvfp~GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~D 210 (220)
T PF03332_consen 155 DVFPKGWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPED 210 (220)
T ss_dssp EEEETT-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHH
T ss_pred ccccCCccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHH
Confidence 45665 7999999887633578999999 899999999875 4888877555
No 246
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.80 E-value=3.5e+02 Score=29.08 Aligned_cols=53 Identities=4% Similarity=-0.068 Sum_probs=41.8
Q ss_pred cCceEEEeeeecccCCCch---HHHHHHHHhcCCeEEEE-cCCCHHHHHHHHHHcCc
Q 002339 705 KDLILVGATAVEDKLQKGV---PQCIDKLAQAGLKIWVL-TGDKMETAINIGFACSL 757 (934)
Q Consensus 705 ~dl~~lG~i~i~D~lr~~~---~~~I~~l~~aGIkv~ml-TGD~~~ta~~ia~~~gi 757 (934)
-+|..+|++++...-.+.. .+.++.+++.|+++++. .+-+...+..+|+++|+
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv 250 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGA 250 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCC
Confidence 3888889888765555554 57888899999998765 66677789999999997
No 247
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.62 E-value=1.3e+02 Score=27.29 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=26.6
Q ss_pred CCchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC
Q 002339 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756 (934)
Q Consensus 720 r~~~~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g 756 (934)
-+++.++++.+++.|++++.+|++.. ....+.+.|
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 46788999999999999999999874 333444434
No 248
>PRK04980 hypothetical protein; Provisional
Probab=21.46 E-value=1.7e+02 Score=26.02 Aligned_cols=28 Identities=25% Similarity=0.378 Sum_probs=23.9
Q ss_pred cccCccCcEEEec--cCcccCCeEEEEeec
Q 002339 153 WEKIQVGDIVKVE--KDQFFPADLLFLSSS 180 (934)
Q Consensus 153 ~~~L~vGDII~l~--~ge~iPaD~ilL~s~ 180 (934)
....+|||++.|. .+...-|++.+++..
T Consensus 29 e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~ 58 (102)
T PRK04980 29 ESHFKPGDVLRVGTFEDDRYFCTIEVLSVS 58 (102)
T ss_pred ccCCCCCCEEEEEECCCCcEEEEEEEEEEE
Confidence 5789999999997 778888999999843
No 249
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=21.01 E-value=1.6e+02 Score=27.20 Aligned_cols=84 Identities=21% Similarity=0.288 Sum_probs=53.1
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEecCCCCCCCceeEEEEeEecCCCCCCceEEEEEEcCCCcEEEE
Q 002339 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (934)
Q Consensus 545 ~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 624 (934)
..+.|.++=..+..|++.|.= ..|+.+.+..-++-.+..+-++..+.|.-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGI---------------------------LENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 456777777788888887642 22333333333443344444555555666666
Q ss_pred EcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002339 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (934)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (934)
.-||. ..+...|=+++.+||-.++++|...|
T Consensus 71 lNGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 67764 23456788999999999998875544
No 250
>PF15584 Imm44: Immunity protein 44
Probab=21.00 E-value=43 Score=28.75 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=16.1
Q ss_pred cCcEEEeccCcccCCeEEEE
Q 002339 158 VGDIVKVEKDQFFPADLLFL 177 (934)
Q Consensus 158 vGDII~l~~ge~iPaD~ilL 177 (934)
+.+-..|+.|++||||||--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 34566889999999999864
No 251
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.84 E-value=2e+02 Score=25.03 Aligned_cols=29 Identities=17% Similarity=0.362 Sum_probs=21.2
Q ss_pred eeeecccCCCchHHHHHHHHhcCC-eEEEE
Q 002339 712 ATAVEDKLQKGVPQCIDKLAQAGL-KIWVL 740 (934)
Q Consensus 712 ~i~i~D~lr~~~~~~I~~l~~aGI-kv~ml 740 (934)
.+++.....|.+.+++++|++.|+ +|+++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEEEE
Confidence 344444468999999999999997 44443
No 252
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.70 E-value=1.7e+02 Score=24.68 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=33.0
Q ss_pred eeeecccCCCchHHHHHHHHhcCCeEEE-EcCCCHHHHHHHHHHcCc
Q 002339 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWV-LTGDKMETAINIGFACSL 757 (934)
Q Consensus 712 ~i~i~D~lr~~~~~~I~~l~~aGIkv~m-lTGD~~~ta~~ia~~~gi 757 (934)
++.+.+...+.+.+..+.|+++|+++.+ ..+++...-...|...|+
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 3444566677788888888888998887 466666666667777775
No 253
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=20.60 E-value=3.1e+02 Score=33.56 Aligned_cols=79 Identities=19% Similarity=0.218 Sum_probs=52.2
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHhhhcCceEEEeeeecccCCCc
Q 002339 643 YEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKG 722 (934)
Q Consensus 643 ~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~i~i~D~lr~~ 722 (934)
.+....+.++++.+.|.|+..+.- |....-..++.++ |+..+.-...|+
T Consensus 442 ~R~~a~e~I~~Lr~~GI~vvMiTG------------------------Dn~~TA~aIA~el-------GI~~v~A~~~Pe 490 (673)
T PRK14010 442 IKDGLVERFRELREMGIETVMCTG------------------------DNELTAATIAKEA-------GVDRFVAECKPE 490 (673)
T ss_pred CcHHHHHHHHHHHHCCCeEEEECC------------------------CCHHHHHHHHHHc-------CCceEEcCCCHH
Confidence 567788899999999999988773 2222223333333 333333344454
Q ss_pred hH-HHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 002339 723 VP-QCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (934)
Q Consensus 723 ~~-~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 753 (934)
-| +.|+.+|+.|. ++..|||-..-|-++++
T Consensus 491 dK~~iV~~lQ~~G~-~VaMtGDGvNDAPALa~ 521 (673)
T PRK14010 491 DKINVIREEQAKGH-IVAMTGDGTNDAPALAE 521 (673)
T ss_pred HHHHHHHHHHhCCC-EEEEECCChhhHHHHHh
Confidence 44 67888888885 45568999988877765
No 254
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=20.26 E-value=1.2e+03 Score=30.34 Aligned_cols=178 Identities=13% Similarity=0.132 Sum_probs=92.6
Q ss_pred cchhhhhHHHHHHHHhhHHHHHHHHHHHH-hcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHhhhhhhh-----cc-
Q 002339 64 YNFFSYFPKALFEQFNRVANIYFLIAALL-SVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEV-----NA- 136 (934)
Q Consensus 64 ~~~~~fl~~~l~~qf~~~~~~~~l~~~il-~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~r~k~~~~~-----n~- 136 (934)
++++......-|..+.+...+...++.++ .+.+.++..++.-++.++++..+--..+-+..+++.+..+.. .+
T Consensus 14 ~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~ 93 (1057)
T TIGR01652 14 LTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGH 93 (1057)
T ss_pred hhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCC
Confidence 44443333456667777666666666554 455544455444455555566666666666666665553322 11
Q ss_pred -ceEEEEe---CCCeEEEeecccCccCcEEEeccCcccCCeEEEEeecCCCceEEEEeecCCCCCc-ceeeecccc----
Q 002339 137 -RKVSVHV---GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN-LKVKRAMEA---- 207 (934)
Q Consensus 137 -~~~~V~~---r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~s~~~~G~~~Vdes~LtGEs~-~~~K~~~~~---- 207 (934)
....+-- +-|..+.+...+.+|-|++.+...+.- ...-++++.-+|....-+..-.-.+. .........
T Consensus 94 ~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~--g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~ 171 (1057)
T TIGR01652 94 GQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPD--GVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGE 171 (1057)
T ss_pred CcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCC--ceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEE
Confidence 1111110 358899999999999999999865531 12245555555654433332111110 000000000
Q ss_pred cCCCCChhhhhcCceEEEeeC----C-CCCcceeEEEEEEC
Q 002339 208 TSPLNEDEAFKEFTGTVKCEN----P-NPSLYTFVGNIEYD 243 (934)
Q Consensus 208 ~~~~~~~~~~~~~~~~i~~~~----p-~~~~~~f~Gt~~~~ 243 (934)
........++..+.|++..+. | +.+...|.|+...+
T Consensus 172 i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~n 212 (1057)
T TIGR01652 172 IECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRN 212 (1057)
T ss_pred EEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecC
Confidence 000112234556888887654 1 23345688888876
No 255
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=20.14 E-value=95 Score=30.15 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=25.0
Q ss_pred CchHHHHHHHHhcCCeEEEEcCCCHHHHH
Q 002339 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (934)
Q Consensus 721 ~~~~~~I~~l~~aGIkv~mlTGD~~~ta~ 749 (934)
+.+.++++.+++.|++++.+||++--.-.
T Consensus 123 ~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~ 151 (176)
T COG0279 123 KNVLKAIEAAKEKGMTVIALTGKDGGKLA 151 (176)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCcccc
Confidence 67889999999999999999999765433
No 256
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=20.09 E-value=63 Score=26.12 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=12.4
Q ss_pred CCCeEEEeecccCccCcEEEeccCc
Q 002339 144 GNGVFSYKPWEKIQVGDIVKVEKDQ 168 (934)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge 168 (934)
-||+.+.-.-..|.+||+|.+ .|+
T Consensus 37 VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 37 VNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp ETTB----SS----SSEEEEE-TTE
T ss_pred ECCEEccccCCcCCCCCEEEE-CCE
Confidence 377888888899999999999 443
Done!