Query 002342
Match_columns 934
No_of_seqs 650 out of 4536
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 21:53:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0598 Ribosomal protein S6 k 100.0 1.1E-48 2.4E-53 413.4 17.4 235 666-930 22-256 (357)
2 KOG0616 cAMP-dependent protein 100.0 5.1E-48 1.1E-52 394.1 17.9 232 666-931 41-272 (355)
3 KOG0610 Putative serine/threon 100.0 2.6E-47 5.6E-52 405.2 20.3 290 642-931 49-368 (459)
4 KOG0605 NDR and related serine 100.0 7.8E-47 1.7E-51 414.0 19.0 265 665-931 137-423 (550)
5 KOG0575 Polo-like serine/threo 100.0 3.4E-46 7.3E-51 415.4 19.1 232 669-931 18-249 (592)
6 KOG0595 Serine/threonine-prote 100.0 2.3E-45 5E-50 390.7 21.9 221 668-919 9-235 (429)
7 KOG0592 3-phosphoinositide-dep 100.0 1.9E-45 4E-50 402.3 16.2 248 666-931 70-318 (604)
8 KOG0615 Serine/threonine prote 100.0 1.6E-45 3.5E-50 390.8 9.5 234 668-931 171-417 (475)
9 KOG0694 Serine/threonine prote 100.0 5.9E-44 1.3E-48 401.4 19.3 228 664-921 363-591 (694)
10 KOG0581 Mitogen-activated prot 100.0 4.9E-43 1.1E-47 370.5 17.4 232 665-930 75-314 (364)
11 KOG0591 NIMA (never in mitosis 100.0 5E-44 1.1E-48 361.6 9.5 225 667-919 17-250 (375)
12 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-41 4.7E-46 364.3 17.6 241 666-931 94-352 (576)
13 KOG0580 Serine/threonine prote 100.0 4E-42 8.6E-47 341.7 10.1 235 666-931 19-253 (281)
14 KOG0597 Serine-threonine prote 100.0 1.8E-41 4E-46 370.0 15.5 223 668-921 1-223 (808)
15 KOG0583 Serine/threonine prote 100.0 1.3E-40 2.9E-45 373.3 21.5 235 666-930 14-254 (370)
16 KOG0690 Serine/threonine prote 100.0 4.3E-41 9.4E-46 345.2 13.5 235 665-930 164-398 (516)
17 KOG0611 Predicted serine/threo 100.0 5.2E-41 1.1E-45 353.0 14.0 224 668-921 52-276 (668)
18 KOG0593 Predicted protein kina 100.0 6.9E-41 1.5E-45 342.2 13.3 215 668-912 1-216 (396)
19 KOG0588 Serine/threonine prote 100.0 9.5E-41 2.1E-45 372.0 15.4 231 668-930 11-242 (786)
20 KOG0600 Cdc2-related protein k 100.0 7.4E-40 1.6E-44 355.8 17.4 217 667-912 115-334 (560)
21 KOG0033 Ca2+/calmodulin-depend 100.0 7.9E-41 1.7E-45 331.9 3.9 235 666-931 8-247 (355)
22 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-38 3.5E-43 360.9 22.6 261 669-931 1-271 (363)
23 KOG0612 Rho-associated, coiled 100.0 4.6E-40 9.9E-45 384.5 9.0 239 665-931 71-316 (1317)
24 KOG0582 Ste20-like serine/thre 100.0 4.4E-38 9.6E-43 337.2 21.8 233 662-919 19-253 (516)
25 KOG0661 MAPK related serine/th 100.0 4.1E-39 9E-44 347.6 12.4 223 666-920 7-234 (538)
26 KOG0659 Cdk activating kinase 100.0 7.6E-38 1.6E-42 315.4 19.3 214 669-912 2-216 (318)
27 KOG0599 Phosphorylase kinase g 100.0 4.9E-39 1.1E-43 323.5 9.9 234 668-931 16-263 (411)
28 PTZ00263 protein kinase A cata 100.0 5.4E-38 1.2E-42 351.7 19.3 231 666-930 15-245 (329)
29 KOG0663 Protein kinase PITSLRE 100.0 2.7E-38 5.8E-43 327.4 15.2 216 667-912 74-292 (419)
30 KOG0578 p21-activated serine/t 100.0 2.4E-38 5.3E-43 350.1 15.2 230 668-930 272-502 (550)
31 KOG0192 Tyrosine kinase specif 100.0 1.5E-37 3.2E-42 345.5 20.5 226 664-919 36-269 (362)
32 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-37 3.4E-42 355.2 21.3 260 670-931 2-283 (381)
33 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-37 2.6E-42 342.8 19.6 228 669-930 1-228 (291)
34 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-37 3.6E-42 355.2 20.9 259 670-930 2-282 (382)
35 cd05599 STKc_NDR_like Catalyti 100.0 1.5E-37 3.3E-42 353.2 20.3 260 669-930 1-273 (364)
36 cd05629 STKc_NDR_like_fungal C 100.0 9.6E-38 2.1E-42 356.5 18.6 260 669-930 1-282 (377)
37 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-37 3.6E-42 348.0 19.8 234 667-931 33-273 (382)
38 PTZ00426 cAMP-dependent protei 100.0 2.1E-37 4.5E-42 348.3 19.8 225 665-921 26-251 (340)
39 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-37 3.8E-42 352.1 18.5 261 669-931 1-271 (360)
40 cd05598 STKc_LATS Catalytic do 100.0 2.9E-37 6.3E-42 352.4 19.6 260 669-930 1-278 (376)
41 KOG0198 MEKK and related serin 100.0 1E-37 2.2E-42 336.5 14.8 234 668-931 16-256 (313)
42 cd05621 STKc_ROCK2 Catalytic d 100.0 2.1E-37 4.5E-42 352.3 18.0 236 666-930 40-281 (370)
43 cd05571 STKc_PKB Catalytic dom 100.0 3.8E-37 8.3E-42 344.0 19.6 217 675-920 1-217 (323)
44 cd05622 STKc_ROCK1 Catalytic d 100.0 4.1E-37 8.9E-42 350.1 19.7 237 665-930 39-281 (371)
45 cd05596 STKc_ROCK Catalytic do 100.0 5.1E-37 1.1E-41 349.3 18.8 237 665-930 39-281 (370)
46 KOG0667 Dual-specificity tyros 100.0 3.8E-37 8.3E-42 347.2 16.8 209 669-912 186-402 (586)
47 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-36 2.9E-41 337.9 20.4 215 677-920 1-215 (312)
48 KOG0696 Serine/threonine prote 100.0 9E-38 2E-42 329.2 10.1 228 665-921 345-573 (683)
49 cd05595 STKc_PKB_beta Catalyti 100.0 1.8E-36 4E-41 338.5 20.8 217 675-920 1-217 (323)
50 KOG0589 Serine/threonine prote 100.0 1.8E-37 3.9E-42 342.3 12.3 224 668-919 3-228 (426)
51 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-36 3.6E-41 339.5 20.3 217 675-920 1-217 (328)
52 KOG0594 Protein kinase PCTAIRE 100.0 2.3E-36 4.9E-41 320.2 19.6 216 668-912 10-235 (323)
53 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-36 3.9E-41 340.0 20.0 213 669-913 1-213 (333)
54 cd05587 STKc_cPKC Catalytic do 100.0 3.1E-36 6.6E-41 336.9 21.4 222 670-920 1-223 (324)
55 cd05616 STKc_cPKC_beta Catalyt 100.0 2.7E-36 5.9E-41 337.1 20.6 223 670-921 1-224 (323)
56 KOG0608 Warts/lats-like serine 100.0 2.6E-37 5.6E-42 340.2 11.6 264 665-930 625-905 (1034)
57 cd05631 STKc_GRK4 Catalytic do 100.0 5E-36 1.1E-40 328.8 20.5 222 670-919 1-226 (285)
58 KOG4717 Serine/threonine prote 100.0 7.5E-37 1.6E-41 329.8 13.6 230 669-930 18-249 (864)
59 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-36 4.2E-41 334.9 17.1 230 661-921 198-429 (468)
60 cd05615 STKc_cPKC_alpha Cataly 100.0 7E-36 1.5E-40 333.8 21.2 223 670-921 1-224 (323)
61 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-36 3.8E-41 342.4 16.5 260 669-930 1-264 (350)
62 cd05590 STKc_nPKC_eta Catalyti 100.0 5.7E-36 1.2E-40 334.1 20.4 218 675-921 1-219 (320)
63 KOG0986 G protein-coupled rece 100.0 5.5E-37 1.2E-41 328.2 11.4 237 664-930 180-420 (591)
64 KOG0607 MAP kinase-interacting 100.0 5.6E-37 1.2E-41 314.8 11.0 237 671-932 79-342 (463)
65 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-35 2.4E-40 332.3 22.4 220 671-920 1-223 (324)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 3.9E-36 8.6E-41 336.1 18.3 217 675-920 1-218 (325)
67 cd05591 STKc_nPKC_epsilon Cata 100.0 6.9E-36 1.5E-40 333.6 20.1 218 675-921 1-219 (321)
68 cd05592 STKc_nPKC_theta_delta 100.0 9.6E-36 2.1E-40 331.6 20.8 217 675-920 1-218 (316)
69 KOG0614 cGMP-dependent protein 100.0 1.1E-37 2.5E-42 336.5 4.8 228 664-921 415-644 (732)
70 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-35 2.5E-40 333.2 20.5 224 669-919 1-231 (331)
71 cd05624 STKc_MRCK_beta Catalyt 100.0 6.2E-36 1.3E-40 335.4 18.1 234 669-929 1-242 (331)
72 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-35 2.7E-40 331.7 19.5 217 675-920 1-218 (323)
73 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-35 4E-40 329.4 20.7 224 675-929 1-225 (316)
74 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-35 2.9E-40 331.3 19.5 217 675-920 1-218 (321)
75 cd05601 STKc_CRIK Catalytic do 100.0 5.3E-36 1.1E-40 335.8 16.3 235 669-930 1-243 (330)
76 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-35 3.4E-40 331.3 20.0 217 675-920 1-218 (325)
77 cd05623 STKc_MRCK_alpha Cataly 100.0 1.2E-35 2.6E-40 333.2 18.8 235 669-930 1-243 (332)
78 cd05584 STKc_p70S6K Catalytic 100.0 1.9E-35 4.2E-40 330.3 19.9 219 674-921 1-223 (323)
79 KOG0201 Serine/threonine prote 100.0 3.9E-37 8.5E-42 330.2 5.7 230 669-930 13-242 (467)
80 cd05588 STKc_aPKC Catalytic do 100.0 2.6E-35 5.6E-40 330.1 20.3 217 675-920 1-227 (329)
81 cd05619 STKc_nPKC_theta Cataly 100.0 3.8E-35 8.2E-40 326.8 21.3 217 675-920 1-218 (316)
82 KOG0695 Serine/threonine prote 100.0 6.6E-36 1.4E-40 307.7 13.6 231 662-921 243-482 (593)
83 cd05570 STKc_PKC Catalytic dom 100.0 4.4E-35 9.4E-40 326.7 20.6 217 675-920 1-218 (318)
84 cd05604 STKc_SGK3 Catalytic do 100.0 4.6E-35 9.9E-40 327.5 20.5 216 675-919 1-217 (325)
85 cd05618 STKc_aPKC_iota Catalyt 100.0 4.8E-35 1E-39 327.9 20.5 217 675-920 1-227 (329)
86 KOG0660 Mitogen-activated prot 100.0 2.2E-35 4.8E-40 311.2 15.7 216 668-912 21-242 (359)
87 cd05617 STKc_aPKC_zeta Catalyt 100.0 8.3E-35 1.8E-39 325.7 20.5 217 675-920 1-225 (327)
88 cd05586 STKc_Sck1_like Catalyt 100.0 4.6E-35 9.9E-40 328.2 16.2 215 677-920 1-219 (330)
89 KOG0586 Serine/threonine prote 100.0 3.2E-35 6.9E-40 328.1 14.7 231 664-925 51-282 (596)
90 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-34 6.5E-39 315.2 21.6 214 668-912 4-218 (288)
91 cd05605 STKc_GRK4_like Catalyt 100.0 3.9E-34 8.5E-39 313.8 22.4 208 670-905 1-208 (285)
92 KOG0658 Glycogen synthase kina 100.0 1.5E-35 3.2E-40 313.0 10.4 207 670-912 25-240 (364)
93 cd07848 STKc_CDKL5 Catalytic d 100.0 4E-34 8.7E-39 313.6 21.7 215 669-912 1-215 (287)
94 cd05582 STKc_RSK_N N-terminal 100.0 7.9E-35 1.7E-39 324.5 16.3 217 674-920 1-220 (318)
95 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-34 4.9E-39 322.9 20.0 223 670-920 1-233 (332)
96 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.9E-34 4.1E-39 324.3 19.3 223 665-914 3-294 (338)
97 PTZ00267 NIMA-related protein 100.0 4.4E-34 9.5E-39 335.8 23.3 221 668-916 66-289 (478)
98 KOG0193 Serine/threonine prote 100.0 4.5E-35 9.8E-40 324.5 13.0 224 662-916 385-611 (678)
99 KOG4236 Serine/threonine prote 100.0 1.5E-35 3.2E-40 320.5 8.9 229 671-931 564-799 (888)
100 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.7E-34 1.7E-38 314.3 22.0 212 668-910 4-217 (303)
101 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-33 2.3E-38 309.6 22.7 216 677-919 1-222 (280)
102 cd05607 STKc_GRK7 Catalytic do 100.0 8.5E-34 1.8E-38 309.8 21.6 214 677-918 1-218 (277)
103 cd05574 STKc_phototropin_like 100.0 2.1E-33 4.6E-38 312.6 24.7 261 669-929 1-263 (316)
104 cd06649 PKc_MEK2 Catalytic dom 100.0 3.8E-33 8.3E-38 312.8 26.6 210 666-908 2-212 (331)
105 KOG0604 MAP kinase-activated p 100.0 2.4E-35 5.2E-40 301.0 7.7 228 668-931 60-302 (400)
106 PTZ00283 serine/threonine prot 100.0 1.1E-33 2.5E-38 332.6 23.0 224 666-915 29-262 (496)
107 KOG1989 ARK protein kinase fam 100.0 1.1E-34 2.3E-39 337.3 13.4 242 665-931 33-287 (738)
108 PHA03212 serine/threonine kina 100.0 1.9E-33 4.2E-38 321.7 23.5 197 666-900 89-285 (391)
109 cd07862 STKc_CDK6 Catalytic do 100.0 2E-33 4.3E-38 308.7 22.0 214 669-912 1-223 (290)
110 cd05580 STKc_PKA Catalytic dom 100.0 2.6E-33 5.6E-38 308.0 22.1 221 669-921 1-221 (290)
111 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.1E-33 4.5E-38 315.5 21.7 211 670-908 1-218 (338)
112 PHA02988 hypothetical protein; 100.0 2.6E-33 5.6E-38 307.0 21.3 221 675-929 26-253 (283)
113 KOG0577 Serine/threonine prote 100.0 6.7E-35 1.5E-39 319.3 8.4 212 670-914 27-241 (948)
114 cd05632 STKc_GRK5 Catalytic do 100.0 5.3E-33 1.2E-37 304.8 23.4 211 670-908 1-211 (285)
115 KOG0596 Dual specificity; seri 100.0 6.6E-34 1.4E-38 311.4 15.8 226 665-920 357-597 (677)
116 KOG0574 STE20-like serine/thre 100.0 1.6E-35 3.4E-40 301.3 2.8 209 670-911 34-242 (502)
117 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.8E-33 8.3E-38 302.7 21.7 220 666-914 2-225 (266)
118 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-32 2.2E-37 309.6 25.8 209 666-907 2-211 (333)
119 cd05106 PTKc_CSF-1R Catalytic 100.0 1.9E-33 4.1E-38 320.3 19.2 225 665-916 34-333 (374)
120 KOG0579 Ste20-like serine/thre 100.0 1.1E-34 2.4E-39 318.8 8.7 216 669-915 32-252 (1187)
121 PRK13184 pknD serine/threonine 100.0 8.8E-33 1.9E-37 333.6 25.2 230 668-906 1-239 (932)
122 cd07876 STKc_JNK2 Catalytic do 100.0 6.7E-33 1.5E-37 314.4 22.0 208 668-909 20-233 (359)
123 PLN00034 mitogen-activated pro 100.0 8.9E-33 1.9E-37 312.7 22.7 201 666-901 71-276 (353)
124 PTZ00036 glycogen synthase kin 100.0 7.4E-33 1.6E-37 321.8 22.5 209 668-912 65-285 (440)
125 cd05630 STKc_GRK6 Catalytic do 100.0 7.9E-33 1.7E-37 303.5 21.5 205 670-902 1-205 (285)
126 KOG4250 TANK binding protein k 100.0 9.4E-34 2E-38 320.0 14.1 213 670-912 14-242 (732)
127 cd07853 STKc_NLK Catalytic dom 100.0 9.4E-33 2E-37 314.8 22.4 213 670-912 1-219 (372)
128 cd08219 STKc_Nek3 Catalytic do 100.0 1E-32 2.2E-37 297.0 21.4 218 670-916 1-218 (255)
129 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-32 2.7E-37 312.8 22.5 211 668-912 23-239 (364)
130 cd05104 PTKc_Kit Catalytic dom 100.0 6.5E-33 1.4E-37 316.2 20.0 223 665-914 31-333 (375)
131 PTZ00284 protein kinase; Provi 100.0 1.3E-32 2.8E-37 323.0 22.8 215 667-918 127-365 (467)
132 KOG4721 Serine/threonine prote 100.0 3.6E-34 7.8E-39 312.5 8.9 212 665-918 120-331 (904)
133 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-32 2.4E-37 302.3 20.6 213 670-912 1-221 (288)
134 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-32 3.2E-37 304.1 21.7 217 667-910 3-254 (304)
135 PTZ00266 NIMA-related protein 100.0 1.3E-32 2.8E-37 333.2 23.0 224 666-918 10-263 (1021)
136 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.8E-32 3.8E-37 304.3 22.3 213 668-911 5-218 (309)
137 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-32 5E-37 293.9 22.5 218 670-915 1-218 (256)
138 KOG0194 Protein tyrosine kinas 100.0 3.3E-33 7.2E-38 314.4 16.1 229 662-919 150-384 (474)
139 cd05052 PTKc_Abl Catalytic dom 100.0 2.3E-32 4.9E-37 295.9 22.1 218 666-913 3-221 (263)
140 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-32 3.4E-37 296.6 20.8 223 665-919 2-225 (261)
141 KOG4279 Serine/threonine prote 100.0 4.1E-34 9E-39 317.5 8.3 222 676-930 582-811 (1226)
142 cd05609 STKc_MAST Catalytic do 100.0 3E-32 6.5E-37 301.8 23.3 238 669-920 1-238 (305)
143 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-32 3.8E-37 310.5 21.6 211 667-911 15-231 (355)
144 cd05048 PTKc_Ror Catalytic Dom 100.0 3.4E-32 7.5E-37 297.6 23.0 222 667-915 3-244 (283)
145 cd06625 STKc_MEKK3_like Cataly 100.0 3.5E-32 7.5E-37 293.9 22.0 220 669-914 2-223 (263)
146 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.3E-32 7.2E-37 311.8 22.0 226 663-915 31-357 (400)
147 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-32 4.6E-37 308.3 20.2 210 668-912 14-230 (343)
148 cd05049 PTKc_Trk Catalytic dom 100.0 3.9E-32 8.6E-37 296.5 21.0 225 667-918 3-245 (280)
149 cd05093 PTKc_TrkB Catalytic do 100.0 7.3E-32 1.6E-36 296.2 22.7 221 667-915 3-240 (288)
150 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.9E-32 8.4E-37 293.4 19.9 214 669-913 6-220 (261)
151 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-31 2.9E-36 288.3 23.9 218 670-915 1-219 (257)
152 cd06645 STKc_MAP4K3 Catalytic 100.0 6.6E-32 1.4E-36 292.7 21.7 219 668-918 8-229 (267)
153 KOG2345 Serine/threonine prote 100.0 6.4E-34 1.4E-38 284.3 5.2 245 665-930 17-275 (302)
154 cd08228 STKc_Nek6 Catalytic do 100.0 6.5E-32 1.4E-36 292.6 21.3 217 669-912 2-222 (267)
155 cd06646 STKc_MAP4K5 Catalytic 100.0 4.5E-32 9.8E-37 294.0 20.0 218 668-917 8-228 (267)
156 cd08221 STKc_Nek9 Catalytic do 100.0 9.9E-32 2.1E-36 289.3 22.4 219 670-916 1-219 (256)
157 KOG1187 Serine/threonine prote 100.0 2.4E-32 5.3E-37 306.0 18.3 203 668-901 74-281 (361)
158 cd05068 PTKc_Frk_like Catalyti 100.0 7.1E-32 1.5E-36 291.5 21.3 217 666-913 3-220 (261)
159 cd05108 PTKc_EGFR Catalytic do 100.0 5.7E-32 1.2E-36 301.2 21.1 224 666-919 4-232 (316)
160 cd05090 PTKc_Ror1 Catalytic do 100.0 7.8E-32 1.7E-36 295.0 21.4 221 667-914 3-243 (283)
161 cd05088 PTKc_Tie2 Catalytic do 100.0 5.5E-32 1.2E-36 299.6 20.4 218 666-913 4-239 (303)
162 KOG0983 Mitogen-activated prot 100.0 5.4E-33 1.2E-37 280.3 11.1 229 667-927 90-325 (391)
163 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.2E-31 2.5E-36 289.0 22.2 217 667-915 2-219 (256)
164 cd06619 PKc_MKK5 Catalytic dom 100.0 9E-32 2E-36 294.0 21.4 195 669-900 1-195 (279)
165 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.1E-31 2.4E-36 296.7 22.0 214 667-911 4-218 (301)
166 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-31 2.6E-36 295.0 21.9 215 668-913 11-230 (292)
167 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-31 2.9E-36 293.0 22.2 213 670-913 6-223 (282)
168 cd06652 STKc_MEKK2 Catalytic d 100.0 1.4E-31 3E-36 290.0 22.1 217 669-911 2-222 (265)
169 cd08229 STKc_Nek7 Catalytic do 100.0 9.3E-32 2E-36 291.4 20.7 218 669-913 2-223 (267)
170 cd06611 STKc_SLK_like Catalyti 100.0 9.5E-32 2E-36 293.7 20.9 216 668-914 4-224 (280)
171 cd05032 PTKc_InsR_like Catalyt 100.0 9.2E-32 2E-36 293.1 20.7 223 665-914 2-238 (277)
172 KOG0584 Serine/threonine prote 100.0 4.2E-33 9.2E-38 311.3 10.2 213 672-916 43-262 (632)
173 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-31 7.7E-36 293.8 25.7 209 669-910 1-210 (308)
174 cd05054 PTKc_VEGFR Catalytic d 100.0 6.8E-32 1.5E-36 303.3 20.2 221 664-911 2-289 (337)
175 cd05055 PTKc_PDGFR Catalytic d 100.0 1.2E-31 2.6E-36 296.7 21.8 224 665-915 31-261 (302)
176 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-31 3.9E-36 291.1 22.9 223 666-915 3-239 (277)
177 PHA03207 serine/threonine kina 100.0 1.1E-31 2.4E-36 308.0 22.3 200 667-902 90-291 (392)
178 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-31 2.4E-36 290.5 20.9 216 666-913 3-219 (262)
179 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-31 2.4E-36 289.9 20.7 217 665-913 2-219 (260)
180 KOG0662 Cyclin-dependent kinas 100.0 1.6E-32 3.5E-37 260.8 12.3 214 669-912 2-217 (292)
181 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-31 2.8E-36 291.1 21.0 213 669-912 6-230 (272)
182 PF00069 Pkinase: Protein kina 100.0 1.3E-31 2.9E-36 288.5 20.9 202 671-902 1-203 (260)
183 cd05066 PTKc_EphR_A Catalytic 100.0 1.5E-31 3.2E-36 290.2 21.3 225 667-919 2-230 (267)
184 cd08227 PK_STRAD_alpha Pseudok 100.0 2.6E-31 5.6E-36 297.5 23.8 222 672-914 1-226 (327)
185 cd05091 PTKc_Ror2 Catalytic do 100.0 1.9E-31 4.2E-36 291.7 22.3 223 666-915 2-244 (283)
186 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-31 4.2E-36 290.3 22.0 214 669-914 1-214 (274)
187 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-31 3.2E-36 295.1 21.0 209 669-910 20-228 (296)
188 cd05082 PTKc_Csk Catalytic dom 100.0 2.2E-31 4.8E-36 286.9 21.1 212 665-913 2-215 (256)
189 cd05059 PTKc_Tec_like Catalyti 100.0 2E-31 4.3E-36 287.3 20.7 214 668-913 3-217 (256)
190 PHA03211 serine/threonine kina 100.0 3E-31 6.5E-36 307.7 23.4 197 667-899 167-363 (461)
191 cd07861 STKc_CDK1_euk Catalyti 100.0 3.2E-31 6.9E-36 290.1 22.4 212 670-910 1-214 (285)
192 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-31 5.9E-36 287.4 21.7 219 669-914 2-224 (267)
193 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.4E-31 7.5E-36 286.8 22.4 218 669-912 2-223 (264)
194 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.8E-31 4E-36 288.2 20.2 216 666-913 3-219 (260)
195 cd06613 STKc_MAP4K3_like Catal 100.0 5.2E-31 1.1E-35 284.4 23.7 217 669-916 3-222 (262)
196 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.3E-31 5E-36 295.1 21.4 223 665-914 14-259 (307)
197 KOG1026 Nerve growth factor re 100.0 2.6E-32 5.6E-37 315.8 14.2 230 666-922 483-731 (774)
198 KOG0984 Mitogen-activated prot 100.0 5.1E-32 1.1E-36 263.5 13.9 225 664-919 41-275 (282)
199 cd05061 PTKc_InsR Catalytic do 100.0 5E-31 1.1E-35 289.6 23.5 223 665-914 2-238 (288)
200 cd05053 PTKc_FGFR Catalytic do 100.0 2E-31 4.3E-36 293.2 20.3 226 662-914 5-251 (293)
201 cd05089 PTKc_Tie1 Catalytic do 100.0 3.4E-31 7.3E-36 292.3 21.9 216 669-914 2-235 (297)
202 cd05109 PTKc_HER2 Catalytic do 100.0 4.3E-31 9.4E-36 288.5 22.4 219 666-913 4-227 (279)
203 cd05116 PTKc_Syk Catalytic dom 100.0 4.2E-31 9.1E-36 285.0 22.0 225 676-930 2-230 (257)
204 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.2E-31 6.9E-36 303.6 22.2 225 664-915 32-359 (401)
205 cd05578 STKc_Yank1 Catalytic d 100.0 2E-31 4.4E-36 287.4 19.4 220 670-919 1-223 (258)
206 cd05033 PTKc_EphR Catalytic do 100.0 4.4E-31 9.5E-36 286.2 22.1 218 668-913 3-224 (266)
207 cd05034 PTKc_Src_like Catalyti 100.0 6.2E-31 1.3E-35 284.0 23.2 218 665-913 2-220 (261)
208 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.6E-31 7.8E-36 285.5 21.3 218 667-916 2-220 (256)
209 cd05084 PTKc_Fes Catalytic dom 100.0 5.2E-31 1.1E-35 283.2 22.2 211 675-913 1-212 (252)
210 cd07868 STKc_CDK8 Catalytic do 100.0 2.4E-31 5.2E-36 296.1 20.2 199 674-902 6-220 (317)
211 cd05101 PTKc_FGFR2 Catalytic d 100.0 4E-31 8.6E-36 292.7 21.7 223 665-914 11-256 (304)
212 KOG1151 Tousled-like protein k 100.0 7.9E-33 1.7E-37 294.0 7.6 242 668-931 462-721 (775)
213 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.3E-31 1.8E-35 284.0 23.6 220 670-912 1-226 (267)
214 cd05111 PTK_HER3 Pseudokinase 100.0 7.2E-31 1.6E-35 287.0 23.3 220 666-914 4-228 (279)
215 cd05065 PTKc_EphR_B Catalytic 100.0 4.2E-31 9.1E-36 286.9 21.2 220 668-912 3-226 (269)
216 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.9E-31 1.1E-35 286.1 21.7 220 667-913 3-226 (268)
217 cd05092 PTKc_TrkA Catalytic do 100.0 4.5E-31 9.8E-36 288.7 21.6 220 667-914 3-241 (280)
218 cd05069 PTKc_Yes Catalytic dom 100.0 4.3E-31 9.4E-36 285.4 21.2 216 666-913 3-219 (260)
219 cd05572 STKc_cGK_PKG Catalytic 100.0 5.6E-31 1.2E-35 284.6 21.8 214 677-920 1-218 (262)
220 cd08218 STKc_Nek1 Catalytic do 100.0 6.8E-31 1.5E-35 282.8 22.2 218 670-915 1-218 (256)
221 cd06655 STKc_PAK2 Catalytic do 100.0 4.5E-31 9.8E-36 291.2 21.3 211 669-912 19-229 (296)
222 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.8E-31 1.7E-35 287.0 23.0 212 669-910 1-213 (286)
223 cd05051 PTKc_DDR Catalytic dom 100.0 5.8E-31 1.3E-35 289.8 21.9 219 667-912 3-248 (296)
224 cd06656 STKc_PAK3 Catalytic do 100.0 3.3E-31 7.1E-36 292.5 19.8 205 669-906 19-223 (297)
225 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-31 7.8E-36 290.0 20.0 205 666-903 2-207 (284)
226 cd05046 PTK_CCK4 Pseudokinase 100.0 4.6E-31 9.9E-36 287.4 20.6 227 667-921 3-242 (275)
227 cd05073 PTKc_Hck Catalytic dom 100.0 6.7E-31 1.4E-35 283.9 21.7 217 665-913 2-219 (260)
228 cd05075 PTKc_Axl Catalytic dom 100.0 8.8E-31 1.9E-35 284.6 22.7 219 671-915 1-232 (272)
229 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.5E-31 1.4E-35 292.5 22.1 224 664-914 7-253 (314)
230 cd05035 PTKc_Axl_like Catalyti 100.0 6.9E-31 1.5E-35 285.3 21.8 218 671-914 1-232 (273)
231 KOG0671 LAMMER dual specificit 100.0 1.4E-32 3.1E-37 290.5 8.2 219 668-921 88-332 (415)
232 cd05577 STKc_GRK Catalytic dom 100.0 7E-31 1.5E-35 286.6 21.9 199 677-903 1-199 (277)
233 cd05094 PTKc_TrkC Catalytic do 100.0 9.5E-31 2.1E-35 287.8 22.8 221 668-916 4-244 (291)
234 cd08220 STKc_Nek8 Catalytic do 100.0 7.9E-31 1.7E-35 281.9 21.6 217 670-915 1-218 (256)
235 cd05040 PTKc_Ack_like Catalyti 100.0 8.5E-31 1.8E-35 282.2 21.9 213 675-914 1-217 (257)
236 cd06651 STKc_MEKK3 Catalytic d 100.0 1E-30 2.2E-35 283.5 22.5 217 669-911 2-222 (266)
237 cd05036 PTKc_ALK_LTK Catalytic 100.0 1E-30 2.2E-35 285.4 22.5 220 667-913 4-237 (277)
238 cd05606 STKc_beta_ARK Catalyti 100.0 6.7E-31 1.4E-35 287.1 21.1 213 676-919 1-220 (278)
239 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.8E-31 1.7E-35 287.4 21.2 209 669-908 1-217 (286)
240 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.2E-31 1.1E-35 288.2 19.8 213 668-911 15-239 (282)
241 PRK13560 hypothetical protein; 100.0 5.2E-30 1.1E-34 321.6 31.5 407 141-595 164-597 (807)
242 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.5E-31 1.6E-35 295.8 21.0 221 666-913 4-298 (343)
243 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-30 2.9E-35 286.4 22.4 217 670-913 1-245 (290)
244 cd05633 STKc_GRK3 Catalytic do 100.0 1E-30 2.2E-35 285.9 21.3 196 676-902 1-200 (279)
245 cd05611 STKc_Rim15_like Cataly 100.0 1.9E-30 4.1E-35 280.1 23.2 213 675-920 2-215 (260)
246 cd05579 STKc_MAST_like Catalyt 100.0 8.4E-31 1.8E-35 282.7 20.3 224 677-921 1-224 (265)
247 cd05100 PTKc_FGFR3 Catalytic d 100.0 1E-30 2.2E-35 293.6 21.8 225 663-914 6-253 (334)
248 cd05610 STKc_MASTL Catalytic d 100.0 2E-30 4.4E-35 315.3 26.1 151 668-820 3-153 (669)
249 cd06640 STKc_MST4 Catalytic do 100.0 2.4E-30 5.2E-35 282.4 23.9 212 669-912 4-215 (277)
250 cd05039 PTKc_Csk_like Catalyti 100.0 2.6E-30 5.6E-35 278.4 23.8 212 666-913 3-215 (256)
251 cd07839 STKc_CDK5 Catalytic do 100.0 5.6E-31 1.2E-35 288.1 18.9 212 670-911 1-214 (284)
252 cd06631 STKc_YSK4 Catalytic do 100.0 1.9E-30 4.1E-35 281.0 22.8 220 670-913 1-223 (265)
253 cd00192 PTKc Catalytic domain 100.0 1.7E-30 3.6E-35 279.7 22.2 212 675-913 1-223 (262)
254 cd05097 PTKc_DDR_like Catalyti 100.0 8.1E-31 1.7E-35 288.9 20.2 217 668-911 4-246 (295)
255 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-30 3.6E-35 283.8 22.5 219 667-914 5-228 (279)
256 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-30 3.3E-35 281.4 21.9 220 669-913 1-222 (267)
257 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-30 2.7E-35 286.2 21.5 222 667-915 3-250 (288)
258 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-30 2.6E-35 286.7 21.3 204 668-902 4-208 (291)
259 cd06658 STKc_PAK5 Catalytic do 100.0 5.9E-31 1.3E-35 289.7 18.8 211 669-912 22-232 (292)
260 cd05083 PTKc_Chk Catalytic dom 100.0 9.1E-31 2E-35 281.7 19.8 209 667-913 4-213 (254)
261 cd07832 STKc_CCRK Catalytic do 100.0 1.6E-30 3.5E-35 284.5 22.0 214 670-912 1-215 (286)
262 cd05042 PTKc_Aatyk Catalytic d 100.0 3.1E-30 6.8E-35 280.0 23.5 218 675-919 1-232 (269)
263 PHA03209 serine/threonine kina 100.0 6.2E-31 1.3E-35 298.0 18.6 195 667-900 64-259 (357)
264 PLN00009 cyclin-dependent kina 100.0 3E-30 6.6E-35 284.0 23.4 214 669-911 2-217 (294)
265 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-30 2.3E-35 286.1 19.6 213 669-911 1-214 (286)
266 cd05060 PTKc_Syk_like Catalyti 100.0 2.2E-30 4.8E-35 279.2 21.7 211 675-914 1-215 (257)
267 cd07841 STKc_CDK7 Catalytic do 100.0 2E-30 4.3E-35 286.0 21.8 214 670-912 1-217 (298)
268 cd06659 STKc_PAK6 Catalytic do 100.0 1.7E-30 3.7E-35 286.8 21.2 212 669-913 21-232 (297)
269 cd05115 PTKc_Zap-70 Catalytic 100.0 2.6E-30 5.6E-35 279.0 22.1 211 676-914 2-215 (257)
270 cd06612 STKc_MST1_2 Catalytic 100.0 3.1E-30 6.8E-35 277.3 22.5 209 669-910 3-211 (256)
271 cd07850 STKc_JNK Catalytic dom 100.0 2.1E-30 4.6E-35 293.3 22.2 210 668-911 15-230 (353)
272 KOG1095 Protein tyrosine kinas 100.0 7.3E-31 1.6E-35 314.4 19.3 230 666-922 689-930 (1025)
273 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-30 4.7E-35 282.3 21.4 243 669-920 1-244 (280)
274 cd05095 PTKc_DDR2 Catalytic do 100.0 1.9E-30 4.1E-35 286.2 20.9 216 668-910 4-246 (296)
275 cd05047 PTKc_Tie Catalytic dom 100.0 2.8E-30 6.1E-35 280.8 21.9 209 675-913 1-227 (270)
276 cd06632 STKc_MEKK1_plant Catal 100.0 3.4E-30 7.5E-35 277.2 22.2 213 670-912 1-216 (258)
277 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-32 2.4E-37 326.7 3.0 235 668-930 1234-1473(1509)
278 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-30 4.2E-35 283.0 20.3 212 669-912 4-215 (277)
279 cd06635 STKc_TAO1 Catalytic do 100.0 3.7E-30 8.1E-35 286.8 22.9 213 670-915 26-241 (317)
280 cd05085 PTKc_Fer Catalytic dom 100.0 5.2E-30 1.1E-34 274.9 23.1 209 675-913 1-210 (250)
281 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.2E-30 7E-35 283.4 21.6 205 668-903 4-209 (291)
282 cd06608 STKc_myosinIII_like Ca 100.0 2.3E-30 5E-35 281.1 20.1 215 668-913 5-233 (275)
283 cd07836 STKc_Pho85 Catalytic d 100.0 3.8E-30 8.3E-35 281.4 21.9 213 670-912 1-215 (284)
284 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-30 5.2E-35 280.3 20.1 209 670-903 1-213 (268)
285 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-30 2.6E-35 287.4 18.0 208 668-908 18-225 (293)
286 cd07860 STKc_CDK2_3 Catalytic 100.0 2.2E-30 4.7E-35 283.5 19.9 213 670-911 1-214 (284)
287 cd06648 STKc_PAK_II Catalytic 100.0 3.9E-30 8.5E-35 282.1 22.0 212 670-914 20-231 (285)
288 cd06626 STKc_MEKK4 Catalytic d 100.0 4.1E-30 9E-35 277.7 21.8 226 670-921 1-231 (264)
289 PHA03210 serine/threonine kina 100.0 1E-30 2.2E-35 308.5 18.4 205 668-899 147-369 (501)
290 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-30 3.6E-35 281.1 18.5 213 669-913 1-219 (265)
291 cd05056 PTKc_FAK Catalytic dom 100.0 3.5E-30 7.6E-35 279.8 21.1 218 667-914 4-225 (270)
292 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.1E-30 8.9E-35 279.4 21.6 215 670-911 2-225 (272)
293 cd07867 STKc_CDC2L6 Catalytic 100.0 2.3E-30 5E-35 288.1 20.0 198 675-902 7-220 (317)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 3.2E-30 6.9E-35 283.7 20.9 214 668-911 4-220 (293)
295 cd05110 PTKc_HER4 Catalytic do 100.0 4.2E-30 9.1E-35 284.5 21.8 218 666-912 4-226 (303)
296 cd06607 STKc_TAO Catalytic dom 100.0 4.1E-30 8.9E-35 285.0 21.7 211 669-912 15-228 (307)
297 cd07833 STKc_CDKL Catalytic do 100.0 3.4E-30 7.4E-35 282.2 20.7 214 669-911 1-215 (288)
298 cd08217 STKc_Nek2 Catalytic do 100.0 6.3E-30 1.4E-34 275.9 22.4 218 670-915 1-227 (265)
299 cd06917 STKc_NAK1_like Catalyt 100.0 3.3E-30 7.2E-35 280.9 20.4 209 670-910 2-214 (277)
300 cd08225 STKc_Nek5 Catalytic do 100.0 3.9E-30 8.4E-35 276.8 20.5 218 670-915 1-219 (257)
301 cd06638 STKc_myosinIIIA Cataly 100.0 4.3E-30 9.4E-35 281.4 21.0 213 668-911 17-242 (286)
302 cd07845 STKc_CDK10 Catalytic d 100.0 4.9E-30 1.1E-34 284.7 21.6 216 667-912 5-223 (309)
303 cd06623 PKc_MAPKK_plant_like C 100.0 5.9E-30 1.3E-34 276.3 21.7 213 669-912 1-217 (264)
304 cd05112 PTKc_Itk Catalytic dom 100.0 7.4E-30 1.6E-34 274.7 22.4 215 668-914 3-218 (256)
305 cd06633 STKc_TAO3 Catalytic do 100.0 1E-29 2.2E-34 282.7 24.2 212 670-914 22-236 (313)
306 PF07714 Pkinase_Tyr: Protein 100.0 3.7E-30 8.1E-35 278.2 19.9 217 672-915 2-223 (259)
307 PHA02882 putative serine/threo 100.0 8.5E-30 1.8E-34 280.8 23.1 214 666-902 9-237 (294)
308 smart00219 TyrKc Tyrosine kina 100.0 6.5E-30 1.4E-34 274.8 21.4 217 671-915 1-222 (258)
309 cd05043 PTK_Ryk Pseudokinase d 100.0 6.9E-30 1.5E-34 279.0 21.8 221 666-913 3-235 (280)
310 cd07837 STKc_CdkB_plant Cataly 100.0 7.2E-30 1.6E-34 281.0 22.1 215 669-912 1-226 (295)
311 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.9E-30 1.3E-34 280.1 21.2 203 669-900 3-212 (283)
312 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.9E-30 8.5E-35 281.2 19.7 213 669-912 1-222 (283)
313 cd07842 STKc_CDK8_like Catalyt 100.0 4.9E-30 1.1E-34 285.1 20.6 209 670-903 1-221 (316)
314 KOG1006 Mitogen-activated prot 100.0 3.5E-32 7.6E-37 273.7 2.8 223 666-919 61-291 (361)
315 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-29 2.5E-34 277.1 22.8 212 670-913 5-216 (277)
316 KOG1035 eIF-2alpha kinase GCN2 100.0 7.3E-31 1.6E-35 310.2 14.3 237 667-918 477-836 (1351)
317 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-29 2.2E-34 278.3 22.3 205 668-900 3-213 (284)
318 KOG0666 Cyclin C-dependent kin 100.0 2.1E-31 4.6E-36 273.2 8.1 208 668-901 23-243 (438)
319 cd05123 STKc_AGC Catalytic dom 100.0 1.6E-29 3.4E-34 270.8 23.1 215 677-920 1-215 (250)
320 cd05044 PTKc_c-ros Catalytic d 100.0 3.8E-30 8.2E-35 279.1 18.4 212 675-913 1-229 (269)
321 cd06639 STKc_myosinIIIB Cataly 100.0 1.3E-29 2.8E-34 278.6 22.8 215 668-913 21-248 (291)
322 cd05041 PTKc_Fes_like Catalyti 100.0 1E-29 2.2E-34 272.8 21.5 210 675-913 1-211 (251)
323 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-29 2.6E-34 278.7 22.3 222 670-919 1-233 (290)
324 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.8E-30 1.5E-34 279.9 20.2 204 669-899 4-213 (284)
325 cd06614 STKc_PAK Catalytic dom 100.0 9.3E-30 2E-34 279.0 21.3 214 668-913 18-231 (286)
326 PHA03390 pk1 serine/threonine- 100.0 6.1E-30 1.3E-34 277.9 19.6 195 669-904 14-212 (267)
327 cd07835 STKc_CDK1_like Catalyt 100.0 9.7E-30 2.1E-34 278.2 21.2 213 671-912 1-214 (283)
328 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-29 3.3E-34 274.7 22.6 210 675-911 1-223 (269)
329 cd07849 STKc_ERK1_2_like Catal 100.0 7.8E-30 1.7E-34 286.6 20.8 213 668-910 4-222 (336)
330 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3E-30 6.6E-35 278.5 16.8 209 675-919 1-226 (258)
331 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-29 2.9E-34 280.7 22.1 219 668-912 11-238 (310)
332 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-29 3.5E-34 284.9 22.9 211 668-913 14-231 (343)
333 cd08528 STKc_Nek10 Catalytic d 100.0 1.1E-29 2.5E-34 275.5 20.9 219 670-916 1-231 (269)
334 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-29 6.8E-34 275.1 24.6 213 669-912 1-222 (287)
335 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-29 4.1E-34 282.5 23.0 223 675-918 4-230 (328)
336 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-29 4.3E-34 284.4 22.9 210 668-912 16-232 (345)
337 cd06634 STKc_TAO2 Catalytic do 100.0 1.4E-29 2.9E-34 281.1 21.0 214 669-915 15-231 (308)
338 KOG4257 Focal adhesion tyrosin 100.0 3.4E-30 7.5E-35 284.1 15.6 226 667-922 387-618 (974)
339 cd08215 STKc_Nek Catalytic dom 100.0 2.9E-29 6.4E-34 269.3 22.6 218 670-915 1-220 (258)
340 cd05058 PTKc_Met_Ron Catalytic 100.0 4.6E-29 9.9E-34 269.5 24.0 214 675-914 1-219 (262)
341 cd07855 STKc_ERK5 Catalytic do 100.0 7.6E-30 1.7E-34 286.4 18.6 216 669-911 5-225 (334)
342 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-29 3E-34 274.2 19.9 198 675-907 1-219 (262)
343 KOG1152 Signal transduction se 100.0 9.4E-31 2E-35 287.3 10.6 202 668-900 560-771 (772)
344 cd06616 PKc_MKK4 Catalytic dom 100.0 9.2E-30 2E-34 279.2 18.5 204 668-902 3-214 (288)
345 cd08530 STKc_CNK2-like Catalyt 100.0 2.7E-29 5.9E-34 269.8 21.8 216 670-915 1-218 (256)
346 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-29 6.1E-34 274.1 22.2 208 671-911 1-212 (282)
347 KOG0199 ACK and related non-re 100.0 3.6E-30 7.7E-35 287.4 14.9 227 668-921 109-340 (1039)
348 cd06657 STKc_PAK4 Catalytic do 100.0 2.7E-29 5.8E-34 276.6 21.7 209 671-912 22-230 (292)
349 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.6E-29 7.9E-34 272.0 21.8 218 671-914 1-232 (273)
350 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-30 2.5E-35 295.4 10.0 234 659-920 619-856 (996)
351 cd07838 STKc_CDK4_6_like Catal 100.0 4.1E-29 8.8E-34 273.4 21.9 212 671-912 1-220 (287)
352 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-29 4.2E-34 283.6 19.8 211 669-910 5-221 (337)
353 cd07840 STKc_CDK9_like Catalyt 100.0 3.4E-29 7.3E-34 273.9 21.1 213 671-912 1-216 (287)
354 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.4E-29 9.5E-34 272.2 21.7 207 676-918 2-241 (274)
355 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.6E-29 1.4E-33 269.7 23.0 212 675-913 1-224 (268)
356 KOG0603 Ribosomal protein S6 k 100.0 2.5E-30 5.5E-35 290.5 11.9 221 667-931 320-543 (612)
357 cd06624 STKc_ASK Catalytic dom 100.0 5.5E-29 1.2E-33 270.1 22.1 203 669-902 8-215 (268)
358 cd05122 PKc_STE Catalytic doma 100.0 7.2E-29 1.6E-33 265.0 22.2 210 670-911 1-210 (253)
359 cd07866 STKc_BUR1 Catalytic do 100.0 3.6E-29 7.9E-34 277.3 20.6 226 668-912 7-241 (311)
360 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-28 2.6E-33 264.4 23.9 213 670-912 1-213 (254)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5E-29 1.1E-33 279.1 21.5 205 668-907 9-215 (328)
362 cd07857 STKc_MPK1 Catalytic do 100.0 6.8E-29 1.5E-33 278.5 22.3 216 670-912 1-224 (332)
363 cd06606 STKc_MAPKKK Catalytic 100.0 7.8E-29 1.7E-33 265.9 21.7 214 670-911 1-217 (260)
364 cd07864 STKc_CDK12 Catalytic d 100.0 4.7E-29 1E-33 275.4 20.6 217 667-912 5-232 (302)
365 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.2E-29 9E-34 272.9 19.9 207 668-901 3-215 (284)
366 cd07852 STKc_MAPK15 Catalytic 100.0 4.5E-29 9.7E-34 280.6 20.6 218 668-912 6-227 (337)
367 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.1E-29 1.3E-33 267.7 20.9 196 675-907 1-216 (259)
368 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-28 2.8E-33 273.8 23.9 206 681-907 12-219 (314)
369 PTZ00024 cyclin-dependent prot 100.0 7.6E-29 1.6E-33 278.4 21.9 228 669-912 8-248 (335)
370 cd05583 STKc_MSK_N N-terminal 100.0 9.9E-29 2.1E-33 271.2 21.9 222 670-919 1-233 (288)
371 cd07834 STKc_MAPK Catalytic do 100.0 3.6E-29 7.8E-34 280.3 18.3 216 670-913 1-222 (330)
372 KOG0587 Traf2- and Nck-interac 100.0 1.9E-29 4.1E-34 290.0 16.0 214 668-912 18-242 (953)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 6.7E-29 1.4E-33 279.8 20.4 209 668-912 14-229 (342)
374 KOG4278 Protein tyrosine kinas 100.0 1.7E-29 3.6E-34 277.8 14.5 230 662-921 260-491 (1157)
375 cd05118 STKc_CMGC Catalytic do 100.0 8.7E-29 1.9E-33 270.2 20.0 212 671-912 1-213 (283)
376 cd07851 STKc_p38 Catalytic dom 100.0 5.8E-29 1.3E-33 280.4 19.1 211 668-913 14-231 (343)
377 cd06618 PKc_MKK7 Catalytic dom 100.0 8.8E-29 1.9E-33 272.8 20.0 219 664-914 10-235 (296)
378 cd07829 STKc_CDK_like Catalyti 100.0 8.7E-29 1.9E-33 270.1 19.3 212 671-912 1-213 (282)
379 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.9E-29 2.2E-33 278.4 20.2 214 668-912 4-233 (342)
380 cd07830 STKc_MAK_like Catalyti 100.0 9.2E-29 2E-33 270.3 19.2 211 671-912 1-213 (283)
381 cd08222 STKc_Nek11 Catalytic d 100.0 9.8E-29 2.1E-33 266.7 19.1 217 670-914 1-221 (260)
382 KOG1094 Discoidin domain recep 100.0 2.2E-29 4.9E-34 276.6 13.8 217 666-910 535-753 (807)
383 KOG0668 Casein kinase II, alph 100.0 2.3E-29 5E-34 248.2 9.8 206 667-911 36-247 (338)
384 KOG0669 Cyclin T-dependent kin 100.0 2.4E-30 5.3E-35 258.3 2.3 224 667-916 15-249 (376)
385 KOG0664 Nemo-like MAPK-related 100.0 3.3E-30 7.1E-35 259.6 2.1 212 671-912 55-272 (449)
386 cd05576 STKc_RPK118_like Catal 100.0 4E-28 8.7E-33 258.7 16.3 181 680-900 4-184 (237)
387 KOG0670 U4/U6-associated splic 100.0 3E-29 6.5E-34 272.1 6.9 221 666-920 429-657 (752)
388 KOG1290 Serine/threonine prote 100.0 6E-28 1.3E-32 261.5 16.8 140 662-806 71-223 (590)
389 PRK09776 putative diguanylate 100.0 7.6E-28 1.7E-32 311.9 18.7 379 176-595 270-660 (1092)
390 smart00221 STYKc Protein kinas 99.9 9.8E-27 2.1E-31 244.3 22.2 216 671-915 1-219 (225)
391 KOG0665 Jun-N-terminal kinase 99.9 7.3E-28 1.6E-32 249.3 8.2 210 668-912 16-231 (369)
392 KOG3653 Transforming growth fa 99.9 6.7E-27 1.4E-31 253.1 14.4 192 667-894 208-420 (534)
393 KOG1025 Epidermal growth facto 99.9 4.9E-27 1.1E-31 266.6 12.7 221 670-919 697-923 (1177)
394 PLN03224 probable serine/threo 99.9 4.1E-26 9E-31 264.5 19.9 240 665-930 141-476 (507)
395 smart00220 S_TKc Serine/Threon 99.9 1.4E-25 3E-30 237.8 19.8 205 681-917 1-206 (244)
396 PLN03225 Serine/threonine-prot 99.9 4.3E-26 9.3E-31 270.9 16.7 200 666-898 129-379 (566)
397 KOG2052 Activin A type IB rece 99.9 4.1E-26 9E-31 245.3 14.2 198 669-900 211-438 (513)
398 PLN00113 leucine-rich repeat r 99.9 4.5E-26 9.7E-31 291.4 17.3 188 669-900 690-880 (968)
399 TIGR02040 PpsR-CrtJ transcript 99.9 1.1E-25 2.5E-30 262.4 17.5 360 195-593 2-368 (442)
400 KOG1345 Serine/threonine kinas 99.9 1.2E-26 2.7E-31 234.4 6.4 198 668-902 23-229 (378)
401 KOG1163 Casein kinase (serine/ 99.9 6.8E-26 1.5E-30 225.5 11.2 230 664-920 10-246 (341)
402 KOG0576 Mitogen-activated prot 99.9 1.1E-26 2.3E-31 259.7 5.1 220 668-919 14-236 (829)
403 KOG0200 Fibroblast/platelet-de 99.9 7.6E-25 1.6E-29 262.8 20.9 231 663-921 290-547 (609)
404 PRK13560 hypothetical protein; 99.9 1.3E-24 2.8E-29 272.8 20.0 379 176-593 54-469 (807)
405 KOG1027 Serine/threonine prote 99.9 5.4E-26 1.2E-30 260.6 6.4 226 671-931 511-747 (903)
406 KOG1165 Casein kinase (serine/ 99.9 2.2E-24 4.7E-29 223.9 15.6 226 666-918 25-259 (449)
407 KOG1167 Serine/threonine prote 99.9 2.5E-25 5.3E-30 239.1 8.8 223 668-900 35-280 (418)
408 KOG1164 Casein kinase (serine/ 99.9 6.7E-23 1.5E-27 228.6 19.8 213 670-903 19-242 (322)
409 cd00180 PKc Catalytic domain o 99.9 2.3E-22 4.9E-27 207.5 21.3 185 677-891 1-187 (215)
410 PRK09188 serine/threonine prot 99.9 4.8E-23 1E-27 229.5 15.9 175 666-872 15-194 (365)
411 KOG1024 Receptor-like protein 99.9 3.9E-22 8.4E-27 210.8 16.2 231 665-922 280-524 (563)
412 COG0515 SPS1 Serine/threonine 99.9 3.3E-20 7.2E-25 204.2 24.3 222 671-916 2-233 (384)
413 PRK11359 cyclic-di-GMP phospho 99.9 4.3E-20 9.2E-25 231.9 26.5 241 186-592 9-254 (799)
414 TIGR02938 nifL_nitrog nitrogen 99.9 2.7E-21 5.9E-26 228.1 13.8 275 188-626 3-290 (494)
415 KOG0603 Ribosomal protein S6 k 99.9 9.4E-23 2E-27 229.8 1.0 213 676-930 1-217 (612)
416 PRK10359 lipopolysaccharide co 99.8 3.7E-21 8E-26 199.7 11.8 174 667-892 29-216 (232)
417 PLN00181 protein SPA1-RELATED; 99.8 2.1E-21 4.5E-26 242.1 9.5 168 725-900 28-217 (793)
418 cd05147 RIO1_euk RIO kinase fa 99.8 1.5E-20 3.2E-25 192.8 12.8 141 674-820 2-166 (190)
419 cd05145 RIO1_like RIO kinase f 99.8 2.4E-19 5.1E-24 184.4 15.8 143 673-821 1-167 (190)
420 PRK12274 serine/threonine prot 99.8 4.7E-19 1E-23 180.0 16.1 203 671-903 4-212 (218)
421 KOG0606 Microtubule-associated 99.8 3.6E-20 7.9E-25 217.9 8.8 208 669-930 83-291 (1205)
422 KOG0590 Checkpoint kinase and 99.8 3.3E-20 7.2E-25 220.0 2.9 211 669-905 317-532 (601)
423 KOG1166 Mitotic checkpoint ser 99.8 7E-19 1.5E-23 212.0 12.0 199 664-896 693-901 (974)
424 smart00750 KIND kinase non-cat 99.8 1.7E-18 3.7E-23 175.4 11.6 119 754-913 1-120 (176)
425 PRK10345 hypothetical protein; 99.8 5.3E-18 1.2E-22 175.6 14.4 135 673-818 6-156 (210)
426 smart00090 RIO RIO-like kinase 99.7 2E-17 4.2E-22 175.6 14.3 144 670-820 29-197 (237)
427 KOG1240 Protein kinase contain 99.7 1.9E-18 4E-23 203.5 5.4 201 670-899 24-240 (1431)
428 PRK14879 serine/threonine prot 99.7 7.5E-17 1.6E-21 168.6 16.6 138 674-820 1-143 (211)
429 PF14531 Kinase-like: Kinase-l 99.7 2.4E-17 5.1E-22 176.4 11.4 201 670-901 13-253 (288)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 3.7E-16 8.1E-21 161.8 15.2 133 676-820 1-138 (199)
431 KOG0195 Integrin-linked kinase 99.7 2E-17 4.3E-22 167.6 3.9 224 666-926 187-417 (448)
432 cd05144 RIO2_C RIO kinase fami 99.7 6E-16 1.3E-20 160.2 13.3 139 670-821 16-175 (198)
433 PRK09605 bifunctional UGMP fam 99.6 1.5E-15 3.3E-20 180.9 14.3 139 669-820 333-476 (535)
434 PF13426 PAS_9: PAS domain; PD 99.6 4.1E-15 8.9E-20 135.8 14.0 104 199-305 1-104 (104)
435 PF13426 PAS_9: PAS domain; PD 99.6 5.7E-15 1.2E-19 134.9 13.0 104 482-588 1-104 (104)
436 cd05119 RIO RIO kinase family, 99.6 3.4E-15 7.4E-20 152.9 12.5 139 673-820 1-163 (187)
437 PRK09776 putative diguanylate 99.6 1.9E-15 4.1E-20 196.4 10.4 299 129-470 357-663 (1092)
438 PRK01723 3-deoxy-D-manno-octul 99.6 2E-14 4.4E-19 152.8 14.2 137 675-820 37-191 (239)
439 KOG4158 BRPK/PTEN-induced prot 99.6 2.5E-15 5.4E-20 160.0 6.9 211 666-902 154-461 (598)
440 cd05120 APH_ChoK_like Aminogly 99.5 5.4E-14 1.2E-18 137.6 13.0 132 673-820 2-138 (155)
441 KOG1033 eIF-2alpha kinase PEK/ 99.5 2.8E-15 6E-20 166.8 2.1 128 742-893 329-457 (516)
442 PF08448 PAS_4: PAS fold; Int 99.5 1.1E-13 2.3E-18 127.9 10.8 110 478-591 1-110 (110)
443 PF08448 PAS_4: PAS fold; Int 99.5 1.7E-13 3.7E-18 126.5 12.2 110 195-308 1-110 (110)
444 PF00989 PAS: PAS fold; Inter 99.5 1.7E-13 3.6E-18 127.2 12.1 112 189-303 1-113 (113)
445 KOG0606 Microtubule-associated 99.5 9.3E-15 2E-19 172.9 2.6 263 667-931 802-1069(1205)
446 PF00989 PAS: PAS fold; Inter 99.5 4.1E-13 8.8E-18 124.6 11.6 111 473-586 2-113 (113)
447 KOG0590 Checkpoint kinase and 99.4 9.8E-15 2.1E-19 173.6 -1.2 211 669-904 20-236 (601)
448 TIGR02040 PpsR-CrtJ transcript 99.4 2.2E-13 4.8E-18 159.1 8.6 258 166-466 96-369 (442)
449 PRK13557 histidine kinase; Pro 99.4 2.4E-12 5.2E-17 154.1 16.6 132 183-314 24-155 (540)
450 PRK13559 hypothetical protein; 99.4 5.8E-12 1.3E-16 143.1 18.6 129 186-314 40-168 (361)
451 PRK11091 aerobic respiration c 99.4 1.1E-12 2.3E-17 164.4 12.5 140 172-314 138-277 (779)
452 PRK11091 aerobic respiration c 99.4 2.5E-12 5.4E-17 161.1 14.6 136 455-593 137-273 (779)
453 PRK13559 hypothetical protein; 99.4 1E-11 2.2E-16 141.1 17.4 122 472-593 43-164 (361)
454 PRK13557 histidine kinase; Pro 99.4 5E-12 1.1E-16 151.4 14.6 124 472-595 30-153 (540)
455 TIGR01982 UbiB 2-polyprenylphe 99.3 2.4E-12 5.3E-17 148.6 10.8 142 674-822 122-308 (437)
456 PRK04750 ubiB putative ubiquin 99.3 6E-13 1.3E-17 155.3 4.7 147 668-822 119-315 (537)
457 KOG1023 Natriuretic peptide re 99.3 7.5E-12 1.6E-16 142.5 11.3 164 723-912 1-176 (484)
458 PRK13558 bacterio-opsin activa 99.3 4.8E-11 1E-15 146.9 16.8 127 189-315 148-274 (665)
459 cd05146 RIO3_euk RIO kinase fa 99.3 8.2E-11 1.8E-15 120.0 15.2 140 674-820 2-173 (197)
460 cd05151 ChoK Choline Kinase (C 99.2 3.1E-11 6.7E-16 121.4 11.1 127 674-819 3-135 (170)
461 PRK10060 RNase II stability mo 99.2 1.1E-10 2.4E-15 142.8 15.4 139 173-315 95-235 (663)
462 PRK11359 cyclic-di-GMP phospho 99.2 2E-10 4.3E-15 144.6 16.8 142 166-314 117-259 (799)
463 KOG1243 Protein kinase [Genera 99.2 1.7E-10 3.8E-15 132.3 13.6 184 671-894 15-199 (690)
464 KOG3087 Serine/threonine prote 99.2 2E-10 4.4E-15 112.1 11.7 146 673-820 11-165 (229)
465 PRK13558 bacterio-opsin activa 99.1 5.2E-10 1.1E-14 137.7 17.0 121 474-594 150-270 (665)
466 KOG0601 Cyclin-dependent kinas 99.1 3E-11 6.6E-16 137.6 5.5 210 666-901 111-330 (524)
467 TIGR00229 sensory_box PAS doma 99.1 5.8E-10 1.2E-14 100.4 13.0 121 188-312 2-123 (124)
468 COG3642 Mn2+-dependent serine/ 99.1 3.4E-10 7.5E-15 111.3 11.8 134 675-820 2-140 (204)
469 PRK10060 RNase II stability mo 99.1 4.8E-10 1E-14 137.3 15.5 116 474-593 113-230 (663)
470 TIGR02938 nifL_nitrog nitrogen 99.1 2.4E-10 5.2E-15 134.9 10.9 117 474-593 6-122 (494)
471 PF08447 PAS_3: PAS fold; Int 99.0 1.2E-09 2.6E-14 97.5 9.8 86 497-583 1-91 (91)
472 TIGR00229 sensory_box PAS doma 99.0 2.5E-09 5.3E-14 96.2 11.6 115 474-592 5-120 (124)
473 PF08447 PAS_3: PAS fold; Int 99.0 1.3E-09 2.8E-14 97.3 9.6 86 214-300 1-91 (91)
474 KOG0601 Cyclin-dependent kinas 99.0 1.4E-10 3E-15 132.2 3.1 199 666-897 262-465 (524)
475 cd05154 ACAD10_11_like Acyl-Co 99.0 2.9E-09 6.2E-14 111.8 12.6 140 675-820 4-206 (223)
476 COG3829 RocR Transcriptional r 98.9 2.1E-08 4.5E-13 113.4 14.5 221 192-591 4-224 (560)
477 PF01163 RIO1: RIO1 family; I 98.9 2.1E-08 4.5E-13 102.0 12.5 127 684-820 1-155 (188)
478 PRK15123 lipopolysaccharide co 98.8 4.5E-08 9.7E-13 105.5 15.4 133 685-819 38-193 (268)
479 cd00130 PAS PAS domain; PAS mo 98.8 1.2E-07 2.6E-12 80.8 14.0 103 481-586 1-103 (103)
480 cd00130 PAS PAS domain; PAS mo 98.8 1.3E-07 2.9E-12 80.5 13.5 103 198-303 1-103 (103)
481 KOG1266 Protein kinase [Signal 98.8 7.1E-09 1.5E-13 109.2 6.1 154 721-897 119-281 (458)
482 TIGR02966 phoR_proteo phosphat 98.8 3E-08 6.4E-13 110.6 11.0 114 185-314 2-115 (333)
483 PRK11073 glnL nitrogen regulat 98.7 3.4E-08 7.4E-13 111.5 10.8 111 473-593 8-118 (348)
484 PRK11073 glnL nitrogen regulat 98.7 1.1E-07 2.4E-12 107.3 14.1 117 188-314 6-122 (348)
485 PRK11360 sensory histidine kin 98.7 1.9E-07 4E-12 113.2 16.5 128 182-315 255-383 (607)
486 KOG3741 Poly(A) ribonuclease s 98.7 1.4E-07 3.1E-12 105.3 13.3 134 682-818 289-440 (655)
487 PRK11360 sensory histidine kin 98.7 1.3E-07 2.8E-12 114.6 14.3 118 473-596 263-381 (607)
488 PF13596 PAS_10: PAS domain; P 98.6 1.7E-07 3.6E-12 86.6 9.8 106 191-304 1-106 (106)
489 COG0478 RIO-like serine/threon 98.6 2.8E-07 6E-12 96.3 11.6 136 671-818 93-249 (304)
490 TIGR02966 phoR_proteo phosphat 98.6 2E-07 4.3E-12 103.9 11.0 104 473-592 7-110 (333)
491 KOG0501 K+-channel KCNQ [Inorg 98.6 4.1E-07 8.8E-12 101.3 12.4 119 474-592 16-139 (971)
492 PF06176 WaaY: Lipopolysacchar 98.6 5.6E-07 1.2E-11 92.4 11.9 141 666-819 28-182 (229)
493 COG4248 Uncharacterized protei 98.5 9.5E-07 2.1E-11 96.4 14.1 209 673-918 15-247 (637)
494 PF06293 Kdo: Lipopolysacchari 98.5 9.8E-07 2.1E-11 91.9 13.6 105 714-820 56-170 (206)
495 PRK09902 hypothetical protein; 98.5 1E-06 2.3E-11 90.2 13.3 140 678-820 27-179 (216)
496 PF12860 PAS_7: PAS fold 98.5 2.9E-07 6.2E-12 86.3 8.7 105 195-311 1-115 (115)
497 PF13596 PAS_10: PAS domain; P 98.5 3.2E-07 7E-12 84.6 8.9 106 474-587 1-106 (106)
498 PF12860 PAS_7: PAS fold 98.5 3.3E-07 7.2E-12 85.9 8.7 104 478-593 1-114 (115)
499 KOG0501 K+-channel KCNQ [Inorg 98.5 3.2E-07 7E-12 102.1 9.8 121 190-310 15-140 (971)
500 PRK11388 DNA-binding transcrip 98.5 5.2E-06 1.1E-10 101.5 21.1 107 474-591 205-311 (638)
No 1
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=413.36 Aligned_cols=235 Identities=45% Similarity=0.769 Sum_probs=215.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||+||+|+.+.+++.||+|+++|..+...........|..||..++||+||.++..|++...+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45689999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
||+||+.||.|+.+|+++ +.|++..+++|+.+|+.||.|||++|||||||||+|||++.+|+++|+|||+|+..
T Consensus 102 lVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~---- 175 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED---- 175 (357)
T ss_pred EEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc----
Confidence 999999999999999876 55999999999999999999999999999999999999999999999999999642
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+.++|||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+...
T Consensus 176 -----------------------~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 176 -----------------------LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred -----------------------ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 122335567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 906 TFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
++++|+.+....|.. ..|..++||
T Consensus 233 ~~~~I~~~k~~~~p~-~ls~~ardl 256 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPG-YLSEEARDL 256 (357)
T ss_pred HHHHHhcCcCCCCCc-cCCHHHHHH
Confidence 999999999655543 246666665
No 2
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-48 Score=394.08 Aligned_cols=232 Identities=45% Similarity=0.820 Sum_probs=217.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||.|+||.|.+|+++.+|..||+|++.+.......+.+...+|..||+.+.||+++++++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45789999999999999999999999999999999999987777788888999999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
|||||++||.|+.++++. +.|++..+++++.||+.||+|||+++|++|||||+||||+++|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999875 459999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
..+.+.||||.|+|||++..++|+.++|+|||||++|||+.|.+||.+.+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 23568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 906 TFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
++++|+++++.||+.. |.++|||.
T Consensus 249 iY~KI~~~~v~fP~~f--s~~~kdLl 272 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSYF--SSDAKDLL 272 (355)
T ss_pred HHHHHHhCcccCCccc--CHHHHHHH
Confidence 9999999999999975 77777764
No 3
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-47 Score=405.22 Aligned_cols=290 Identities=50% Similarity=0.892 Sum_probs=251.6
Q ss_pred CCCCCCCCCCchhhhHhhc-ccccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHH
Q 002342 642 HPKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER 720 (934)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~ 720 (934)
..+||......|..+..+. .....+..++|++++.||.|.-|+||+|+...++..+|+|++.|..+..+.+..+...|.
T Consensus 49 ~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~ 128 (459)
T KOG0610|consen 49 GNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTER 128 (459)
T ss_pred cCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHH
Confidence 3567777777888877666 466788899999999999999999999999999999999999999888889999999999
Q ss_pred HHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 002342 721 EILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (934)
Q Consensus 721 ~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~ 800 (934)
+||+.++||+++.||..|+.+.+.|+|||||+||+|..++++|.++.|++..+++|+.+++.||+|||-.|||+|||||+
T Consensus 129 eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPE 208 (459)
T KOG0610|consen 129 EILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPE 208 (459)
T ss_pred HHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCcEEEEecccCcccCCCCCCCCCcch-------------------h---h-hcc---ccCC--CCcccc-ccc
Q 002342 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN-------------------E---K-KRR---HKGQ--QNPVFM-AEP 851 (934)
Q Consensus 801 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~-------------------~---~-~~~---~~~~--~~~~~~-~~~ 851 (934)
||||.++|+|.|.||.++......+........ . . ++. .... ..+... ...
T Consensus 209 NILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~ 288 (459)
T KOG0610|consen 209 NILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPT 288 (459)
T ss_pred eeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCC
Confidence 999999999999999998765443332221100 0 0 000 0000 011121 233
Q ss_pred ccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 852 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 852 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
...+++++||-.|+|||++.|.+++.++|+|+|||+||||++|..||.|.+..+++.+|+.+.+.||..+..|..+|||+
T Consensus 289 ~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLI 368 (459)
T KOG0610|consen 289 GARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLI 368 (459)
T ss_pred CccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHH
Confidence 47788999999999999999999999999999999999999999999999999999999999999999988999999986
No 4
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.8e-47 Score=413.96 Aligned_cols=265 Identities=39% Similarity=0.665 Sum_probs=225.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++++.||+|+||.||+|+.+.||..||+|+++|..+....++..+..|..||...++|+||+||..|++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||||++||++..+|.+. ..|+++.+++|+.+++.|++.||+.|+|||||||+|+||+..|++||+|||+|......
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999875 56999999999999999999999999999999999999999999999999999654332
Q ss_pred CCCCCCc---chhhhc-cccCCCCc----------------ccccccccccccccCCCCccchhhhcCCCCCchhHHHHH
Q 002342 825 PQLLLPT---TNEKKR-RHKGQQNP----------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 884 (934)
Q Consensus 825 ~~~~~~~---~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSl 884 (934)
.....-. ...... .......+ .+.........+.+|||-|||||++.+.+|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 2211000 000000 00000000 011112233456799999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCCcccCCCC
Q 002342 885 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPSSCKAANVP 931 (934)
Q Consensus 885 G~iL~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l~ 931 (934)
|||+|||+.|.|||.+.+..+++++|++-. +.||.....|.+|+||+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI 423 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLI 423 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHH
Confidence 999999999999999999999999999855 89999999999999985
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-46 Score=415.41 Aligned_cols=232 Identities=31% Similarity=0.539 Sum_probs=217.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|+..+.||+|||+.||.+++..+|..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888888899999999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|+|..++|..+++++ +.++|.+++.++.||+.||.|||+++|||||||..|++++.+.+|||+|||+|.....
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~----- 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY----- 170 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC-----
Confidence 999999999999864 5699999999999999999999999999999999999999999999999999965432
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
+.....++||||.|+|||++...++++.+||||+||+||.|+.|+|||...+-.+++.
T Consensus 171 ----------------------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 171 ----------------------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred ----------------------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 2234568899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCcccCCCC
Q 002342 909 NILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 909 ~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
+|...++.+|+ .+|..|+||+
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI 249 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLI 249 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHH
Confidence 99999999999 4699998875
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-45 Score=390.74 Aligned_cols=221 Identities=29% Similarity=0.504 Sum_probs=201.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+.+.||+|+|++||+++++.++..||||.+.+..+ .+...+.+..|+.||+.++|||||.|++++..++++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999987644 566677889999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC------CcEEEEecccCccc
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 821 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~------~~vkl~DFG~a~~~ 821 (934)
||||+||+|.+|+++.+ .+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+..
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999998864 59999999999999999999999999999999999999865 35899999999764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
. +.....+.||+|.|||||++....|+.|+|+||+|++||+|++|++||...
T Consensus 166 ~----------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 Q----------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred C----------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3 234456889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCC
Q 002342 902 TRQKTFANILHKDLKFPS 919 (934)
Q Consensus 902 ~~~~~~~~i~~~~~~~p~ 919 (934)
+..+.+..+..+.-..|.
T Consensus 218 t~~eL~~~~~k~~~~~~~ 235 (429)
T KOG0595|consen 218 TPKELLLYIKKGNEIVPV 235 (429)
T ss_pred CHHHHHHHHhccccccCc
Confidence 999999999888765554
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=402.32 Aligned_cols=248 Identities=37% Similarity=0.611 Sum_probs=220.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
....+|.+.+.||+|+|++|++|+++.+++.||||++.|..+....+.+.+.+|..+|.+| +||.|++||..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3467999999999999999999999999999999999998887888888899999999999 899999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|+||+++|+|.+++++. +.|++..+++++.||+.||+|||++|||||||||+||||+.+|++||+|||.|+.+.+.
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999999886 55999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
....- .+...........+++||-.|.+||+|.....++.+|+|+|||+||+|+.|.|||.+.+..
T Consensus 228 ~~~~~--------------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney 293 (604)
T KOG0592|consen 228 QKSQE--------------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY 293 (604)
T ss_pred hcccc--------------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH
Confidence 33211 0111111112247899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 905 KTFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
.++++|+.-.+.||... +..++||+
T Consensus 294 liFqkI~~l~y~fp~~f--p~~a~dLv 318 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEGF--PEDARDLI 318 (604)
T ss_pred HHHHHHHHhcccCCCCC--CHHHHHHH
Confidence 99999999999999875 46666653
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-45 Score=390.79 Aligned_cols=234 Identities=32% Similarity=0.488 Sum_probs=204.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC----hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~----~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.+.|.+.+.||+|+||.|-+|..+.+|+.||||++++..... ........+|++||++|+|||||+++++|...++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 478999999999999999999999999999999999865433 2234456799999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecccCcc
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 820 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~---~~vkl~DFG~a~~ 820 (934)
.||||||+.||+|++.+-.+ +.+.++..+.+++||+.||.|||++||+||||||+|||++.+ -.+||+|||+|+.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999999775 569999999999999999999999999999999999999876 5789999999976
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCC---chhHHHHHHHHHHHHHhCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s---~~~DiwSlG~iL~elltG~~P 897 (934)
.+ ......++||||.|.|||++.+..+. .++|+|||||+||-+++|.+|
T Consensus 329 ~g----------------------------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 329 SG----------------------------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred cc----------------------------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 43 12234688999999999999776543 378999999999999999999
Q ss_pred CCCCCHHH-HHHHHHcCCCCC--CCCCCCCcccCCCC
Q 002342 898 FRGKTRQK-TFANILHKDLKF--PSSTPSSCKAANVP 931 (934)
Q Consensus 898 f~~~~~~~-~~~~i~~~~~~~--p~~~~~s~~~k~l~ 931 (934)
|.+..... ..++|.+|.+.| |.|..+|.+++||+
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI 417 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLI 417 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHH
Confidence 99877766 899999999866 45677888888775
No 9
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-44 Score=401.42 Aligned_cols=228 Identities=41% Similarity=0.804 Sum_probs=212.7
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~ 742 (934)
..+..++|.++++||+|+||+|+++..+.+++.||||+++|..+...+.++....|..|+.... ||+++.++.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4678899999999999999999999999999999999999999999999999999999999885 999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
++|+||||+.||++..+.+ .+.|++..+++|+..++.||.|||++||||||||.+|||++.+|++||+|||+|+..
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~- 518 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG- 518 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccccc-
Confidence 9999999999999555443 355999999999999999999999999999999999999999999999999999642
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
......++++||||.|||||++.+..|+.++|+|||||+||||+.|..||.|++
T Consensus 519 --------------------------m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 519 --------------------------MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred --------------------------CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 112346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPSST 921 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~ 921 (934)
..+++..|++.+..||.+.
T Consensus 573 Eee~FdsI~~d~~~yP~~l 591 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRFL 591 (694)
T ss_pred HHHHHHHHhcCCCCCCCcc
Confidence 9999999999999999987
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=370.53 Aligned_cols=232 Identities=28% Similarity=0.479 Sum_probs=205.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-e
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-H 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-~ 743 (934)
.+..++.+.++.||+|..|+||+|+++.+++.||+|++.- ..+....+++.+|++|++.++|||||.+|+.|..+. .
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 3556789999999999999999999999999999999953 346677789999999999999999999999999988 5
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
++|+||||++|+|.+++... +.+++..+..++.++++||.|||. .+||||||||+|||++..|.|||||||.+....
T Consensus 153 isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999999875 559999999999999999999996 899999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~- 901 (934)
. ...++++||..|||||.+.+..|+.++||||||++|+||++|+.||...
T Consensus 231 n-----------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~ 281 (364)
T KOG0581|consen 231 N-----------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN 281 (364)
T ss_pred h-----------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC
Confidence 1 1457889999999999999999999999999999999999999999885
Q ss_pred ----CHHHHHHHHHcCC-CCCCCCCCCCcccCCC
Q 002342 902 ----TRQKTFANILHKD-LKFPSSTPSSCKAANV 930 (934)
Q Consensus 902 ----~~~~~~~~i~~~~-~~~p~~~~~s~~~k~l 930 (934)
...+.+..|+.+. ..+|.. ..|.+.++|
T Consensus 282 ~~~~~~~~Ll~~Iv~~ppP~lP~~-~fS~ef~~F 314 (364)
T KOG0581|consen 282 PPYLDIFELLCAIVDEPPPRLPEG-EFSPEFRSF 314 (364)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCcc-cCCHHHHHH
Confidence 6678999999865 466664 346665554
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-44 Score=361.64 Aligned_cols=225 Identities=30% Similarity=0.518 Sum_probs=200.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeE-EEEeCCe-E
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~-~~~~~~~-~ 744 (934)
...+|+++++||+|+||.||+|.+..+|..+|.|-+.-+. .+......+..|+.+|++|+|||||++++ .|..+.. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 3568999999999999999999999999999999988553 35566678889999999999999999998 6655555 8
Q ss_pred EEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEEEecCCcEEEEecccC
Q 002342 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~--~g--iiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+||||||.+|+|..+++. +..+.+++..++.++.|+|.||..+|. .+ |+||||||.||+|+.+|.|||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999874 345789999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
+.+.... ....+++|||.||+||.+.+.+|+++||||||||++|||+.=++||
T Consensus 176 r~l~s~~---------------------------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSKT---------------------------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcchh---------------------------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 7654221 2345789999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCC-CCC
Q 002342 899 RGKTRQKTFANILHKDLK-FPS 919 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~-~p~ 919 (934)
.|.+..+.-++|.+|+++ +|.
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p~ 250 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLPD 250 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCcH
Confidence 999999999999999875 673
No 12
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=364.32 Aligned_cols=241 Identities=32% Similarity=0.529 Sum_probs=203.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC-----------hHHHHHHHHHHHHHHhCCCCCccce
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------RNKVHRACAEREILDMLDHPFVPAL 734 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~hp~Iv~l 734 (934)
..+++|++.+.||+|.||.|-+|++..+++.||||++.|..... ....+...+|+.||++|.|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34679999999999999999999999999999999998753321 1224678899999999999999999
Q ss_pred eEEEEe--CCeEEEEEEccCCCCchhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 735 YASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 735 ~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
+++..+ .+.+|||+|||..|.+...-.. +. +++.++++|+++++.||+|||.+|||||||||+|+||+++|+||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 999985 5789999999998887655332 33 99999999999999999999999999999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----CCchhHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGIL 887 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~~DiwSlG~i 887 (934)
|.|||.+........ ..........+|||.|||||++.++. -+++.||||+||+
T Consensus 251 IsDFGVs~~~~~~~~----------------------~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSD----------------------EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred eeccceeeecccCCc----------------------cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 999999965422100 00001112258999999999997732 2458999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 888 LYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 888 L~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
||+|+.|+.||.+....+++.+|++..+.||..+.++..+|||+
T Consensus 309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli 352 (576)
T KOG0585|consen 309 LYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLI 352 (576)
T ss_pred HHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHH
Confidence 99999999999999999999999999999999987888888874
No 13
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-42 Score=341.72 Aligned_cols=235 Identities=36% Similarity=0.587 Sum_probs=218.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++.+.||.|.||.||+++.++++..+|+|++.|..+......+.+.+|++|-+.|+||||+++|++|.+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 44679999999999999999999999999999999999887766677788899999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
|++||..+|+|+..++.+....+++.....+..|++.||.|+|.+++|||||||+|+|++..|.+||+|||.+..
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~----- 173 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH----- 173 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee-----
Confidence 999999999999999977778899999999999999999999999999999999999999999999999999843
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.+.....+.|||+-|++||+..+..++..+|+|++|++.||++.|.+||...+..+
T Consensus 174 ------------------------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 174 ------------------------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred ------------------------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 22445568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 906 TFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
++++|.+-++.+|+. ++..++||+
T Consensus 230 tYkrI~k~~~~~p~~--is~~a~dlI 253 (281)
T KOG0580|consen 230 TYKRIRKVDLKFPST--ISGGAADLI 253 (281)
T ss_pred HHHHHHHccccCCcc--cChhHHHHH
Confidence 999999999999965 577777764
No 14
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=369.97 Aligned_cols=223 Identities=33% Similarity=0.538 Sum_probs=204.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+++|.+...||+|+||.||+++.+.+.+.||+|++.|.. .....++.+.+|++|++.++||||+.++++|++..++|+|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 368999999999999999999999999999999998753 3455678899999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
+|||.| +|+.++... +.++++.++.++.+++.||.|||+++|+|||+||.|||+..+|.+|+||||+|+.++..
T Consensus 80 te~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--- 153 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--- 153 (808)
T ss_pred ehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC---
Confidence 999955 999999764 56999999999999999999999999999999999999999999999999999776432
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
-...+++.|||.|||||++.+..|+..+|+|||||+||||++|+|||...+..+..
T Consensus 154 ------------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv 209 (808)
T KOG0597|consen 154 ------------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLV 209 (808)
T ss_pred ------------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCC
Q 002342 908 ANILHKDLKFPSST 921 (934)
Q Consensus 908 ~~i~~~~~~~p~~~ 921 (934)
+.|+.....+|+..
T Consensus 210 ~~I~~d~v~~p~~~ 223 (808)
T KOG0597|consen 210 KSILKDPVKPPSTA 223 (808)
T ss_pred HHHhcCCCCCcccc
Confidence 99999999999854
No 15
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=373.32 Aligned_cols=235 Identities=34% Similarity=0.606 Sum_probs=208.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh--HHHHHHHHHHHHHHhCC-CCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~ 742 (934)
...+.|.+.+.||+|+||+|+++.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 346799999999999999999999999999999998776432211 34456678999999998 999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCccc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~ 821 (934)
.+|+|||||.||+|++++... +.+.+..++.++.||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 999999999999999999883 559999999999999999999999999999999999999999 99999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CC-chhHHHHHHHHHHHHHhCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s-~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
. .......+.|||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 1 1123456789999999999999977 75 69999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 900 GKTRQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
..+...++.+|.++.+.+|.+.. |+++++|
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~L 254 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSL 254 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHH
Confidence 99999999999999999999975 6666654
No 16
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=345.18 Aligned_cols=235 Identities=40% Similarity=0.760 Sum_probs=217.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+-+++|..++.||+|.||+|-+++.+.+++.||+|+++|..+..++.+.....|-++|+..+||++..|..+|+..+.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999999999999999999999988999988899999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||..||.|+-++.+. +.|+++.++++-..|+.||.|||+++||.||||.+|+|++.+|++||+|||+|+..
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--- 318 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE--- 318 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc---
Confidence 9999999999999999774 56999999999999999999999999999999999999999999999999999542
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
..-.....++||||.|+|||++....|+.++|+|.+|+++|||++|+.||...+..
T Consensus 319 ------------------------I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 319 ------------------------IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred ------------------------ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 11224567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 905 KTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
..+..|+-+++.||... |+++|.|
T Consensus 375 kLFeLIl~ed~kFPr~l--s~eAktL 398 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRTL--SPEAKTL 398 (516)
T ss_pred HHHHHHHhhhccCCccC--CHHHHHH
Confidence 99999999999999864 6666654
No 17
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.2e-41 Score=352.98 Aligned_cols=224 Identities=30% Similarity=0.578 Sum_probs=209.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
..+|++.+.||.|.||+|-+|++...|+.||||.++|+.+.+.+.+-.+.+|++||..|+||||+.+|++|++.+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||..+|.|++|+... +.+++.+++.+++||..|+.|+|+++++|||||.+|||++.++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~---- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD---- 205 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc----
Confidence 9999999999999876 4599999999999999999999999999999999999999999999999999855321
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.....+|||+|.|.+||++.+.+| .+.+|.||||++||.|++|..||.|.+...+
T Consensus 206 ------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 206 ------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred ------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 223468999999999999999988 5689999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCC
Q 002342 907 FANILHKDLKFPSST 921 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~ 921 (934)
.++|.+|.+.=|..+
T Consensus 262 vrQIs~GaYrEP~~P 276 (668)
T KOG0611|consen 262 VRQISRGAYREPETP 276 (668)
T ss_pred HHHhhcccccCCCCC
Confidence 999999999877754
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=342.15 Aligned_cols=215 Identities=27% Similarity=0.444 Sum_probs=188.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
++.|+.+.++|+|+||.||+++++.||+.||||.+... ..++...+-..+|+++|++|.|||+|.|+++|.....++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 36899999999999999999999999999999998753 33455556668999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
+|||+.. +.+-+.+.+ ..++.+.++.|+.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+....
T Consensus 80 FE~~dhT-vL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~---- 153 (396)
T KOG0593|consen 80 FEYCDHT-VLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA---- 153 (396)
T ss_pred eeecchH-HHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC----
Confidence 9999554 444555543 3499999999999999999999999999999999999999999999999999976542
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
+....+..+.|.+|.|||.+.+ ..|...+|||++||++.||++|.+.|+|.+..++
T Consensus 154 -----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ 210 (396)
T KOG0593|consen 154 -----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ 210 (396)
T ss_pred -----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence 2233455688999999999988 7899999999999999999999999999999988
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+..|..
T Consensus 211 Ly~I~k 216 (396)
T KOG0593|consen 211 LYLIRK 216 (396)
T ss_pred HHHHHH
Confidence 877754
No 19
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-41 Score=372.03 Aligned_cols=231 Identities=30% Similarity=0.539 Sum_probs=210.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+-|++.+.||.|+.|.|-+|++..||+..|||++.+...........+.+|+-||+.+.||||+.+|+++++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 46789999999999999999999999999999999887555666677899999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
+||++||.|++++.++ +.+++.++..++.||+.|+.|+|..+|+||||||+|+||+..+++||+|||+|....
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~----- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV----- 163 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-----
Confidence 9999999999999886 459999999999999999999999999999999999999999999999999995421
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s-~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
+.....+.||+|.|.|||++.|.+|. .++||||+|||||.|++|+.||.+.+...+
T Consensus 164 -----------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 164 -----------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred -----------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 23345677999999999999999884 699999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcccCCC
Q 002342 907 FANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
+.++.+|.|.+|++. |.+++||
T Consensus 221 LlKV~~G~f~MPs~I--s~eaQdL 242 (786)
T KOG0588|consen 221 LLKVQRGVFEMPSNI--SSEAQDL 242 (786)
T ss_pred HHHHHcCcccCCCcC--CHHHHHH
Confidence 999999999999865 6776665
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-40 Score=355.82 Aligned_cols=217 Identities=27% Similarity=0.427 Sum_probs=191.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~ 744 (934)
..+.|+.+.+||+|.||.||+|++..+|+.||||.+..+.. +........+||.||++|+||||++|.+...+. ..+
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 45789999999999999999999999999999999987543 345556778999999999999999999998876 789
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||+||| .-+|..++... .-.|++.+++.|++||+.||+|||.+||+|||||.+||||+.+|.+||+|||+|+.+...
T Consensus 194 YlVFeYM-dhDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 194 YLVFEYM-DHDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEEecc-cchhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999999 66788887653 346999999999999999999999999999999999999999999999999999754322
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. ....+..+-|++|.|||.|.| ..|+.++|+||+||||.||+.|++.|.|.+.
T Consensus 272 ~--------------------------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 272 G--------------------------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred C--------------------------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 1 122345578999999999988 4789999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+++.+|.+
T Consensus 326 veQl~kIfk 334 (560)
T KOG0600|consen 326 VEQLHKIFK 334 (560)
T ss_pred HHHHHHHHH
Confidence 999999965
No 21
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-41 Score=331.92 Aligned_cols=235 Identities=29% Similarity=0.461 Sum_probs=209.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..+.|.+...||+|.|+.||.+.+..+|+.||+|++....+... ..+.+.+|+.|-+.|+||||++|++.+......|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 345789999999999999999999999999999999886544333 5678999999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccCcccC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTS 822 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a~~~~ 822 (934)
||+|+|.|++|..-+-.+ ..+++..+-.+++||+.+|.|+|.+||||||+||+|+|+-+ .--+||+|||+|...+
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999998766544 45899999999999999999999999999999999999954 3359999999996543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.......++|||.|||||++...+|+..+|||+.|++||-|+.|.+||++.+
T Consensus 165 ----------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 ----------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred ----------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1123446789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCC--CCCCCcccCCCC
Q 002342 903 RQKTFANILHKDLKFPS--STPSSCKAANVP 931 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~--~~~~s~~~k~l~ 931 (934)
...++++|..|.+.+|+ |..++.++|||+
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLI 247 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHH
Confidence 99999999999998886 678999999874
No 22
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-38 Score=360.91 Aligned_cols=261 Identities=36% Similarity=0.633 Sum_probs=207.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..++||||+++++++.+...+||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998754444455667888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+||+|.+++... +.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999765 459999999999999999999999999999999999999999999999999986543211000
Q ss_pred CCcc-hhhhccccC--CCC-----cccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 829 LPTT-NEKKRRHKG--QQN-----PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 829 ~~~~-~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... ......... ... ..............+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000 000000000 000 00000011122456899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc--CCCCCCCCCCCCcccCCCC
Q 002342 901 KTRQKTFANILH--KDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 901 ~~~~~~~~~i~~--~~~~~p~~~~~s~~~k~l~ 931 (934)
.+..+.+.+|.. ..+.+|...+.|..+++|.
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li 271 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLI 271 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHH
Confidence 999999999986 4567887767777777653
No 23
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=384.55 Aligned_cols=239 Identities=36% Similarity=0.641 Sum_probs=217.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|.+++.||+|+||.|.+|+++.+++.||+|+++|-.+..+.....|..|..||...+++-|+.++..|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 46678999999999999999999999999999999999987666677778899999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||||||+||+|..++.+.. .+++..+++|+..|+.||..||+.|+|||||||+||||+..|++||+|||.|-.+..+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999997753 6999999999999999999999999999999999999999999999999999655322
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
....+...+|||-|++||++.. +.|+..+|+||+||++|||++|..||+
T Consensus 229 --------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 --------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred --------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 1234556799999999999943 568889999999999999999999999
Q ss_pred CCCHHHHHHHHHcC--CCCCCCCCCCCcccCCCC
Q 002342 900 GKTRQKTFANILHK--DLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 900 ~~~~~~~~~~i~~~--~~~~p~~~~~s~~~k~l~ 931 (934)
..+..++|-+|.+- .+.||....+|..+|||+
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI 316 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLI 316 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHH
Confidence 99999999999875 689997778999999885
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-38 Score=337.16 Aligned_cols=233 Identities=25% Similarity=0.395 Sum_probs=207.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..+.++.+.|++...||.|..++||+|+...++..||||++.-.. .....+.+.+|+..|+.++||||++++.+|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk--c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK--CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh--hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 345577899999999999999999999999999999999998653 344578899999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|+||.||.+|++.++++......+++..+..|+++++.||.|||++|.||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999998765566999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc--CCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.... .......++++||++|||||++. ..+|++|+||||||++..||++|..||.
T Consensus 177 ~~~G-----------------------~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 177 FDSG-----------------------DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccC-----------------------ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 4311 00011126889999999999974 3688999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCC
Q 002342 900 GKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~p~ 919 (934)
...+.+++.+-+++.++.|.
T Consensus 234 k~pPmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQNDPPTLL 253 (516)
T ss_pred cCChHHHHHHHhcCCCCCcc
Confidence 99999999999999988776
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=347.57 Aligned_cols=223 Identities=26% Similarity=0.432 Sum_probs=194.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCC-e
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 743 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~-~ 743 (934)
..+++|+++++||.|+||.||+|..+.++..||||.+++... ..+.. .-.+|++.|++|+ ||||++|.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 346899999999999999999999999999999999987533 22221 2357999999998 999999999999887 9
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||||| ..+|+++++.+ .+.|++..++.|+.||+.||+|+|++|+.|||+||+|||+.....|||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 89999999887 78899999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.+ ..+..+.|.+|.|||+|. .+.|+.++|+|++||+++|+.+=++.|+|.+
T Consensus 163 kp----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 KP----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CC----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 21 123557899999999985 5678999999999999999999999999999
Q ss_pred HHHHHHHHHc--CCCCCCCC
Q 002342 903 RQKTFANILH--KDLKFPSS 920 (934)
Q Consensus 903 ~~~~~~~i~~--~~~~~p~~ 920 (934)
..+++.+|++ |.....+|
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred HHHHHHHHHHHhCCCccccc
Confidence 9999999976 55444333
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.6e-38 Score=315.36 Aligned_cols=214 Identities=26% Similarity=0.452 Sum_probs=190.5
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|...+.||+|.||.||+|++..+|+.||||.++.....+ .......+|++.|+.++|+||+.++++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 57999999999999999999999999999999998764322 22345778999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||| ..+|...++.. ...++...++.|+.++++||+|||++.|+||||||.|+||+.+|.+||+|||+|+.+...+
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~--- 155 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN--- 155 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC---
Confidence 999 78999998765 4679999999999999999999999999999999999999999999999999997764322
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
......+-|.+|.|||.+.|. .|+..+|+||.||++.||+.|.|.|.|.+..+++
T Consensus 156 ------------------------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 156 ------------------------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred ------------------------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 222333789999999999874 6889999999999999999999999999999999
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..|.+
T Consensus 212 ~~If~ 216 (318)
T KOG0659|consen 212 SKIFR 216 (318)
T ss_pred HHHHH
Confidence 99876
No 27
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-39 Score=323.45 Aligned_cols=234 Identities=29% Similarity=0.502 Sum_probs=206.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc-----cChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~-----~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~ 741 (934)
...|.-.+.||.|..+.|-.+.++.++..+|+|++..... ......+...+|+.||+++ .||||+++.++|+++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 5678899999999999999999999999999999864221 1223455667899999998 799999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+++|+|.|+.|.|++++... -.+++...+.|++|++.|+.|||.++||||||||+|||++++.++||+|||+|+..
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999764 56999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC------CCCCchhHHHHHHHHHHHHHhCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~s~~~DiwSlG~iL~elltG~ 895 (934)
. +.......||||+|+|||.+.. .+|+..+|+|++|+++|.|+.|.
T Consensus 174 ~----------------------------~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 E----------------------------PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred C----------------------------CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 2 2334456799999999999954 47888999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCC--CCCCCcccCCCC
Q 002342 896 TPFRGKTRQKTFANILHKDLKFPS--STPSSCKAANVP 931 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~s~~~k~l~ 931 (934)
+||+.....-++++|.+|+++|.+ |..+|..+|||+
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLI 263 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLI 263 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHH
Confidence 999999999999999999988754 678999999986
No 28
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.4e-38 Score=351.72 Aligned_cols=231 Identities=40% Similarity=0.757 Sum_probs=204.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++++..++.+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 34679999999999999999999999999999999998654434445667889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999764 4589999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 222 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH
Confidence 1123579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 906 TFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.+..+..+.+.+|.+. +..+++|
T Consensus 223 ~~~~i~~~~~~~p~~~--~~~~~~l 245 (329)
T PTZ00263 223 IYEKILAGRLKFPNWF--DGRARDL 245 (329)
T ss_pred HHHHHhcCCcCCCCCC--CHHHHHH
Confidence 9999999998888764 4444443
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=327.36 Aligned_cols=216 Identities=23% Similarity=0.355 Sum_probs=189.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE--eCCeE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~ 744 (934)
..+.|+.+.+|++|+||.||+|+++.++..||+|.++-... ....--...+|+.+|.+++|||||.+-++.. +-+.+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke-k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE-KEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc-cCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 45789999999999999999999999999999999875431 2222234578999999999999999999886 34679
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||||| .-+|..++...+ ..|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++.
T Consensus 153 y~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs- 229 (419)
T KOG0663|consen 153 YIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS- 229 (419)
T ss_pred eeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC-
Confidence 9999999 668999988764 5699999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
+....+..+-|++|.|||.+.+. .|+.++|+||+|||+.||++++|.|.|.+.
T Consensus 230 --------------------------p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE 283 (419)
T KOG0663|consen 230 --------------------------PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE 283 (419)
T ss_pred --------------------------CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence 23344567889999999999875 688999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+++.+|.+
T Consensus 284 ~dQl~~If~ 292 (419)
T KOG0663|consen 284 IDQLDKIFK 292 (419)
T ss_pred HHHHHHHHH
Confidence 999999965
No 30
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=350.10 Aligned_cols=230 Identities=27% Similarity=0.435 Sum_probs=205.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
...|....+||+|+.|.||.++...+++.||+|.+.... ....+.+.+|+.+|+.++|+|||.+++.|-..+.+|.|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 357999999999999999999999999999999998653 34456688999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||+||+|.+.+.. ..+++.++..|++++|.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+...
T Consensus 349 MEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~--- 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE--- 422 (550)
T ss_pred EeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc---
Confidence 999999999999876 34999999999999999999999999999999999999999999999999999654321
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.....+.+|||.|||||++....|++++||||||++++||+-|+|||...+....+
T Consensus 423 ------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl 478 (550)
T KOG0578|consen 423 ------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 478 (550)
T ss_pred ------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence 12445779999999999999999999999999999999999999999988888888
Q ss_pred HHHH-cCCCCCCCCCCCCcccCCC
Q 002342 908 ANIL-HKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 908 ~~i~-~~~~~~p~~~~~s~~~k~l 930 (934)
..|. +|...+......|...|||
T Consensus 479 yLIa~ng~P~lk~~~klS~~~kdF 502 (550)
T KOG0578|consen 479 YLIATNGTPKLKNPEKLSPELKDF 502 (550)
T ss_pred HHHhhcCCCCcCCccccCHHHHHH
Confidence 8885 6778888777788887775
No 31
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=345.51 Aligned_cols=226 Identities=28% Similarity=0.473 Sum_probs=192.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeE-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~-vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
+.++.....+...||.|+||+||++.+. |.. +|+|++......... ...+.+|+.+|.+++|||||+|++++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4455667778888999999999999984 445 999999876544444 778999999999999999999999999877
Q ss_pred -eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEEecCC-cEEEEecccCc
Q 002342 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSC 819 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g-iiHrDLKp~NILl~~~~-~vkl~DFG~a~ 819 (934)
..+|||||+++|+|..++.....+.++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 7999999999999999998744567999999999999999999999999 99999999999999997 99999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc--CCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
...... ...+...||+.|||||++. ...|+.++||||||++||||+||+.|
T Consensus 193 ~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 532110 1223367999999999999 67999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCC--CCCC
Q 002342 898 FRGKTRQKTFANILHKDL--KFPS 919 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~--~~p~ 919 (934)
|.+....++...+..+.. .+|.
T Consensus 246 f~~~~~~~~~~~v~~~~~Rp~~p~ 269 (362)
T KOG0192|consen 246 FEDLAPVQVASAVVVGGLRPPIPK 269 (362)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCc
Confidence 999998777777765443 4444
No 32
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-37 Score=355.21 Aligned_cols=260 Identities=36% Similarity=0.579 Sum_probs=204.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987544455566778899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999998764 4589999999999999999999999999999999999999999999999999854321110000
Q ss_pred Ccchhhhcc----------ccCC----------CCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 830 PTTNEKKRR----------HKGQ----------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 830 ~~~~~~~~~----------~~~~----------~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
......... .... ..............+.+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 000000000 0000 00000000111234568999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCCcccCCCC
Q 002342 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~k~l~ 931 (934)
+|++|.+||.+.+..+....+.. ..+.+|.....+.++++|.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli 283 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLI 283 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHH
Confidence 99999999999888777777764 4566776666676666653
No 33
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-37 Score=342.77 Aligned_cols=228 Identities=39% Similarity=0.717 Sum_probs=200.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999987643333445567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.++
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123479999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCcccCCC
Q 002342 909 NILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 909 ~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.+..+...+|... +..+++|
T Consensus 209 ~i~~~~~~~~~~~--~~~~~~l 228 (291)
T cd05612 209 KILAGKLEFPRHL--DLYAKDL 228 (291)
T ss_pred HHHhCCcCCCccC--CHHHHHH
Confidence 9999998888754 4444443
No 34
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-37 Score=355.16 Aligned_cols=259 Identities=36% Similarity=0.600 Sum_probs=203.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999999999999999986544445556778899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
||++|+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999998764 4589999999999999999999999999999999999999999999999999854321111000
Q ss_pred Ccchhhhcc------cc----CC----------CCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 830 PTTNEKKRR------HK----GQ----------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 830 ~~~~~~~~~------~~----~~----------~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
......... .. .. ..............+.+||+.|+|||++.+..++.++|||||||+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 000000000 00 00 00000000111234568999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCCCcccCCC
Q 002342 890 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPSSCKAANV 930 (934)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~s~~~k~l 930 (934)
+|++|++||.+.+..+....+... .+.+|.....+.++++|
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l 282 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDL 282 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHH
Confidence 999999999998888888777763 45666655566666654
No 35
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.5e-37 Score=353.17 Aligned_cols=260 Identities=36% Similarity=0.650 Sum_probs=204.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||.|+||.||++++..+++.||||++.+...........+.+|+.+|+.++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998654444455667888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999998764 359999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcchhhhccc-----------cCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 829 LPTTNEKKRRH-----------KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 829 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
........... .......+.........+.+||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 00000000000 0000000000001122345899999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 898 FRGKTRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
|.+.+..+.+..+.... +.+|.....+..+++|
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 273 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDL 273 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHH
Confidence 99999988888887643 5566655556666554
No 36
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.6e-38 Score=356.48 Aligned_cols=260 Identities=35% Similarity=0.632 Sum_probs=202.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||++.+..+++.||||++.+...........+.+|+++++.++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999987654334455677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+|++|.+++... +.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999998764 459999999999999999999999999999999999999999999999999986432111000
Q ss_pred C-----Ccchhhhc---cccCCCCc------------ccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 829 L-----PTTNEKKR---RHKGQQNP------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 829 ~-----~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
. ........ ........ .............+||+.|+|||++.+..++.++|||||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00000000 00000000 0000000111246799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCCcccCCC
Q 002342 889 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 889 ~elltG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~k~l 930 (934)
|+|++|.+||.+.+..+.+..|.. ..+.+|.....+..+++|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dl 282 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDL 282 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHH
Confidence 999999999999888888888875 446667654455555544
No 37
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=348.01 Aligned_cols=234 Identities=32% Similarity=0.523 Sum_probs=211.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 745 (934)
....|++.+.||.|.||.||++.++.+|+.||+|++.+...........+.+|+.||+++. |||||.+++.|++.+.++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3568999999999999999999999999999999999876655556678999999999998 999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEEecccCccc
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLT 821 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~----~~vkl~DFG~a~~~ 821 (934)
+|||+|.||.|++.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+... +.+|++|||++...
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999999999876 39999999999999999999999999999999999999643 47999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. .......+||+.|+|||++....|+..+||||+|+++|.|+.|.+||.+.
T Consensus 190 ~~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 190 KP----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred cC----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 21 23456779999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCC--CCCCCcccCCCC
Q 002342 902 TRQKTFANILHKDLKFPS--STPSSCKAANVP 931 (934)
Q Consensus 902 ~~~~~~~~i~~~~~~~p~--~~~~s~~~k~l~ 931 (934)
+....+.+|..+++.|+. |..+|..+|||+
T Consensus 242 ~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i 273 (382)
T KOG0032|consen 242 TEFEIFLAILRGDFDFTSEPWDDISESAKDFI 273 (382)
T ss_pred ChhHHHHHHHcCCCCCCCCCccccCHHHHHHH
Confidence 999999999999987764 577888888874
No 38
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=348.30 Aligned_cols=225 Identities=37% Similarity=0.720 Sum_probs=199.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++.+.||.|+||.||+|.+..++ ..||+|.+.+...........+.+|+.+++.++||||+++++++.+++.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 356779999999999999999999987665 7899999976544444556678899999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||||+.+|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999765 4599999999999999999999999999999999999999999999999999854310
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.....+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 11245799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 002342 904 QKTFANILHKDLKFPSST 921 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~ 921 (934)
..+++.+..+...+|...
T Consensus 234 ~~~~~~i~~~~~~~p~~~ 251 (340)
T PTZ00426 234 LLIYQKILEGIIYFPKFL 251 (340)
T ss_pred HHHHHHHhcCCCCCCCCC
Confidence 999999999988888653
No 39
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-37 Score=352.09 Aligned_cols=261 Identities=36% Similarity=0.645 Sum_probs=206.6
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..++||||++++++|.+.+++|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654444455677888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+|++|.+++... ..+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999998764 459999999999999999999999999999999999999999999999999986432211000
Q ss_pred C-Cc---c--hhhhccccCCC--CcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 829 L-PT---T--NEKKRRHKGQQ--NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 829 ~-~~---~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
. .. . ........... ...............+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 0 00 0 00000000000 000000011123356899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc--CCCCCCCCCCCCcccCCCC
Q 002342 901 KTRQKTFANILH--KDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 901 ~~~~~~~~~i~~--~~~~~p~~~~~s~~~k~l~ 931 (934)
.+....+.++.. ..+.+|...+.+.++++|+
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li 271 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLI 271 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHH
Confidence 999999888876 3467777666777777653
No 40
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.9e-37 Score=352.41 Aligned_cols=260 Identities=36% Similarity=0.599 Sum_probs=200.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.|..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999987643333445567788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985432110000
Q ss_pred CCcchhhhcc---cc-------------CCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 829 LPTTNEKKRR---HK-------------GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 829 ~~~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
.......... .. ..................+||+.|||||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 0000000000 00 0000000000112233568999999999999999999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 893 YGYTPFRGKTRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
+|++||.+.+..+....+.... +.+|.....+..+++|
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 278 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDL 278 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHH
Confidence 9999999998888777776543 4455544455554443
No 41
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=336.53 Aligned_cols=234 Identities=32% Similarity=0.478 Sum_probs=192.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC--eEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~ 745 (934)
...|...+.||+|+||.||++.+..+|..+|+|.+... +....+.+.+|+.+|++++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 34688999999999999999999999999999998754 2222677899999999999999999999755444 689
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~~ 824 (934)
++|||+++|+|.+++.+.++ .+++..++.+.+||+.||.|||++|||||||||+|||++. ++.+||+|||++......
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 99999999999999998765 6999999999999999999999999999999999999999 799999999998654310
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCC-CC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~-~~ 902 (934)
.........+.||+.|||||++..+ ...+++|||||||++.||+||++||.. ..
T Consensus 172 ------------------------~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~ 227 (313)
T KOG0198|consen 172 ------------------------GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE 227 (313)
T ss_pred ------------------------cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc
Confidence 0111233467899999999999853 334599999999999999999999987 44
Q ss_pred HHHHHHHHHcCC--CCCCCCCCCCcccCCCC
Q 002342 903 RQKTFANILHKD--LKFPSSTPSSCKAANVP 931 (934)
Q Consensus 903 ~~~~~~~i~~~~--~~~p~~~~~s~~~k~l~ 931 (934)
....+-.|.... ..+|.+ +|++++||.
T Consensus 228 ~~~~~~~ig~~~~~P~ip~~--ls~~a~~Fl 256 (313)
T KOG0198|consen 228 EAEALLLIGREDSLPEIPDS--LSDEAKDFL 256 (313)
T ss_pred hHHHHHHHhccCCCCCCCcc--cCHHHHHHH
Confidence 455455555444 345554 688887763
No 42
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.1e-37 Score=352.26 Aligned_cols=236 Identities=34% Similarity=0.644 Sum_probs=201.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++++|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999997644334444566788999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+|||||++|+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999998653 48999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.....+.+||+.|||||++.+.. ++.++|+|||||+||+|++|++||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123567999999999997643 778999999999999999999999999
Q ss_pred CHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 902 TRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 902 ~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
+....+.+|.... +.+|.....+..+++|
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l 281 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKHAKNL 281 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHHHHHH
Confidence 9988999888744 6677665566666654
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.8e-37 Score=343.96 Aligned_cols=217 Identities=42% Similarity=0.793 Sum_probs=192.5
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998754444555667788999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~----------- 147 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS----------- 147 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-----------
Confidence 999998764 4599999999999999999999999999999999999999999999999999853210
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+..+.
T Consensus 148 ----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 148 ----------------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred ----------------CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 0111234579999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCC
Q 002342 915 LKFPSS 920 (934)
Q Consensus 915 ~~~p~~ 920 (934)
..+|..
T Consensus 212 ~~~p~~ 217 (323)
T cd05571 212 IRFPRT 217 (323)
T ss_pred CCCCCC
Confidence 888864
No 44
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.1e-37 Score=350.08 Aligned_cols=237 Identities=35% Similarity=0.647 Sum_probs=201.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++++
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45568999999999999999999999999999999999764333444455678899999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+|++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998653 4899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
........+||+.|||||++.+.. ++.++|||||||+||+|++|.+||.+
T Consensus 196 --------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 --------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred --------------------------CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 011223567999999999997643 77899999999999999999999999
Q ss_pred CCHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 901 KTRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
.+....+.+|.... +.+|.....+..+++|
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 281 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 281 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHH
Confidence 99999999998754 5677655566666554
No 45
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.1e-37 Score=349.32 Aligned_cols=237 Identities=35% Similarity=0.612 Sum_probs=202.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35567999999999999999999999999999999999764433444555677899999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC----CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
........+||+.|||||++.+. .++.++|||||||+||+|++|++||.+
T Consensus 196 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 --------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred --------------------------CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 00112345799999999999754 378899999999999999999999999
Q ss_pred CCHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 901 KTRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
.+....+..|..+. +.+|.....|..+++|
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 281 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDL 281 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHH
Confidence 99999999998754 6677765566666654
No 46
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.8e-37 Score=347.21 Aligned_cols=209 Identities=30% Similarity=0.509 Sum_probs=190.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-C-----CCccceeEEEEeCC
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKT 742 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----p~Iv~l~~~~~~~~ 742 (934)
.+|.+++.||+|+||+|.+|.+.+|++.||||+++.. +........|+.||..|+ | -|||+++++|...+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 3899999999999999999999999999999999753 566677788999999997 4 38999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--cEEEEecccCcc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCL 820 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~--~vkl~DFG~a~~ 820 (934)
++|||+|.+ ..+|+++++.+....|+...++.++.||+.||.+||+.||||+||||+||||.+-+ .|||+|||+|+.
T Consensus 262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999999999 99999999998888899999999999999999999999999999999999997644 699999999965
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ..-+.+-+..|.|||++.|.+|+.+.||||||||+.||++|.|.|.|
T Consensus 341 ~~q------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 341 ESQ------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cCC------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 321 11155788899999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+++..|.+
T Consensus 391 ~ne~DQl~~I~e 402 (586)
T KOG0667|consen 391 DNEYDQLARIIE 402 (586)
T ss_pred CCHHHHHHHHHH
Confidence 999999999976
No 47
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-36 Score=337.89 Aligned_cols=215 Identities=41% Similarity=0.740 Sum_probs=191.5
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||+|+||.||++.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999865444455667788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~------------- 145 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK------------- 145 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCcc-------------
Confidence 9999764 4599999999999999999999999999999999999999999999999999853210
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.++.+..+.+.
T Consensus 146 --------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 146 --------------DDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred --------------CCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 011223457999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCC
Q 002342 917 FPSS 920 (934)
Q Consensus 917 ~p~~ 920 (934)
+|..
T Consensus 212 ~~~~ 215 (312)
T cd05585 212 FPDG 215 (312)
T ss_pred CCCc
Confidence 8764
No 48
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=329.25 Aligned_cols=228 Identities=36% Similarity=0.684 Sum_probs=210.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.+...+|.++.+||.|+||+|.++..+.+...||||+++|+.+.+.+.++....|.++|... +-|++++++..|++-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 45678999999999999999999999999999999999999988888888889999999887 46799999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||||+.||+|.-+++.- +.|.+..+.+|+.+|+-||-|||++|||+||||.+|||++.+|++||+|||+|+.-.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni- 501 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI- 501 (683)
T ss_pred eeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc-
Confidence 99999999999999998764 459999999999999999999999999999999999999999999999999995421
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
-....+.++||||.|+|||++.-.+|+.++|+||+|++||||+.|++||.|.+.
T Consensus 502 --------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 502 --------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred --------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 112345689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 002342 904 QKTFANILHKDLKFPSST 921 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~ 921 (934)
.++++.|.+.+..||...
T Consensus 556 ~elF~aI~ehnvsyPKsl 573 (683)
T KOG0696|consen 556 DELFQAIMEHNVSYPKSL 573 (683)
T ss_pred HHHHHHHHHccCcCcccc
Confidence 999999999999999875
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.8e-36 Score=338.48 Aligned_cols=217 Identities=41% Similarity=0.801 Sum_probs=191.5
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||+|+||.||++++..+|+.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998754444555667788999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999888764 45999999999999999999999999999999999999999999999999998432100
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+..+.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011224579999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCCC
Q 002342 915 LKFPSS 920 (934)
Q Consensus 915 ~~~p~~ 920 (934)
..+|..
T Consensus 212 ~~~p~~ 217 (323)
T cd05595 212 IRFPRT 217 (323)
T ss_pred CCCCCC
Confidence 888764
No 50
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=342.28 Aligned_cols=224 Identities=26% Similarity=0.480 Sum_probs=202.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe-EEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~-~~l 746 (934)
++.|.+++.+|.|+||.+++++++.+++.|++|.+.-.....+ ..+...+|+.+++++.|||||.++++|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 5789999999999999999999999999999999876544333 33477889999999999999999999998887 999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||+||+||+|.+.+.++.+..|++..+..|+.||+.||.|||+++|+|||||+.||+++.++.|||+|||+|+.+....
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999999888899999999999999999999999999999999999999999999999999998765322
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
....+.+||+.||+||.+.+.+|+.++|||||||++|||++=+++|.+.+....
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 134577999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC-CCCCC
Q 002342 907 FANILHKD-LKFPS 919 (934)
Q Consensus 907 ~~~i~~~~-~~~p~ 919 (934)
..+|.++. .+.|.
T Consensus 215 i~ki~~~~~~Plp~ 228 (426)
T KOG0589|consen 215 ILKINRGLYSPLPS 228 (426)
T ss_pred HHHHhhccCCCCCc
Confidence 99999887 34443
No 51
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-36 Score=339.48 Aligned_cols=217 Identities=44% Similarity=0.810 Sum_probs=192.2
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765445556677889999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999888664 45999999999999999999999999999999999999999999999999998532100
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+..+.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011234579999999999999999999999999999999999999999999888998998888
Q ss_pred CCCCCC
Q 002342 915 LKFPSS 920 (934)
Q Consensus 915 ~~~p~~ 920 (934)
+.+|..
T Consensus 212 ~~~p~~ 217 (328)
T cd05593 212 IKFPRT 217 (328)
T ss_pred ccCCCC
Confidence 888764
No 52
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.3e-36 Score=320.21 Aligned_cols=216 Identities=27% Similarity=0.450 Sum_probs=188.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-ccceeEEEEeCC----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-Iv~l~~~~~~~~---- 742 (934)
...|..+++||+|+||+||+|+.+.+|+.||+|.+.-.... ...-....+|+.+|+.|+|+| |+.|++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45799999999999999999999999999999998764321 123345678999999999999 999999999877
Q ss_pred --eEEEEEEccCCCCchhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 743 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
.+++||||+ ..+|..++..... ..++...++.++.||+.||+|||++||+||||||.||||+.+|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987542 35788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+.... +....+..++|.+|.|||++.+. .|+..+||||+||+++||+++++.
T Consensus 168 ra~~i---------------------------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFSI---------------------------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhcC---------------------------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 64321 22234566899999999999987 789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002342 898 FRGKTRQKTFANILH 912 (934)
Q Consensus 898 f~~~~~~~~~~~i~~ 912 (934)
|.|.+..+++.+|.+
T Consensus 221 FpG~se~~ql~~If~ 235 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFR 235 (323)
T ss_pred CCCCcHHHHHHHHHH
Confidence 999999999888864
No 53
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-36 Score=340.03 Aligned_cols=213 Identities=39% Similarity=0.681 Sum_probs=191.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..++||||+++++++...+++||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998754444455667889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999853210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999999888888
Q ss_pred HHHcC
Q 002342 909 NILHK 913 (934)
Q Consensus 909 ~i~~~ 913 (934)
.+...
T Consensus 209 ~i~~~ 213 (333)
T cd05600 209 NLKYW 213 (333)
T ss_pred HHHhc
Confidence 77653
No 54
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.1e-36 Score=336.85 Aligned_cols=222 Identities=37% Similarity=0.713 Sum_probs=194.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC-CccceeEEEEeCCeEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~Iv~l~~~~~~~~~~~lV~ 748 (934)
+|++++.||+|+||.||+|.+..+++.||||++.+...........+..|..++..++|+ +|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999876444445566788899999999765 6888999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~----- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF----- 153 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC-----
Confidence 999999999998764 4589999999999999999999999999999999999999999999999999843110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+.
T Consensus 154 ----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 154 ----------------------GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred ----------------------CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0011234579999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCC
Q 002342 909 NILHKDLKFPSS 920 (934)
Q Consensus 909 ~i~~~~~~~p~~ 920 (934)
.+......+|..
T Consensus 212 ~i~~~~~~~~~~ 223 (324)
T cd05587 212 SIMEHNVSYPKS 223 (324)
T ss_pred HHHcCCCCCCCC
Confidence 999888888764
No 55
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.7e-36 Score=337.11 Aligned_cols=223 Identities=37% Similarity=0.704 Sum_probs=195.4
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+|.+.+.||+|+||.||++++..+++.||+|++.+..............|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999875444444556677788888877 5899999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++|+|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+...+++
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCC
Q 002342 909 NILHKDLKFPSST 921 (934)
Q Consensus 909 ~i~~~~~~~p~~~ 921 (934)
.|..+...+|...
T Consensus 212 ~i~~~~~~~p~~~ 224 (323)
T cd05616 212 SIMEHNVAYPKSM 224 (323)
T ss_pred HHHhCCCCCCCcC
Confidence 9999888888643
No 56
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-37 Score=340.23 Aligned_cols=264 Identities=36% Similarity=0.592 Sum_probs=216.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.++..-|..++.||-|+||.|.+|+...|...||+|.+.|.....+..+.....|..||...+++-||+||.+|++.+++
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 45667899999999999999999999999999999999988777888888899999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||+|++||++..+|-+. +.|.++.+++|+.++.+|+++.|..|+|||||||+||||+.+|+|||+|||+|.-+...
T Consensus 705 YFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999999999875 56999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCCCcchhhhc----------cccCCCCcccc-----cccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 825 PQLLLPTTNEKKR----------RHKGQQNPVFM-----AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 825 ~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
.....-......+ .+.+.+..... ....-...+.+||+.|+|||++...+|+-.+|+||.||+||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 2211111111000 00000000000 00112234668999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCCcccCCC
Q 002342 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~k~l 930 (934)
||+.|++||.+.+..++-.+|++ ..+.||.....|.++.+|
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~l 905 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDL 905 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHH
Confidence 99999999999999888777764 556788777677766554
No 57
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5e-36 Score=328.81 Aligned_cols=222 Identities=32% Similarity=0.580 Sum_probs=186.7
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++...+..|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 37889999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
||++++|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998876544456999999999999999999999999999999999999999999999999998542110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH----H
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----K 905 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~----~ 905 (934)
.......||+.|||||++.+..++.++|||||||++|+|++|++||.+.... .
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 0112346999999999999999999999999999999999999999876543 2
Q ss_pred HHHHHHcCCCCCCC
Q 002342 906 TFANILHKDLKFPS 919 (934)
Q Consensus 906 ~~~~i~~~~~~~p~ 919 (934)
+...+......+|.
T Consensus 213 ~~~~~~~~~~~~~~ 226 (285)
T cd05631 213 VDRRVKEDQEEYSE 226 (285)
T ss_pred HHHHhhcccccCCc
Confidence 33344444444443
No 58
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-37 Score=329.78 Aligned_cols=230 Identities=31% Similarity=0.506 Sum_probs=206.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+-|.+.+.||+|-|..|-+|++.-+|..||||++.|..+.+... ..+++|+..|+.++|||||+||++...+..+|||+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st-~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLST-GHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhh-hHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 46999999999999999999999999999999999876644444 56888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl-~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|+-++|+|++|+-+.. ..++++.+++|+.||+.|+.|+|+..+|||||||+||++ ..-|-|||+|||++..
T Consensus 97 ELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNk------- 168 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNK------- 168 (864)
T ss_pred EecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeecccccc-------
Confidence 9999999999998764 449999999999999999999999999999999999877 4568999999999843
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~-~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
..+....+++||++.|-|||++.+..|+. ++||||||||||-|++|++||...+..+.
T Consensus 169 ---------------------f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 169 ---------------------FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred ---------------------CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 23455677899999999999999999874 89999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcccCCC
Q 002342 907 FANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
+-+|+..++.+|+.. |.+-+||
T Consensus 228 LTmImDCKYtvPshv--S~eCrdL 249 (864)
T KOG4717|consen 228 LTMIMDCKYTVPSHV--SKECRDL 249 (864)
T ss_pred hhhhhcccccCchhh--hHHHHHH
Confidence 999999999999976 4444444
No 59
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=334.92 Aligned_cols=230 Identities=25% Similarity=0.398 Sum_probs=197.2
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
...+.+....+++++.||+|.||.||++.+.. ...||+|.++...+ ....+.+|++||++|+|++||+|++++..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence 34566777889999999999999999999933 33799999887533 23567799999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
+..+|||||||+.|+|.++|+...+..+.......++.|||+||+||+++++|||||...|||++.+..|||+|||+|+.
T Consensus 273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence 88999999999999999999986667899999999999999999999999999999999999999999999999999974
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
...+. +... ....-...|.|||++....++.+||||||||+||||+| |+.||.
T Consensus 353 ~~d~~----------Y~~~----------------~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 353 IGDDE----------YTAS----------------EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred cCCCc----------eeec----------------CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 32211 1111 11123568999999999999999999999999999997 999999
Q ss_pred CCCHHHHHHHHHcCC-CCCCCCC
Q 002342 900 GKTRQKTFANILHKD-LKFPSST 921 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~-~~~p~~~ 921 (934)
+.+..+++..|.+|. ++-|...
T Consensus 407 ~msn~ev~~~le~GyRlp~P~~C 429 (468)
T KOG0197|consen 407 GMSNEEVLELLERGYRLPRPEGC 429 (468)
T ss_pred CCCHHHHHHHHhccCcCCCCCCC
Confidence 999999999998876 4556554
No 60
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7e-36 Score=333.78 Aligned_cols=223 Identities=38% Similarity=0.701 Sum_probs=194.3
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+|++.+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788999999999999999999999999999998754434445566778999998885 577889999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++|++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|.+||.+.+...+++
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCC
Q 002342 909 NILHKDLKFPSST 921 (934)
Q Consensus 909 ~i~~~~~~~p~~~ 921 (934)
.+..+...+|...
T Consensus 212 ~i~~~~~~~p~~~ 224 (323)
T cd05615 212 SIMEHNVSYPKSL 224 (323)
T ss_pred HHHhCCCCCCccC
Confidence 9999888888653
No 61
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-36 Score=342.37 Aligned_cols=260 Identities=39% Similarity=0.678 Sum_probs=206.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++||||+++++++.++++.|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998754444455677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999775 459999999999999999999999999999999999999999999999999986543321000
Q ss_pred CCcchhhh--ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 829 LPTTNEKK--RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 829 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........ .......................||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 00000000 0000000000000011223456799999999999999999999999999999999999999999998888
Q ss_pred HHHHHc--CCCCCCCCCCCCcccCCC
Q 002342 907 FANILH--KDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 907 ~~~i~~--~~~~~p~~~~~s~~~k~l 930 (934)
+.++.. ..+.+|.....+.++++|
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~l 264 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDL 264 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHH
Confidence 888887 667777665445544443
No 62
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.7e-36 Score=334.06 Aligned_cols=218 Identities=39% Similarity=0.746 Sum_probs=191.0
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999865443444556777899998876 799999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~---------- 148 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF---------- 148 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999853210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 149 -----------------NGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred -----------------CCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 011123457999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCC
Q 002342 914 DLKFPSST 921 (934)
Q Consensus 914 ~~~~p~~~ 921 (934)
...+|.+.
T Consensus 212 ~~~~~~~~ 219 (320)
T cd05590 212 EVVYPTWL 219 (320)
T ss_pred CCCCCCCC
Confidence 88888753
No 63
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=328.16 Aligned_cols=237 Identities=33% Similarity=0.584 Sum_probs=209.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..+..+.|..-++||+|+||.||-++-+.||+.||+|.+.|+.++.+.......+|..||..++.++||.+-..|++.+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 34567789999999999999999999999999999999988777777777778899999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||..|+||+|.-+|...+...|++..+++|+.+|++||++||..+||+|||||+|||+++.|+|.|.|+|+|..++.
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999999887777899999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~-- 901 (934)
. .....-+||.+|||||++.+..|++..|+|||||+||+|+.|+.||...
T Consensus 340 g----------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 G----------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred C----------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 1 1112338999999999999999999999999999999999999999863
Q ss_pred --CHHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 902 --TRQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 902 --~~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
..+++-+++++....+|.. .|.++|+|
T Consensus 392 Kvk~eEvdrr~~~~~~ey~~k--FS~eaksl 420 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYSDK--FSEEAKSL 420 (591)
T ss_pred hhhHHHHHHHHhcchhhcccc--cCHHHHHH
Confidence 3357778888888888854 46666654
No 64
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-37 Score=314.80 Aligned_cols=237 Identities=29% Similarity=0.468 Sum_probs=199.5
Q ss_pred cccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEE
Q 002342 671 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 671 y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
|++. ..||+|+|+.|--+....++..||||++.|. ......++.+|++++.++ .|+||++|+++|++++.+||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4443 4689999999999999999999999999875 345567889999999999 6999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~a~~~~~~~ 825 (934)
|-|.||+|..+++++ +.|++.++..+.++|+.||.|||.+||.||||||+|||..+.++ ||||||.+...+....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999886 56999999999999999999999999999999999999976654 7999999874322111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh-----cCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-----~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.- + ...-....+.+|+..|||||+. ....|+.++|.||||++||-|+.|.+||.|
T Consensus 234 ~~--------s------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 DC--------S------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CC--------C------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 10 0 0011233466899999999998 345788999999999999999999999986
Q ss_pred CCH---------------HHHHHHHHcCCCCCCC--CCCCCcccCCCCC
Q 002342 901 KTR---------------QKTFANILHKDLKFPS--STPSSCKAANVPP 932 (934)
Q Consensus 901 ~~~---------------~~~~~~i~~~~~~~p~--~~~~s~~~k~l~~ 932 (934)
... ...+..|.+|.+.||. |..+|+.+|||+.
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlis 342 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLIS 342 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHH
Confidence 432 4578899999999995 7789999999863
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-35 Score=332.34 Aligned_cols=220 Identities=40% Similarity=0.766 Sum_probs=191.4
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH---HhCCCCCccceeEEEEeCCeEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il---~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
|++++.||+|+||.||++.+..+++.||||++.+...........+.+|+.++ +.++||||+++++++...++.|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999865433444556677777665 456799999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~---- 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG---- 153 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC----
Confidence 999999999988754 3599999999999999999999999999999999999999999999999999843210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........+|++.|||||++.+..++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 154 -----------------------FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred -----------------------CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 011223567999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCC
Q 002342 908 ANILHKDLKFPSS 920 (934)
Q Consensus 908 ~~i~~~~~~~p~~ 920 (934)
..+..+...+|..
T Consensus 211 ~~i~~~~~~~p~~ 223 (324)
T cd05589 211 DSIVNDEVRYPRF 223 (324)
T ss_pred HHHHhCCCCCCCC
Confidence 9999888877754
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.9e-36 Score=336.10 Aligned_cols=217 Identities=42% Similarity=0.801 Sum_probs=191.0
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||+|+||.||++.+..+++.||+|++.+...........+..|+++++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998755444555667788999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
+|..++... +.+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988664 459999999999999999999997 79999999999999999999999999998432100
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
.......+||+.|||||++.+..++.++|||||||+||+|++|..||.+.+....+..+..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01122457999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
.+.+|..
T Consensus 212 ~~~~p~~ 218 (325)
T cd05594 212 EIRFPRT 218 (325)
T ss_pred CCCCCCC
Confidence 8888764
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.9e-36 Score=333.56 Aligned_cols=218 Identities=41% Similarity=0.753 Sum_probs=191.4
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+ +||||+.++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999875444445556677899999876 899999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~---------- 148 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL---------- 148 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceeccc----------
Confidence 9999988764 4589999999999999999999999999999999999999999999999999853210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 149 -----------------NGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred -----------------CCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 011123457999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 002342 914 DLKFPSST 921 (934)
Q Consensus 914 ~~~~p~~~ 921 (934)
...+|.+.
T Consensus 212 ~~~~p~~~ 219 (321)
T cd05591 212 DVLYPVWL 219 (321)
T ss_pred CCCCCCCC
Confidence 88888653
No 68
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.6e-36 Score=331.63 Aligned_cols=217 Identities=41% Similarity=0.808 Sum_probs=187.8
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999875443444555666777777754 899999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 35999999999999999999999999999999999999999999999999998532110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 11223567999999999999999999999999999999999999999999999999888877
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...+|..
T Consensus 212 ~~~~~~~ 218 (316)
T cd05592 212 RPHFPRW 218 (316)
T ss_pred CCCCCCC
Confidence 7666654
No 69
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=336.47 Aligned_cols=228 Identities=39% Similarity=0.697 Sum_probs=209.7
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.++...+++++..||-|+||.|=+|........+|+|+++|..+.+..+.+.+..|.+||..+++|+||++|-.|.+..+
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY 494 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence 34556789999999999999999999877777799999999888888888899999999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+||+||-|-||.|+..+..+ +.|.+..+++|+.-+++|++|||++|||+|||||+|++++.+|.+||.|||+|+...
T Consensus 495 vYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~- 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG- 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhc-
Confidence 99999999999999999876 459999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
....+.++||||.|.|||++..++++.++|.||||+++|||++|.|||.+.++
T Consensus 572 ---------------------------~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 572 ---------------------------SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred ---------------------------cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC--CCCCCCC
Q 002342 904 QKTFANILHKD--LKFPSST 921 (934)
Q Consensus 904 ~~~~~~i~~~~--~~~p~~~ 921 (934)
..+|..|++|- +.||...
T Consensus 625 mktYn~ILkGid~i~~Pr~I 644 (732)
T KOG0614|consen 625 MKTYNLILKGIDKIEFPRRI 644 (732)
T ss_pred HHHHHHHHhhhhhhhccccc
Confidence 99999999976 5677543
No 70
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-35 Score=333.23 Aligned_cols=224 Identities=38% Similarity=0.674 Sum_probs=191.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..++|+||+.++++|.+++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998644334445566888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++|++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--- 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC---
Confidence 999999999998653 3459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+||+.|||||++.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 157 -----------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 011123469999999999963 4567899999999999999999999999988
Q ss_pred HHHHHHHHcCC--CCCCC
Q 002342 904 QKTFANILHKD--LKFPS 919 (934)
Q Consensus 904 ~~~~~~i~~~~--~~~p~ 919 (934)
.+.+..+.... +.+|.
T Consensus 214 ~~~~~~i~~~~~~~~~~~ 231 (331)
T cd05597 214 VETYGKIMNHKEHFQFPP 231 (331)
T ss_pred HHHHHHHHcCCCcccCCC
Confidence 88888887654 34443
No 71
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.2e-36 Score=335.39 Aligned_cols=234 Identities=36% Similarity=0.614 Sum_probs=195.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..++|+||+.+++++...++.|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997643334445566788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+.||+|.+++.... ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--- 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC---
Confidence 9999999999997642 458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+||+.|||||++.+ ..++.++|+|||||+||+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 011223579999999999976 4678899999999999999999999999988
Q ss_pred HHHHHHHHcCC--CCCCCCC-CCCcccCC
Q 002342 904 QKTFANILHKD--LKFPSST-PSSCKAAN 929 (934)
Q Consensus 904 ~~~~~~i~~~~--~~~p~~~-~~s~~~k~ 929 (934)
.+.+..+.... +++|... ..+..+++
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~ 242 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKD 242 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHH
Confidence 88888887654 4445432 23444444
No 72
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-35 Score=331.73 Aligned_cols=217 Identities=42% Similarity=0.772 Sum_probs=186.9
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||+||++.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333334445555655 46789999999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---------- 148 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc----------
Confidence 9999998764 4599999999999999999999999999999999999999999999999999843210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 149 -----------------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred -----------------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 011223457999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
.+.++..
T Consensus 212 ~~~~~~~ 218 (323)
T cd05575 212 PLRLKPN 218 (323)
T ss_pred CCCCCCC
Confidence 8776654
No 73
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.8e-35 Score=329.38 Aligned_cols=224 Identities=39% Similarity=0.746 Sum_probs=190.8
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|.++.++..||+|++.+..............|..++..+ +||||+++++++.+.+++|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999875433334455677788888765 899999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~---------- 148 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF---------- 148 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999999843110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 149 -----------------GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred -----------------CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 001123467999999999999999999999999999999999999999999998889888887
Q ss_pred CCCCCCCCCCCcccCC
Q 002342 914 DLKFPSSTPSSCKAAN 929 (934)
Q Consensus 914 ~~~~p~~~~~s~~~k~ 929 (934)
...+|.+. +.++++
T Consensus 212 ~~~~~~~~--~~~~~~ 225 (316)
T cd05620 212 TPHYPRWI--TKESKD 225 (316)
T ss_pred CCCCCCCC--CHHHHH
Confidence 77777653 444443
No 74
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.3e-35 Score=331.28 Aligned_cols=217 Identities=44% Similarity=0.798 Sum_probs=186.3
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++++.+.+..|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333333444555554 67889999999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE---------- 148 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC----------
Confidence 9999888654 4589999999999999999999999999999999999999999999999999843210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+...++..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 149 -----------------PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred -----------------CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 011223457999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...+|..
T Consensus 212 ~~~~~~~ 218 (321)
T cd05603 212 PLQLPGG 218 (321)
T ss_pred CCCCCCC
Confidence 8777754
No 75
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.3e-36 Score=335.79 Aligned_cols=235 Identities=38% Similarity=0.690 Sum_probs=199.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998764444455667889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--- 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK--- 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC---
Confidence 9999999999997652 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
........||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 -----------------------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred -----------------------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 00112346899999999997 4567789999999999999999999999988
Q ss_pred HHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 903 RQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 903 ~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
....+.+|.+.. +.+|.....+..+++|
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 243 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDL 243 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHH
Confidence 888888887643 4666655555555544
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.5e-35 Score=331.32 Aligned_cols=217 Identities=41% Similarity=0.743 Sum_probs=184.7
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46899999999999999999999999998643322233334444444 56889999999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~---------- 148 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---------- 148 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc----------
Confidence 9999998764 4588999999999999999999999999999999999999999999999999853210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 149 -----------------HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred -----------------CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 011223557999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...++..
T Consensus 212 ~~~~~~~ 218 (325)
T cd05602 212 PLQLKPN 218 (325)
T ss_pred CcCCCCC
Confidence 7766543
No 77
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.2e-35 Score=333.21 Aligned_cols=235 Identities=35% Similarity=0.614 Sum_probs=195.6
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++.++.+++.||+|++.+...........+.+|+.++..++|++|+.+++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999987643333444556788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~---- 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED---- 155 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC----
Confidence 9999999999997642 35899999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........+||+.|||||++. ...++.++|||||||+||+|++|++||.+.+.
T Consensus 156 ----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 156 ----------------------GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred ----------------------CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 001122357999999999996 34678899999999999999999999999999
Q ss_pred HHHHHHHHcCCC--CCCCCC-CCCcccCCC
Q 002342 904 QKTFANILHKDL--KFPSST-PSSCKAANV 930 (934)
Q Consensus 904 ~~~~~~i~~~~~--~~p~~~-~~s~~~k~l 930 (934)
.+.+.++..... .+|... ..+..+++|
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~l 243 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDL 243 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHH
Confidence 999999887653 444432 234444443
No 78
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.9e-35 Score=330.26 Aligned_cols=219 Identities=46% Similarity=0.796 Sum_probs=188.8
Q ss_pred ccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
++.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 47889999999764321 22334567789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.+++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------ 152 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH------ 152 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc------
Confidence 99999999998764 4589999999999999999999999999999999999999999999999999843210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....+..
T Consensus 153 ---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 153 ---------------------EGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ---------------------CCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 01112345799999999999998899999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCC
Q 002342 910 ILHKDLKFPSST 921 (934)
Q Consensus 910 i~~~~~~~p~~~ 921 (934)
+..+.+.+|...
T Consensus 212 ~~~~~~~~~~~~ 223 (323)
T cd05584 212 ILKGKLNLPPYL 223 (323)
T ss_pred HHcCCCCCCCCC
Confidence 999988887653
No 79
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=330.18 Aligned_cols=230 Identities=26% Similarity=0.418 Sum_probs=197.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|+.+..||+|+||.||++.+..+++.||+|++.-.. .......+.+|+.+|.+++++||.++|+.|-.+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46888899999999999999999999999999997543 4556778999999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||.||++.+.++.. ..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++..+.
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~------ 162 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLT------ 162 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeee------
Confidence 999999999999763 446899999999999999999999999999999999999999999999999985432
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......+++|||.|||||++....|+.++||||||++.+||++|.|||....++.++.
T Consensus 163 ---------------------~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf 221 (467)
T KOG0201|consen 163 ---------------------NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF 221 (467)
T ss_pred ---------------------chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence 11223478999999999999999999999999999999999999999999988877766
Q ss_pred HHHcCCCCCCCCCCCCcccCCC
Q 002342 909 NILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 909 ~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.|-+..++.-.. ..|...|+|
T Consensus 222 lIpk~~PP~L~~-~~S~~~kEF 242 (467)
T KOG0201|consen 222 LIPKSAPPRLDG-DFSPPFKEF 242 (467)
T ss_pred eccCCCCCcccc-ccCHHHHHH
Confidence 665433322222 345555554
No 80
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.6e-35 Score=330.08 Aligned_cols=217 Identities=38% Similarity=0.733 Sum_probs=186.1
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||++.+..+++.||+|++++...........+..|..++..+ +||||++++++|.+.+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876554555566788899999998 799999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999888664 4599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---------CHH
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 904 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~---------~~~ 904 (934)
........+||+.|+|||++.+..++.++|+|||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 011223467999999999999999999999999999999999999999631 222
Q ss_pred HHHHHHHcCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSS 920 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~ 920 (934)
..++.+..+.+.+|..
T Consensus 212 ~~~~~~~~~~~~~p~~ 227 (329)
T cd05588 212 YLFQVILEKQIRIPRS 227 (329)
T ss_pred HHHHHHHcCCCCCCCC
Confidence 3566777787787764
No 81
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.8e-35 Score=326.78 Aligned_cols=217 Identities=39% Similarity=0.764 Sum_probs=186.7
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|++..+++.||+|++.+..............|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999875432333445667788888764 999999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~---------- 148 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML---------- 148 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999999843110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++++.+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 149 -----------------GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred -----------------CCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 001123457999999999999999999999999999999999999999999988888888877
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...+|.+
T Consensus 212 ~~~~~~~ 218 (316)
T cd05619 212 NPCYPRW 218 (316)
T ss_pred CCCCCcc
Confidence 7767654
No 82
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-36 Score=307.71 Aligned_cols=231 Identities=37% Similarity=0.706 Sum_probs=207.7
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~ 740 (934)
..+.+.+++|.++++||+|+|.+|.+++++++.+.||+|+++|....+...+.-...|..+..+. +||++|-++.+|++
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34557789999999999999999999999999999999999998888888888888898888876 79999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
+..+++|.||++||+|.-+++++ +.++++.++++..+|+.||.|||++|||.||||.+|||++..|++||+|+|+|+.
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999999999998886 4599999999999999999999999999999999999999999999999999954
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
. ..+...++++||||.|+|||++.+..|.+.+|+|+||++++||+.|+.||.-
T Consensus 401 ~---------------------------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 G---------------------------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred C---------------------------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 2 2234567789999999999999999999999999999999999999999962
Q ss_pred -------C-CHHHHHHHHHcCCCCCCCCC
Q 002342 901 -------K-TRQKTFANILHKDLKFPSST 921 (934)
Q Consensus 901 -------~-~~~~~~~~i~~~~~~~p~~~ 921 (934)
. +..=.++-|+++++.+|...
T Consensus 454 vgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhccccccee
Confidence 2 22335777889999999865
No 83
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.4e-35 Score=326.65 Aligned_cols=217 Identities=41% Similarity=0.771 Sum_probs=190.8
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||+||+|.+..+++.||+|++.+...........+.+|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544455566778899999888 799999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---------- 148 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL---------- 148 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc----------
Confidence 9999988764 3599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....+..+..+
T Consensus 149 -----------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 149 -----------------GGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred -----------------CCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 011123457999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...+|..
T Consensus 212 ~~~~~~~ 218 (318)
T cd05570 212 EVRYPRW 218 (318)
T ss_pred CCCCCCc
Confidence 8887764
No 84
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.6e-35 Score=327.50 Aligned_cols=216 Identities=44% Similarity=0.762 Sum_probs=186.0
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||+||++.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333344455556655 46779999999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~---------- 148 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA---------- 148 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC----------
Confidence 9999888654 4599999999999999999999999999999999999999999999999999843210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..++++.+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 149 -----------------QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred -----------------CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 011123457999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCC
Q 002342 914 DLKFPS 919 (934)
Q Consensus 914 ~~~~p~ 919 (934)
...++.
T Consensus 212 ~~~~~~ 217 (325)
T cd05604 212 PLVLRP 217 (325)
T ss_pred CccCCC
Confidence 776654
No 85
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.8e-35 Score=327.87 Aligned_cols=217 Identities=39% Similarity=0.735 Sum_probs=185.5
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876554555666788899998877 899999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~---------- 148 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC----------
Confidence 9999888664 4599999999999999999999999999999999999999999999999999843210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC---------CCHH
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 904 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~---------~~~~ 904 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.. ....
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 01122346799999999999999999999999999999999999999952 2223
Q ss_pred HHHHHHHcCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSS 920 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~ 920 (934)
.+.+.+..+...+|..
T Consensus 212 ~~~~~i~~~~~~~p~~ 227 (329)
T cd05618 212 YLFQVILEKQIRIPRS 227 (329)
T ss_pred HHHHHHhcCCCCCCCC
Confidence 4566777777777764
No 86
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=311.19 Aligned_cols=216 Identities=27% Similarity=0.428 Sum_probs=189.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-----CC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~ 742 (934)
...|..++.||.|+||.|+.+.++.+|..||||.+.. .+...-..++..+|+++|+.++|+||+.+++++.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3567778999999999999999999999999998764 24566677889999999999999999999999975 35
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|+|+|+| +.+|...++.+ +.+++..++.++.||+.||.|+|+.||+||||||+|+|++.+..+||||||+|+...
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 789999999 89999999875 449999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. ......+..+.|.+|.|||++. ...|+.++||||+||++.||++|++.|.|.
T Consensus 177 ~~-------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 177 KF-------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred cc-------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 21 0011224457899999999985 468899999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+..++++.|..
T Consensus 232 d~v~Ql~lI~~ 242 (359)
T KOG0660|consen 232 DYVHQLQLILE 242 (359)
T ss_pred chHHHHHHHHH
Confidence 99999988875
No 87
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=8.3e-35 Score=325.69 Aligned_cols=217 Identities=39% Similarity=0.723 Sum_probs=185.7
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+.+++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876544555667788999999888 699999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~---------- 148 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG---------- 148 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC----------
Confidence 9999988664 4599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC-------CCHHHH
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-------KTRQKT 906 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~-------~~~~~~ 906 (934)
........+||+.|+|||++.+..++.++|||||||+||+|++|.+||.. ......
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 149 -----------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred -----------------CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01122346799999999999999999999999999999999999999963 222345
Q ss_pred HHHHHcCCCCCCCC
Q 002342 907 FANILHKDLKFPSS 920 (934)
Q Consensus 907 ~~~i~~~~~~~p~~ 920 (934)
++.+..+...+|..
T Consensus 212 ~~~~~~~~~~~p~~ 225 (327)
T cd05617 212 FQVILEKPIRIPRF 225 (327)
T ss_pred HHHHHhCCCCCCCC
Confidence 66677777777764
No 88
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.6e-35 Score=328.23 Aligned_cols=215 Identities=41% Similarity=0.739 Sum_probs=185.2
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
||+|+||+||++++..+++.||+|++.+..............|..++..+ +||||+.++++|...+.+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765433334445556677777665 699999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~---------- 148 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLT---------- 148 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999853211
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~ 912 (934)
........+||+.|||||++.+. .++.++|||||||++|+|++|+.||.+.+..+.++.+..
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 149 -----------------DNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred -----------------CCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 01122356799999999999764 478899999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 002342 913 KDLKFPSS 920 (934)
Q Consensus 913 ~~~~~p~~ 920 (934)
+...+|..
T Consensus 212 ~~~~~~~~ 219 (330)
T cd05586 212 GKVRFPKN 219 (330)
T ss_pred CCCCCCCc
Confidence 88888764
No 89
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=328.11 Aligned_cols=231 Identities=30% Similarity=0.530 Sum_probs=207.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.......|.+.+.||+|.|++|.++++.-++..||||++.|..... .....+.+|+++|+.|+|||||+++.+...+..
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 3455678999999999999999999999999999999999875544 444458999999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||||+.+|.+++++.+.+ .+.+..++.++.|++.|++|||+++|||||||.+||||+.+.++||+|||++..+.
T Consensus 130 lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999999998763 37779999999999999999999999999999999999999999999999995432
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
......++||++.|.|||++.+..| .+.+|+||||++||.|+.|..||.|.+
T Consensus 207 ---------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 207 ---------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred ---------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 3345668899999999999999877 469999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCc
Q 002342 903 RQKTFANILHKDLKFPSSTPSSC 925 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~~~s~ 925 (934)
..+.-.+.+.|++.+|.++..+|
T Consensus 260 lk~Lr~rvl~gk~rIp~~ms~dc 282 (596)
T KOG0586|consen 260 LKELRPRVLRGKYRIPFYMSCDC 282 (596)
T ss_pred cccccchheeeeecccceeechh
Confidence 99999999999999999874444
No 90
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-34 Score=315.23 Aligned_cols=214 Identities=25% Similarity=0.410 Sum_probs=182.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 568999999999999999999999999999999987532 122234567899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||++ ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99995 5899888654 345899999999999999999999999999999999999999999999999998542110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........|++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011123468999999999876 5688999999999999999999999999888877
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+..+..
T Consensus 213 ~~~~~~ 218 (288)
T cd07871 213 LHLIFR 218 (288)
T ss_pred HHHHHH
Confidence 766654
No 91
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.9e-34 Score=313.82 Aligned_cols=208 Identities=35% Similarity=0.618 Sum_probs=181.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++++..++++|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999876544333444556789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999998886654456999999999999999999999999999999999999999999999999998542110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 01123478999999999999999999999999999999999999999876643
No 92
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=313.02 Aligned_cols=207 Identities=25% Similarity=0.462 Sum_probs=176.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--C---eE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T---HV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~---~~ 744 (934)
.|.-.+.+|+|+||.||++....++..+|||..-.+. +.-.+|+.||+.++|||||+|..+|... + +.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 5888899999999999999999999999999765431 2344699999999999999999888632 2 55
Q ss_pred EEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCccc
Q 002342 745 CLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~ 821 (934)
.+||||| .-+|+++++.. ....++.-.++.++.||++||.|||+.||+||||||.|||++.+ |.+||||||+|+..
T Consensus 98 nlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 6899999 67899888731 23558999999999999999999999999999999999999976 99999999999765
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ....+...|..|.|||.+.+ ..|+.+.||||.||++.||+.|++.|.|
T Consensus 177 ~~~----------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VKG----------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred ccC----------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 321 12245578999999999987 4789999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
++..+++..|.+
T Consensus 229 ~s~~dQL~eIik 240 (364)
T KOG0658|consen 229 DSSVDQLVEIIK 240 (364)
T ss_pred CCHHHHHHHHHH
Confidence 999998887765
No 93
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4e-34 Score=313.63 Aligned_cols=215 Identities=25% Similarity=0.380 Sum_probs=182.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999876422 2334566788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++++.|..+... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 154 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--- 154 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---
Confidence 99988766555432 2459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........||+.|+|||++.+..++.++|+|||||++|+|++|++||.+.+..+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 155 -----------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred -----------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223568999999999999899999999999999999999999999887766655
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 212 ~~~~ 215 (287)
T cd07848 212 TIQK 215 (287)
T ss_pred HHHH
Confidence 5443
No 94
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.9e-35 Score=324.54 Aligned_cols=217 Identities=44% Similarity=0.785 Sum_probs=188.2
Q ss_pred ccccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
++.||+|+||.||++++. .+++.||+|++.+... .......+.+|+.+|++++||||+++++++...+.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 367999999999999873 5789999999986432 222334567899999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------ 151 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------ 151 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC------
Confidence 9999999998664 45999999999999999999999999999999999999999999999999998542110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i 910 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01223457999999999999988999999999999999999999999999999999999
Q ss_pred HcCCCCCCCC
Q 002342 911 LHKDLKFPSS 920 (934)
Q Consensus 911 ~~~~~~~p~~ 920 (934)
..+.+.+|..
T Consensus 211 ~~~~~~~p~~ 220 (318)
T cd05582 211 LKAKLGMPQF 220 (318)
T ss_pred HcCCCCCCCC
Confidence 9888888764
No 95
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-34 Score=322.87 Aligned_cols=223 Identities=44% Similarity=0.761 Sum_probs=184.4
Q ss_pred CcccccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .......+..|+.+++.+ +||||+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999874 47899999999764322 223445677899999999 599999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 45999999999999999999999999999999999999999999999999998542110
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC--
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~-- 901 (934)
........+||+.|||||++.+. .++.++|||||||++|+|++|+.||...
T Consensus 159 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 --------------------------EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred --------------------------CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 01112345799999999999875 4788999999999999999999999743
Q ss_pred --CHHHHHHHHHcCCCCCCCC
Q 002342 902 --TRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 902 --~~~~~~~~i~~~~~~~p~~ 920 (934)
....+...+......+|..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFPSF 233 (332)
T ss_pred CCCHHHHHHHHhcCCCCCCCC
Confidence 3345556666666666543
No 96
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.9e-34 Score=324.31 Aligned_cols=223 Identities=25% Similarity=0.353 Sum_probs=179.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~ 738 (934)
.+..++|++.+.||.|+||.||+|.+. .++..||+|.+.... .......+.+|+.+|..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 455678999999999999999999853 345789999987532 233456788999999999 899999999988
Q ss_pred EeC-CeEEEEEEccCCCCchhhhccCC-----------------------------------------------------
Q 002342 739 QTK-THVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 764 (934)
Q Consensus 739 ~~~-~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------- 764 (934)
... ..+|+||||+++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 754 46899999999999999886531
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhc
Q 002342 765 -------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 837 (934)
Q Consensus 765 -------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~ 837 (934)
...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~----------- 229 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 229 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-----------
Confidence 12477888999999999999999999999999999999999999999999999854321100
Q ss_pred cccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHcCC
Q 002342 838 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK-TFANILHKD 914 (934)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~-~~~~i~~~~ 914 (934)
........+++.|||||++.+..++.++|||||||+||+|++ |.+||.+....+ ....+..+.
T Consensus 230 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 294 (338)
T cd05102 230 --------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT 294 (338)
T ss_pred --------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC
Confidence 011123356789999999999999999999999999999996 999998866544 344444443
No 97
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-34 Score=335.75 Aligned_cols=221 Identities=24% Similarity=0.389 Sum_probs=190.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++||||++++++|..++++||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999999887 788999976532 33445567789999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 747 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||++||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999999887532 2345899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
. ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus 223 ~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~ 277 (478)
T PTZ00267 223 V-------------------------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR 277 (478)
T ss_pred c-------------------------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0 011234567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCC
Q 002342 905 KTFANILHKDLK 916 (934)
Q Consensus 905 ~~~~~i~~~~~~ 916 (934)
+++..+..+...
T Consensus 278 ~~~~~~~~~~~~ 289 (478)
T PTZ00267 278 EIMQQVLYGKYD 289 (478)
T ss_pred HHHHHHHhCCCC
Confidence 999998887653
No 98
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=324.53 Aligned_cols=224 Identities=23% Similarity=0.327 Sum_probs=193.3
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..|.+..+...+...||+|.||+||++++-++ ||||+++... ..++..+.|++|+.+|++.+|.||+-|.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 34566677888999999999999999999664 9999998753 4667899999999999999999999999999988
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
.. .||+.+|+|.+|+.+++... ..|.....+.|++||++||.|||.++|||||||..||++.++++|||+|||++...
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 77 99999999999999998765 45999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---CCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.. + ..........|+..|||||++.. .+|++.+|||||||++|||++|..||
T Consensus 539 ~~-------------w------------~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 TR-------------W------------SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred ee-------------e------------ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 11 0 11122234468999999999954 57899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCC
Q 002342 899 RGKTRQKTFANILHKDLK 916 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~ 916 (934)
...+..+++.++=+|.+.
T Consensus 594 si~~~dqIifmVGrG~l~ 611 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRGYLM 611 (678)
T ss_pred CCCChhheEEEecccccC
Confidence 988888888888777553
No 99
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=320.47 Aligned_cols=229 Identities=29% Similarity=0.482 Sum_probs=198.3
Q ss_pred cccc--cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 671 FRPI--KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 671 y~i~--~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
|++. +.||+|.||+||-+.++++|+.||||++.|-.+..++. ..+.+|+.||+++.||.||.|...|++.+.++.||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 4443 68999999999999999999999999999876655544 78899999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~---~~vkl~DFG~a~~~~~~~ 825 (934)
|-+ .|+..+++.....+.+++...++++.||+.||.|||.+||+|+||||+|||+.+. -.+||||||+|++.+.+.
T Consensus 643 EKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 643 EKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 999 5666666666556779999999999999999999999999999999999999754 379999999998765322
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
. ..+.+|||.|+|||++..++|+..-|+||.|+++|--+.|..||. ..++
T Consensus 722 F----------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN--EdEd 771 (888)
T KOG4236|consen 722 F----------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN--EDED 771 (888)
T ss_pred h----------------------------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC--Cccc
Confidence 1 235689999999999999999999999999999999999999995 5567
Q ss_pred HHHHHHcCCCCCCCC--CCCCcccCCCC
Q 002342 906 TFANILHKDLKFPSS--TPSSCKAANVP 931 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~--~~~s~~~k~l~ 931 (934)
+-.+|.+..|.||.. ..+|..+-||+
T Consensus 772 IndQIQNAaFMyPp~PW~eis~~AidlI 799 (888)
T KOG4236|consen 772 INDQIQNAAFMYPPNPWSEISPEAIDLI 799 (888)
T ss_pred hhHHhhccccccCCCchhhcCHHHHHHH
Confidence 788889999999964 56777766653
No 100
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.7e-34 Score=314.27 Aligned_cols=212 Identities=25% Similarity=0.437 Sum_probs=177.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875421 22234567899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 578888776542 45899999999999999999999999999999999999999999999999998532110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QK 905 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~-~~ 905 (934)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+... .+
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011123468999999999875 4578899999999999999999999987544 34
Q ss_pred HHHHH
Q 002342 906 TFANI 910 (934)
Q Consensus 906 ~~~~i 910 (934)
.+..+
T Consensus 213 ~~~~~ 217 (303)
T cd07869 213 QLERI 217 (303)
T ss_pred HHHHH
Confidence 44443
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-33 Score=309.56 Aligned_cols=216 Identities=33% Similarity=0.598 Sum_probs=179.9
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||+|+||+||++.+..+++.||+|.+.+...........+..|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999998765443444456677899999999999999999999999999999999999999
Q ss_pred hhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 757 FLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 757 ~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
..++.. .....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~---------- 150 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG---------- 150 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC----------
Confidence 887743 22346999999999999999999999999999999999999999999999999998543210
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANI 910 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~----~~~~~~i 910 (934)
........||+.|+|||++.+..++.++|+|||||++|+|++|+.||..... ......+
T Consensus 151 -----------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 151 -----------------QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred -----------------CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 0112245799999999999999999999999999999999999999986543 2344445
Q ss_pred HcCCCCCCC
Q 002342 911 LHKDLKFPS 919 (934)
Q Consensus 911 ~~~~~~~p~ 919 (934)
..+...+|.
T Consensus 214 ~~~~~~~~~ 222 (280)
T cd05608 214 LNDSVTYPD 222 (280)
T ss_pred cccCCCCcc
Confidence 555444443
No 102
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.5e-34 Score=309.83 Aligned_cols=214 Identities=33% Similarity=0.591 Sum_probs=179.7
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||+|+||.||++.++.+|+.||+|.+.+...........+..|+++++.++||||+++++++..+.+.|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999998764433333344556799999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------ 148 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------ 148 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC------------
Confidence 98886655556899999999999999999999999999999999999999999999999998543210
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHc
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 912 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~----~~~~~~i~~ 912 (934)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||.+... .++...+..
T Consensus 149 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 149 ----------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred ----------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 011234689999999999998899999999999999999999999976432 345555555
Q ss_pred CCCCCC
Q 002342 913 KDLKFP 918 (934)
Q Consensus 913 ~~~~~p 918 (934)
+...++
T Consensus 213 ~~~~~~ 218 (277)
T cd05607 213 DEVKFE 218 (277)
T ss_pred cccccc
Confidence 555444
No 103
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.1e-33 Score=312.57 Aligned_cols=261 Identities=59% Similarity=1.016 Sum_probs=207.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||+|.+..+++.||+|.+.+...........+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+.+++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987655679999999999999999999999999999999999999999999999999986543221110
Q ss_pred CCcchhhhccc--cCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........... ....................||..|+|||++.+..++.++||||||+++|+|++|+.||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000011111222334466899999999999999999999999999999999999999999998888
Q ss_pred HHHHHcCCCCCCCCCCCCcccCC
Q 002342 907 FANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
+..+......+|.....+..+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~ 263 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARD 263 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHH
Confidence 88888877777765444444443
No 104
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.8e-33 Score=312.81 Aligned_cols=210 Identities=27% Similarity=0.456 Sum_probs=184.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++++.||+|+||.||++.+..++..||+|.+.... .......+.+|+++|+.++||||+++++++..++..+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 44679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 999999999999999764 3489999999999999999999986 699999999999999999999999999853211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0122457999999999999999999999999999999999999999877766
Q ss_pred HHHH
Q 002342 905 KTFA 908 (934)
Q Consensus 905 ~~~~ 908 (934)
++..
T Consensus 209 ~~~~ 212 (331)
T cd06649 209 ELEA 212 (331)
T ss_pred HHHH
Confidence 5443
No 105
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=301.00 Aligned_cols=228 Identities=25% Similarity=0.398 Sum_probs=196.6
Q ss_pred cCCcccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe----C
Q 002342 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----K 741 (934)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~----~ 741 (934)
.++|.+. ++||-|-.|+|..+.++.++..||+|++... ....+|+++.=+. .|||||.++++|.+ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4677776 5689999999999999999999999987532 4566788875554 79999999999864 4
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~---~~vkl~DFG~a 818 (934)
.++.+|||.|+||.|+..++.++...|++.++..|++||+.|+.|||+.+|.||||||+|+|++.. -.+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 678899999999999999999988899999999999999999999999999999999999999754 36899999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
+.... .....+.|-||.|.|||++-..+|+..+|+|||||++|-|+.|.|||
T Consensus 212 K~t~~----------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQE----------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCC----------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 64211 12334568899999999999999999999999999999999999999
Q ss_pred CCCCH----HHHHHHHHcCCCCCCC--CCCCCcccCCCC
Q 002342 899 RGKTR----QKTFANILHKDLKFPS--STPSSCKAANVP 931 (934)
Q Consensus 899 ~~~~~----~~~~~~i~~~~~~~p~--~~~~s~~~k~l~ 931 (934)
..... ..+-.+|..|.+.||. |...|.++|||+
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlI 302 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLI 302 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHH
Confidence 87554 5678899999999986 678888888875
No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=332.62 Aligned_cols=224 Identities=29% Similarity=0.423 Sum_probs=191.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC---
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--- 742 (934)
...++|.+.+.||+|+||+||++++..+++.||||++..... .......+.+|+.++..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999999999999999999876533 3445567889999999999999999988875432
Q ss_pred -----eEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 743 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 743 -----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
.+++||||+++|+|.+++... ....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 368999999999999998643 2346999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
|+++...... ........+||+.|+|||++.+..++.++|||||||+||+|++|+
T Consensus 188 Gls~~~~~~~-------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATV-------------------------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeeccccc-------------------------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 9986432110 011223568999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCC
Q 002342 896 TPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~ 915 (934)
.||.+.+..+++..+..+.+
T Consensus 243 ~Pf~~~~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 243 RPFDGENMEEVMHKTLAGRY 262 (496)
T ss_pred CCCCCCCHHHHHHHHhcCCC
Confidence 99999999889888887765
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=337.33 Aligned_cols=242 Identities=28% Similarity=0.406 Sum_probs=198.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEE-Ee--
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASF-QT-- 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~-~~-- 740 (934)
.+...+++|.+.|.+|||+.||+|.+...+..||||.+-.. +...++.+.+|+.+|+.|. |+|||.|++.. ..
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence 34566789999999999999999999888899999988643 7788899999999999995 99999999942 21
Q ss_pred ----CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEEe
Q 002342 741 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 741 ----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vkl~D 814 (934)
.-.++|+||||.||+|.+++..+....|++.++..|+.|+|+||.+||..+ |||||||-+||||+.+|+.||||
T Consensus 110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCc
Confidence 135789999999999999998665556999999999999999999999997 99999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh---cCCCCCchhHHHHHHHHHHHH
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~s~~~DiwSlG~iL~el 891 (934)
||.+........ ...+. .. ....-...-|+.|+|||++ .+...+.|+|||+|||+||-|
T Consensus 190 FGSatt~~~~~~----~~~e~----------~~----ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 190 FGSATTKILSPT----SAQEV----------NY----VEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred ccccccccCCCc----cHHHH----------HH----HHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 999854321111 00000 00 0001122468999999998 567789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 892 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
++...||.+.... .|+++.|.||..++.|...++|+
T Consensus 252 Cy~t~PFe~sg~l----aIlng~Y~~P~~p~ys~~l~~LI 287 (738)
T KOG1989|consen 252 CYFTTPFEESGKL----AILNGNYSFPPFPNYSDRLKDLI 287 (738)
T ss_pred HHhCCCcCcCcce----eEEeccccCCCCccHHHHHHHHH
Confidence 9999999765333 57899999999988888888875
No 108
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.66 Aligned_cols=197 Identities=26% Similarity=0.386 Sum_probs=172.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+|+.++||||++++++|......|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 445789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+|||++ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~- 235 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI- 235 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc-
Confidence 999999 67898888664 34899999999999999999999999999999999999999999999999998532110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
........+||+.|+|||++.+..++.++|||||||+||+|++|..||..
T Consensus 236 -------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 236 -------------------------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred -------------------------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 00112345799999999999999999999999999999999999988764
No 109
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-33 Score=308.66 Aligned_cols=214 Identities=26% Similarity=0.445 Sum_probs=179.7
Q ss_pred CCcccccccccCCcEEEEEEEEec-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCccceeEEEE-----
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 739 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~----- 739 (934)
++|++++.||+|+||.||+|.+.. +++.||+|.+...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999854 4789999998754322 22233455677777765 6999999999885
Q ss_pred eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
....+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 345789999999 5689999876655668999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43210 11234568999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHc
Q 002342 900 GKTRQKTFANILH 912 (934)
Q Consensus 900 ~~~~~~~~~~i~~ 912 (934)
+.+..+.+..|.+
T Consensus 211 ~~~~~~~~~~i~~ 223 (290)
T cd07862 211 GSSDVDQLGKILD 223 (290)
T ss_pred CCCHHHHHHHHHH
Confidence 9998888888865
No 110
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.6e-33 Score=308.02 Aligned_cols=221 Identities=45% Similarity=0.819 Sum_probs=196.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.||+|++.+...........+.+|+++++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999997654444455677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999765 45999999999999999999999999999999999999999999999999998543110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
....+|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.....+
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 223468999999999988888899999999999999999999999888888888
Q ss_pred HHHcCCCCCCCCC
Q 002342 909 NILHKDLKFPSST 921 (934)
Q Consensus 909 ~i~~~~~~~p~~~ 921 (934)
.+..+...+|...
T Consensus 209 ~~~~~~~~~~~~~ 221 (290)
T cd05580 209 KILEGKVRFPSFF 221 (290)
T ss_pred HHhcCCccCCccC
Confidence 8888888877653
No 111
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.1e-33 Score=315.51 Aligned_cols=211 Identities=22% Similarity=0.395 Sum_probs=176.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----CeE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~~~ 744 (934)
+|++.+.||+|+||.||++.+..++..||||.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987532 2233445678999999999999999999988543 358
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 67899888764 34999999999999999999999999999999999999999999999999998542111
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011234579999999999976 678889999999999999999999998877
Q ss_pred HHHHHH
Q 002342 903 RQKTFA 908 (934)
Q Consensus 903 ~~~~~~ 908 (934)
....+.
T Consensus 213 ~~~~~~ 218 (338)
T cd07859 213 VVHQLD 218 (338)
T ss_pred hHHHHH
Confidence 655443
No 112
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=307.04 Aligned_cols=221 Identities=18% Similarity=0.209 Sum_probs=185.5
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----CCeEEEEEEc
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 750 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~~~~~lV~E~ 750 (934)
..||+|+++.||++.+ +|+.||+|.+.+...........+.+|+.+|++++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5689999999999988 789999999987544444446778899999999999999999999876 4578999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|++|+|.+++... +.++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 4588999999999999999999985 9999999999999999999999999998543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+++
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 113368899999999976 67899999999999999999999999999988888
Q ss_pred HHHHcCCCCCCCCCCCCcccCC
Q 002342 908 ANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 908 ~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
..+..+...++.....+..+++
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~ 253 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKC 253 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHH
Confidence 8887665554433233444443
No 113
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=319.31 Aligned_cols=212 Identities=27% Similarity=0.418 Sum_probs=191.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|.-++.||.|+||-||.+++..+...||||.+.........++..+..|+..|+++.|||++.+.++|-.+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 47888999999999999999999999999999987666677888999999999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|| -|+-.+++... .+++.+-++..|+.+.+.||+|||+.+.||||||..|||++..|.|||+|||+|.++.
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 77777877654 3569999999999999999999999999999999999999999999999999986543
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
..++|+|||.|||||++. .+.|+-++||||||++..||.-.+||+...+....
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 346789999999999995 46889999999999999999999999998888877
Q ss_pred HHHHHcCC
Q 002342 907 FANILHKD 914 (934)
Q Consensus 907 ~~~i~~~~ 914 (934)
+.-|.+..
T Consensus 234 LYHIAQNe 241 (948)
T KOG0577|consen 234 LYHIAQNE 241 (948)
T ss_pred HHHHHhcC
Confidence 77775543
No 114
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.3e-33 Score=304.83 Aligned_cols=211 Identities=34% Similarity=0.602 Sum_probs=182.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|+..+.||.|+||+||++.+..+++.||+|.+.+...........+.+|+.+|+.++|+||+.+++++..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37788999999999999999999999999999876544334444567789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998886654456999999999999999999999999999999999999999999999999988432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~ 211 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE 211 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468999999999999999999999999999999999999998876654333
No 115
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-34 Score=311.45 Aligned_cols=226 Identities=25% Similarity=0.442 Sum_probs=184.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.++...|++++.||+||.+.||+|.. .+.+.||+|.+.. ...+.+.+..+.+|+..|.+| +|.+|++||+|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~-~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVL-LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHH-hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 45678899999999999999999998 4445666665443 234677889999999999999 69999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+||||||- ..+|..+|++.. ..++.-.+++|+.||+.|+.++|+.||||.||||.|+|+. .|.+||+|||+|..+..
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 99999987 889999997753 3355459999999999999999999999999999999998 78999999999976654
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-----------CCchhHHHHHHHHHHHHH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEML 892 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-----------~s~~~DiwSlG~iL~ell 892 (934)
+...+ ...+-+||+.||+||++.... .+.++|||||||+||+|+
T Consensus 512 DTTsI-------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 512 DTTSI-------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred cccce-------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 43322 223558999999999995533 456899999999999999
Q ss_pred hCCCCCCCCC-HHHHHHHHHcCC--CCCCCC
Q 002342 893 YGYTPFRGKT-RQKTFANILHKD--LKFPSS 920 (934)
Q Consensus 893 tG~~Pf~~~~-~~~~~~~i~~~~--~~~p~~ 920 (934)
+|++||..-. ....+..|..-. +.||..
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~ 597 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDI 597 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCC
Confidence 9999996533 445566665543 466654
No 116
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=301.28 Aligned_cols=209 Identities=27% Similarity=0.465 Sum_probs=188.5
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
-|.++.+||+|+||.||++.++.+|+.+|||.+... ..+.++..|+.|++++++|+||++|++|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999987643 466789999999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
||..|++.+.+..+ .+.+++.++..+++.-+.||+|||...-||||||..|||++-+|.+||+|||.|..+.
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT------- 180 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT------- 180 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh-------
Confidence 99999999998765 4679999999999999999999999999999999999999999999999999985432
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
+.....++.+|||.|||||++..-+|+.++||||||++..||.-|+|||.+-.+...+-+
T Consensus 181 --------------------DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 181 --------------------DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred --------------------hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 233455788999999999999999999999999999999999999999988877766555
Q ss_pred HH
Q 002342 910 IL 911 (934)
Q Consensus 910 i~ 911 (934)
|-
T Consensus 241 IP 242 (502)
T KOG0574|consen 241 IP 242 (502)
T ss_pred cc
Confidence 53
No 117
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.8e-33 Score=302.65 Aligned_cols=220 Identities=19% Similarity=0.258 Sum_probs=185.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
++..+|++.+.||+|+||.||++.+. ..+..||+|.++... .......+.+|+.+++.++||||+++++++...+
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 34568999999999999999999875 456789999987542 2344567889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999987643 458999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.. .........+++.|+|||.+.+..++.++|||||||++|++++ |.+||.+.
T Consensus 159 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SE--------------------------AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred cc--------------------------chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 00 0001112345678999999999999999999999999999875 99999999
Q ss_pred CHHHHHHHHHcCC
Q 002342 902 TRQKTFANILHKD 914 (934)
Q Consensus 902 ~~~~~~~~i~~~~ 914 (934)
+..+.++.+.++.
T Consensus 213 ~~~~~~~~~~~~~ 225 (266)
T cd05064 213 SGQDVIKAVEDGF 225 (266)
T ss_pred CHHHHHHHHHCCC
Confidence 9888888886653
No 118
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-32 Score=309.58 Aligned_cols=209 Identities=27% Similarity=0.452 Sum_probs=182.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||++++++|...+++|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 34679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+||||+.+++|.+++... +.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-
Confidence 999999999999999764 3489999999999999999999985 799999999999999999999999999843211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112346899999999999999999999999999999999999999876665
Q ss_pred HHH
Q 002342 905 KTF 907 (934)
Q Consensus 905 ~~~ 907 (934)
+..
T Consensus 209 ~~~ 211 (333)
T cd06650 209 ELE 211 (333)
T ss_pred HHH
Confidence 443
No 119
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.9e-33 Score=320.34 Aligned_cols=225 Identities=24% Similarity=0.374 Sum_probs=183.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~ 738 (934)
.+..++|++.+.||+|+||.||++.+...+ ..||+|.+.... .......+.+|+.+++.+ +||||+++++++
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 345668999999999999999999975443 579999987542 233456788999999999 899999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCC------------------------------------------------------
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (934)
...+.+|+|||||++|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999885421
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 765 --------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 765 --------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~----- 266 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS----- 266 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc-----
Confidence 1247888999999999999999999999999999999999999999999999985432100
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~ 909 (934)
.........+++.|||||++.+..++.++|||||||++|+|++ |+.||........+..
T Consensus 267 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~ 326 (374)
T cd05106 267 --------------------NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK 326 (374)
T ss_pred --------------------ceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence 0011122345678999999999999999999999999999997 9999988766555555
Q ss_pred HHcCCCC
Q 002342 910 ILHKDLK 916 (934)
Q Consensus 910 i~~~~~~ 916 (934)
+....+.
T Consensus 327 ~~~~~~~ 333 (374)
T cd05106 327 MVKRGYQ 333 (374)
T ss_pred HHHcccC
Confidence 5554443
No 120
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=318.80 Aligned_cols=216 Identities=28% Similarity=0.457 Sum_probs=191.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.|.|+..||.|+||+||++..+.++-..|-|++... ....++.+.-||.||..++||+||+|++.|..++.+||+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 5689999999999999999999999999999988643 5677888999999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||.||-....+..- ++.+++.++..+++|+|.||.|||+++|||||||..|||++-+|.++|+|||.+....
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch------
Confidence 999888877666543 4679999999999999999999999999999999999999999999999999984311
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+|+|||.|||||++.+ .+|++++||||||++|.+|.-+.||....+.
T Consensus 182 ---------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp 240 (1187)
T KOG0579|consen 182 ---------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP 240 (1187)
T ss_pred ---------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch
Confidence 11223457899999999999844 6899999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 002342 904 QKTFANILHKDL 915 (934)
Q Consensus 904 ~~~~~~i~~~~~ 915 (934)
..++-+|.....
T Consensus 241 MRVllKiaKSeP 252 (1187)
T KOG0579|consen 241 MRVLLKIAKSEP 252 (1187)
T ss_pred HHHHHHHhhcCC
Confidence 999988876543
No 121
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.8e-33 Score=333.56 Aligned_cols=230 Identities=27% Similarity=0.373 Sum_probs=184.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+++|++.+.||+|+||.||+|.+..+++.||+|++............++.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 36899999999999999999999999999999999765444445567788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 748 TDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
|||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999999999886421 123556778889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
............. .. ................+||+.|||||++.+..++.++|||||||++|+|++|.+||
T Consensus 161 k~i~~~~~~~~~l-------~~--~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 161 IFKKLEEEDLLDI-------DV--DERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred eeccccccccccc-------cc--ccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 6542111100000 00 00000011112234568999999999999999999999999999999999999999
Q ss_pred CCCCHHHH
Q 002342 899 RGKTRQKT 906 (934)
Q Consensus 899 ~~~~~~~~ 906 (934)
.......+
T Consensus 232 ~~~~~~ki 239 (932)
T PRK13184 232 RRKKGRKI 239 (932)
T ss_pred CCcchhhh
Confidence 87655433
No 122
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.7e-33 Score=314.44 Aligned_cols=208 Identities=26% Similarity=0.462 Sum_probs=176.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
.++|++.+.||+|+||.||++.+..++..||+|.+.+.. ........+.+|+.+++.++||||++++++|...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 579999999999999999999999999999999987542 23344567788999999999999999999986543
Q ss_pred -eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
.+|+||||+. ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 5799999995 567666543 3889999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 174 ~~----------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CT----------------------------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cc----------------------------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 11 01122347899999999999999999999999999999999999999987
Q ss_pred CHHHHHHH
Q 002342 902 TRQKTFAN 909 (934)
Q Consensus 902 ~~~~~~~~ 909 (934)
+....+..
T Consensus 226 ~~~~~~~~ 233 (359)
T cd07876 226 DHIDQWNK 233 (359)
T ss_pred CHHHHHHH
Confidence 76554433
No 123
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.9e-33 Score=312.69 Aligned_cols=201 Identities=29% Similarity=0.455 Sum_probs=170.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||.||++.+..+++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence 44678999999999999999999999999999999986532 3344567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+|||||++++|.... ...+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 149 lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~- 221 (353)
T PLN00034 149 VLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT- 221 (353)
T ss_pred EEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-
Confidence 999999999986532 3567888899999999999999999999999999999999999999999998543210
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.......+||+.|+|||++.. ...+.++|||||||++|+|++|+.||..
T Consensus 222 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 222 --------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred --------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 011234579999999999843 3345689999999999999999999974
Q ss_pred C
Q 002342 901 K 901 (934)
Q Consensus 901 ~ 901 (934)
.
T Consensus 276 ~ 276 (353)
T PLN00034 276 G 276 (353)
T ss_pred C
Confidence 3
No 124
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.4e-33 Score=321.79 Aligned_cols=209 Identities=25% Similarity=0.403 Sum_probs=173.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
..+|++.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+|+.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 468999999999999999999999999999999876431 2234699999999999999999887532
Q ss_pred --CeEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecc
Q 002342 742 --THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFD 816 (934)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG 816 (934)
.++++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25779999995 577776643 2235699999999999999999999999999999999999998664 79999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCC
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~ 895 (934)
+|+.... .......+||+.|||||++.+. .++.++|||||||+||+|++|.
T Consensus 217 la~~~~~----------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 217 SAKNLLA----------------------------GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred cchhccC----------------------------CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9954321 0112245789999999998764 6899999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002342 896 TPFRGKTRQKTFANILH 912 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~ 912 (934)
+||.+.+..+.+.++.+
T Consensus 269 ~pf~~~~~~~~~~~i~~ 285 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQ 285 (440)
T ss_pred CCCCCCChHHHHHHHHH
Confidence 99999888877776654
No 125
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7.9e-33 Score=303.50 Aligned_cols=205 Identities=36% Similarity=0.636 Sum_probs=179.3
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++++...+..|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37888999999999999999999999999999876544444445567789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999886654456999999999999999999999999999999999999999999999999988432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.......|++.|+|||++.+..++.++|+|||||++|+|++|++||.+..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~ 205 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 01123468999999999999999999999999999999999999998754
No 126
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-34 Score=320.01 Aligned_cols=213 Identities=33% Similarity=0.467 Sum_probs=178.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------Ce
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------TH 743 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------~~ 743 (934)
-|..-+.||.|+||.||+++++.+|+.||||.+++.. .....+...+|++||++|+|||||+++++-++. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4556678999999999999999999999999998643 344567788999999999999999999986643 35
Q ss_pred EEEEEEccCCCCchhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCc--EEEEecccC
Q 002342 744 VCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGH--VSLTDFDLS 818 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~--~~~--vkl~DFG~a 818 (934)
..+|||||.||+|+..+.+- ....+++.++..++..+..||.|||++||+||||||.||++-. +|+ -||+|||+|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999752 2345999999999999999999999999999999999999953 343 599999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+.... +....+++||+.|++||++.. +.|+.-+|.|||||++|+++||..|
T Consensus 172 rel~d----------------------------~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDD----------------------------NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCC----------------------------CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 76432 224568899999999999985 8889999999999999999999999
Q ss_pred CCCCCH----HHHHHHHHc
Q 002342 898 FRGKTR----QKTFANILH 912 (934)
Q Consensus 898 f~~~~~----~~~~~~i~~ 912 (934)
|..... .++...+..
T Consensus 224 F~p~~~pk~~~~~~~~~~t 242 (732)
T KOG4250|consen 224 FIPFGGPKNNKEIMWHIIT 242 (732)
T ss_pred CCcCCCccccchhhhhhhc
Confidence 975333 345555554
No 127
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.4e-33 Score=314.79 Aligned_cols=213 Identities=27% Similarity=0.418 Sum_probs=180.3
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----eE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-----~~ 744 (934)
+|++.+.||+|+||.||++.+..+++.||+|.+... .........+.+|+.+|+.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 488999999999999999999999999999988653 223345567889999999999999999999998776 88
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999999 56888877653 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. ........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 E--------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred c--------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 0 0111234689999999999874 478899999999999999999999999888
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+.+..|.+
T Consensus 211 ~~~~~~i~~ 219 (372)
T cd07853 211 IQQLDLITD 219 (372)
T ss_pred HHHHHHHHH
Confidence 777666643
No 128
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1e-32 Score=297.01 Aligned_cols=218 Identities=27% Similarity=0.495 Sum_probs=190.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+.+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999986432 23455678889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655567899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........|++.|+|||++.+..++.++|+||||+++|+|++|.+||...+....+..
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 1112245689999999999998899999999999999999999999999888888888
Q ss_pred HHcCCCC
Q 002342 910 ILHKDLK 916 (934)
Q Consensus 910 i~~~~~~ 916 (934)
+..+.+.
T Consensus 212 ~~~~~~~ 218 (255)
T cd08219 212 VCQGSYK 218 (255)
T ss_pred HhcCCCC
Confidence 8776653
No 129
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-32 Score=312.80 Aligned_cols=211 Identities=25% Similarity=0.459 Sum_probs=180.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++.+.||+|+||.||++.+..+++.||||.+.+.. ........+.+|+.+++.++||||+.+++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 579999999999999999999999999999999987542 2334456778899999999999999999988643
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|+||||+ +++|...+.. .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCC-CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 3579999999 5577777643 3888999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 110 1122457899999999999999999999999999999999999999998
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+..+.+..++.
T Consensus 229 ~~~~~~~~~~~ 239 (364)
T cd07875 229 DHIDQWNKVIE 239 (364)
T ss_pred CHHHHHHHHHH
Confidence 88877777654
No 130
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.5e-33 Score=316.15 Aligned_cols=223 Identities=22% Similarity=0.350 Sum_probs=181.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~ 738 (934)
.+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.+|+.+ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34556899999999999999999975 3457789999987532 233446788999999999 899999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCC------------------------------------------------------
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (934)
...+..|+|||||++|+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999886432
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 765 -------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 765 -------------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 1247788899999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
. ........+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+....
T Consensus 269 ~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~ 323 (375)
T cd05104 269 N-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD 323 (375)
T ss_pred c-------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch
Confidence 0 001122345678999999999999999999999999999997 99999887655
Q ss_pred HHHHHHHcCC
Q 002342 905 KTFANILHKD 914 (934)
Q Consensus 905 ~~~~~i~~~~ 914 (934)
..+.+++...
T Consensus 324 ~~~~~~~~~~ 333 (375)
T cd05104 324 SKFYKMIKEG 333 (375)
T ss_pred HHHHHHHHhC
Confidence 4444444433
No 131
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=322.99 Aligned_cols=215 Identities=22% Similarity=0.370 Sum_probs=177.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCccceeEEEEe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~Iv~l~~~~~~ 740 (934)
..++|++++.||+|+||+||+|.+..+++.||||+++.. .........|+.+++.+.| ++++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 357899999999999999999999999999999998642 1223445667777777654 458889998876
Q ss_pred C-CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC----------
Q 002342 741 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 808 (934)
Q Consensus 741 ~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~---------- 808 (934)
+ .++|+||+++ |++|.+++.+. ..+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999999 88999888764 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 809 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 809 ------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
.+||+|||.+.... ......+||+.|||||++.+..|+.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999873211 112356899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 883 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 883 SlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
||||+||||++|++||.+.+..+.+..|......+|
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p 365 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP 365 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence 999999999999999999888777776655333333
No 132
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=312.53 Aligned_cols=212 Identities=27% Similarity=0.488 Sum_probs=181.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
++..+...-+..||+|+-|-||+++. .++.||||.++. .-..+|+.|+.|+||||+.|.+++....++
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCcee
Confidence 34444455567899999999999998 677999996542 233588999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||||||..|.|+.+|+.. +.+.......|..+|+.||.|||.+.|||||||.-||||+.+..|||+|||-++.....
T Consensus 188 CIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred EEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 9999999999999999874 55888999999999999999999999999999999999999999999999988654321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
....+|+||..|||||++...+.+.++|||||||+||||+||..||..-+..
T Consensus 266 ----------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss 317 (904)
T KOG4721|consen 266 ----------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS 317 (904)
T ss_pred ----------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh
Confidence 2335789999999999999999999999999999999999999999987777
Q ss_pred HHHHHHHcCCCCCC
Q 002342 905 KTFANILHKDLKFP 918 (934)
Q Consensus 905 ~~~~~i~~~~~~~p 918 (934)
.+++-+=..-+.+|
T Consensus 318 AIIwGVGsNsL~Lp 331 (904)
T KOG4721|consen 318 AIIWGVGSNSLHLP 331 (904)
T ss_pred eeEEeccCCccccc
Confidence 77766544444333
No 133
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-32 Score=302.28 Aligned_cols=213 Identities=29% Similarity=0.474 Sum_probs=177.5
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCccceeEEEEe-----C
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 741 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~~-----~ 741 (934)
+|++.+.||+|+||.||++.++.+++.||+|.+..... .........+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN-EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC-CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 58999999999999999999999999999999875422 122223455677776655 79999999998864 3
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..++++|||+. ++|.+++.......+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999995 58988887655556999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 210 1112346899999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
...+.+.++..
T Consensus 211 ~~~~~~~~~~~ 221 (288)
T cd07863 211 SEADQLGKIFD 221 (288)
T ss_pred CHHHHHHHHHH
Confidence 88777766654
No 134
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-32 Score=304.14 Aligned_cols=217 Identities=25% Similarity=0.371 Sum_probs=179.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEec----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~ 730 (934)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+|..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 34689999999999999999998632 34579999987542 3445567889999999999999
Q ss_pred ccceeEEEEeCCeEEEEEEccCCCCchhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 002342 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGII 793 (934)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------~~~l~~~~~~~i~~qil~aL~yLH~~gii 793 (934)
|+++++++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999885431 12467788999999999999999999999
Q ss_pred ecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC
Q 002342 794 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (934)
Q Consensus 794 HrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~ 873 (934)
||||||+|||++.++.+||+|||++...... ..........+++.|||||++.+.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~-------------------------~~~~~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAG-------------------------DYYRIQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccC-------------------------ceeEecCcCCCCccccCHHHHhcC
Confidence 9999999999999999999999998543110 001112334568899999999988
Q ss_pred CCCchhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHH
Q 002342 874 GHTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANI 910 (934)
Q Consensus 874 ~~s~~~DiwSlG~iL~ellt--G~~Pf~~~~~~~~~~~i 910 (934)
.++.++|||||||++|+|++ |..||.+.+..+.+..+
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~ 254 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA 254 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence 99999999999999999986 67899887777666544
No 135
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=333.18 Aligned_cols=224 Identities=25% Similarity=0.438 Sum_probs=182.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~ 743 (934)
...++|++++.||.|+||.||+|.+..++..||+|++..... .......+..|+.+|+.|+||||++++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 446799999999999999999999999999999999876433 33445678899999999999999999999864 457
Q ss_pred EEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEEEecC-------
Q 002342 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQGN------- 807 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~-------giiHrDLKp~NILl~~~------- 807 (934)
+|||||||++++|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999998653 224599999999999999999999984 49999999999999642
Q ss_pred ----------CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCC
Q 002342 808 ----------GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 875 (934)
Q Consensus 808 ----------~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~ 875 (934)
+.+||+|||++...... ......+||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCCC
Confidence 34899999998543210 11234579999999999964 457
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 876 s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
+.++|||||||+||+|++|.+||........+..++.....+|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp 263 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP 263 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC
Confidence 8899999999999999999999987666555444444444444
No 136
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.8e-32 Score=304.29 Aligned_cols=213 Identities=23% Similarity=0.392 Sum_probs=179.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+.+.||+|+||.||++.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 5689999999999999999999999999999999875422 22234567899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+. ++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 83 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 157 (309)
T cd07872 83 FEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP--- 157 (309)
T ss_pred EeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC---
Confidence 99995 5888887654 245899999999999999999999999999999999999999999999999998542111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 158 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 213 (309)
T cd07872 158 ------------------------TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213 (309)
T ss_pred ------------------------ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 011123467899999999865 4678899999999999999999999998887766
Q ss_pred HHHHH
Q 002342 907 FANIL 911 (934)
Q Consensus 907 ~~~i~ 911 (934)
+..+.
T Consensus 214 ~~~~~ 218 (309)
T cd07872 214 LHLIF 218 (309)
T ss_pred HHHHH
Confidence 65554
No 137
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-32 Score=293.92 Aligned_cols=218 Identities=29% Similarity=0.487 Sum_probs=191.4
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 48889999999999999999999999999999875433 34455678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~----- 154 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN----- 154 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-----
Confidence 999999999998754567999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......
T Consensus 155 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 155 ----------------------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred ----------------------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112244688999999999999899999999999999999999999999888888888
Q ss_pred HHcCCC
Q 002342 910 ILHKDL 915 (934)
Q Consensus 910 i~~~~~ 915 (934)
+..+.+
T Consensus 213 ~~~~~~ 218 (256)
T cd08529 213 IIRGVF 218 (256)
T ss_pred HHcCCC
Confidence 877654
No 138
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=314.37 Aligned_cols=229 Identities=24% Similarity=0.362 Sum_probs=197.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCe---E-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~-vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (934)
..|++..++-.+.++||+|+||.||++..+..+. . ||+|..+...........++.+|.++|++++|||||++||+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 4566777778888999999999999999876432 3 89999876444567888999999999999999999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
...+..+++|||+|.||+|.+++++.+. .++..+...++.+.+.||+|||++++|||||..+|+|++.++.+||+|||+
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccc
Confidence 9999999999999999999999998753 699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccc-cccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GY 895 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~ 895 (934)
|..... ..... ...-...|+|||.+....|++++|||||||++||+++ |.
T Consensus 309 s~~~~~----------------------------~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 309 SRAGSQ----------------------------YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred ccCCcc----------------------------eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence 854310 00001 1124578999999999999999999999999999997 89
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCC
Q 002342 896 TPFRGKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~p~ 919 (934)
.||.+....++..+|....+..|.
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~ 384 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPI 384 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCC
Confidence 999999999999999766654444
No 139
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.3e-32 Score=295.91 Aligned_cols=218 Identities=23% Similarity=0.333 Sum_probs=187.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+...+|.+.+.||+|+||.||++.+..++..||+|.+.+. ......+.+|+.+++.++||||+++++++..++.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4556799999999999999999999999999999998653 233467888999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
++|||+++++|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 159 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 --------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred --------------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 001112234678999999999999999999999999999998 99999998888
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+....+..+
T Consensus 213 ~~~~~~~~~ 221 (263)
T cd05052 213 QVYELLEKG 221 (263)
T ss_pred HHHHHHHCC
Confidence 887777654
No 140
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-32 Score=296.56 Aligned_cols=223 Identities=24% Similarity=0.399 Sum_probs=188.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|+++++||+|+||.||++.+ .++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 35667999999999999999999986 456679999876532 2346788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|++|||+++++|.+++.......++...+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999997765566899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ........++..|+|||++.+..++.++|+|||||++|+|++ |..||.+...
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 E--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred c--------------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 0 001122346778999999998889999999999999999998 9999999888
Q ss_pred HHHHHHHHcCCCCCCC
Q 002342 904 QKTFANILHKDLKFPS 919 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~ 919 (934)
......+..+ ..+|.
T Consensus 211 ~~~~~~~~~~-~~~~~ 225 (261)
T cd05072 211 SDVMSALQRG-YRMPR 225 (261)
T ss_pred HHHHHHHHcC-CCCCC
Confidence 8888777654 33443
No 141
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=317.45 Aligned_cols=222 Identities=27% Similarity=0.419 Sum_probs=184.6
Q ss_pred ccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCC
Q 002342 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 755 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggs 755 (934)
+||+|.||+||-++|..+...+|||.+... +......+..|+.+.+.|+|.|||++++++..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 589999999999999999999999988643 45566778899999999999999999999999999999999999999
Q ss_pred chhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 756 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 756 L~~~l~~~~~~~l--~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
|.+++.... +++ ++..+-+|.+||++||.|||.+.|||||||-+|||++ ..|.+||.|||-++....
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--------- 728 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--------- 728 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc---------
Confidence 999998764 345 8899999999999999999999999999999999996 579999999998865421
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH--HHH
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK--TFA 908 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~--~~~ 908 (934)
-+.-+.++.||+.|||||++..+ +|+.++|||||||++.||.||+|||.....++ +++
T Consensus 729 ------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk 790 (1226)
T KOG4279|consen 729 ------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK 790 (1226)
T ss_pred ------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh
Confidence 12345688999999999999764 67889999999999999999999998544432 222
Q ss_pred H-HHcCCCCCCCCCCCCcccCCC
Q 002342 909 N-ILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 909 ~-i~~~~~~~p~~~~~s~~~k~l 930 (934)
- +.+...++|.. .|.++|+|
T Consensus 791 VGmyKvHP~iPee--lsaeak~F 811 (1226)
T KOG4279|consen 791 VGMYKVHPPIPEE--LSAEAKNF 811 (1226)
T ss_pred hcceecCCCCcHH--HHHHHHHH
Confidence 1 12334455554 35555554
No 142
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3e-32 Score=301.84 Aligned_cols=238 Identities=40% Similarity=0.703 Sum_probs=197.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++++..++++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999988754434455667889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985421110000
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
... ... .............|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+..+.+.
T Consensus 159 ~~~---------~~~---~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYE---------GHI---EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred ccc---------ccc---ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 000 000 00000111223568899999999998889999999999999999999999999999888898
Q ss_pred HHHcCCCCCCCC
Q 002342 909 NILHKDLKFPSS 920 (934)
Q Consensus 909 ~i~~~~~~~p~~ 920 (934)
.+..+...+|..
T Consensus 227 ~~~~~~~~~~~~ 238 (305)
T cd05609 227 QVISDDIEWPEG 238 (305)
T ss_pred HHHhcccCCCCc
Confidence 888887777764
No 143
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-32 Score=310.52 Aligned_cols=211 Identities=25% Similarity=0.449 Sum_probs=178.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----- 741 (934)
..++|++.+.||+|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3579999999999999999999999999999999987542 2334456778899999999999999999998643
Q ss_pred -CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 742 -~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
...|+||||++ ++|...+.. .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999994 567776643 388999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 169 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred CCCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2110 112235789999999999999999999999999999999999999998
Q ss_pred CCHHHHHHHHH
Q 002342 901 KTRQKTFANIL 911 (934)
Q Consensus 901 ~~~~~~~~~i~ 911 (934)
.+..+.+..+.
T Consensus 221 ~~~~~~~~~~~ 231 (355)
T cd07874 221 RDYIDQWNKVI 231 (355)
T ss_pred CCHHHHHHHHH
Confidence 87766554443
No 144
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.4e-32 Score=297.57 Aligned_cols=222 Identities=25% Similarity=0.407 Sum_probs=188.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..++|++++.||+|+||.||++.+...+ ..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 4568999999999999999999986655 789999886432 344556788999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~ 807 (934)
...|++|||+++++|.+++..... ..++...+..++.|++.||.|||++|++|+||||+||+++.+
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 999999999999999999875421 458889999999999999999999999999999999999999
Q ss_pred CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHH
Q 002342 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (934)
Q Consensus 808 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~i 887 (934)
+.++|+|||++....... .........+++.|+|||.+.+..++.++|||||||+
T Consensus 161 ~~~~L~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i 215 (283)
T cd05048 161 LTVKISDFGLSRDIYSAD-------------------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV 215 (283)
T ss_pred CcEEECCCcceeeccccc-------------------------cccccCCCcccccccCHHHhccCcCchhhhHHHHHHH
Confidence 999999999985432110 0111223457889999999998899999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 888 LYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 888 L~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
+|+|++ |..||.+.+..+....|..+..
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~ 244 (283)
T cd05048 216 LWEIFSYGLQPYYGFSNQEVIEMIRSRQL 244 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 999997 9999999999888888876653
No 145
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.5e-32 Score=293.91 Aligned_cols=220 Identities=26% Similarity=0.398 Sum_probs=186.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+.|.+.+.||+|++|.||++.+..+++.||+|.+...... .......+.+|+.+++.++||||+++++++..+..+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4699999999999999999999999999999998754322 12334578889999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999998764 4589999999999999999999999999999999999999999999999999854321000
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.........|+..|+|||++.+..++.++||||||+++|+|++|++||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00111234688999999999998899999999999999999999999988777766
Q ss_pred HHHHHcCC
Q 002342 907 FANILHKD 914 (934)
Q Consensus 907 ~~~i~~~~ 914 (934)
+.++....
T Consensus 216 ~~~~~~~~ 223 (263)
T cd06625 216 IFKIATQP 223 (263)
T ss_pred HHHHhccC
Confidence 66665543
No 146
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.3e-32 Score=311.84 Aligned_cols=226 Identities=25% Similarity=0.324 Sum_probs=182.4
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYA 736 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~ 736 (934)
.+....++|++.+.||+|+||.||++.+... +..||||++.+.. .......+.+|+++|+.+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 3445678999999999999999999987433 3579999987542 2334467889999999996 999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCC----------------------------------------------------
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 764 (934)
++...+.+|||||||++|+|.+++..+.
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999998875421
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 765 ------------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 765 ------------------------------------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 12478888899999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 999999999999999854321100 0112234578899999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
||||++|+|++ |..||.+......+........
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~ 357 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGY 357 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCC
Confidence 99999999996 9999987655444433333333
No 147
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-32 Score=308.30 Aligned_cols=210 Identities=28% Similarity=0.451 Sum_probs=178.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++++.||.|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+|+.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 478999999999999999999999999999999987542 1223345677899999999999999999988643
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...|++|+++ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999998 8899888754 34999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 11 1123478999999999977 5688899999999999999999999998
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+.+..+..
T Consensus 219 ~~~~~~~~~~~~ 230 (343)
T cd07878 219 NDYIDQLKRIME 230 (343)
T ss_pred CCHHHHHHHHHH
Confidence 877766666543
No 148
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.9e-32 Score=296.47 Aligned_cols=225 Identities=21% Similarity=0.295 Sum_probs=189.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..++|.+.+.||.|+||.||++.+.. ++..||+|.+.... .......+.+|+++|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35689999999999999999998753 36789999987542 233456788999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002342 742 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~ 809 (934)
...|+||||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999986532 234788999999999999999999999999999999999999999
Q ss_pred EEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 810 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
++|+|||++....... .........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCc-------------------------ceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 9999999985321100 001112334678999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
+|++ |..||.+.+..+....+.++.+..+
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 245 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR 245 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 9998 9999999888888888887766444
No 149
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.3e-32 Score=296.17 Aligned_cols=221 Identities=22% Similarity=0.336 Sum_probs=187.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+.++|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 4568999999999999999999862 35667999988653 344566788999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002342 742 THVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~v 810 (934)
+..|+||||+++++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999999999986432 1248999999999999999999999999999999999999999999
Q ss_pred EEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHH
Q 002342 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (934)
Q Consensus 811 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~e 890 (934)
+|+|||++....... .........+++.|+|||++.+..++.++|+|||||++|+
T Consensus 160 kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~ 214 (288)
T cd05093 160 KIGDFGMSRDVYSTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 214 (288)
T ss_pred EeccCCccccccCCc-------------------------eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 999999985432110 0011123346788999999999999999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 891 MLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 891 llt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
|++ |.+||.+.+..+.+..+..+.+
T Consensus 215 l~t~g~~p~~~~~~~~~~~~i~~~~~ 240 (288)
T cd05093 215 IFTYGKQPWYQLSNNEVIECITQGRV 240 (288)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 998 9999999888888888887764
No 150
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.9e-32 Score=293.36 Aligned_cols=214 Identities=26% Similarity=0.344 Sum_probs=186.6
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|++++.||.|+||.||++.+.. +..+|+|.+... .......+..|+.+++.++||||+++++++......|+||
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 579999999999999999999977 889999998754 2333456888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.......++...++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~--- 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV--- 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---
Confidence 99999999999987666679999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~ 907 (934)
.......+++.|+|||++.+..++.++|+||||+++|+|++ |+.||.+.+..+++
T Consensus 159 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~ 214 (261)
T cd05148 159 ------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY 214 (261)
T ss_pred ------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 01112345778999999998899999999999999999998 99999998888888
Q ss_pred HHHHcC
Q 002342 908 ANILHK 913 (934)
Q Consensus 908 ~~i~~~ 913 (934)
..+..+
T Consensus 215 ~~~~~~ 220 (261)
T cd05148 215 DQITAG 220 (261)
T ss_pred HHHHhC
Confidence 887754
No 151
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-31 Score=288.28 Aligned_cols=218 Identities=27% Similarity=0.469 Sum_probs=188.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-CCeEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 748 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lV~ 748 (934)
+|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|||++++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875422 33445668889999999999999999998864 45689999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~---- 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ---- 155 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc----
Confidence 9999999999987654556899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+......
T Consensus 156 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 156 -----------------------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred -----------------------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 011234568999999999999999999999999999999999999999888877777
Q ss_pred HHHcCCC
Q 002342 909 NILHKDL 915 (934)
Q Consensus 909 ~i~~~~~ 915 (934)
.+..+.+
T Consensus 213 ~~~~~~~ 219 (257)
T cd08223 213 RIIEGKL 219 (257)
T ss_pred HHHhcCC
Confidence 7777665
No 152
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.6e-32 Score=292.69 Aligned_cols=219 Identities=26% Similarity=0.446 Sum_probs=184.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||.|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 46899999999999999999999999999999998754 223345677899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... +.+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 35999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
........|++.|+|||++. ...++.++|+|||||++|+|++|.+||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 01123446899999999984 456788999999999999999999999776655
Q ss_pred HHHHHHHcCCCCCC
Q 002342 905 KTFANILHKDLKFP 918 (934)
Q Consensus 905 ~~~~~i~~~~~~~p 918 (934)
.....+....+..|
T Consensus 216 ~~~~~~~~~~~~~~ 229 (267)
T cd06645 216 RALFLMTKSNFQPP 229 (267)
T ss_pred hhHHhhhccCCCCC
Confidence 55545544444433
No 153
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-34 Score=284.32 Aligned_cols=245 Identities=24% Similarity=0.310 Sum_probs=196.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT---- 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~---- 740 (934)
.++.++|++.+.||+|||+.||+|+...++..||+|.+... ..+..+...+|++..++++||||++++++...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 36778999999999999999999999999999999998765 35667788999999999999999999887643
Q ss_pred -CCeEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEEec
Q 002342 741 -KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vkl~DF 815 (934)
....||++.|+..|+|.+.+... ++..+++.++..|+.+|++||++||... +.||||||.|||+++++.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 34589999999999999998753 3446999999999999999999999998 999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC---CCCchhHHHHHHHHHHHHH
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEML 892 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~s~~~DiwSlG~iL~ell 892 (934)
|++......-.. ...............|+.|.|||.+.-. ..+.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~~------------------~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIEG------------------SRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEeec------------------hHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 998653211000 0001111222334579999999999654 4467999999999999999
Q ss_pred hCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 893 YGYTPFRGK--TRQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 893 tG~~Pf~~~--~~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
+|.-||.-. ....+.-.+.++++.||...+.|....+|
T Consensus 236 f~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~l 275 (302)
T KOG2345|consen 236 FGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQL 275 (302)
T ss_pred HcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHH
Confidence 999999632 22233446678899999888777665544
No 154
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.5e-32 Score=292.63 Aligned_cols=217 Identities=28% Similarity=0.419 Sum_probs=184.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++++..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 58999999999999999999999999999999887644445555667889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~-- 159 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-- 159 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch--
Confidence 999999999887532 2245899999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--H
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~--~ 904 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .
T Consensus 160 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 160 -------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred -------------------------hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 0011234688999999999988899999999999999999999999975432 3
Q ss_pred HHHHHHHc
Q 002342 905 KTFANILH 912 (934)
Q Consensus 905 ~~~~~i~~ 912 (934)
.....+..
T Consensus 215 ~~~~~~~~ 222 (267)
T cd08228 215 SLCQKIEQ 222 (267)
T ss_pred HHHHHHhc
Confidence 45555544
No 155
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.5e-32 Score=293.99 Aligned_cols=218 Identities=25% Similarity=0.409 Sum_probs=182.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987532 23345677899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999988654 35899999999999999999999999999999999999999999999999998543110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
........|++.|+|||.+. ...++.++|+|||||++|+|++|.+||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 01122346889999999984 345778999999999999999999999766655
Q ss_pred HHHHHHHcCCCCC
Q 002342 905 KTFANILHKDLKF 917 (934)
Q Consensus 905 ~~~~~i~~~~~~~ 917 (934)
+....+....+..
T Consensus 216 ~~~~~~~~~~~~~ 228 (267)
T cd06646 216 RALFLMSKSNFQP 228 (267)
T ss_pred hhheeeecCCCCC
Confidence 5544444444443
No 156
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.9e-32 Score=289.30 Aligned_cols=219 Identities=28% Similarity=0.495 Sum_probs=192.5
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++++.||.|+||.||.+++..++..+++|.+..... .......+.+|+.++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875432 23445678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987645568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+....
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012345689999999999988889999999999999999999999999888888888
Q ss_pred HHcCCCC
Q 002342 910 ILHKDLK 916 (934)
Q Consensus 910 i~~~~~~ 916 (934)
+..+.+.
T Consensus 213 ~~~~~~~ 219 (256)
T cd08221 213 IVQGNYT 219 (256)
T ss_pred HHcCCCC
Confidence 8877654
No 157
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-32 Score=305.98 Aligned_cols=203 Identities=27% Similarity=0.348 Sum_probs=173.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-eEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-~~~l 746 (934)
.++|.-...||+|+||.||++... ++..||||.+....... ..++.+|+.+|.+++|||+|+|++||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 467888899999999999999884 44899999876542211 455999999999999999999999999888 5999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g---iiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
|+|||++|+|.+++.......+++.....|+.+++.||+|||... ||||||||+|||+|.++.+||+|||+|+..+.
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998764326899999999999999999999863 99999999999999999999999999954321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccc-cCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
. . ....+. .||.+|+|||++..+..+.++||||||++|+||++|+.|....
T Consensus 230 ~-~--------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 230 G-D--------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred c-c--------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 0 0 000111 6999999999999999999999999999999999999888753
No 158
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.1e-32 Score=291.55 Aligned_cols=217 Identities=26% Similarity=0.361 Sum_probs=184.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.+.||+|++|.||++.+. +++.||+|.+..... ....+.+|+.+++.++||||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 45678999999999999999999874 457899999875422 2456788999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
++|||+++++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999977654568999999999999999999999999999999999999999999999999986542100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
........++..|+|||++.+..++.++|+||||+++|+|++ |+.||.+.+..
T Consensus 158 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 --------------------------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred --------------------------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 000111223568999999999889999999999999999998 99999998888
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
..+..+..+
T Consensus 212 ~~~~~~~~~ 220 (261)
T cd05068 212 EVLQQVDQG 220 (261)
T ss_pred HHHHHHHcC
Confidence 888777654
No 159
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.7e-32 Score=301.23 Aligned_cols=224 Identities=25% Similarity=0.356 Sum_probs=182.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+...+|++.+.||+|+||.||++.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 345689999999999999999999876665 4899988643 2334456788999999999999999999998764
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..++++||+++|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999987643 35889999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCc-------------------------ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 21100 001112235678999999999999999999999999999997 9999988
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~ 919 (934)
....++.. +......+|.
T Consensus 215 ~~~~~~~~-~~~~~~~~~~ 232 (316)
T cd05108 215 IPASEISS-ILEKGERLPQ 232 (316)
T ss_pred CCHHHHHH-HHhCCCCCCC
Confidence 77766554 4444444443
No 160
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=7.8e-32 Score=294.99 Aligned_cols=221 Identities=22% Similarity=0.362 Sum_probs=184.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
..++|++.+.||+|+||.||++.+. .++..+|+|.+... ........+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4568999999999999999999863 35678999998753 23445567889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 002342 743 HVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~ 807 (934)
..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999985321 1247888999999999999999999999999999999999999
Q ss_pred CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHH
Q 002342 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (934)
Q Consensus 808 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~i 887 (934)
+.+||+|||++....... .........++..|+|||++.+..++.++|+|||||+
T Consensus 161 ~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 161 LHVKISDLGLSREIYSAD-------------------------YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CcEEeccccccccccCCc-------------------------ceecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 999999999985432110 0011233446788999999998889999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 888 LYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 888 L~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
+|+|++ |.+||.+.+...+...+..+.
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~~ 243 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQ 243 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 999998 999999888877777776544
No 161
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.98 E-value=5.5e-32 Score=299.57 Aligned_cols=218 Identities=24% Similarity=0.366 Sum_probs=182.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeE--EEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~ 742 (934)
+..++|++.+.||+|+||.||+|.+..++.. +|+|.+... ........+.+|+.++..+ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 3456899999999999999999999877754 577765532 2344556788899999999 8999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
..|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999986532 23588999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccch----------------------------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 999999998842100 0001112346789999999888899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|+|++ |.+||.+.+..+.+..+..+
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC
Confidence 99998 99999988888888777554
No 162
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=5.4e-33 Score=280.31 Aligned_cols=229 Identities=28% Similarity=0.434 Sum_probs=189.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
+.++.+.+..||+|+.|+|++++.+.+|...|||.+.+. .+....+++...+.++... ++|+||+.++||..+..++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 456677889999999999999999999999999999864 3566677888888887666 5999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+.||.| +..+..++++. .+.+++..+-.+...++.||.||-.+ ||||||+||+|||++..|++||||||++..+.++
T Consensus 168 IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence 999999 54555555443 46699999999999999999999987 8999999999999999999999999999654322
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCC-
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRG- 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~- 900 (934)
...+...|.+.|||||.+. ...|+.++||||||++|+||+||+.||.+
T Consensus 246 ----------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 246 ----------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred ----------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 2233446999999999995 45788899999999999999999999997
Q ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCccc
Q 002342 901 KTRQKTFANILHKDL-KFPSSTPSSCKA 927 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~-~~p~~~~~s~~~ 927 (934)
.+..+++.+|++... .+|.....|+..
T Consensus 298 ~tdFe~ltkvln~ePP~L~~~~gFSp~F 325 (391)
T KOG0983|consen 298 KTDFEVLTKVLNEEPPLLPGHMGFSPDF 325 (391)
T ss_pred CccHHHHHHHHhcCCCCCCcccCcCHHH
Confidence 667799999988544 333333344443
No 163
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.98 E-value=1.2e-31 Score=288.99 Aligned_cols=217 Identities=25% Similarity=0.395 Sum_probs=183.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+.++|++.+.||+|+||.||++... ++..+|+|.+.+... ....+.+|+.+|+.++||||+++++++...+..|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 3467999999999999999999874 456799998765321 23567889999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-
Confidence 999999999999987543 358999999999999999999999999999999999999999999999999885431100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~ 905 (934)
........++..|+|||++.+..++.++|+||||+++|+|++ |++||...+..+
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 155 -------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred -------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 001112245678999999998889999999999999999999 999999999999
Q ss_pred HHHHHHcCCC
Q 002342 906 TFANILHKDL 915 (934)
Q Consensus 906 ~~~~i~~~~~ 915 (934)
.+..+.++..
T Consensus 210 ~~~~i~~~~~ 219 (256)
T cd05114 210 VVEMISRGFR 219 (256)
T ss_pred HHHHHHCCCC
Confidence 9888887653
No 164
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.98 E-value=9e-32 Score=294.01 Aligned_cols=195 Identities=29% Similarity=0.472 Sum_probs=172.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||++.+..+++.||+|.+.+.. .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36899999999999999999999999999999987542 2344567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|..+. .+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~----- 147 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN----- 147 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-----
Confidence 999999986542 378889999999999999999999999999999999999999999999999853211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
......+|++.|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 148 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 148 ------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred ------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 012245789999999999999999999999999999999999999975
No 165
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.98 E-value=1.1e-31 Score=296.73 Aligned_cols=214 Identities=25% Similarity=0.396 Sum_probs=180.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||.|+||.||++.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++..++..|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 35789999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-- 157 (301)
T cd07873 82 VFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-- 157 (301)
T ss_pred EEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC--
Confidence 999995 6898888654 345899999999999999999999999999999999999999999999999998542110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 158 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 158 -------------------------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred -------------------------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0111233578899999998764 57889999999999999999999999888776
Q ss_pred HHHHHH
Q 002342 906 TFANIL 911 (934)
Q Consensus 906 ~~~~i~ 911 (934)
.+..+.
T Consensus 213 ~~~~~~ 218 (301)
T cd07873 213 QLHFIF 218 (301)
T ss_pred HHHHHH
Confidence 665554
No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.98 E-value=1.2e-31 Score=295.04 Aligned_cols=215 Identities=28% Similarity=0.467 Sum_probs=183.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++++.||.|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46799999999999999999999999999999998754 445567788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|..++.... ..+++..+..++.|++.+|.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~---- 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK---- 162 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccc----
Confidence 99999999988775432 4589999999999999999999999999999999999999999999999998743210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.........|++.|+|||++. ...++.++|+|||||++|+|++|.+||...+
T Consensus 163 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 163 -----------------------TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred -----------------------cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 011123446889999999985 3456779999999999999999999998887
Q ss_pred HHHHHHHHHcC
Q 002342 903 RQKTFANILHK 913 (934)
Q Consensus 903 ~~~~~~~i~~~ 913 (934)
....+.++...
T Consensus 220 ~~~~~~~~~~~ 230 (292)
T cd06644 220 PMRVLLKIAKS 230 (292)
T ss_pred HHHHHHHHhcC
Confidence 77666666544
No 167
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.98 E-value=1.3e-31 Score=293.01 Aligned_cols=213 Identities=28% Similarity=0.460 Sum_probs=182.5
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|++.+.||.|+||.||++.+..++..+++|.+... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 378999999999999999999999999999998653 34456678889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|..++... ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----- 156 (282)
T cd06643 83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----- 156 (282)
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----
Confidence 99999998887543 245899999999999999999999999999999999999999999999999998542110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
........|++.|+|||++. +..++.++|+|||||++|+|++|++||...+..
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 157 ----------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred ----------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 01123456899999999984 445778999999999999999999999988877
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+....+...
T Consensus 215 ~~~~~~~~~ 223 (282)
T cd06643 215 RVLLKIAKS 223 (282)
T ss_pred HHHHHHhhc
Confidence 776666554
No 168
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=1.4e-31 Score=289.95 Aligned_cols=217 Identities=26% Similarity=0.372 Sum_probs=181.6
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccc--ccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCeE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~--~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~ 744 (934)
.+|++.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|+.+++.++||||+++++++.+ ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999886432 1223445678899999999999999999999876 3578
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999998543110
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
. ..........|+..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 C------------------------LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred c------------------------ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 0 0001122346899999999999888999999999999999999999999877666
Q ss_pred HHHHHHH
Q 002342 905 KTFANIL 911 (934)
Q Consensus 905 ~~~~~i~ 911 (934)
..+..+.
T Consensus 216 ~~~~~~~ 222 (265)
T cd06652 216 AAIFKIA 222 (265)
T ss_pred HHHHHHh
Confidence 5555544
No 169
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.98 E-value=9.3e-32 Score=291.39 Aligned_cols=218 Identities=29% Similarity=0.442 Sum_probs=184.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.||||.+.+...........+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887644444455567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988632 23458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--H
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~--~ 904 (934)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234689999999999998899999999999999999999999976543 3
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
...+.+...
T Consensus 215 ~~~~~~~~~ 223 (267)
T cd08229 215 SLCKKIEQC 223 (267)
T ss_pred HHhhhhhcC
Confidence 444555443
No 170
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.98 E-value=9.5e-32 Score=293.74 Aligned_cols=216 Identities=27% Similarity=0.481 Sum_probs=186.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||.|+||.||++.+..++..+|+|++... .......+.+|+.+++.++||||+++++++..+...|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 35799999999999999999999889999999998643 445566788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--- 156 (280)
T cd06611 81 IEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--- 156 (280)
T ss_pred eeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc---
Confidence 9999999999998654 245999999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
........|++.|+|||++. ...++.++|+|||||++|+|++|++||.+.+
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 157 ------------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN 212 (280)
T ss_pred ------------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence 11123456899999999985 3456779999999999999999999999888
Q ss_pred HHHHHHHHHcCC
Q 002342 903 RQKTFANILHKD 914 (934)
Q Consensus 903 ~~~~~~~i~~~~ 914 (934)
....+..+..+.
T Consensus 213 ~~~~~~~~~~~~ 224 (280)
T cd06611 213 PMRVLLKILKSE 224 (280)
T ss_pred HHHHHHHHhcCC
Confidence 877777776654
No 171
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.98 E-value=9.2e-32 Score=293.08 Aligned_cols=223 Identities=18% Similarity=0.270 Sum_probs=186.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+..++|++.+.||.|+||.||++.+... +..||+|.+.... .......+.+|+.+|+.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 35667899999999999999999998654 3789999986532 2334456788999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
.....|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999986532 12367889999999999999999999999999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~el 891 (934)
|+|||+++...... .........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCc-------------------------ccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 99999985432110 01112334578899999999988899999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 892 LY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
++ |.+||.+.+..+..+.+..+.
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCC
Confidence 98 999999988888888777543
No 172
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=4.2e-33 Score=311.30 Aligned_cols=213 Identities=25% Similarity=0.392 Sum_probs=184.3
Q ss_pred ccccccccCCcEEEEEEEEecCCeEEEEEEeec-ccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe--EEEEE
Q 002342 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK-GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH--VCLIT 748 (934)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~-~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~lV~ 748 (934)
+....||+|+|-+||+|.|..+|..||--.++. +.......+.++..|+.+|+.|+||||+++|+++.+... +-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 445679999999999999999998887544332 233456677899999999999999999999999987654 78999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEEecC-CcEEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~~~~~ 825 (934)
|++..|+|..|+++. +.++...++.|++||+.||.|||++ .|||||||++||+|+.+ |.|||+|+|+|..+..+
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 999999999999885 4589999999999999999999998 59999999999999865 89999999999764321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC-CCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR-GKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~-~~~~~ 904 (934)
...+.+|||.|||||+.. ..|+..+||||||++++||+|+..||. +.+..
T Consensus 200 ----------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 200 ----------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ----------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 223478999999999998 779999999999999999999999998 68888
Q ss_pred HHHHHHHcCCCC
Q 002342 905 KTFANILHKDLK 916 (934)
Q Consensus 905 ~~~~~i~~~~~~ 916 (934)
++|+++.+|..+
T Consensus 251 QIYKKV~SGiKP 262 (632)
T KOG0584|consen 251 QIYKKVTSGIKP 262 (632)
T ss_pred HHHHHHHcCCCH
Confidence 999999998754
No 173
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.98 E-value=3.6e-31 Score=293.77 Aligned_cols=209 Identities=28% Similarity=0.449 Sum_probs=181.6
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||++++++|..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999987532 2344566889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999765 458999999999999999999998 5999999999999999999999999998743210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
......+|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0123457899999999998888999999999999999999999999877655444
Q ss_pred HHH
Q 002342 908 ANI 910 (934)
Q Consensus 908 ~~i 910 (934)
..+
T Consensus 208 ~~~ 210 (308)
T cd06615 208 AMF 210 (308)
T ss_pred Hhh
Confidence 333
No 174
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.98 E-value=6.8e-32 Score=303.30 Aligned_cols=221 Identities=26% Similarity=0.383 Sum_probs=178.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~ 737 (934)
|++..++|++.+.||.|+||.||+|.+.. +++.||+|.+.... .......+..|+.++..+ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 34556789999999999999999997543 45789999986432 233445678899999999 89999999998
Q ss_pred EEe-CCeEEEEEEccCCCCchhhhccCCC---------------------------------------------------
Q 002342 738 FQT-KTHVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 765 (934)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 765 (934)
+.. +..++++|||+++++|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 4678999999999999998864321
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhc
Q 002342 766 --------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 837 (934)
Q Consensus 766 --------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~ 837 (934)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 2578999999999999999999999999999999999999999999999999864321100
Q ss_pred cccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002342 838 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (934)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~ 911 (934)
........+++.|+|||++.+..++.++|||||||+||+|++ |.+||.+....+.+....
T Consensus 229 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~ 289 (337)
T cd05054 229 --------------YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL 289 (337)
T ss_pred --------------hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 011223456788999999999999999999999999999997 999998765544443333
No 175
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.98 E-value=1.2e-31 Score=296.72 Aligned_cols=224 Identities=23% Similarity=0.350 Sum_probs=185.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~ 738 (934)
.+..++|.+.+.||.|+||.||++.+. .++..+|+|.+.+.. .......+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 355678999999999999999999863 345689999887532 234456788999999999 799999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
...+..|+||||+.+++|.+++.......+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654455899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |.+|
T Consensus 189 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321100 001123346789999999999999999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcCCC
Q 002342 898 FRGKTRQKTFANILHKDL 915 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~ 915 (934)
|.+......+..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~ 261 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGY 261 (302)
T ss_pred cCCCCchHHHHHHHHcCC
Confidence 988776655555544433
No 176
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.98 E-value=1.8e-31 Score=291.14 Aligned_cols=223 Identities=17% Similarity=0.260 Sum_probs=184.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999998743 35689999886432 22344567899999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPT--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~--------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl 812 (934)
....++||||+++++|.+++..... ..++...+..++.|++.||.|||++|++||||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999999865321 23577888999999999999999999999999999999999999999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
+|||++........ ........+++.|||||++.+..++.++|+|||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99999854321100 00111234678899999999989999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 893 Y-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
+ |.+||.+.+..+.++.+..+.+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGL 239 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCc
Confidence 8 8999999988888887776654
No 177
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.1e-31 Score=307.98 Aligned_cols=200 Identities=27% Similarity=0.427 Sum_probs=171.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
...+|.+++.||.|+||.||++... .+++.||+|.+... ....+|+.+|+.++||||++++++|......
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3468999999999999999999764 35678999987643 2345799999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 162 ~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999 67888888543 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. .........||+.|+|||++.+..++.++|||||||+||+|++|+.||.+..
T Consensus 239 ~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 239 P-------------------------DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred c-------------------------ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 0 0111234679999999999999999999999999999999999999998754
No 178
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=1.1e-31 Score=290.47 Aligned_cols=216 Identities=25% Similarity=0.361 Sum_probs=181.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.++||+|+||.||+|.+..++ .||+|.+.+... ....+.+|+.+++.++||||+++++++. ....|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 44578999999999999999999886654 599999875321 2346788999999999999999998875 46689
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999976545568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
........++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred --------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 001112346788999999998899999999999999999999 99999988888
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+.+..+..+
T Consensus 211 ~~~~~~~~~ 219 (262)
T cd05071 211 EVLDQVERG 219 (262)
T ss_pred HHHHHHhcC
Confidence 888777654
No 179
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=1.1e-31 Score=289.89 Aligned_cols=217 Identities=25% Similarity=0.383 Sum_probs=182.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||++.+. ++..+|+|.+..... ....+.+|+.+++.++|||++++++++. ....
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 345678999999999999999999874 556799999876432 2346889999999999999999999875 4568
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|++|||+++++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999999997655566899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ........++..|+|||++.+..++.++|+||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 156 E--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred c--------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112245678999999998889999999999999999999 9999999888
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
.+....+..+
T Consensus 210 ~~~~~~~~~~ 219 (260)
T cd05070 210 REVLEQVERG 219 (260)
T ss_pred HHHHHHHHcC
Confidence 8888877654
No 180
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=260.83 Aligned_cols=214 Identities=23% Similarity=0.402 Sum_probs=186.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.|..+++||+|.||+||++++..++..||+|.++-+.. +...-....+|+.+|+.+.|.|||+++++...+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 578899999999999999999999999999999886432 2333456788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||| ..+|..+...- .+.++.+.++.++.|++.||.|+|+.++.||||||.|+||+.+|.+|++|||+++.++..
T Consensus 81 e~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip---- 154 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---- 154 (292)
T ss_pred HHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc----
Confidence 999 77888887664 356999999999999999999999999999999999999999999999999999765321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHH-hCCCCCCCCCHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 906 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~ell-tG~~Pf~~~~~~~~ 906 (934)
.+-.+..+-|.+|.+|.++.+. -|+...|+||.||++.|+. .|+|.|+|.+-.++
T Consensus 155 -----------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred -----------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 1112334679999999999886 4688999999999999999 59999999999999
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+++|..
T Consensus 212 lkrif~ 217 (292)
T KOG0662|consen 212 LKRIFR 217 (292)
T ss_pred HHHHHH
Confidence 998864
No 181
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.98 E-value=1.3e-31 Score=291.10 Aligned_cols=213 Identities=29% Similarity=0.446 Sum_probs=179.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe------C
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------K 741 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~------~ 741 (934)
+.|++.+.||.|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 57999999999999999999999999999999987532 2335678899999998 79999999999875 2
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|++|||+.+++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999988655556999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
... ........|++.|+|||++. +..++.++|+|||||++|+|++|..
T Consensus 162 ~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 162 DRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred ccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 110 11223457999999999986 3467889999999999999999999
Q ss_pred CCCCCCHHHHHHHHHc
Q 002342 897 PFRGKTRQKTFANILH 912 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~ 912 (934)
||...........+..
T Consensus 215 p~~~~~~~~~~~~~~~ 230 (272)
T cd06637 215 PLCDMHPMRALFLIPR 230 (272)
T ss_pred CccccCHHHHHHHHhc
Confidence 9987766655555444
No 182
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.98 E-value=1.3e-31 Score=288.51 Aligned_cols=202 Identities=40% Similarity=0.654 Sum_probs=176.6
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|++.+.||+|+||+||++.+..+++.||+|++...... ........+|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999875322 22223345699999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+.+++|.+++... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------- 149 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--------
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 9998999999843 459999999999999999999999999999999999999999999999999985421
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
..........+++.|+|||++. +..++.++|+||||+++|+|++|..||....
T Consensus 150 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~ 203 (260)
T PF00069_consen 150 -------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN 203 (260)
T ss_dssp -------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS
T ss_pred -------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0112234557899999999998 8888999999999999999999999999873
No 183
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.98 E-value=1.5e-31 Score=290.21 Aligned_cols=225 Identities=24% Similarity=0.353 Sum_probs=186.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
+..+|++.+.||+|+||.||++.+..++ ..+|+|.+.... .......+.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 3468999999999999999999986544 479999886532 23345678889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999999997653 4589999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
.... ........++..|+|||.+.+..++.++|+|||||++|++++ |..||.+.+
T Consensus 159 ~~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 159 DPEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred ccce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 1100 001112234568999999998889999999999999999886 999999888
Q ss_pred HHHHHHHHHcCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPS 919 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~ 919 (934)
..+....+.++ ..+|.
T Consensus 215 ~~~~~~~~~~~-~~~~~ 230 (267)
T cd05066 215 NQDVIKAIEEG-YRLPA 230 (267)
T ss_pred HHHHHHHHhCC-CcCCC
Confidence 88888777765 33443
No 184
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.98 E-value=2.6e-31 Score=297.48 Aligned_cols=222 Identities=19% Similarity=0.311 Sum_probs=179.9
Q ss_pred ccccccccC--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 672 RPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 672 ~i~~~LG~G--~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
++++.||+| +|++||++.++.+|+.||+|.+..... .......+.+|+.+++.++||||++++++|..++..|+|||
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence 356789999 789999999999999999999875432 23445667789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~-- 157 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR-- 157 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc--
Confidence 999999999987654455899999999999999999999999999999999999999999999999876332110000
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
. ...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||........+
T Consensus 158 --------------~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 219 (327)
T cd08227 158 --------------L----RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 219 (327)
T ss_pred --------------c----cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHH
Confidence 0 000001123357888999999976 46889999999999999999999999877666655
Q ss_pred HHHHcCC
Q 002342 908 ANILHKD 914 (934)
Q Consensus 908 ~~i~~~~ 914 (934)
.....+.
T Consensus 220 ~~~~~~~ 226 (327)
T cd08227 220 LEKLNGT 226 (327)
T ss_pred HHHhcCC
Confidence 5554443
No 185
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=1.9e-31 Score=291.75 Aligned_cols=223 Identities=21% Similarity=0.343 Sum_probs=186.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
++..+|.+.+.||.|+||.||++.+..+ +..||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456799999999999999999988543 5789999987532 23344668889999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~ 806 (934)
....++++||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998532 1234788889999999999999999999999999999999999
Q ss_pred CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHH
Q 002342 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (934)
Q Consensus 807 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~ 886 (934)
++.+||+|||++....... .........+++.|+|||++.+..++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAAD-------------------------YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccch-------------------------heeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 9999999999985432110 001122335678999999999888999999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 887 iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
++|+|++ |.+||.+.+..+.+..+.++..
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~ 244 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQV 244 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 9999997 9999999988889988887664
No 186
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.98 E-value=1.9e-31 Score=290.34 Aligned_cols=214 Identities=30% Similarity=0.500 Sum_probs=186.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|++|.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++..+..+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47999999999999999999999999999999987542 2344566789999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++... .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998753 58999999999999999999999999999999999999999999999999986542110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|++.|+|||++.+..++.++|+|||||++|+|++|++||.+.+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11234568899999999999889999999999999999999999998877766666
Q ss_pred HHHcCC
Q 002342 909 NILHKD 914 (934)
Q Consensus 909 ~i~~~~ 914 (934)
.+..+.
T Consensus 209 ~~~~~~ 214 (274)
T cd06609 209 LIPKNN 214 (274)
T ss_pred HhhhcC
Confidence 665543
No 187
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=1.5e-31 Score=295.07 Aligned_cols=209 Identities=25% Similarity=0.448 Sum_probs=181.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|++.+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||++++++|..+.+.|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 58999999999999999999999999999999987543 223466888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.. ..++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~---- 169 (296)
T cd06654 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---- 169 (296)
T ss_pred cccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc----
Confidence 99999999999864 34889999999999999999999999999999999999999999999999988542110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|++.|+|||.+.+..++.++|+|||||++|+|++|++||...+......
T Consensus 170 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~ 226 (296)
T cd06654 170 -----------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226 (296)
T ss_pred -----------------------ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH
Confidence 011123468999999999999889999999999999999999999998877655443
Q ss_pred HH
Q 002342 909 NI 910 (934)
Q Consensus 909 ~i 910 (934)
.+
T Consensus 227 ~~ 228 (296)
T cd06654 227 LI 228 (296)
T ss_pred HH
Confidence 33
No 188
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.98 E-value=2.2e-31 Score=286.86 Aligned_cols=212 Identities=24% Similarity=0.419 Sum_probs=181.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE-eCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~ 743 (934)
.++..+|++.+.||+|+||.||++.. .+..+|+|.+... .....+.+|+.+++.++|+|++++++++. ..+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 46678999999999999999999976 4778999988643 23456889999999999999999998754 5567
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|++|||+++++|.+++.......+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 89999999999999999776555689999999999999999999999999999999999999999999999998843210
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
......++..|+|||++.+..++.++|||||||++|+|++ |++||...+
T Consensus 155 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 ------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred ------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0112234678999999999889999999999999999997 999999888
Q ss_pred HHHHHHHHHcC
Q 002342 903 RQKTFANILHK 913 (934)
Q Consensus 903 ~~~~~~~i~~~ 913 (934)
..+....+..+
T Consensus 205 ~~~~~~~~~~~ 215 (256)
T cd05082 205 LKDVVPRVEKG 215 (256)
T ss_pred HHHHHHHHhcC
Confidence 87777777654
No 189
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=2e-31 Score=287.32 Aligned_cols=214 Identities=24% Similarity=0.393 Sum_probs=180.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
..+|++.+.||+|+||.||++.+. ++..+|+|.+.+... ....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 457999999999999999999885 466899999875422 224577899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-- 154 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-- 154 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc--
Confidence 99999999999987643 358999999999999999999999999999999999999999999999999885432100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~ 906 (934)
........++..|+|||.+.+..++.++|+||||+++|+|++ |.+||...+..+.
T Consensus 155 ------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 155 ------------------------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred ------------------------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 000111224568999999999999999999999999999998 8999998888888
Q ss_pred HHHHHcC
Q 002342 907 FANILHK 913 (934)
Q Consensus 907 ~~~i~~~ 913 (934)
...+..+
T Consensus 211 ~~~~~~~ 217 (256)
T cd05059 211 VESVSAG 217 (256)
T ss_pred HHHHHcC
Confidence 8777654
No 190
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3e-31 Score=307.66 Aligned_cols=197 Identities=27% Similarity=0.378 Sum_probs=169.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
...+|.+.+.||+|+||.||++.+..+++.||||.... ..+.+|+.+|+.++||||+++++++..++..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999996432 235679999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
|||++ .++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 678988886542 4599999999999999999999999999999999999999999999999999864321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.......+||+.|||||++.+..++.++|||||||+||||++|..|+.
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 011124579999999999999999999999999999999999876554
No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=3.2e-31 Score=290.10 Aligned_cols=212 Identities=26% Similarity=0.412 Sum_probs=178.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||+|++|.||++.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES-EEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc-ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 5899999999999999999999999999999986532 222334567889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|+. ++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 995 68888876533 256899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.....
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 155 -----------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred -----------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0111233578999999998754 5688999999999999999999999987766554
Q ss_pred HHH
Q 002342 908 ANI 910 (934)
Q Consensus 908 ~~i 910 (934)
..+
T Consensus 212 ~~~ 214 (285)
T cd07861 212 FRI 214 (285)
T ss_pred HHH
Confidence 443
No 192
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=2.7e-31 Score=287.43 Aligned_cols=219 Identities=30% Similarity=0.440 Sum_probs=186.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.||+|.++............+.+|+.+++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999999899999999987644444555678889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||+++++|..++... ....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-- 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC--
Confidence 999999999988642 2345899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--HH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 904 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~--~~ 904 (934)
........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||.... ..
T Consensus 160 -------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 160 -------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred -------------------------CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 011123468899999999999999999999999999999999999996543 34
Q ss_pred HHHHHHHcCC
Q 002342 905 KTFANILHKD 914 (934)
Q Consensus 905 ~~~~~i~~~~ 914 (934)
+....+..+.
T Consensus 215 ~~~~~~~~~~ 224 (267)
T cd08224 215 SLCKKIEKCD 224 (267)
T ss_pred HHHhhhhcCC
Confidence 4555555543
No 193
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=3.4e-31 Score=286.82 Aligned_cols=218 Identities=26% Similarity=0.383 Sum_probs=182.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccc--ccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~--~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~ 744 (934)
.+|.+.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999875421 12344566788999999999999999999998763 568
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999998543110
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
. ..........|+..|+|||++.+..++.++|+|||||++|+|++|++||......
T Consensus 160 ~------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 C------------------------MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred c------------------------ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 0 0001112356899999999999888899999999999999999999999887766
Q ss_pred HHHHHHHc
Q 002342 905 KTFANILH 912 (934)
Q Consensus 905 ~~~~~i~~ 912 (934)
..+.++..
T Consensus 216 ~~~~~~~~ 223 (264)
T cd06653 216 AAIFKIAT 223 (264)
T ss_pred HHHHHHHc
Confidence 66655543
No 194
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=1.8e-31 Score=288.16 Aligned_cols=216 Identities=25% Similarity=0.396 Sum_probs=183.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|+++++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++||||+++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 4567899999999999999999986 4567899999875432 2356788999999999999999999874 46789
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
++|||+.+++|.+++.......++...+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 99999999999999876655679999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
........++..|+|||++.+..++.++|+||||+++|+|++ |++||.+.+..
T Consensus 157 --------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 210 (260)
T cd05067 157 --------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP 210 (260)
T ss_pred --------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH
Confidence 001122346788999999998889999999999999999998 99999998888
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+....+..+
T Consensus 211 ~~~~~~~~~ 219 (260)
T cd05067 211 EVIQNLERG 219 (260)
T ss_pred HHHHHHHcC
Confidence 887777554
No 195
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=5.2e-31 Score=284.39 Aligned_cols=217 Identities=27% Similarity=0.450 Sum_probs=187.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.+++|++... .......+.+|+.+++.++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5899999999999999999999999999999998754 2335677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+.+++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 9999999999887642 45999999999999999999999999999999999999999999999999998542110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
........|+..|+|||.+.+. .++.++|+|||||++|+|++|++||.+.+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0112345688899999999777 78889999999999999999999999887766
Q ss_pred HHHHHHcCCCC
Q 002342 906 TFANILHKDLK 916 (934)
Q Consensus 906 ~~~~i~~~~~~ 916 (934)
....+....+.
T Consensus 212 ~~~~~~~~~~~ 222 (262)
T cd06613 212 ALFLISKSNFP 222 (262)
T ss_pred HHHHHHhccCC
Confidence 66666555443
No 196
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.3e-31 Score=295.08 Aligned_cols=223 Identities=23% Similarity=0.345 Sum_probs=183.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 736 (934)
.+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.+.. .......+.+|+.+++.+ +||||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 3445789999999999999999998753 23579999987542 233456788899999999 7999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
++...+..|+||||+++++|.+++..+.. ..++...+..++.|++.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 99999999999999999999999975421 3488899999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|+|
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 226 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 226 (307)
T ss_pred EEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHH
Confidence 999999999999999854321000 0011122345789999999998899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
||||++|+|++ |.+||.+....++...+..+.
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 259 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 259 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC
Confidence 99999999998 999999888777777776554
No 197
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.6e-32 Score=315.81 Aligned_cols=230 Identities=25% Similarity=0.407 Sum_probs=195.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
+...+-.+.+.||+|+||+||+++... +...||||.++... +.+...+|.+|+++|..++|||||+|++++..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 445677888999999999999998854 34689999998653 45567889999999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
++.+|||+|||..|+|.++|.... ...++..+...|+.||+.||+||-++.+|||||...|+||..+.
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 999999999999999999997531 12388999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.|||+|||+++..... +.++ ......-..+|||||.++-++|+.+||||||||+|
T Consensus 641 ~VKIsDfGLsRdiYss---------DYYk----------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSS---------DYYK----------------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVL 695 (774)
T ss_pred EEEecccccchhhhhh---------hhhc----------------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhh
Confidence 9999999999654321 1111 11122346789999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTP 922 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~ 922 (934)
||+++ |+-||.+.+++++++.|.+|.+ +-|...|
T Consensus 696 WEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP 731 (774)
T KOG1026|consen 696 WEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCP 731 (774)
T ss_pred hhhhccccCcccccchHHHHHHHHcCCcccCCCCCC
Confidence 99996 9999999999999999999886 5555443
No 198
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=263.48 Aligned_cols=225 Identities=27% Similarity=0.415 Sum_probs=186.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~ 742 (934)
..+.-+....+..||+|+||.|-+.++..+|...|+|.+.... ..+..+++.+|+.+.... .+|++|.||+.+....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 4455567777889999999999999999999999999987543 344556778888886555 7999999999999999
Q ss_pred eEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 743 HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
.+||.||.| ..||..+..+ ..++.+++..+-+|+..++.||.|||++ .+||||+||+||||+.+|+||+||||+|.
T Consensus 119 dvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999999 7777666443 2356799999999999999999999987 99999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC----CCCCchhHHHHHHHHHHHHHhCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~~DiwSlG~iL~elltG~ 895 (934)
.+..+- ..+...|...|||||.+.. ..|+.++||||||++++||.+++
T Consensus 198 ~L~dSi----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr 249 (282)
T KOG0984|consen 198 YLVDSI----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILR 249 (282)
T ss_pred eehhhh----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcc
Confidence 543221 1123468889999999843 47889999999999999999999
Q ss_pred CCCCC-CCHHHHHHHHHcCCC-CCCC
Q 002342 896 TPFRG-KTRQKTFANILHKDL-KFPS 919 (934)
Q Consensus 896 ~Pf~~-~~~~~~~~~i~~~~~-~~p~ 919 (934)
.||.. .++.+++++++...- ++|.
T Consensus 250 ~PY~~w~tpF~qLkqvVeep~P~Lp~ 275 (282)
T KOG0984|consen 250 FPYESWGTPFQQLKQVVEEPSPQLPA 275 (282)
T ss_pred ccccccCCHHHHHHHHhcCCCCCCcc
Confidence 99984 777899999987553 4444
No 199
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=5e-31 Score=289.57 Aligned_cols=223 Identities=17% Similarity=0.265 Sum_probs=184.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.++.++|++.+.||+|+||.||++.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4566899999999999999999997653 35689999876432 2233456778999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
..+..|+||||+++++|.+++.... ...++...+..++.|++.||.|||++||+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999996532 12356778889999999999999999999999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~el 891 (934)
|+|||++........ ........++..|+|||.+.+..++.++|+|||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999854321100 0111223467789999999998999999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 892 LY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
++ |.+||.+.+..+.++.+..+.
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCC
Confidence 98 899999988888888777654
No 200
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=2e-31 Score=293.16 Aligned_cols=226 Identities=23% Similarity=0.358 Sum_probs=188.6
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcccee
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~ 735 (934)
+...+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++.+ +||||++++
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 34556778999999999999999999998644 3789999987542 233446688999999999 899999999
Q ss_pred EEEEeCCeEEEEEEccCCCCchhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
+++...+.+|++|||+++++|..++... ....+++..+..++.|++.||.|||++||+||||||+|
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 9999999999999999999999998642 23568999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
|+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred EEEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccce
Confidence 9999999999999999864321100 001112235678999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
|||||++|+|++ |..||.+....+.+..+..+.
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 251 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY 251 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999997 999999988888887776654
No 201
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=3.4e-31 Score=292.29 Aligned_cols=216 Identities=24% Similarity=0.345 Sum_probs=180.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
++|++.+.||.|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+..|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877764 4688877632 2334456788999999999 7999999999999999999
Q ss_pred EEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 746 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999986532 13488999999999999999999999999999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~el 891 (934)
|+|||++..... .........+..|+|||++.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccc----------------------------eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 999998742100 0001111235679999999998899999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 892 LY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
++ |.+||.+.+..+.+..+..+.
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcCC
Confidence 97 999999998888888877653
No 202
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=4.3e-31 Score=288.48 Aligned_cols=219 Identities=21% Similarity=0.324 Sum_probs=181.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+..++|++.+.||.|+||.||++.+..++. .||+|.+.... .......+.+|+.+++.++||||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877766 48999886532 34445678899999999999999999999875
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...+++|||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987542 45999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..... ........+++.|+|||.+.+..++.++|||||||++|||++ |.+||..
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDET-------------------------EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccc-------------------------eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 21100 000111235678999999999999999999999999999998 9999988
Q ss_pred CCHHHHHHHHHcC
Q 002342 901 KTRQKTFANILHK 913 (934)
Q Consensus 901 ~~~~~~~~~i~~~ 913 (934)
.........+..+
T Consensus 215 ~~~~~~~~~~~~~ 227 (279)
T cd05109 215 IPAREIPDLLEKG 227 (279)
T ss_pred CCHHHHHHHHHCC
Confidence 7777766665554
No 203
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=4.2e-31 Score=284.95 Aligned_cols=225 Identities=21% Similarity=0.328 Sum_probs=182.1
Q ss_pred ccccCCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 676 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
.||+|+||.||++.+ ..++..+|+|++... .........+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND-NNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC-CCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 689999999999965 457889999998654 2344556778899999999999999999998764 567999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999998754 45899999999999999999999999999999999999999999999999998553211100
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHc
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (934)
........+++.|+|||.+....++.++|+|||||++|+|++ |.+||.+.+..+..+.+.+
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 001112245689999999988889999999999999999997 9999998888888888876
Q ss_pred CCC-CCCCCCCCCcccCCC
Q 002342 913 KDL-KFPSSTPSSCKAANV 930 (934)
Q Consensus 913 ~~~-~~p~~~~~s~~~k~l 930 (934)
+.. ++|. ..+.++++|
T Consensus 214 ~~~~~~~~--~~~~~l~~l 230 (257)
T cd05116 214 GERMECPQ--RCPPEMYDL 230 (257)
T ss_pred CCCCCCCC--CCCHHHHHH
Confidence 553 3333 234444444
No 204
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3.2e-31 Score=303.63 Aligned_cols=225 Identities=24% Similarity=0.329 Sum_probs=183.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~ 737 (934)
+.+..++|.+.+.||+|+||.||++++. .+++.||+|++.... .......+.+|+.+|..+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4466678999999999999999999964 345789999997542 2233456889999999997 9999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCC----------------------------------------------------
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 765 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 765 (934)
+...+..|+|||||.+|+|.+++.+...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999865321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 766 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 766 --------------------------------------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
..++...+..++.||+.||.|||++||+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 246777888999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
||++.++.+||+|||++........ ........+++.|||||++.+..++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999854211000 011123457889999999999889999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
|||||++|+|++ |..||......+.+...+.+..
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~ 359 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGY 359 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCC
Confidence 999999999998 9999987666665555444443
No 205
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=2e-31 Score=287.38 Aligned_cols=220 Identities=39% Similarity=0.716 Sum_probs=188.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..++..||+|++.+.........+.+.+|++++++++||||+++++++....+.|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999998999999999987554454567788999999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.|++|..++... ..+++..+..++.||+.||.|||.+|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~----- 153 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD----- 153 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-----
Confidence 99999999998765 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH---HHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR---QKT 906 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~---~~~ 906 (934)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+. ..+
T Consensus 154 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 154 -----------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred -----------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 011234688899999999988899999999999999999999999998774 344
Q ss_pred HHHHHcCCCCCCC
Q 002342 907 FANILHKDLKFPS 919 (934)
Q Consensus 907 ~~~i~~~~~~~p~ 919 (934)
...+......+|.
T Consensus 211 ~~~~~~~~~~~~~ 223 (258)
T cd05578 211 RAKQETADVLYPA 223 (258)
T ss_pred HHHhccccccCcc
Confidence 4333334444443
No 206
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=4.4e-31 Score=286.23 Aligned_cols=218 Identities=23% Similarity=0.291 Sum_probs=185.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.++|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 46799999999999999999998654 4589999887542 334456688899999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|++|||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999987653 36899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
.. ........+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 160 ~~-------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 160 EA-------------------------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred cc-------------------------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 00 001112235678999999998899999999999999999997 9999998888
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
.+....+..+
T Consensus 215 ~~~~~~~~~~ 224 (266)
T cd05033 215 QDVIKAVEDG 224 (266)
T ss_pred HHHHHHHHcC
Confidence 8888877664
No 207
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=6.2e-31 Score=283.96 Aligned_cols=218 Identities=25% Similarity=0.374 Sum_probs=186.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||.|+||.||++.+. +++.+|+|.+..... ....+.+|+.+++.++||||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999975 557899999875422 235688899999999999999999999998999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
++||||+++++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999998765567999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ........++..|+|||.+.+..++.++|+||||+++|+|++ |+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 157 E--------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred h--------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0 000112234678999999999889999999999999999998 9999999888
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
...+..+..+
T Consensus 211 ~~~~~~~~~~ 220 (261)
T cd05034 211 REVLEQVERG 220 (261)
T ss_pred HHHHHHHHcC
Confidence 8888888664
No 208
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=3.6e-31 Score=285.48 Aligned_cols=218 Identities=23% Similarity=0.358 Sum_probs=183.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+.++|++.+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 34679999999999999999998743 45699998875422 23567889999999999999999999999899999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+.+++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 77 v~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-
Confidence 999999999999987643 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~ 905 (934)
........++..|+|||++.+..++.++|+|||||++|+|++ |..||...+..+
T Consensus 155 -------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 155 -------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred -------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 001112245678999999998889999999999999999998 999999888888
Q ss_pred HHHHHHcCCCC
Q 002342 906 TFANILHKDLK 916 (934)
Q Consensus 906 ~~~~i~~~~~~ 916 (934)
....+.++...
T Consensus 210 ~~~~~~~~~~~ 220 (256)
T cd05113 210 TVEKVSQGLRL 220 (256)
T ss_pred HHHHHhcCCCC
Confidence 88888776543
No 209
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=5.2e-31 Score=283.15 Aligned_cols=211 Identities=22% Similarity=0.332 Sum_probs=176.9
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||+|+||.||++.+..+++.||+|.+.+.. .......+.+|+.+++.++||||+++++++......|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3444567889999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 79 ~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 149 (252)
T cd05084 79 DFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-------- 149 (252)
T ss_pred cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--------
Confidence 9999986542 4589999999999999999999999999999999999999999999999999853211000
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+.......+..+
T Consensus 150 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~ 212 (252)
T cd05084 150 -----------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212 (252)
T ss_pred -----------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 000011123567999999999889999999999999999997 99999888877776666553
No 210
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=2.4e-31 Score=296.14 Aligned_cols=199 Identities=28% Similarity=0.430 Sum_probs=161.6
Q ss_pred ccccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCeEEEEEE
Q 002342 674 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 749 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~~lV~E 749 (934)
.++||+|+||.||+|.++ .+++.||+|.+.... ....+.+|+.+|+.++||||++++++|.. +..+|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999975 467899999886532 12346789999999999999999999854 567899999
Q ss_pred ccCCCCchhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecccC
Q 002342 750 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (934)
Q Consensus 750 ~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl----~~~~~vkl~DFG~a 818 (934)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 66888876532 12358999999999999999999999999999999999999 45678999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
....... .+.......+||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 160 ~~~~~~~------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPL------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCC------------------------ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 6532110 011122345789999999999874 578899999999999999999999
Q ss_pred CCCCC
Q 002342 898 FRGKT 902 (934)
Q Consensus 898 f~~~~ 902 (934)
|.+..
T Consensus 216 f~~~~ 220 (317)
T cd07868 216 FHCRQ 220 (317)
T ss_pred ccCCc
Confidence 97543
No 211
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=4e-31 Score=292.67 Aligned_cols=223 Identities=22% Similarity=0.342 Sum_probs=186.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-------cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 736 (934)
.+..++|++.+.||+|+||.||++++. .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 356788999999999999999999853 234589999886532 234456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
++......|++|||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999987542 13478888999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 999999999999999864321100 0111223467789999999998899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
|||+++|+|++ |..||.+.+..+++..+..+.
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 256 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 256 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC
Confidence 99999999998 899999988888888876554
No 212
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-33 Score=293.97 Aligned_cols=242 Identities=29% Similarity=0.470 Sum_probs=198.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC----hHHHHHHHHHHHHHHhCCCCCccceeEEEE-eCC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQ-TKT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~----~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~ 742 (934)
.++|-++..||+|||+.||++.|....++||+|+-..+.... ....+...+|..|.+.|+||.||++|++|. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 478999999999999999999999999999999865332221 223455678999999999999999999997 567
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEEec---CCcEEEEeccc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDFDL 817 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--giiHrDLKp~NILl~~---~~~vkl~DFG~ 817 (934)
.+|-|+|||+|.+|.-+++.. +.+++.+++.|+.||+.||.||... .|||=||||.|||+.+ .|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 889999999999999998764 6699999999999999999999987 6999999999999964 46799999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC----CCCchhHHHHHHHHHHHHHh
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~s~~~DiwSlG~iL~ellt 893 (934)
++++.+++... ......+....||.+|++||++.-+ +.+.++||||+||++|.+++
T Consensus 620 SKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 620 SKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred hhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 99886554321 1122345677899999999998543 55779999999999999999
Q ss_pred CCCCCCCCCH-HHHHH--HHH-cCCCCCCCCCCCCcccCCCC
Q 002342 894 GYTPFRGKTR-QKTFA--NIL-HKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 894 G~~Pf~~~~~-~~~~~--~i~-~~~~~~p~~~~~s~~~k~l~ 931 (934)
|+-||...-. +++++ -|+ ....+||.-+-.|..+|+|+
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFI 721 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFI 721 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHH
Confidence 9999975433 34433 343 45689999888888888774
No 213
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=8.3e-31 Score=283.97 Aligned_cols=220 Identities=29% Similarity=0.450 Sum_probs=184.7
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC------hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~------~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
+|.+.+.||.|++|.||+|.+..+++.||+|.+....... ......+.+|+.+++.++||||+++++++...++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4788899999999999999998899999999887543322 1234567889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999764 4589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.... ...........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112345689999999999998899999999999999999999999988777
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
...+..+..
T Consensus 218 ~~~~~~~~~ 226 (267)
T cd06628 218 LQAIFKIGE 226 (267)
T ss_pred HHHHHHHhc
Confidence 666655544
No 214
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=7.2e-31 Score=286.98 Aligned_cols=220 Identities=21% Similarity=0.324 Sum_probs=180.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+..++|++.+.||.|+||.||++.+..++. .+++|.+... ........+..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~- 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG- 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-
Confidence 345789999999999999999999977776 4666766432 123344567788889999999999999998754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...+++|||+++++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997643 45899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..... ........|+..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDK-------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCc-------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 21100 011123457788999999998899999999999999999998 9999998
Q ss_pred CCHHHHHHHHHcCC
Q 002342 901 KTRQKTFANILHKD 914 (934)
Q Consensus 901 ~~~~~~~~~i~~~~ 914 (934)
.......+.+..+.
T Consensus 215 ~~~~~~~~~~~~~~ 228 (279)
T cd05111 215 MRPHEVPDLLEKGE 228 (279)
T ss_pred CCHHHHHHHHHCCC
Confidence 88777666665544
No 215
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=4.2e-31 Score=286.87 Aligned_cols=220 Identities=23% Similarity=0.327 Sum_probs=183.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
...|++.+.||.|+||.||+|.+..+++ .||+|.+.+.. .......+..|+.+++.++||||+++++++..+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999987664 69999987532 344557788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
++||||+++++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987643 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
... ..........++..|+|||++.+..++.++|||||||++|++++ |..||...+.
T Consensus 160 ~~~----------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSD----------------------PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred ccc----------------------cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 100 00000011112467999999999999999999999999999886 9999999888
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+....+..
T Consensus 218 ~~~~~~i~~ 226 (269)
T cd05065 218 QDVINAIEQ 226 (269)
T ss_pred HHHHHHHHc
Confidence 888877754
No 216
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=4.9e-31 Score=286.07 Aligned_cols=220 Identities=23% Similarity=0.317 Sum_probs=184.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..+.|+..+.||+|+||.||+|.++.++. .+|+|.+.... .......+.+|+++++.++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34678999999999999999999976654 79999886532 23345678899999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999987543 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
.... .........++.|+|||++.+..++.++|||||||++|+|++ |+.||...+
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred cccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 1000 000111223567999999998889999999999999999997 999999988
Q ss_pred HHHHHHHHHcC
Q 002342 903 RQKTFANILHK 913 (934)
Q Consensus 903 ~~~~~~~i~~~ 913 (934)
..+....|..+
T Consensus 216 ~~~~~~~i~~~ 226 (268)
T cd05063 216 NHEVMKAINDG 226 (268)
T ss_pred HHHHHHHHhcC
Confidence 88888888654
No 217
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=4.5e-31 Score=288.65 Aligned_cols=220 Identities=21% Similarity=0.305 Sum_probs=185.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+..+|.+.+.||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 3467899999999999999999753 35678999987643 344556788999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
+..|++|||+++++|.+++..... ..+++..+..++.||+.||+|||++|++||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 999999999999999999875421 3488999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||++....... .........+++.|+|||++.+..++.++|||||||++
T Consensus 160 ~~kL~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 160 VVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred CEEECCCCceeEcCCCc-------------------------eeecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 99999999985432110 00111233467889999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
|+|++ |.+||......+.+..+..+.
T Consensus 215 ~el~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05092 215 WEIFTYGKQPWYQLSNTEAIECITQGR 241 (280)
T ss_pred HHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence 99998 999999888888888777654
No 218
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=4.3e-31 Score=285.37 Aligned_cols=216 Identities=25% Similarity=0.352 Sum_probs=181.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|.+...||+|++|.||++.+..+ ..+|+|.+.... .....+.+|+.+++.++|||++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4456799999999999999999988555 468999876532 22356788999999999999999998875 46689
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
++|||+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
........++..|+|||.+.+..++.++|+||||+++|+|++ |.+||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112346778999999998889999999999999999999 99999998888
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+....+..+
T Consensus 211 ~~~~~~~~~ 219 (260)
T cd05069 211 EVLEQVERG 219 (260)
T ss_pred HHHHHHHcC
Confidence 888777654
No 219
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=5.6e-31 Score=284.62 Aligned_cols=214 Identities=42% Similarity=0.769 Sum_probs=185.0
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||.|++|.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.++..+|++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999989999999999876544445567789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++.+. ..++...+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~------------ 146 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG------------ 146 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc------------
Confidence 9999764 34899999999999999999999999999999999999999999999999998543211
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHc--
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILH-- 912 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~--~~~~~~~i~~-- 912 (934)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+.+..+..
T Consensus 147 ----------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 147 ----------------QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred ----------------cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 01123468899999999998889999999999999999999999998877 6777777774
Q ss_pred CCCCCCCC
Q 002342 913 KDLKFPSS 920 (934)
Q Consensus 913 ~~~~~p~~ 920 (934)
....+|..
T Consensus 211 ~~~~~~~~ 218 (262)
T cd05572 211 GKLEFPNY 218 (262)
T ss_pred CCCCCCcc
Confidence 34455543
No 220
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=6.8e-31 Score=282.79 Aligned_cols=218 Identities=25% Similarity=0.486 Sum_probs=189.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...++.|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875422 23345678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~----- 154 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST----- 154 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc-----
Confidence 999999999987654456899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||......+.+..
T Consensus 155 ----------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 155 ----------------------VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred ----------------------hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 0011234588899999999998899999999999999999999999998888888888
Q ss_pred HHcCCC
Q 002342 910 ILHKDL 915 (934)
Q Consensus 910 i~~~~~ 915 (934)
++.+.+
T Consensus 213 ~~~~~~ 218 (256)
T cd08218 213 IIRGSY 218 (256)
T ss_pred HhcCCC
Confidence 877665
No 221
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.5e-31 Score=291.24 Aligned_cols=211 Identities=27% Similarity=0.461 Sum_probs=183.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|++.+.||.|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+.+++++...+.+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ---KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc---cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 5799999999999999999999999999999998653 2234467788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|..++.. ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 99999999998864 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468899999999999889999999999999999999999999887766555
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 226 ~~~~ 229 (296)
T cd06655 226 LIAT 229 (296)
T ss_pred HHHh
Confidence 5543
No 222
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=7.8e-31 Score=287.01 Aligned_cols=212 Identities=26% Similarity=0.417 Sum_probs=179.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999875421 2223345778999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++++.|..++... ..+++..++.++.||+.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG--- 154 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc---
Confidence 999988887776543 348999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......++..|+|||++.+ ..++.++|+||||+++|+|++|.+||.+.+..+..
T Consensus 155 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 155 ------------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred ------------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01123457889999999876 45788999999999999999999999988776655
Q ss_pred HHH
Q 002342 908 ANI 910 (934)
Q Consensus 908 ~~i 910 (934)
..+
T Consensus 211 ~~~ 213 (286)
T cd07847 211 YLI 213 (286)
T ss_pred HHH
Confidence 544
No 223
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=5.8e-31 Score=289.83 Aligned_cols=219 Identities=25% Similarity=0.373 Sum_probs=184.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCC----------------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----------------~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~ 730 (934)
..++|++++.||+|+||.||++.+...+ ..||+|.+.... .......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999886543 568999987643 2345667889999999999999
Q ss_pred ccceeEEEEeCCeEEEEEEccCCCCchhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
|+++++++..++..+++|||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999987643 1258999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
|+++.++.++|+|||++....... .........+++.|+|||++.+..++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999985432110 0011224456789999999998889999999
Q ss_pred HHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHc
Q 002342 882 WALGILLYEMLY--GYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 882 wSlG~iL~ellt--G~~Pf~~~~~~~~~~~i~~ 912 (934)
|||||++|+|++ |..||...+..+.+..+..
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~ 248 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGH 248 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHh
Confidence 999999999997 8899988888777776654
No 224
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.3e-31 Score=292.50 Aligned_cols=205 Identities=25% Similarity=0.450 Sum_probs=179.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|++++.||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...++.|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233456788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.. ..+++..+..++.|++.+|.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~---- 168 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---- 168 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCC----
Confidence 99999999999865 34899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........|++.|+|||.+.+..++.++|+|||||++|+|++|.+||.+.+....
T Consensus 169 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~ 223 (297)
T cd06656 169 -----------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (297)
T ss_pred -----------------------ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence 0111234688999999999999899999999999999999999999987665433
No 225
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.6e-31 Score=289.97 Aligned_cols=205 Identities=28% Similarity=0.489 Sum_probs=179.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++++.||+|+||+||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 34578999999999999999999999999999999987532 2344567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+||||+++++|.+++... +.+++..++.++.+++.+|.|||+ .|++||||||+||+++.++.++|+|||++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~- 156 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN- 156 (284)
T ss_pred EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh-
Confidence 999999999999988764 458999999999999999999997 5999999999999999999999999998743210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
......+|+..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 157 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~ 207 (284)
T cd06620 157 ----------------------------SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207 (284)
T ss_pred ----------------------------hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccch
Confidence 011235689999999999888899999999999999999999999986554
No 226
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=4.6e-31 Score=287.42 Aligned_cols=227 Identities=20% Similarity=0.324 Sum_probs=190.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..++|++++.||.|+||.||+++.+. +.+.+++|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 34689999999999999999999754 34679999876431 233456788999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEe
Q 002342 742 THVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~D 814 (934)
+..|+||||+++++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++++|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999999976541 1589999999999999999999999999999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt- 893 (934)
||++...... .........+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 161 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 161 LSLSKDVYNS--------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred cccccccCcc--------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 9988432110 0111223356788999999988888999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 002342 894 GYTPFRGKTRQKTFANILHKDLKFPSST 921 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 921 (934)
|..||.+......+..+..+...++...
T Consensus 215 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 242 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQAGKLELPVPE 242 (275)
T ss_pred CCCCccccchHHHHHHHHcCCcCCCCCC
Confidence 8999998888888888888777666543
No 227
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=6.7e-31 Score=283.89 Aligned_cols=217 Identities=23% Similarity=0.349 Sum_probs=183.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|.+.+.||+|+||.||++.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 456789999999999999999999864 5567999987653 2234678889999999999999999999887 788
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+++|||+++++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765566889999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ........++..|+|||++....++.++|+|||||++|++++ |++||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 E--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112245678999999998889999999999999999998 9999999888
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
......+..+
T Consensus 210 ~~~~~~~~~~ 219 (260)
T cd05073 210 PEVIRALERG 219 (260)
T ss_pred HHHHHHHhCC
Confidence 8777777654
No 228
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=8.8e-31 Score=284.57 Aligned_cols=219 Identities=24% Similarity=0.328 Sum_probs=179.9
Q ss_pred cccccccccCCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------CC
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 742 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------~~ 742 (934)
|.+.+.||+|+||.||++.+..++. .+|+|.+... .........+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA-ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC-cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 4567899999999999999877765 6999988754 2344556778899999999999999999987642 23
Q ss_pred eEEEEEEccCCCCchhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
..+++|||+.+++|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 2245899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |++|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65321100 011123346778999999999999999999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHcCCC
Q 002342 898 FRGKTRQKTFANILHKDL 915 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~ 915 (934)
|.+....+.+..+.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~ 232 (272)
T cd05075 215 YPGVENSEIYDYLRQGNR 232 (272)
T ss_pred CCCCCHHHHHHHHHcCCC
Confidence 999888888888877653
No 229
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=6.5e-31 Score=292.48 Aligned_cols=224 Identities=22% Similarity=0.327 Sum_probs=185.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcccee
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~ 735 (934)
+.+..++|.+.+.||+|+||.||++.+.. ....+|+|.+.... .......+..|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34455789999999999999999998632 35579999987532 334456788899999999 699999999
Q ss_pred EEEEeCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
+++...+..|++|||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999999999999986532 2358889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
||++.++.+||+|||++........ ........+++.|||||++.+..++.++||
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 219 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDV 219 (314)
T ss_pred EEEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchh
Confidence 9999999999999999854321100 001112234568999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
|||||++|+|++ |..||.+.+..+.+..+..+.
T Consensus 220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 253 (314)
T cd05099 220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH 253 (314)
T ss_pred hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999998 999999988888888877654
No 230
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=6.9e-31 Score=285.27 Aligned_cols=218 Identities=24% Similarity=0.338 Sum_probs=180.7
Q ss_pred cccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe----
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~---- 743 (934)
|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999998654 4789999987532 234456678899999999999999999998765443
Q ss_pred --EEEEEEccCCCCchhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 744 --VCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
.+++|||+++++|..++... ....+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999888542 223589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~ 896 (934)
+........ ........++..|+|||.+.+..++.++|||||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 865321100 001112335678999999988889999999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHcCC
Q 002342 897 PFRGKTRQKTFANILHKD 914 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~ 914 (934)
||.+....+.+..+..+.
T Consensus 215 p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05035 215 PYPGVENHEIYDYLRHGN 232 (273)
T ss_pred CCCCCCHHHHHHHHHcCC
Confidence 999988888888877654
No 231
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=290.50 Aligned_cols=219 Identities=23% Similarity=0.372 Sum_probs=185.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--C----CccceeEEEEeC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--P----FVPALYASFQTK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p----~Iv~l~~~~~~~ 741 (934)
..+|++++.+|+|.||+|-.+.+..++..+|||+++.. ....+...-|+++|.++.+ | -++++.++|+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 68999999999999999999999999999999998642 2334556679999999942 3 378899999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--------------
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------- 807 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-------------- 807 (934)
++.|||+|.+ |.|+++++..+....|+.+.++.+..|++.+++|||+++++|.||||+|||+.++
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999999 8999999999888899999999999999999999999999999999999999421
Q ss_pred ------CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 808 ------GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 808 ------~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
-.|+|+|||.|..-. ....+.+.|..|.|||++.+-+++.++||
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred eccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccCc
Confidence 237899999985421 12256789999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 002342 882 WALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 921 (934)
Q Consensus 882 wSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 921 (934)
||+||||+||.+|...|++..+.+.+.++..-.-++|..+
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~m 332 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRM 332 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHH
Confidence 9999999999999999999887775444433223677653
No 232
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=7e-31 Score=286.59 Aligned_cols=199 Identities=36% Similarity=0.611 Sum_probs=172.8
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||+|+||+||+|.+..+++.||+|.+.+...........+..|+++|+.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999998765433334445567899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++.......+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~------------- 147 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG------------- 147 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-------------
Confidence 9998776545699999999999999999999999999999999999999999999999998854311
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........|+..|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 148 ---------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 199 (277)
T cd05577 148 ---------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE 199 (277)
T ss_pred ---------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence 0011233578899999999888899999999999999999999999987554
No 233
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=9.5e-31 Score=287.76 Aligned_cols=221 Identities=22% Similarity=0.313 Sum_probs=185.9
Q ss_pred cCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
..+|.+.+.||+|+||.||++.+.. ++..+++|.+... .......+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 4579999999999999999998643 4567999987643 2344466889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
..++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999986532 23488999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.++|+|||++........ ........|++.|+|||++.+..++.++|||||||++
T Consensus 161 ~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred cEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 999999999854321100 0112234578899999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKDLK 916 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 916 (934)
|+|++ |.+||...+..+.+..+..+...
T Consensus 216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd05094 216 WEIFTYGKQPWFQLSNTEVIECITQGRVL 244 (291)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHhCCCCC
Confidence 99998 99999988888888877766543
No 234
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=7.9e-31 Score=281.94 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=188.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..+++.+|+|.+..... .......+.+|+.+|+.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876533 33445778899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCcccCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|+++++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 9999999999977555568999999999999999999999999999999999999865 46899999998543211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468899999999998888999999999999999999999999988887777
Q ss_pred HHHcCCC
Q 002342 909 NILHKDL 915 (934)
Q Consensus 909 ~i~~~~~ 915 (934)
.+..+..
T Consensus 212 ~~~~~~~ 218 (256)
T cd08220 212 KIMSGTF 218 (256)
T ss_pred HHHhcCC
Confidence 7766543
No 235
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=8.5e-31 Score=282.21 Aligned_cols=213 Identities=24% Similarity=0.369 Sum_probs=180.3
Q ss_pred cccccCCcEEEEEEEEec-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEcc
Q 002342 675 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~-~~--~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
+.||+|++|.||++.+.. .+ ..||+|.+...... .....+.+|+.++++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999865 33 36999998865432 566788899999999999999999999988 8999999999
Q ss_pred CCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCc
Q 002342 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (934)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 831 (934)
++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~----- 152 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED----- 152 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc-----
Confidence 999999999775435689999999999999999999999999999999999999999999999999865421100
Q ss_pred chhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002342 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (934)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i 910 (934)
.........++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..++++.+
T Consensus 153 -------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 153 -------------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred -------------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 0011123457889999999999899999999999999999998 99999988888888877
Q ss_pred HcCC
Q 002342 911 LHKD 914 (934)
Q Consensus 911 ~~~~ 914 (934)
....
T Consensus 214 ~~~~ 217 (257)
T cd05040 214 DKEG 217 (257)
T ss_pred HhcC
Confidence 6533
No 236
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1e-30 Score=283.54 Aligned_cols=217 Identities=27% Similarity=0.392 Sum_probs=180.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCeE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~ 744 (934)
..|++.+.||+|+||.||++.+..++..||+|.+..... ........+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 369999999999999999999999999999998865422 123345678889999999999999999999875 4678
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+++|||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999999998764 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|++||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~ 215 (266)
T cd06651 160 CM------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM 215 (266)
T ss_pred cc------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH
Confidence 00 000112345889999999999988999999999999999999999999877665
Q ss_pred HHHHHHH
Q 002342 905 KTFANIL 911 (934)
Q Consensus 905 ~~~~~i~ 911 (934)
.....+.
T Consensus 216 ~~~~~~~ 222 (266)
T cd06651 216 AAIFKIA 222 (266)
T ss_pred HHHHHHh
Confidence 5554443
No 237
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=1e-30 Score=285.38 Aligned_cols=220 Identities=22% Similarity=0.332 Sum_probs=182.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..+.|.+.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34679999999999999999999987 7789999987643 2233445688899999999999999999999998
Q ss_pred CeEEEEEEccCCCCchhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEE
Q 002342 742 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 813 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~ 813 (934)
+..|+||||++|++|.+++..... ..+++..+..++.||+.||+|||++|++||||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999875421 2589999999999999999999999999999999999998755 58999
Q ss_pred ecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh
Q 002342 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt 893 (934)
|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999864321100 001112234568999999999999999999999999999996
Q ss_pred -CCCCCCCCCHHHHHHHHHcC
Q 002342 894 -GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 894 -G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|..||.+.+..+....+...
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcC
Confidence 99999998888877766543
No 238
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=6.7e-31 Score=287.12 Aligned_cols=213 Identities=34% Similarity=0.619 Sum_probs=171.5
Q ss_pred ccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHH---HHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~---~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
.||+|+||.||++.+..+++.||+|.+.+..............|. .+++..+||+|+.+++++...+..|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765433222222233343 34455689999999999999999999999999
Q ss_pred CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
|++|..++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988654 45999999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHH
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFA 908 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~---~~~~~~~ 908 (934)
.....+|+..|+|||++.+. .++.++|+|||||++|+|++|+.||.+. .......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 11234689999999999754 6888999999999999999999999876 3344444
Q ss_pred HHHcCCCCCCC
Q 002342 909 NILHKDLKFPS 919 (934)
Q Consensus 909 ~i~~~~~~~p~ 919 (934)
.+......+|.
T Consensus 210 ~~~~~~~~~~~ 220 (278)
T cd05606 210 MTLTMAVELPD 220 (278)
T ss_pred HhhccCCCCCC
Confidence 44444555554
No 239
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=7.8e-31 Score=287.44 Aligned_cols=209 Identities=33% Similarity=0.500 Sum_probs=177.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||++.+..++..||+|.+... ........+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 4799999999999999999999999999999988653 13344567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 749 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--- 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--- 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---
Confidence 9999999998886531 2358999999999999999999997 5999999999999999999999999998843211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC------CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.......|++.|+|||++.+.. ++.++|+|||||++|+|++|+.||..
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 156 --------------------------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred --------------------------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 0112345888999999986543 47799999999999999999999987
Q ss_pred CCHHHHHH
Q 002342 901 KTRQKTFA 908 (934)
Q Consensus 901 ~~~~~~~~ 908 (934)
......+.
T Consensus 210 ~~~~~~~~ 217 (286)
T cd06622 210 ETYANIFA 217 (286)
T ss_pred cchhhHHH
Confidence 65554443
No 240
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=5.2e-31 Score=288.19 Aligned_cols=213 Identities=29% Similarity=0.453 Sum_probs=178.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEE------e
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ------T 740 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~------~ 740 (934)
.+.|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++.+ +||||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 46899999999999999999999999999999998653 23345678899999998 7999999999985 3
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+.+|++|||+.+++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 46889999999999999999776556689999999999999999999999999999999999999999999999999853
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
.... ........|++.|+|||++. ...++.++|+|||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 2100 01123456899999999986 356788999999999999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 002342 896 TPFRGKTRQKTFANIL 911 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~ 911 (934)
+||........+..+.
T Consensus 224 ~p~~~~~~~~~~~~~~ 239 (282)
T cd06636 224 PPLCDMHPMRALFLIP 239 (282)
T ss_pred CCccccCHHhhhhhHh
Confidence 9998766555444443
No 241
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=5.2e-30 Score=321.57 Aligned_cols=407 Identities=10% Similarity=0.049 Sum_probs=299.5
Q ss_pred ceEEecccCCCCCCCCCCcccCCCCCceEEEecccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchH
Q 002342 141 QAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAG 220 (934)
Q Consensus 141 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a 220 (934)
.|+........+.+|. ....+++.|||++|++|++|+++++.|+.++++++++++++|. +|+|+++|++
T Consensus 164 ~~~~~~~~~~~~~~g~--------~~~~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~ 232 (807)
T PRK13560 164 RFIDCCLRFERHAHAD--------DQVDGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDA 232 (807)
T ss_pred cEEEEEeeeeecCCCc--------eEEEEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHH
Confidence 4665544444433332 2356777999999999999999999999999999999999998 7779999999
Q ss_pred HHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEe--eeeecCCCCEEEEEE
Q 002342 221 FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIG 298 (934)
Q Consensus 221 ~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~--~pi~d~~G~v~~~v~ 298 (934)
+++++||+.+|++|+++..+.++.............+..+.....+.+.+++||+.+|+.+.+ .|+.|.+|.+.++++
T Consensus 233 ~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~ 312 (807)
T PRK13560 233 ACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVG 312 (807)
T ss_pred HHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEE
Confidence 999999999999999988777666544444455556666777778888899999999776654 566789999999999
Q ss_pred EEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcc-cccCCCCchhhhccc
Q 002342 299 MQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPI-IRKSEGGVEEERAGA 376 (934)
Q Consensus 299 ~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 376 (934)
+++|||++|++|++|+... +.+..+..+.. .....+.......+ +...+..+|+..+++
T Consensus 313 ~~~DITerk~~e~~L~~se-------------------~~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~ 373 (807)
T PRK13560 313 AITDISGRRAAERELLEKE-------------------DMLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEV 373 (807)
T ss_pred EEEechHHHHHHHHHHHHH-------------------HHHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHH
Confidence 9999999999999987321 11122222222 23333444444444 344667899999999
Q ss_pred ccCCCCCCCCCCCCCC--CCCCc------------------ccccccccccchhcccccccccccccccccccCCCCCCC
Q 002342 377 LGRRKSENVPPPRRNS--YGGGC------------------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDS 436 (934)
Q Consensus 377 ~g~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (934)
.|+......++..... ..... ......+.........++|...|+.....+..+.++...
T Consensus 374 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~ 453 (807)
T PRK13560 374 MGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNII 453 (807)
T ss_pred cCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEE
Confidence 9998776544311100 00000 111112223344455677777777777777766666544
Q ss_pred ccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhc
Q 002342 437 FENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEIL 516 (934)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEli 516 (934)
+... ...|||+|++.|++++. .+.++++++++++..+..+ +..+.+|.....++||++++++
T Consensus 454 ~~~~-------------~~~DITerk~~E~~L~~---~~~~~e~~~~~i~~~~~~~--~~~~~~~~~~~~~~G~~~~e~~ 515 (807)
T PRK13560 454 GAIA-------------LLVDITERKQVEEQLLL---ANLIVENSPLVLFRWKAEE--GWPVELVSKNITQFGYEPDEFI 515 (807)
T ss_pred EEEE-------------EeehhhhHHHHHHHHHH---HHHHHhcCCceEEEEecCC--CceEEEecchhhhcCCCHHHhh
Confidence 3333 36899999999999987 5788999999999887652 2255566666788999999998
Q ss_pred CC--CCcccCCCCCCHHHHHHHHHHHhcC-CcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 517 GR--NCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 517 G~--~~~~l~~~~~~~~~~~~i~~~l~~~-~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
+. .+..+++|++.......+...+..+ ..+..|+++.+++|..+|+.....|++|.+|.+.+++|+++|||++|++|
T Consensus 516 ~~~~~~~~~~~p~d~~~~~~~~~~~~~~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE 595 (807)
T PRK13560 516 SGKRMFAAIIHPADLEQVAAEVAEFAAQGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAE 595 (807)
T ss_pred cccchHhhhcChhhHHHHHHHHHHHHhcCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHH
Confidence 63 3556778888777776666666555 45788999999999999999999999999999999999999999999975
Q ss_pred cc
Q 002342 594 RN 595 (934)
Q Consensus 594 ~~ 595 (934)
.+
T Consensus 596 ~~ 597 (807)
T PRK13560 596 EK 597 (807)
T ss_pred HH
Confidence 43
No 242
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=7.5e-31 Score=295.75 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=176.5
Q ss_pred cccCCcccccccccCCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~ 739 (934)
+..++|++.+.||.|+||.||+|.+ ..+++.||||.+.... .......+.+|+.+|..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 4557899999999999999999985 3467899999987542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEEccCCCCchhhhccCC------------------------------------------------------
Q 002342 740 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (934)
Q Consensus 740 ~-~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (934)
. +..+++|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 5 456899999999999999886431
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 765 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 765 -----------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-------
Confidence 12367788889999999999999999999999999999999999999999999854321100
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHH
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK-TFANIL 911 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~-~~~~i~ 911 (934)
........+++.|+|||++.+..++.++||||||+++|+|++ |..||.+..... ....+.
T Consensus 235 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 235 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred ------------------hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 001122346678999999999999999999999999999996 999998765443 333443
Q ss_pred cC
Q 002342 912 HK 913 (934)
Q Consensus 912 ~~ 913 (934)
.+
T Consensus 297 ~~ 298 (343)
T cd05103 297 EG 298 (343)
T ss_pred cc
Confidence 33
No 243
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=1.3e-30 Score=286.37 Aligned_cols=217 Identities=22% Similarity=0.329 Sum_probs=179.6
Q ss_pred CcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
+|++.+.||+|+||.||++.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 48899999999999999998753 23579999886542 234456788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 745 CLITDYCPGGELFLLLDRQ----------------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~----------------------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
+++|||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999987542 113478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
|+++++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 999999999999999854321100 0011223467789999999988899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|||+++|+|++ |.+||.+....++...+..+
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 245 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG 245 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence 99999999998 99999988887777666543
No 244
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=1e-30 Score=285.90 Aligned_cols=196 Identities=37% Similarity=0.681 Sum_probs=163.0
Q ss_pred ccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHH---hCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~---~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
.||+|+||.||++.+..+++.||+|.+.+.............+|..+++ ..+||||+.+++++..++..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999987654333332233444544444 3479999999999999999999999999
Q ss_pred CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
+++|.+++..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999988764 35999999999999999999999999999999999999999999999999998432110
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
......|++.|+|||.+. +..++.++|+|||||++|+|++|..||.+..
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 200 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCC
Confidence 111236899999999986 4568899999999999999999999997543
No 245
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.9e-30 Score=280.12 Aligned_cols=213 Identities=42% Similarity=0.750 Sum_probs=181.1
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++ ...+|||++++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999999999999998764332333334445555544 455899999999999999999999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 3589999999999999999999999999999999999999999999999998743210
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
.....|++.|+|||.+.+..++.++||||||+++|+|++|.+||...+....+..+..+
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12346889999999998888899999999999999999999999998888888888877
Q ss_pred CCCCCCC
Q 002342 914 DLKFPSS 920 (934)
Q Consensus 914 ~~~~p~~ 920 (934)
...+|..
T Consensus 209 ~~~~~~~ 215 (260)
T cd05611 209 RINWPEE 215 (260)
T ss_pred ccCCCCc
Confidence 7665543
No 246
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=8.4e-31 Score=282.70 Aligned_cols=224 Identities=44% Similarity=0.813 Sum_probs=190.9
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||.|+||.||++.+..+++.|++|.+.+...........+.+|+.+++.++||||+++++.+......|++|||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999998765444445667888999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++.+.. .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99997653 589999999999999999999999999999999999999999999999999854321111000
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (934)
...........++..|+|||.+....++.++|+||||+++|+|++|..||......+.+..+..+.+.
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888899999999999999999999999999999999888887777
Q ss_pred CCCCC
Q 002342 917 FPSST 921 (934)
Q Consensus 917 ~p~~~ 921 (934)
+|...
T Consensus 220 ~~~~~ 224 (265)
T cd05579 220 WPEDV 224 (265)
T ss_pred CCccc
Confidence 77654
No 247
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1e-30 Score=293.55 Aligned_cols=225 Identities=23% Similarity=0.336 Sum_probs=186.1
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccce
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l 734 (934)
.+.+...+|++.+.||+|+||.||+|++... +..||+|.+... ........+.+|+.+++++ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 4556667899999999999999999987532 237899988743 2334456788999999999 89999999
Q ss_pred eEEEEeCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 002342 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (934)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~ 800 (934)
++++...+.+|++|||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999987532 234778888999999999999999999999999999
Q ss_pred CEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhH
Q 002342 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (934)
Q Consensus 801 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~D 880 (934)
|||++.++.+||+|||++........ ........+++.|+|||++.+..++.++|
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhh
Confidence 99999999999999999854321100 00111223467899999999999999999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 881 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 881 iwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
||||||++|+|++ |..||.+.+..+.+..+..+.
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 253 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH 253 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999999998 999999998888888876653
No 248
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2e-30 Score=315.33 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+++|.+++.||+|+||.||++.+..+++.||||++.+...........+..|+.+++.++||||+++++++...+++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999875555556667888999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
|||+.|++|.+++... +.+++..++.|+.||+.||.|||.+|||||||||+|||++.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999998764 4589999999999999999999999999999999999999999999999999874
No 249
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=2.4e-30 Score=282.38 Aligned_cols=212 Identities=29% Similarity=0.433 Sum_probs=183.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|+..+.||.|+||.||++.+..++..||+|++.... .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46889999999999999999999999999999987532 2345577889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++|++|.+++.. ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~---- 154 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---- 154 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC----
Confidence 99999999999865 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........++..|+|||++.+..++.++|+|||||++|+|++|.+||...+......
T Consensus 155 -----------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 155 -----------------------QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred -----------------------ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 011123468889999999998889999999999999999999999998877766665
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 212 ~~~~ 215 (277)
T cd06640 212 LIPK 215 (277)
T ss_pred hhhc
Confidence 5533
No 250
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=2.6e-30 Score=278.41 Aligned_cols=212 Identities=24% Similarity=0.370 Sum_probs=184.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.+.||.|+||.||++.. .++.||+|.+.... .....+.+|+.+++.++|+||+++++++.+.+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 47899999987542 24567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999997765456999999999999999999999999999999999999999999999999998543100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
.....++..|+|||++....++.++|+||||+++|+|++ |..||...+..
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 011234567999999998889999999999999999997 99999988887
Q ss_pred HHHHHHHcC
Q 002342 905 KTFANILHK 913 (934)
Q Consensus 905 ~~~~~i~~~ 913 (934)
+....+..+
T Consensus 207 ~~~~~~~~~ 215 (256)
T cd05039 207 DVVPHVEKG 215 (256)
T ss_pred HHHHHHhcC
Confidence 777766554
No 251
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=5.6e-31 Score=288.14 Aligned_cols=212 Identities=23% Similarity=0.417 Sum_probs=175.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999999875422 22233456789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~----- 152 (284)
T cd07839 80 YCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP----- 152 (284)
T ss_pred cCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-----
Confidence 995 67888776542 45999999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC-CCCCCHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP-FRGKTRQKTF 907 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P-f~~~~~~~~~ 907 (934)
........+++.|+|||++.+. .++.++|||||||++|+|++|..| |.+.+..+.+
T Consensus 153 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 153 ----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred ----------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 0111233578899999998775 468899999999999999998777 5556655655
Q ss_pred HHHH
Q 002342 908 ANIL 911 (934)
Q Consensus 908 ~~i~ 911 (934)
+.+.
T Consensus 211 ~~~~ 214 (284)
T cd07839 211 KRIF 214 (284)
T ss_pred HHHH
Confidence 5553
No 252
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=1.9e-30 Score=280.97 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=182.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc---cChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~---~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+|++.+.||.|+||.||++.+ .+++.+|+|.+..... ........+.+|+.+|+.++|+||+++++++...+..|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999986 5788999998864321 122334568889999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
+|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3489999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
. ...........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 H---------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred c---------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 0 0001112345689999999999999999999999999999999999999988776655
Q ss_pred HHHHHcC
Q 002342 907 FANILHK 913 (934)
Q Consensus 907 ~~~i~~~ 913 (934)
...+...
T Consensus 217 ~~~~~~~ 223 (265)
T cd06631 217 MFYIGAH 223 (265)
T ss_pred HHHhhhc
Confidence 5555444
No 253
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=1.7e-30 Score=279.70 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=183.7
Q ss_pred cccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEcc
Q 002342 675 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
+.||+|+||.||++.+... +..|++|.+..... ......+.+|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999866 88999999876532 224678889999999999999999999999999999999999
Q ss_pred CCCCchhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 752 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 752 ~ggsL~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
++++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999997641 256999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
.. ........+++.|+|||.+....++.++|+|||||++|+|++ |..||.+...
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 10 112234467889999999998889999999999999999998 6999999988
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
.+....+..+
T Consensus 214 ~~~~~~~~~~ 223 (262)
T cd00192 214 EEVLEYLRKG 223 (262)
T ss_pred HHHHHHHHcC
Confidence 8888888764
No 254
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=8.1e-31 Score=288.93 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=179.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecC--------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccc
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA 733 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~--------------~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~ 733 (934)
.++|++.+.||+|+||.||++.+..+ ...||+|.+.... .......+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 46899999999999999999987543 2358999987542 3344567889999999999999999
Q ss_pred eeEEEEeCCeEEEEEEccCCCCchhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002342 734 LYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 803 (934)
Q Consensus 734 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NIL 803 (934)
+++++...+..|+||||+.+++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999885431 123688899999999999999999999999999999999
Q ss_pred EecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHH
Q 002342 804 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 883 (934)
Q Consensus 804 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwS 883 (934)
++.++.+||+|||++....... .........+++.|+|||++.+..++.++|+||
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred EcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 9999999999999985432100 001122334678999999999989999999999
Q ss_pred HHHHHHHHHh--CCCCCCCCCHHHHHHHHH
Q 002342 884 LGILLYEMLY--GYTPFRGKTRQKTFANIL 911 (934)
Q Consensus 884 lG~iL~ellt--G~~Pf~~~~~~~~~~~i~ 911 (934)
|||++|+|++ |..||...+..+.+..+.
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~ 246 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTG 246 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHHHHHHH
Confidence 9999999987 788998887777665553
No 255
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=1.7e-30 Score=283.84 Aligned_cols=219 Identities=23% Similarity=0.321 Sum_probs=184.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
...+|++.+.||+|+||.||++.++.++. .+|+|.+.+.. .......+.+|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 45789999999999999999999877664 68999876542 24455678899999999999999999999887 7
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..++||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 8999999999999999987653 348999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
..... .......++..|+|||.+....++.++|+|||||++|++++ |+.||.+.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 161 VDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred Ccccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 11000 00011224678999999988889999999999999999998 99999998
Q ss_pred CHHHHHHHHHcCC
Q 002342 902 TRQKTFANILHKD 914 (934)
Q Consensus 902 ~~~~~~~~i~~~~ 914 (934)
...++...+..+.
T Consensus 216 ~~~~~~~~~~~~~ 228 (279)
T cd05057 216 PAVEIPDLLEKGE 228 (279)
T ss_pred CHHHHHHHHhCCC
Confidence 8888887776643
No 256
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=1.5e-30 Score=281.43 Aligned_cols=220 Identities=27% Similarity=0.422 Sum_probs=188.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..++..+|+|++...... .....+.+|+.+|+.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4799999999999999999999889999999998754322 25677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+++++|.+++..... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976432 46899999999999999999999999999999999999999999999999998654321110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.........|+..|+|||++... .++.++|+|||||++|+|++|+.||...+....
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00122345689999999999877 788899999999999999999999998887777
Q ss_pred HHHHHcC
Q 002342 907 FANILHK 913 (934)
Q Consensus 907 ~~~i~~~ 913 (934)
+..+..+
T Consensus 216 ~~~~~~~ 222 (267)
T cd06610 216 LMLTLQN 222 (267)
T ss_pred HHHHhcC
Confidence 7766654
No 257
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=1.3e-30 Score=286.17 Aligned_cols=222 Identities=22% Similarity=0.331 Sum_probs=185.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999999753 67899999987542 234456788899999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 742 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
...|++|||+++++|.+++.... ...+++..+..++.||+.||.|||.+|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999986421 1247888899999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
|+++.++.++|+|||++....... .........+++.|+|||.+.+..++.++||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSAD-------------------------YYKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCc-------------------------cccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 999999999999999985321100 0011122235678999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
|||||++|+|++ |..||.+.+..+....+..+..
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~ 250 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV 250 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence 999999999997 9999999888888888877654
No 258
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=1.2e-30 Score=286.71 Aligned_cols=204 Identities=27% Similarity=0.426 Sum_probs=173.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++.+.||.|++|.||++.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++...++.|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999998999999999875422 11223466899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+. ++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 156 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--- 156 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---
Confidence 99996 58999887643 35899999999999999999999999999999999999999999999999998432100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
........+++.|+|||++.+ ..++.++||||||+++|+|++|++||.+..
T Consensus 157 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 157 ------------------------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred ------------------------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 001112346889999999876 457889999999999999999999998765
No 259
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=5.9e-31 Score=289.75 Aligned_cols=211 Identities=27% Similarity=0.481 Sum_probs=181.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.|.....||.|+||.||++.+..++..||||.+... .......+.+|+.+++.++||||+++++.+...++.|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 4566678899999999999999999999999988643 2344566889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---- 171 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---- 171 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc----
Confidence 99999999998754 34899999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|+.||.+.+....+.
T Consensus 172 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 228 (292)
T cd06658 172 -----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR 228 (292)
T ss_pred -----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223568999999999998889999999999999999999999999888777666
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 229 ~~~~ 232 (292)
T cd06658 229 RIRD 232 (292)
T ss_pred HHHh
Confidence 6554
No 260
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=9.1e-31 Score=281.73 Aligned_cols=209 Identities=22% Similarity=0.368 Sum_probs=178.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||.|+||.||++.. +++.||+|.+.... ....+.+|+.+++.++||||+++++++... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 457899999999999999999874 78889999886431 235678899999999999999999998764 5799
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+.+++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~--- 152 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM--- 152 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc---
Confidence 99999999999999776555689999999999999999999999999999999999999999999999998843210
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~ 905 (934)
.......+..|+|||.+.+..++.++|+|||||++|+|++ |++||.+.+..+
T Consensus 153 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 205 (254)
T cd05083 153 ---------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE 205 (254)
T ss_pred ---------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence 0011234568999999998889999999999999999997 999999988888
Q ss_pred HHHHHHcC
Q 002342 906 TFANILHK 913 (934)
Q Consensus 906 ~~~~i~~~ 913 (934)
....+..+
T Consensus 206 ~~~~~~~~ 213 (254)
T cd05083 206 VKECVEKG 213 (254)
T ss_pred HHHHHhCC
Confidence 77777665
No 261
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=1.6e-30 Score=284.54 Aligned_cols=214 Identities=28% Similarity=0.471 Sum_probs=183.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++..+...|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999999999999999876432 23345678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+ +++|.+++.... ..+++..++.++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~---- 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE---- 153 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC----
Confidence 99 999999986543 559999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+.
T Consensus 154 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 154 ----------------------PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred ----------------------CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 0112234689999999998654 45889999999999999999999999888877776
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 212 ~~~~ 215 (286)
T cd07832 212 IVFR 215 (286)
T ss_pred HHHH
Confidence 6654
No 262
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=3.1e-30 Score=280.00 Aligned_cols=218 Identities=21% Similarity=0.339 Sum_probs=172.2
Q ss_pred cccccCCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
+.||+|+||.||++.... ....+|+|.+.... .......+.+|+.+++.++||||+++++++......|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999996533 34578888775432 33344567889999999999999999999999999999999999
Q ss_pred CCCchhhhccCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 753 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 753 ggsL~~~l~~~~~---~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
+++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999876432 2356788899999999999999999999999999999999999999999999843211000
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
........+++.|+|||++.. ..++.++|||||||++|+|++ |.+||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123346788999999853 356779999999999999998 89999888
Q ss_pred CHHHHHHHHHc-CCCCCCC
Q 002342 902 TRQKTFANILH-KDLKFPS 919 (934)
Q Consensus 902 ~~~~~~~~i~~-~~~~~p~ 919 (934)
...+.+..+.. +...+|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05042 214 SDEQVLKQVVREQDIKLPK 232 (269)
T ss_pred CHHHHHHHHhhccCccCCC
Confidence 87777666554 3334443
No 263
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=6.2e-31 Score=298.00 Aligned_cols=195 Identities=27% Similarity=0.423 Sum_probs=168.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
...+|++++.||+|+||.||++.+..++..||+|+..+. ....|+.+++.++||||+++++++......|+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999985543 23468999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+ .++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 67888888654 345999999999999999999999999999999999999999999999999998532110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
.......||+.|+|||++.+..++.++|||||||++|+|++ +.++|..
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~ 259 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFED 259 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccC
Confidence 11123569999999999999999999999999999999997 5555543
No 264
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=3e-30 Score=284.04 Aligned_cols=214 Identities=22% Similarity=0.365 Sum_probs=179.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+++++.++||||+++++++....+.|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 2233456788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+ +++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++......
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~--- 156 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP--- 156 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC---
Confidence 999 568888876655555788999999999999999999999999999999999985 567999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........|++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 157 ------------------------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred ------------------------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0111233578899999998764 578899999999999999999999998877766
Q ss_pred HHHHH
Q 002342 907 FANIL 911 (934)
Q Consensus 907 ~~~i~ 911 (934)
+.++.
T Consensus 213 ~~~~~ 217 (294)
T PLN00009 213 LFKIF 217 (294)
T ss_pred HHHHH
Confidence 65553
No 265
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1.1e-30 Score=286.06 Aligned_cols=213 Identities=29% Similarity=0.422 Sum_probs=179.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||+|+||.||++.+..+++.||+|.+.+... .......+.+|+++++.++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 479999999999999999999998999999999876432 2234456788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|..+.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~---- 153 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---- 153 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC----
Confidence 999998888876543 34899999999999999999999999999999999999999999999999998543110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........|+..|+|||++.+ ..++.++||||||+++|+|++|++||.+.+..+..
T Consensus 154 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 154 -----------------------GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred -----------------------ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 011123468899999999976 44678999999999999999999999887766655
Q ss_pred HHHH
Q 002342 908 ANIL 911 (934)
Q Consensus 908 ~~i~ 911 (934)
..+.
T Consensus 211 ~~~~ 214 (286)
T cd07846 211 YHII 214 (286)
T ss_pred HHHH
Confidence 5544
No 266
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=2.2e-30 Score=279.22 Aligned_cols=211 Identities=23% Similarity=0.344 Sum_probs=175.8
Q ss_pred cccccCCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEcc
Q 002342 675 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
+.||+|+||.||++.+..++ ..||+|.+...... .....+.+|+.+++.++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999886655 78999998765332 44567889999999999999999999876 45689999999
Q ss_pred CCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCc
Q 002342 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (934)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 831 (934)
.+++|.+++.... .+++..+..++.|++.+|.|||.+|++|+||||+|||++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~----- 150 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD----- 150 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc-----
Confidence 9999999997653 589999999999999999999999999999999999999999999999999864321100
Q ss_pred chhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002342 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (934)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i 910 (934)
.........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+
T Consensus 151 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 151 -------------------YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred -------------------ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 0001111234578999999999999999999999999999997 99999988888887777
Q ss_pred HcCC
Q 002342 911 LHKD 914 (934)
Q Consensus 911 ~~~~ 914 (934)
..+.
T Consensus 212 ~~~~ 215 (257)
T cd05060 212 ESGE 215 (257)
T ss_pred HcCC
Confidence 6553
No 267
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=2e-30 Score=285.97 Aligned_cols=214 Identities=27% Similarity=0.404 Sum_probs=181.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+|++.+.||.|+||.||++.+..+++.||+|.+...... .......+..|+.+++.++|+||+++++++.+.+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488999999999999999999999999999999865432 122345567899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997653 369999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..+.
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356888999999865 4578899999999999999999999998887777
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+.++..
T Consensus 212 ~~~~~~ 217 (298)
T cd07841 212 LGKIFE 217 (298)
T ss_pred HHHHHH
Confidence 666653
No 268
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=1.7e-30 Score=286.82 Aligned_cols=212 Identities=28% Similarity=0.469 Sum_probs=181.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|.....||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 34566678999999999999999999999999986532 223456788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|..++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999988754 34899999999999999999999999999999999999999999999999988432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......+|++.|+|||++.+..++.++|+|||||++|+|++|++||...+..+.+.
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224568999999999999899999999999999999999999999888777776
Q ss_pred HHHcC
Q 002342 909 NILHK 913 (934)
Q Consensus 909 ~i~~~ 913 (934)
.+...
T Consensus 228 ~~~~~ 232 (297)
T cd06659 228 RLRDS 232 (297)
T ss_pred HHhcc
Confidence 66543
No 269
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=2.6e-30 Score=279.04 Aligned_cols=211 Identities=23% Similarity=0.345 Sum_probs=173.9
Q ss_pred ccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCC
Q 002342 676 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 753 (934)
.||+|+||.||++.+. ..+..||+|++.... .......+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 4899999999999775 445679999987542 34445678899999999999999999998864 578999999999
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
++|.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~------ 151 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY------ 151 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc------
Confidence 9999998654 245899999999999999999999999999999999999999999999999998543211000
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHc
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (934)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 152 ------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred ------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 000111234678999999998889999999999999999996 9999999888888877766
Q ss_pred CC
Q 002342 913 KD 914 (934)
Q Consensus 913 ~~ 914 (934)
+.
T Consensus 214 ~~ 215 (257)
T cd05115 214 GK 215 (257)
T ss_pred CC
Confidence 54
No 270
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=3.1e-30 Score=277.32 Aligned_cols=209 Identities=29% Similarity=0.479 Sum_probs=182.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++||||+++++++....+.|++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999987532 2567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+.+++|.+++.... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~---- 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT---- 152 (256)
T ss_pred ecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC----
Confidence 9999999999986542 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|+..|+|||++.+..++.++||||||+++|+|++|++||..........
T Consensus 153 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 153 -----------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred -----------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 011223458889999999999999999999999999999999999998776655444
Q ss_pred HH
Q 002342 909 NI 910 (934)
Q Consensus 909 ~i 910 (934)
.+
T Consensus 210 ~~ 211 (256)
T cd06612 210 MI 211 (256)
T ss_pred hh
Confidence 43
No 271
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=2.1e-30 Score=293.30 Aligned_cols=210 Identities=27% Similarity=0.492 Sum_probs=178.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++.+.||+|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999986532 2334445677899999999999999999998643
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...|+||||+ +++|.+.+... ++...+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887542 899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 210 0112346889999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHH
Q 002342 902 TRQKTFANIL 911 (934)
Q Consensus 902 ~~~~~~~~i~ 911 (934)
+....+..+.
T Consensus 221 ~~~~~~~~~~ 230 (353)
T cd07850 221 DHIDQWNKII 230 (353)
T ss_pred CHHHHHHHHH
Confidence 7766665554
No 272
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=314.35 Aligned_cols=230 Identities=23% Similarity=0.370 Sum_probs=194.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
+....-++.+.||+|.||.||.+...... ..||+|.+.+. .+.+....|.+|..+|+.++|||||++++++-+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 34567788899999999999999886532 34999988764 366778899999999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
....+|++|||+||+|..+|+.. ....++......++.+|++|+.||+++++|||||..+|+|++....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999864 1345899999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-C
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G 894 (934)
|+|+.+...... +......-...|||||.+..+.++.++|||||||+|||+++ |
T Consensus 847 GlArDiy~~~yy-------------------------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 847 GLARDIYDKDYY-------------------------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred chhHhhhhchhe-------------------------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 999743221110 00011123468999999999999999999999999999997 9
Q ss_pred CCCCCCCCHHHHHHHHH-cCCCCCCCCCC
Q 002342 895 YTPFRGKTRQKTFANIL-HKDLKFPSSTP 922 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~ 922 (934)
..||.+.++.+++...+ .|.++.|.+.|
T Consensus 902 ~~PY~~~~n~~v~~~~~~ggRL~~P~~CP 930 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGGRLDPPSYCP 930 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCCccCCCCCCC
Confidence 99999999999998555 56677777764
No 273
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.2e-30 Score=282.29 Aligned_cols=243 Identities=35% Similarity=0.612 Sum_probs=199.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV 747 (934)
++|.+.+.||.|+||.||++.+..+++.||+|++.+...........+.+|..+++.++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998754444555677889999999998 99999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+.+++|.+++... ..++...++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999775 35999999999999999999999999999999999999999999999999998654322211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
....... ..................|+..|+|||++.+..++.++|+||||+++|++++|..||...+....+
T Consensus 159 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDA-------TNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCC-------ccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 0000000 000000011123345567899999999999888899999999999999999999999988887888
Q ss_pred HHHHcCCCCCCCC
Q 002342 908 ANILHKDLKFPSS 920 (934)
Q Consensus 908 ~~i~~~~~~~p~~ 920 (934)
+.+......+|..
T Consensus 232 ~~~~~~~~~~~~~ 244 (280)
T cd05581 232 QKILKLEYSFPPN 244 (280)
T ss_pred HHHHhcCCCCCCc
Confidence 8887777666653
No 274
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=1.9e-30 Score=286.15 Aligned_cols=216 Identities=26% Similarity=0.389 Sum_probs=178.1
Q ss_pred cCCcccccccccCCcEEEEEEEEec----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I 731 (934)
.++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+.+|+.+|+.++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999986532 34579999987532 34445678899999999999999
Q ss_pred cceeEEEEeCCeEEEEEEccCCCCchhhhccCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
+++++++...+..|+||||+++++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999875321 2477889999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
|++.++.++|+|||++....... .........+++.|++||+..+..++.++|+|
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc-------------------------ceeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 99999999999999985432110 00111223456789999999888899999999
Q ss_pred HHHHHHHHHHh--CCCCCCCCCHHHHHHHH
Q 002342 883 ALGILLYEMLY--GYTPFRGKTRQKTFANI 910 (934)
Q Consensus 883 SlG~iL~ellt--G~~Pf~~~~~~~~~~~i 910 (934)
||||++|+|++ |..||...+..+.+...
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~ 246 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENT 246 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 99999999998 88999887776665543
No 275
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=2.8e-30 Score=280.76 Aligned_cols=209 Identities=25% Similarity=0.377 Sum_probs=174.8
Q ss_pred cccccCCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEEEcc
Q 002342 675 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
+.||+|+||.||++.+..++. .+++|.+... ........+.+|+.++..+ +||||+++++++...+..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999999988775 4688887642 2344556788999999999 8999999999999999999999999
Q ss_pred CCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 752 PGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 752 ~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
++++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999986532 13478999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~ 896 (934)
+..... .........++.|+|||++....++.++|+|||||++|+|++ |..
T Consensus 159 ~~~~~~----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~ 210 (270)
T cd05047 159 SRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 210 (270)
T ss_pred ccccch----------------------------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 732100 000111234667999999998889999999999999999996 999
Q ss_pred CCCCCCHHHHHHHHHcC
Q 002342 897 PFRGKTRQKTFANILHK 913 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~~ 913 (934)
||.+.+..+.+..+..+
T Consensus 211 pf~~~~~~~~~~~~~~~ 227 (270)
T cd05047 211 PYCGMTCAELYEKLPQG 227 (270)
T ss_pred CccccCHHHHHHHHhCC
Confidence 99988888888777654
No 276
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=3.4e-30 Score=277.15 Aligned_cols=213 Identities=29% Similarity=0.454 Sum_probs=182.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+|+..+.||+|+||+||++.+..++..|++|.+..... ........+.+|+.+++.++||||+++++++.....+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47888999999999999999988999999999875322 1234556788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~--- 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF--- 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc---
Confidence 9999999999998764 34899999999999999999999999999999999999999999999999988543110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......|++.|+|||.+.... ++.++|+|||||++|+|++|++||........
T Consensus 156 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 156 -------------------------SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred -------------------------ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 0123456889999999998776 88999999999999999999999987765555
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
...+..
T Consensus 211 ~~~~~~ 216 (258)
T cd06632 211 VFKIGR 216 (258)
T ss_pred HHHHHh
Confidence 555443
No 277
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=326.75 Aligned_cols=235 Identities=27% Similarity=0.471 Sum_probs=197.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.-+++....||.|.||.||-+.+..+|...|+|-++.... .......+.+|..+|..++|||+|++|++-...+.++|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~-~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS-DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc-ccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 3467888899999999999999999999999998876433 355667788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||.+|+|.+++.. ++..++...+.+..|++.|+.|||+.|||||||||.||+++.+|-+|++|||.|.........
T Consensus 1313 MEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred HHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 999999999999976 356889999999999999999999999999999999999999999999999999765432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCH-
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~s~~~DiwSlG~iL~elltG~~Pf~~~~~- 903 (934)
. .+......||+.|||||++.+. +..-+.|||||||++.||+||+.||...+.
T Consensus 1391 ~-----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne 1447 (1509)
T KOG4645|consen 1391 M-----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE 1447 (1509)
T ss_pred C-----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch
Confidence 0 0233466899999999999764 456689999999999999999999986444
Q ss_pred HHHHHHHHcCC-CCCCCCCCCCcccCCC
Q 002342 904 QKTFANILHKD-LKFPSSTPSSCKAANV 930 (934)
Q Consensus 904 ~~~~~~i~~~~-~~~p~~~~~s~~~k~l 930 (934)
-.++-.+-.|. .++|.. .|...+||
T Consensus 1448 ~aIMy~V~~gh~Pq~P~~--ls~~g~dF 1473 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHKPQIPER--LSSEGRDF 1473 (1509)
T ss_pred hHHHhHHhccCCCCCchh--hhHhHHHH
Confidence 46666665555 588876 57666665
No 278
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.9e-30 Score=283.00 Aligned_cols=212 Identities=28% Similarity=0.426 Sum_probs=182.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|+..+.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 45888999999999999999998999999999987542 2334567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+++++|.+++.. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~---- 154 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---- 154 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc----
Confidence 99999999998864 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........|+..|+|||++.+..++.++|+|||||++|+|++|++||..........
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 155 -----------------------QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred -----------------------chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 001123468899999999999999999999999999999999999998766665555
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 212 ~~~~ 215 (277)
T cd06642 212 LIPK 215 (277)
T ss_pred hhhc
Confidence 4433
No 279
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=3.7e-30 Score=286.79 Aligned_cols=213 Identities=27% Similarity=0.433 Sum_probs=182.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|...+.||+|+||.||++.+..++..+|+|.+.+...........+.+|+.+++.++|||++++++++..++..|+|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 48899999999999999999999999999999876544444556678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+. |+|.+++... ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------- 176 (317)
T cd06635 106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------- 176 (317)
T ss_pred CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-------
Confidence 995 5777776543 2458999999999999999999999999999999999999999999999999874321
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
......|++.|+|||++. ...++.++|+|||||++|+|++|++||.+......
T Consensus 177 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 232 (317)
T cd06635 177 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 232 (317)
T ss_pred ------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 112346889999999984 45678899999999999999999999988877777
Q ss_pred HHHHHcCCC
Q 002342 907 FANILHKDL 915 (934)
Q Consensus 907 ~~~i~~~~~ 915 (934)
+..+..+..
T Consensus 233 ~~~~~~~~~ 241 (317)
T cd06635 233 LYHIAQNES 241 (317)
T ss_pred HHHHHhccC
Confidence 777766543
No 280
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=5.2e-30 Score=274.89 Aligned_cols=209 Identities=24% Similarity=0.390 Sum_probs=176.0
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||.|+||.||++.. .++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 468899999987542 2333456888999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|.+++.... ..+++..+..++.|++.+|.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999986543 458899999999999999999999999999999999999999999999999984321100
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
........+++.|+|||++.+..++.++|+||||+++|++++ |..||.+.........+..+
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 001112234678999999998889999999999999999998 99999998888877777654
No 281
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=3.2e-30 Score=283.38 Aligned_cols=205 Identities=28% Similarity=0.400 Sum_probs=171.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+++.||+|+||.||++.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875422 22233567899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+ +++|.+++.... ..++...++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 156 (291)
T cd07870 82 FEYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP--- 156 (291)
T ss_pred Eecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC---
Confidence 9999 577777765443 34788899999999999999999999999999999999999999999999998542110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........+++.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 157 ------------------------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred ------------------------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 0111233578999999998764 578899999999999999999999986554
No 282
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=2.3e-30 Score=281.09 Aligned_cols=215 Identities=30% Similarity=0.480 Sum_probs=180.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~---- 742 (934)
.++|++.+.||.|++|.||+|.+..+++.|++|++.... .....+.+|+.+++.+ +||||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 368999999999999999999999999999999987542 2345688999999999 7999999999997544
Q ss_pred --eEEEEEEccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 743 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
.+|+||||+++++|.+++.... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999886532 456899999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHh
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~ellt 893 (934)
...... ........|++.|+|||++.. ..++.++|||||||+||+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 542110 011223468999999999854 346778999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcC
Q 002342 894 GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|++||........+..+..+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~ 233 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRN 233 (275)
T ss_pred CCCCccccchHHHHHHhhcc
Confidence 99999877766666666554
No 283
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=3.8e-30 Score=281.42 Aligned_cols=213 Identities=23% Similarity=0.412 Sum_probs=179.7
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|++|.||++.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876432 2233456789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|++ ++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 996 58888876542 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 154 -----------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred -----------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 0111233578899999998664 5688999999999999999999999988887776
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..+.+
T Consensus 211 ~~~~~ 215 (284)
T cd07836 211 LKIFR 215 (284)
T ss_pred HHHHH
Confidence 66543
No 284
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.4e-30 Score=280.35 Aligned_cols=209 Identities=23% Similarity=0.402 Sum_probs=177.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc---ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~---~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+|+..+.||+|+||.||++.+..+++.||+|.+...... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 488889999999999999999999999999998753221 12345778899999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~~ 825 (934)
||||+++++|.+++... +.+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999998764 4589999999999999999999999999999999999998776 59999999985542110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.....
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 213 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH 213 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 000112345689999999999988899999999999999999999999975443
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=1.2e-30 Score=287.35 Aligned_cols=208 Identities=26% Similarity=0.454 Sum_probs=179.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+.+.||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999889999999998643 223346678899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~--- 168 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 168 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc---
Confidence 9999999999998653 4889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........|++.|+|||.+.+..++.++|+|||||++|++++|++||...+....+
T Consensus 169 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 169 ------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred ------------------------ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence 01112346889999999999888999999999999999999999999877665444
Q ss_pred H
Q 002342 908 A 908 (934)
Q Consensus 908 ~ 908 (934)
.
T Consensus 225 ~ 225 (293)
T cd06647 225 Y 225 (293)
T ss_pred e
Confidence 3
No 286
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=2.2e-30 Score=283.51 Aligned_cols=213 Identities=26% Similarity=0.424 Sum_probs=179.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++++.||.|++|.||++.+..+++.||||.+..... .......+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875432 22233567889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+ .++|..++.......+++..+..++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~----- 153 (284)
T cd07860 80 FL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP----- 153 (284)
T ss_pred cc-ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC-----
Confidence 99 468988887655566999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
........+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||.+.+....+.
T Consensus 154 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 154 ----------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred ----------------------ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 01112335788999999987654 5789999999999999999999999887766555
Q ss_pred HHH
Q 002342 909 NIL 911 (934)
Q Consensus 909 ~i~ 911 (934)
++.
T Consensus 212 ~~~ 214 (284)
T cd07860 212 RIF 214 (284)
T ss_pred HHH
Confidence 443
No 287
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=3.9e-30 Score=282.09 Aligned_cols=212 Identities=27% Similarity=0.485 Sum_probs=182.8
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|...+.||.|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++...++.|+++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 456667999999999999999999999999987642 23344567899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+.+++|.+++.. ..++...+..++.|++.||+|||++||+||||+|+||+++.++.++|+|||.+......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+....+..
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0111234689999999999988899999999999999999999999998887777777
Q ss_pred HHcCC
Q 002342 910 ILHKD 914 (934)
Q Consensus 910 i~~~~ 914 (934)
+..+.
T Consensus 227 ~~~~~ 231 (285)
T cd06648 227 IRDNL 231 (285)
T ss_pred HHhcC
Confidence 76653
No 288
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=4.1e-30 Score=277.69 Aligned_cols=226 Identities=28% Similarity=0.510 Sum_probs=186.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58999999999999999999988999999999876532 24567888999999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~-- 155 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT-- 155 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc--
Confidence 99999999998764 34889999999999999999999999999999999999999999999999998654321110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCC-HHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 905 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~s~~~DiwSlG~iL~elltG~~Pf~~~~-~~~ 905 (934)
.........+++.|+|||++.+.. ++.++||||||+++|++++|..||.... ...
T Consensus 156 ---------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 156 ---------------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ---------------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 000012346889999999998766 7889999999999999999999997653 333
Q ss_pred HHHHHHcC-CCCCCCCC
Q 002342 906 TFANILHK-DLKFPSST 921 (934)
Q Consensus 906 ~~~~i~~~-~~~~p~~~ 921 (934)
....+..+ ...+|...
T Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (264)
T cd06626 215 IMFHVGAGHKPPIPDSL 231 (264)
T ss_pred HHHHHhcCCCCCCCccc
Confidence 33333332 23455443
No 289
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1e-30 Score=308.48 Aligned_cols=205 Identities=25% Similarity=0.339 Sum_probs=161.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCC-eEEEEE--------------EeecccccChHHHHHHHHHHHHHHhCCCCCcc
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vAlK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv 732 (934)
.++|++++.||+|+||+||++..+... ...+.| .+.+...........+.+|+.+|+.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 578999999999999999998764432 222222 11111112233455678999999999999999
Q ss_pred ceeEEEEeCCeEEEEEEccCCCCchhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002342 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (934)
Q Consensus 733 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~ 809 (934)
++++++...+..|+||+++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 677877765321 122446678889999999999999999999999999999999999
Q ss_pred EEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 810 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
+||+|||++....... .......+||+.|+|||++.+..++.++|||||||+||
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999986532110 01123457999999999999999999999999999999
Q ss_pred HHHhCCCCCC
Q 002342 890 EMLYGYTPFR 899 (934)
Q Consensus 890 elltG~~Pf~ 899 (934)
+|++|..|+.
T Consensus 360 ell~~~~~p~ 369 (501)
T PHA03210 360 DMLSHDFCPI 369 (501)
T ss_pred HHHHCCCCCc
Confidence 9999875443
No 290
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.7e-30 Score=281.11 Aligned_cols=213 Identities=28% Similarity=0.487 Sum_probs=182.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++...+..|++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 46899999999999999999999999999999987653 2345567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+.+++|.+++.... ..+++..+..++.|++.+|+|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999987643 568999999999999999999999 99999999999999999999999999988432100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----C
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 902 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~-----~ 902 (934)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156889999999999999999999999999999999999999754 3
Q ss_pred HHHHHHHHHcC
Q 002342 903 RQKTFANILHK 913 (934)
Q Consensus 903 ~~~~~~~i~~~ 913 (934)
..+.++.+..+
T Consensus 209 ~~~~~~~~~~~ 219 (265)
T cd06605 209 IFELLQYIVNE 219 (265)
T ss_pred HHHHHHHHhcC
Confidence 34455555443
No 291
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=3.5e-30 Score=279.80 Aligned_cols=218 Identities=24% Similarity=0.343 Sum_probs=181.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..++|.+.+.||.|+||.||++.+... ...+|+|.+.... .....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 346799999999999999999987544 4579999886532 24455678899999999999999999998876 55
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+++++|.+++.... ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
.. ........+++.|+|||.+....++.++|+||||+++|+|++ |..||.+.+
T Consensus 160 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ES--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred cc--------------------------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 001112235678999999988889999999999999999986 999999988
Q ss_pred HHHHHHHHHcCC
Q 002342 903 RQKTFANILHKD 914 (934)
Q Consensus 903 ~~~~~~~i~~~~ 914 (934)
..+....+..+.
T Consensus 214 ~~~~~~~~~~~~ 225 (270)
T cd05056 214 NNDVIGRIENGE 225 (270)
T ss_pred HHHHHHHHHcCC
Confidence 888877776654
No 292
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=4.1e-30 Score=279.44 Aligned_cols=215 Identities=27% Similarity=0.432 Sum_probs=179.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-------ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------NRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-------~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
+|.+.+.||.|+||.||++.+..+++.+|+|.+...... .....+.+..|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 588899999999999999999989999999988642111 1123456788999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..++||||+++++|.+++... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999998765 458999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... .........|+..|+|||++.... ++.++|+||||+++|+|++|..||..
T Consensus 160 ~~~-------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIY-------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred ccc-------------------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 100 001123456899999999997754 78899999999999999999999986
Q ss_pred CCHHHHHHHHH
Q 002342 901 KTRQKTFANIL 911 (934)
Q Consensus 901 ~~~~~~~~~i~ 911 (934)
......+..+.
T Consensus 215 ~~~~~~~~~~~ 225 (272)
T cd06629 215 EEAIAAMFKLG 225 (272)
T ss_pred cchHHHHHHhh
Confidence 66655554443
No 293
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=2.3e-30 Score=288.06 Aligned_cols=198 Identities=28% Similarity=0.445 Sum_probs=160.2
Q ss_pred cccccCCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE--eCCeEEEEEEc
Q 002342 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 750 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~~lV~E~ 750 (934)
.+||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+|+.++||||+++++++. .+..+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56899999886532 2235678999999999999999999985 45678999999
Q ss_pred cCCCCchhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecccCc
Q 002342 751 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (934)
Q Consensus 751 ~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl----~~~~~vkl~DFG~a~ 819 (934)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56787776421 12358899999999999999999999999999999999999 456789999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5321100 01112345789999999999774 5788999999999999999999999
Q ss_pred CCCC
Q 002342 899 RGKT 902 (934)
Q Consensus 899 ~~~~ 902 (934)
.+..
T Consensus 217 ~~~~ 220 (317)
T cd07867 217 HCRQ 220 (317)
T ss_pred cccc
Confidence 7543
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=3.2e-30 Score=283.70 Aligned_cols=214 Identities=22% Similarity=0.350 Sum_probs=180.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~~ 745 (934)
.++|++.+.||.|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++.++||||+++++++... +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46899999999999999999999999999999998754322 23334567899999999999999999999877 8999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 58988886643 359999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......+++.|+|||.+.+.. ++.++|+||||+++|+|++|.+||.+.+..
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112335788999999997654 588999999999999999999999988887
Q ss_pred HHHHHHH
Q 002342 905 KTFANIL 911 (934)
Q Consensus 905 ~~~~~i~ 911 (934)
..+.++.
T Consensus 214 ~~~~~~~ 220 (293)
T cd07843 214 DQLNKIF 220 (293)
T ss_pred HHHHHHH
Confidence 7776654
No 295
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=4.2e-30 Score=284.47 Aligned_cols=218 Identities=22% Similarity=0.335 Sum_probs=178.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+..++|++.+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999987775 57888876532 233344678899999999999999999998754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..++++||+++|+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 5679999999999999987643 35899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEK-------------------------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCccc-------------------------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 21100 001122346778999999999999999999999999999997 9999988
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
....+....+..
T Consensus 215 ~~~~~~~~~~~~ 226 (303)
T cd05110 215 IPTREIPDLLEK 226 (303)
T ss_pred CCHHHHHHHHHC
Confidence 776665554443
No 296
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=4.1e-30 Score=285.03 Aligned_cols=211 Identities=28% Similarity=0.420 Sum_probs=180.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|.+.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56999999999999999999999999999999987544444455567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----- 167 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----- 167 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence 9995 67777765432 3589999999999999999999999999999999999999999999999998843210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.....|++.|+|||++. ...++.++||||||+++|+|++|++||.+.+...
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 168 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred --------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 12346888999999984 3567889999999999999999999999887766
Q ss_pred HHHHHHc
Q 002342 906 TFANILH 912 (934)
Q Consensus 906 ~~~~i~~ 912 (934)
....+..
T Consensus 222 ~~~~~~~ 228 (307)
T cd06607 222 ALYHIAQ 228 (307)
T ss_pred HHHHHhc
Confidence 6555544
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=3.4e-30 Score=282.23 Aligned_cols=214 Identities=29% Similarity=0.445 Sum_probs=181.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+++++.++|+||+++++++...+..|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 379999999999999999999999999999998875422 3334567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++++.|..+.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999876666555443 3489999999999999999999999999999999999999999999999999854321110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......++..|+|||++.+. .++.++|+||||+++|+|++|++||.+.+..+.+
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 112235688999999999888 8889999999999999999999999988776665
Q ss_pred HHHH
Q 002342 908 ANIL 911 (934)
Q Consensus 908 ~~i~ 911 (934)
..+.
T Consensus 212 ~~~~ 215 (288)
T cd07833 212 YLIQ 215 (288)
T ss_pred HHHH
Confidence 5543
No 298
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=6.3e-30 Score=275.89 Aligned_cols=218 Identities=26% Similarity=0.497 Sum_probs=186.8
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLI 747 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~~lV 747 (934)
+|++.+.||.|+||.||++.+..++..||+|.+..... .......+..|+.+++.++||||+++++++.. ....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999999999999999999876433 34455678889999999999999999998753 4578999
Q ss_pred EEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH-----~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998653 2346899999999999999999999 88999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
..... .......|++.|+|||++.+..++.++|+||||+++|+|++|+.||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 32110 011234689999999999998899999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCC
Q 002342 901 KTRQKTFANILHKDL 915 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~ 915 (934)
.+.....+.+..+.+
T Consensus 213 ~~~~~~~~~~~~~~~ 227 (265)
T cd08217 213 RNQLQLASKIKEGKF 227 (265)
T ss_pred cCHHHHHHHHhcCCC
Confidence 887777777777654
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=3.3e-30 Score=280.94 Aligned_cols=209 Identities=28% Similarity=0.506 Sum_probs=178.8
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCccceeEEEEeCCeEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~~~~~~l 746 (934)
.|++.+.||.|+||.||++.+..+++.||+|.+.... .......+.+|+.+++.+. |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5889999999999999999999999999999987542 2334566788999999996 9999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... .+++..+..++.|++.+|.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-- 154 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN-- 154 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC--
Confidence 99999999999998653 5899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
........|++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.....
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 155 -------------------------SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred -------------------------ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 011223468999999999865 456889999999999999999999998877665
Q ss_pred HHHHH
Q 002342 906 TFANI 910 (934)
Q Consensus 906 ~~~~i 910 (934)
....+
T Consensus 210 ~~~~~ 214 (277)
T cd06917 210 AMMLI 214 (277)
T ss_pred hhhcc
Confidence 55443
No 300
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=3.9e-30 Score=276.77 Aligned_cols=218 Identities=26% Similarity=0.470 Sum_probs=186.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58899999999999999999999999999999876432 22344567889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~~~~~ 828 (934)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 99999999999775555689999999999999999999999999999999999999876 46999999885432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+.+..+...
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01122358999999999988889999999999999999999999999888777777
Q ss_pred HHHcCCC
Q 002342 909 NILHKDL 915 (934)
Q Consensus 909 ~i~~~~~ 915 (934)
.+..+.+
T Consensus 213 ~~~~~~~ 219 (257)
T cd08225 213 KICQGYF 219 (257)
T ss_pred HHhcccC
Confidence 7665543
No 301
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=4.3e-30 Score=281.42 Aligned_cols=213 Identities=29% Similarity=0.413 Sum_probs=176.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEE-----eC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~-----~~ 741 (934)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.. .....+.+|+.+++.+ +||||+++++++. .+
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 578999999999999999999999999999999876421 2234577899999999 7999999999873 45
Q ss_pred CeEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
+.+|+||||+++++|.+++... ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA 172 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence 6799999999999999887532 23458999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG 894 (934)
..... ........|++.|+|||++.. ..++.++|||||||++|+|++|
T Consensus 173 ~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g 225 (286)
T cd06638 173 QLTST---------------------------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG 225 (286)
T ss_pred ecccC---------------------------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcC
Confidence 43210 011123468999999999853 4578899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHH
Q 002342 895 YTPFRGKTRQKTFANIL 911 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~ 911 (934)
++||........+..+.
T Consensus 226 ~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 226 DPPLADLHPMRALFKIP 242 (286)
T ss_pred CCCCCCCchhHHHhhcc
Confidence 99998876655554443
No 302
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=4.9e-30 Score=284.66 Aligned_cols=216 Identities=29% Similarity=0.418 Sum_probs=180.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~ 744 (934)
..++|++.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.++++++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46789999999999999999999999999999999875422 122223456799999999999999999998754 568
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYC-EQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecC-CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999999 458888876542 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. .......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999876 4578899999999999999999999999998
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+.+..+.+
T Consensus 215 ~~~~~~~~~ 223 (309)
T cd07845 215 IEQLDLIIQ 223 (309)
T ss_pred HHHHHHHHH
Confidence 888877765
No 303
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=5.9e-30 Score=276.32 Aligned_cols=213 Identities=29% Similarity=0.500 Sum_probs=185.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++.+.||.|++|.||++.+..+++.|++|.+..... ......+.+|+.++..++||||+++++++......++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368999999999999999999999999999999876532 245677889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+++++|.+++... ..+++..+..++.|++.+|.|||+ +|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 999999999999764 459999999999999999999999 999999999999999999999999999985432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---CHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQ 904 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~---~~~ 904 (934)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||... ...
T Consensus 155 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 155 -------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred -------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 1112346889999999999998999999999999999999999999877 445
Q ss_pred HHHHHHHc
Q 002342 905 KTFANILH 912 (934)
Q Consensus 905 ~~~~~i~~ 912 (934)
+..+.+..
T Consensus 210 ~~~~~~~~ 217 (264)
T cd06623 210 ELMQAICD 217 (264)
T ss_pred HHHHHHhc
Confidence 56666654
No 304
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=7.4e-30 Score=274.70 Aligned_cols=215 Identities=22% Similarity=0.376 Sum_probs=181.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
..+|++.+.||.|+||.||++.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 457999999999999999999885 467899998875432 234578899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++.... ..+++..++.++.|++.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987543 358899999999999999999999999999999999999999999999999885421100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~ 906 (934)
........++..|+|||++.+..++.++|+||||+++|+|++ |.+||........
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112235678999999998889999999999999999998 9999998888888
Q ss_pred HHHHHcCC
Q 002342 907 FANILHKD 914 (934)
Q Consensus 907 ~~~i~~~~ 914 (934)
.+.+..+.
T Consensus 211 ~~~~~~~~ 218 (256)
T cd05112 211 VETINAGF 218 (256)
T ss_pred HHHHhCCC
Confidence 88876653
No 305
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=1e-29 Score=282.73 Aligned_cols=212 Identities=28% Similarity=0.427 Sum_probs=180.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|...+.||+|+||.||++.+..++..|++|.+.............+.+|+.+++.++|||++++++++.+....|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37778889999999999999999999999999876544444555678889999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+ .++|.+++... ...+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.+||+|||++....
T Consensus 102 ~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 56787777554 2458999999999999999999999999999999999999999999999999873211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
......|+..|+|||++. ...++.++|+|||||++|+|++|.+||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 45678899999999999999999999988877666
Q ss_pred HHHHHcCC
Q 002342 907 FANILHKD 914 (934)
Q Consensus 907 ~~~i~~~~ 914 (934)
...+....
T Consensus 229 ~~~~~~~~ 236 (313)
T cd06633 229 LYHIAQND 236 (313)
T ss_pred HHHHHhcC
Confidence 66665443
No 306
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=3.7e-30 Score=278.24 Aligned_cols=217 Identities=31% Similarity=0.463 Sum_probs=180.8
Q ss_pred ccccccccCCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 672 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
++.+.||.|.||.||+|... ..+..|+||.+... ........+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 45678999999542 3444578899999999999999999999999988889999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||++|+|.+++.......++......++.||+.||.|||+++++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~-- 157 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS-- 157 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 999999999999988645669999999999999999999999999999999999999999999999999985531100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~ 906 (934)
.........+...|+|||.+....++.++||||||+++|||++ |+.||...+..++
T Consensus 158 -----------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 158 -----------------------KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp -----------------------SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred -----------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0011223356789999999998889999999999999999999 7899999999998
Q ss_pred HHHHHcCCC
Q 002342 907 FANILHKDL 915 (934)
Q Consensus 907 ~~~i~~~~~ 915 (934)
..++.++..
T Consensus 215 ~~~~~~~~~ 223 (259)
T PF07714_consen 215 IEKLKQGQR 223 (259)
T ss_dssp HHHHHTTEE
T ss_pred ccccccccc
Confidence 888865543
No 307
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=8.5e-30 Score=280.82 Aligned_cols=214 Identities=19% Similarity=0.198 Sum_probs=162.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhCCCCCccce
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPAL 734 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hp~Iv~l 734 (934)
+..++|++.+.||+|+||.||+|.+..+ +..+|+|+........... ......+...+..++|++|+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999999877 6778888644221100000 0112233344566789999999
Q ss_pred eEEEEeCC----eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002342 735 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (934)
Q Consensus 735 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~v 810 (934)
++++.... ..+++|+++ ..++.+.+... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98776543 457889988 55676666543 336788899999999999999999999999999999999999999
Q ss_pred EEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHH
Q 002342 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (934)
Q Consensus 811 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~e 890 (934)
+|+|||+|.......... ...........||+.|+|||++.+..++.++|||||||+||+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999996543211100 000112234579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC
Q 002342 891 MLYGYTPFRGKT 902 (934)
Q Consensus 891 lltG~~Pf~~~~ 902 (934)
|++|++||.+..
T Consensus 226 l~~g~~P~~~~~ 237 (294)
T PHA02882 226 WAGIKLPWKGFG 237 (294)
T ss_pred HHhCCCCCCccc
Confidence 999999998763
No 308
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=6.5e-30 Score=274.82 Aligned_cols=217 Identities=25% Similarity=0.380 Sum_probs=185.1
Q ss_pred cccccccccCCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
+++.+.||.|+||.||++.+...+ ..+|+|.+.... .......+..|+.+++.++|+||+++++++...+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 467789999999999999998766 899999986542 22255678899999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
+|||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999765433389999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~ 905 (934)
.......+++.|+|||.+.+..++.++|+||||+++|+|++ |.+||...+...
T Consensus 159 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 --------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred --------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00001226789999999988889999999999999999998 899999988888
Q ss_pred HHHHHHcCCC
Q 002342 906 TFANILHKDL 915 (934)
Q Consensus 906 ~~~~i~~~~~ 915 (934)
.++.+..+..
T Consensus 213 ~~~~~~~~~~ 222 (258)
T smart00219 213 VLEYLKKGYR 222 (258)
T ss_pred HHHHHhcCCC
Confidence 8888877654
No 309
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=6.9e-30 Score=279.00 Aligned_cols=221 Identities=20% Similarity=0.239 Sum_probs=183.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEec----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 740 (934)
+..++|++.+.||+|+||.||++.+.. ++..+++|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999876 3578999987643 244556778899999999999999999998765
Q ss_pred CCeEEEEEEccCCCCchhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEe
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~D 814 (934)
....+++++|+++++|.+++..... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5778999999999999999865422 4589999999999999999999999999999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt- 893 (934)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998643211100 00112245778999999999889999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcC
Q 002342 894 GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|++||...+..+....+..+
T Consensus 216 g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred CCCCcCcCCHHHHHHHHHcC
Confidence 99999988877777666554
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=7.2e-30 Score=280.97 Aligned_cols=215 Identities=21% Similarity=0.370 Sum_probs=177.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCe----
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH---- 743 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~---- 743 (934)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46999999999999999999999999999999886542 22223456788999999995 6999999999987665
Q ss_pred -EEEEEEccCCCCchhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccC
Q 002342 744 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 818 (934)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a 818 (934)
.|+||||+.+ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999964 8888876432 245899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
...... ........+++.|+|||++.+ ..++.++|+||||+++|+|++|.+|
T Consensus 159 ~~~~~~---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIP---------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCC---------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 543210 011122357889999999865 4578899999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002342 898 FRGKTRQKTFANILH 912 (934)
Q Consensus 898 f~~~~~~~~~~~i~~ 912 (934)
|.+.+....+..+..
T Consensus 212 ~~~~~~~~~~~~~~~ 226 (295)
T cd07837 212 FPGDSELQQLLHIFK 226 (295)
T ss_pred CCCCCHHHHHHHHHH
Confidence 999888776665543
No 311
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=5.9e-30 Score=280.11 Aligned_cols=203 Identities=26% Similarity=0.369 Sum_probs=167.8
Q ss_pred CCc-ccccccccCCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--C
Q 002342 669 QHF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (934)
Q Consensus 669 ~~y-~i~~~LG~G~~g~Vy~a~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~ 741 (934)
++| ++++.||.|+||+||++.. ..++..||+|.+.... .......+.+|+.+|+.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 9999999999999988753 3567899999987542 22344667889999999999999999998765 3
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|++|||+++++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 4689999999999999998653 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
..... .........++..|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus 158 ~~~~~------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 158 PEGHE------------------------YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred CCcch------------------------hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 21100 00011122456779999999988899999999999999999999999864
No 312
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=3.9e-30 Score=281.18 Aligned_cols=213 Identities=28% Similarity=0.441 Sum_probs=171.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCccceeEEEEeCCeEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
++|++.+.||+|+||.||++.+..+|+.||+|.+.+... .. ....+..|+.+ ++.++||||+++++++..++.+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-SQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-cH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876432 12 22345556665 6677999999999999999999999
Q ss_pred EEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||+ .++|.+++... ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999 57887776542 234699999999999999999999998 9999999999999999999999999998542110
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC----CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122458889999999865 4567899999999999999999999975
Q ss_pred C-CHHHHHHHHHc
Q 002342 901 K-TRQKTFANILH 912 (934)
Q Consensus 901 ~-~~~~~~~~i~~ 912 (934)
. ...+.+..+..
T Consensus 210 ~~~~~~~~~~~~~ 222 (283)
T cd06617 210 WKTPFQQLKQVVE 222 (283)
T ss_pred cccCHHHHHHHHh
Confidence 3 33344444444
No 313
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=4.9e-30 Score=285.09 Aligned_cols=209 Identities=27% Similarity=0.428 Sum_probs=173.7
Q ss_pred CcccccccccCCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~~ 745 (934)
+|.+.+.||+|+||.||++.+.. +++.||+|.+.............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999988 8999999999874323334456678899999999999999999999988 8899
Q ss_pred EEEEccCCCCchhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec----CCcEEEEecccC
Q 002342 746 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 818 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~----~~~vkl~DFG~a 818 (934)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5777766432 1236899999999999999999999999999999999999999 899999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
........ ........++++.|+|||++.+. .++.++|+|||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLK------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCcc------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 65321110 01122345689999999998764 578899999999999999999999
Q ss_pred CCCCCH
Q 002342 898 FRGKTR 903 (934)
Q Consensus 898 f~~~~~ 903 (934)
|.+...
T Consensus 216 ~~~~~~ 221 (316)
T cd07842 216 FKGREA 221 (316)
T ss_pred CcCCcc
Confidence 987554
No 314
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=273.75 Aligned_cols=223 Identities=25% Similarity=0.378 Sum_probs=182.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
+..++.+-+..||.|+||+|++..++.+|+..|||.+..... .....++..|.+. ++.-+.||||++|+..-.++..
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 445566777889999999999999999999999999986543 3344566667665 5556899999999999999999
Q ss_pred EEEEEccCCCCchhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 745 CLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
||.||+| ..||..+.+. .....+++..+-.|..-.+.||.||-.. .||||||||+|||++..|.|||||||+|..
T Consensus 139 WiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999999 7777655432 2234599999999999999999999976 899999999999999999999999999954
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc--CCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
+..+ -..+...|...|||||.+. +.+|+.+||+||||++|||+.||..||
T Consensus 218 Lv~S----------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPy 269 (361)
T KOG1006|consen 218 LVDS----------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPY 269 (361)
T ss_pred HHHH----------------------------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCc
Confidence 3211 1223447999999999994 456899999999999999999999999
Q ss_pred CCCC-HHHHHHHHHcCCCCCCC
Q 002342 899 RGKT-RQKTFANILHKDLKFPS 919 (934)
Q Consensus 899 ~~~~-~~~~~~~i~~~~~~~p~ 919 (934)
.+-+ ..+++.++..|++++-.
T Consensus 270 r~w~svfeql~~Vv~gdpp~l~ 291 (361)
T KOG1006|consen 270 RKWDSVFEQLCQVVIGDPPILL 291 (361)
T ss_pred chHHHHHHHHHHHHcCCCCeec
Confidence 9854 46888899999876544
No 315
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=1.1e-29 Score=277.06 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=182.7
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
-|++++.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 4888999999999999999998899999999876432 23345678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|..++.. ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----- 154 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT----- 154 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc-----
Confidence 9999999998864 34899999999999999999999999999999999999999999999999988543110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........|+..|+|||.+.+..++.++|+|||||++|+|++|.+||...+.......
T Consensus 155 ----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 155 ----------------------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred ----------------------hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 0011234688899999999988889999999999999999999999988777766666
Q ss_pred HHcC
Q 002342 910 ILHK 913 (934)
Q Consensus 910 i~~~ 913 (934)
+..+
T Consensus 213 ~~~~ 216 (277)
T cd06641 213 IPKN 216 (277)
T ss_pred HhcC
Confidence 6544
No 316
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=7.3e-31 Score=310.20 Aligned_cols=237 Identities=27% Similarity=0.413 Sum_probs=185.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------ 740 (934)
...+|+.+..||+||||.||+|+++-+|+.||||.+.... .......+.+|+..|.+|+|||||++|..+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3568999999999999999999999999999999987643 56667788999999999999999998764300
Q ss_pred --------------------------------------------------------------------------------
Q 002342 741 -------------------------------------------------------------------------------- 740 (934)
Q Consensus 741 -------------------------------------------------------------------------------- 740 (934)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002342 741 -------------------------K--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 787 (934)
Q Consensus 741 -------------------------~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yL 787 (934)
+ ..+||-||||+...|.+++..+... -.....+.+++||++||.|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHH
Confidence 0 1278999999999999988775321 15788999999999999999
Q ss_pred HHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccch
Q 002342 788 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAP 867 (934)
Q Consensus 788 H~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aP 867 (934)
|++|||||||||.||+++.++.|||+|||+|+......... .............+....++.+||..|+||
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~---------d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESI---------DQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhH---------hhccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999999999996521100000 000000011111223355678999999999
Q ss_pred hhhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCC
Q 002342 868 EIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKTFANILHKDLKFP 918 (934)
Q Consensus 868 E~l~~~---~~s~~~DiwSlG~iL~elltG~~Pf~~~~-~~~~~~~i~~~~~~~p 918 (934)
|++.+. +|+.++|+||||++||||+ .||.... ...++..+.++.+++|
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~ 836 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEP 836 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCC
Confidence 999765 4999999999999999999 4687543 4577888888888887
No 317
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=1e-29 Score=278.34 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=169.6
Q ss_pred cCCcccccccccCCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~ 741 (934)
..+|++++.||+|+||.||++.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35899999999999999999974 457889999998653 34455678899999999999999999998753 4
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|+||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999987542 34899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
...... ........++..|+|||++.+..++.++|+|||||++|+|++|..|+..
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 213 (284)
T cd05081 159 PQDKEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213 (284)
T ss_pred cCCCcc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence 211100 0001112345569999999998999999999999999999998877643
No 318
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=2.1e-31 Score=273.16 Aligned_cols=208 Identities=29% Similarity=0.466 Sum_probs=175.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-CC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~ 742 (934)
...|++.+.||+|.||.||+|..+.++ +.||||.++-... .........+|+.+++.++||||+.|..+|-. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 568999999999999999999665543 3789998875422 22334567899999999999999999999876 88
Q ss_pred eEEEEEEccCCCCchhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEEec
Q 002342 743 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 815 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~----~~vkl~DF 815 (934)
.++|++||. .-+|+..++.. ..+.++...++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 66898888643 23579999999999999999999999999999999999999988 89999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG 894 (934)
|+++.+... ..+.......+-|.+|.|||.+.|. .|+.++|+|+.||++.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999775421 2334455667889999999999885 678899999999999999999
Q ss_pred CCCCCCC
Q 002342 895 YTPFRGK 901 (934)
Q Consensus 895 ~~Pf~~~ 901 (934)
+|.|.+.
T Consensus 237 ~PlF~g~ 243 (438)
T KOG0666|consen 237 EPLFKGR 243 (438)
T ss_pred Cccccch
Confidence 9999874
No 319
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.6e-29 Score=270.82 Aligned_cols=215 Identities=47% Similarity=0.868 Sum_probs=189.7
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||.|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++++..+...|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999876655555677889999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 836 (934)
.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999765 358999999999999999999999999999999999999999999999999985432110
Q ss_pred ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Q 002342 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (934)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (934)
.......|+..|+|||.+.+...+.++|+||||+++|+|++|..||........++.+....+.
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1223456889999999999888899999999999999999999999988888888888887777
Q ss_pred CCCC
Q 002342 917 FPSS 920 (934)
Q Consensus 917 ~p~~ 920 (934)
+|..
T Consensus 212 ~~~~ 215 (250)
T cd05123 212 FPEF 215 (250)
T ss_pred CCCC
Confidence 6665
No 320
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=3.8e-30 Score=279.11 Aligned_cols=212 Identities=23% Similarity=0.321 Sum_probs=176.0
Q ss_pred cccccCCcEEEEEEEEecCC------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~------~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.||.|+||.||++.+.... ..+|+|.+.+.. .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986544 789999886542 2234567888999999999999999999999999999999
Q ss_pred EccCCCCchhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----cEEEEecccC
Q 002342 749 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 818 (934)
Q Consensus 749 E~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-----~vkl~DFG~a 818 (934)
||+++++|.+++... ....+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999998653 223478899999999999999999999999999999999999877 8999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
....... .........++..|+|||++.+..++.++|||||||++|+|++ |+.|
T Consensus 159 ~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSD-------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ccccccc-------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 5432110 0011122346788999999999999999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcC
Q 002342 898 FRGKTRQKTFANILHK 913 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~ 913 (934)
|...+..+....+..+
T Consensus 214 ~~~~~~~~~~~~~~~~ 229 (269)
T cd05044 214 YPALNNQEVLQHVTAG 229 (269)
T ss_pred CcccCHHHHHHHHhcC
Confidence 9988888877777654
No 321
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=1.3e-29 Score=278.64 Aligned_cols=215 Identities=30% Similarity=0.416 Sum_probs=179.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~----- 741 (934)
.++|.+.+.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.+ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 478999999999999999999999999999999986531 2234567899999998 899999999998753
Q ss_pred CeEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
+..|+||||+++++|.+++... ....+++..++.++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 4689999999999999987632 23468999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-----CCCchhHHHHHHHHHHHHHhC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~s~~~DiwSlG~iL~elltG 894 (934)
...... .......|+..|+|||++... .++.++|+|||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432100 011234688999999998653 357899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcC
Q 002342 895 YTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~ 913 (934)
++||........+..+..+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~ 248 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRN 248 (291)
T ss_pred CCCCCCCcHHHHHHHHhcC
Confidence 9999988776666666544
No 322
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=1e-29 Score=272.84 Aligned_cols=210 Identities=26% Similarity=0.374 Sum_probs=176.6
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+.||.|+||.||++.+.. ++.||+|.+..... ......+.+|++++++++||||+++++++......|+||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999998875432 235567889999999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchh
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 834 (934)
+|.+++.... ..++...+..++.+++.+|.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-------- 148 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-------- 148 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc--------
Confidence 9999986543 3588999999999999999999999999999999999999999999999999854211000
Q ss_pred hhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
........++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.........+..+
T Consensus 149 -----------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~ 211 (251)
T cd05041 149 -----------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211 (251)
T ss_pred -----------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence 000012234667999999998899999999999999999998 99999888877777666553
No 323
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.2e-29 Score=278.73 Aligned_cols=222 Identities=43% Similarity=0.755 Sum_probs=180.2
Q ss_pred CcccccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
.|++.+.||.|+||.||+|.+. .+|..||+|++.+.... .......+.+|+.+++.+ +|+||+.++++|..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999985 47899999998754322 223345678899999999 699999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999998764 34899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0112245689999999999753 46778999999999999999999997432
Q ss_pred ----HHHHHHHHHcCCCCCCC
Q 002342 903 ----RQKTFANILHKDLKFPS 919 (934)
Q Consensus 903 ----~~~~~~~i~~~~~~~p~ 919 (934)
...+.+.+......+|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYPQ 233 (290)
T ss_pred ccccHHHHHHHhhccCCCCCc
Confidence 34445555555444443
No 324
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=6.8e-30 Score=279.87 Aligned_cols=204 Identities=24% Similarity=0.365 Sum_probs=170.7
Q ss_pred CCcccccccccCCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--C
Q 002342 669 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~ 742 (934)
..|++++.||+|+||.||++.. ..++..||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4689999999999999999985 4578899999986532 344456788999999999999999999998764 6
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..++||||++|++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999986543 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.... .........|+..|+|||++.+..++.++|||||||++|+|+++..|+.
T Consensus 161 ~~~~------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~ 213 (284)
T cd05079 161 TDKE------------------------YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES 213 (284)
T ss_pred cCcc------------------------ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence 1100 0011123457788999999998889999999999999999999877653
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=9.3e-30 Score=278.98 Aligned_cols=214 Identities=28% Similarity=0.460 Sum_probs=185.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++.+.||.|++|.||++.+..++..|++|++..... ....+.+|+.+++.++|+||+++++++...+..|++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999875422 456788899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~--- 169 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE--- 169 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc---
Confidence 99999999999998753 36999999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.....
T Consensus 170 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 170 ------------------------KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred ------------------------hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 00112345788999999999888999999999999999999999999988777666
Q ss_pred HHHHcC
Q 002342 908 ANILHK 913 (934)
Q Consensus 908 ~~i~~~ 913 (934)
..+..+
T Consensus 226 ~~~~~~ 231 (286)
T cd06614 226 FLITTK 231 (286)
T ss_pred HHHHhc
Confidence 666543
No 326
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=6.1e-30 Score=277.89 Aligned_cols=195 Identities=31% Similarity=0.506 Sum_probs=165.6
Q ss_pred CCccccccc--ccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 669 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 669 ~~y~i~~~L--G~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
+.|.+.+.+ |.|+||.||++.++.++..+|+|.+.+..... .|+.+...+ +||||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 467777776 99999999999999999999999987542111 123333323 7999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~ 824 (934)
+||||+++++|.+++.... .+++..+..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 9999999999999997653 699999999999999999999999999999999999999988 999999998854321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.....|++.|+|||++.+..++.++|+||||+++|+|++|..||......
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 11235889999999999999999999999999999999999999865443
No 327
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=9.7e-30 Score=278.20 Aligned_cols=213 Identities=24% Similarity=0.416 Sum_probs=179.6
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|++.+.||.|++|.||++.+..+|..||+|.+..... .......+.+|+.+++.++|||++++++++.+.+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 7888999999999999999999999999999875422 222335677899999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+ +++|.+++.......+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 9 578999987765446999999999999999999999999999999999999999999999999998543210
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
........+++.|+|||++.+. .++.++|+||||+++|+|++|++||.+.+....+..
T Consensus 153 ---------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 153 ---------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ---------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0011223568899999988764 568899999999999999999999998877666555
Q ss_pred HHc
Q 002342 910 ILH 912 (934)
Q Consensus 910 i~~ 912 (934)
+.+
T Consensus 212 ~~~ 214 (283)
T cd07835 212 IFR 214 (283)
T ss_pred HHH
Confidence 543
No 328
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=1.5e-29 Score=274.69 Aligned_cols=210 Identities=21% Similarity=0.308 Sum_probs=168.4
Q ss_pred cccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
+.||+|+||.||++... .++..+|+|.+.... .......+.+|+.+++.++||||+++++++......|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999864 355789999876542 22334567889999999999999999999999999999999999
Q ss_pred CCCchhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 753 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 753 ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
+++|.+++.... ...++...+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~---- 154 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED---- 154 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc----
Confidence 999999986532 2246677888899999999999999999999999999999999999999999984321100
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-------CCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-------~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.........|++.|+|||++.+. .++.++|+||||+++|+|++ |..||...
T Consensus 155 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 155 ---------------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ---------------------eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 00112234678899999998643 35779999999999999996 99999887
Q ss_pred CHHHHHHHHH
Q 002342 902 TRQKTFANIL 911 (934)
Q Consensus 902 ~~~~~~~~i~ 911 (934)
...+......
T Consensus 214 ~~~~~~~~~~ 223 (269)
T cd05087 214 SDEQVLTYTV 223 (269)
T ss_pred ChHHHHHHHh
Confidence 7766554433
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=7.8e-30 Score=286.63 Aligned_cols=213 Identities=25% Similarity=0.424 Sum_probs=175.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 742 (934)
.++|++.+.||+|+||.||++.+..+++.||+|.+... ........+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999999999999999998642 2233456677899999999999999999887643 3
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|+||||+ +++|..++.. +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 589999999 5688877754 349999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.... ........+|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0011123578999999998755 56888999999999999999999999887
Q ss_pred CHHHHHHHH
Q 002342 902 TRQKTFANI 910 (934)
Q Consensus 902 ~~~~~~~~i 910 (934)
+....+..+
T Consensus 214 ~~~~~~~~~ 222 (336)
T cd07849 214 DYLHQLNLI 222 (336)
T ss_pred CHHHHHHHH
Confidence 665544433
No 330
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=3e-30 Score=278.51 Aligned_cols=209 Identities=20% Similarity=0.312 Sum_probs=169.0
Q ss_pred cccccCCcEEEEEEEEecCCe-------EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~-------~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+.||.|+||.||++.+...+. .+|+|.+... .....+.+.+|+.+++.++||||+++++++..+...++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999866543 3888877543 234456778899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--------EEEEecccCc
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 819 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~--------vkl~DFG~a~ 819 (934)
|||+.+++|..++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997653 35899999999999999999999999999999999999987765 6899999874
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhC-CCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG-YTP 897 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG-~~P 897 (934)
... ......+++.|+|||++.+. .++.++|+|||||++|+|++| .+|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 11234688899999999864 578899999999999999998 577
Q ss_pred CCCCCHHHHHHHHHcCCCCCCC
Q 002342 898 FRGKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~p~ 919 (934)
|...+...... +......+|.
T Consensus 206 ~~~~~~~~~~~-~~~~~~~~~~ 226 (258)
T cd05078 206 LSALDSQKKLQ-FYEDRHQLPA 226 (258)
T ss_pred hhhccHHHHHH-HHHccccCCC
Confidence 76665554433 3344445554
No 331
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.3e-29 Score=280.66 Aligned_cols=219 Identities=24% Similarity=0.325 Sum_probs=177.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 5689999999999999999999999999999998865322 122233456799999999999999999988654
Q ss_pred --CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
...|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3469999999 568888876542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
........ .........+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54221100 00111234678999999998765 4688999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002342 899 RGKTRQKTFANILH 912 (934)
Q Consensus 899 ~~~~~~~~~~~i~~ 912 (934)
.+.+.......+..
T Consensus 225 ~~~~~~~~~~~~~~ 238 (310)
T cd07865 225 QGNTEQHQLTLISQ 238 (310)
T ss_pred CCCCHHHHHHHHHH
Confidence 98877665554443
No 332
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.6e-29 Score=284.93 Aligned_cols=211 Identities=29% Similarity=0.466 Sum_probs=179.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
.++|++++.||.|+||.||++.+..++..||+|.+.+.. ........+.+|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 578999999999999999999999999999999986532 23334456788999999999999999999987543
Q ss_pred -eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899888764 34899999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. ......+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123357889999999976 4578899999999999999999999998
Q ss_pred CCHHHHHHHHHcC
Q 002342 901 KTRQKTFANILHK 913 (934)
Q Consensus 901 ~~~~~~~~~i~~~ 913 (934)
.+....+..+...
T Consensus 219 ~~~~~~~~~~~~~ 231 (343)
T cd07880 219 HDHLDQLMEIMKV 231 (343)
T ss_pred CCHHHHHHHHHHh
Confidence 8877776666553
No 333
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=1.1e-29 Score=275.50 Aligned_cols=219 Identities=26% Similarity=0.399 Sum_probs=183.8
Q ss_pred CcccccccccCCcEEEEEEEEec-CCeEEEEEEeecccc-------cChHHHHHHHHHHHHHHh-CCCCCccceeEEEEe
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vAlK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~ 740 (934)
+|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+.+|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48999999999999999999987 688999998864321 123345567788888875 799999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
.++.|++|||+++++|.+++.. .....+++..++.++.|++.+|.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988753 223459999999999999999999996 6899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+...... .......|++.|+|||++.+..++.++|+||||+++|+|++|++|
T Consensus 161 ~~~~~~~----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPE----------------------------SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeecccc----------------------------cccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 8542210 012244689999999999998899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCC
Q 002342 898 FRGKTRQKTFANILHKDLK 916 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~ 916 (934)
|...........+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred ccccCHHHHHHHHhhccCC
Confidence 9988887777777765543
No 334
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.1e-29 Score=275.11 Aligned_cols=213 Identities=30% Similarity=0.493 Sum_probs=179.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCeEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 746 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~~l 746 (934)
++|...+.||.|++|.||++.+..+++.||+|.+.... .......+.+|+++++.++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46889999999999999999999999999999987542 23455678899999999999999999999865 347899
Q ss_pred EEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 747 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||+++++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999888653 22355899999999999999999999999999999999999999999999999998432110
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~--- 901 (934)
......++..|+|||.+.+..++.++|+|||||++|+|++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011345788999999999999999999999999999999999999865
Q ss_pred --CHHHHHHHHHc
Q 002342 902 --TRQKTFANILH 912 (934)
Q Consensus 902 --~~~~~~~~i~~ 912 (934)
...+....+..
T Consensus 210 ~~~~~~~~~~~~~ 222 (287)
T cd06621 210 PLGPIELLSYIVN 222 (287)
T ss_pred CCChHHHHHHHhc
Confidence 23444444444
No 335
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.9e-29 Score=282.49 Aligned_cols=223 Identities=21% Similarity=0.294 Sum_probs=178.4
Q ss_pred cccccC--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 675 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 675 ~~LG~G--~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
..||.| +||+||++.+..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875432 23445778899999999999999999999999999999999999
Q ss_pred CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
+++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999987654456999999999999999999999999999999999999999999999999865322110000
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i 910 (934)
... .........++..|||||++.+. .++.++|||||||++|+|++|++||.+......+..+
T Consensus 158 -----------~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 -----------AKV----VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred -----------ccc----cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 000 00001122356779999999764 4678999999999999999999999988777666666
Q ss_pred HcCCCCCC
Q 002342 911 LHKDLKFP 918 (934)
Q Consensus 911 ~~~~~~~p 918 (934)
+.+....|
T Consensus 223 ~~~~~~~~ 230 (328)
T cd08226 223 LKGPPYSP 230 (328)
T ss_pred hcCCCCCC
Confidence 65544333
No 336
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2e-29 Score=284.37 Aligned_cols=210 Identities=29% Similarity=0.459 Sum_probs=177.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++.+.||+|+||.||++.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4789999999999999999999999999999999875422 223345677899999999999999999988643
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...|++++++ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 3578899988 8899888754 24899999999999999999999999999999999999999999999999998432
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123467889999999876 5678899999999999999999999998
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+....+..+..
T Consensus 221 ~~~~~~~~~~~~ 232 (345)
T cd07877 221 TDHIDQLKLILR 232 (345)
T ss_pred CCHHHHHHHHHH
Confidence 877766666544
No 337
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.4e-29 Score=281.11 Aligned_cols=214 Identities=27% Similarity=0.419 Sum_probs=180.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|...+.||.|+||.||++++..++..+|+|.+.............+.+|+.+++.++|+|++++++++...+..|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45889999999999999999999999999999987543334445567788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+. ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------ 166 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 166 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec------
Confidence 9995 6787776543 2458999999999999999999999999999999999999999999999999884321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......|++.|+|||.+. ...++.++|||||||++|+|++|..||.......
T Consensus 167 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 167 -------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred -------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 112346889999999985 3457889999999999999999999998876666
Q ss_pred HHHHHHcCCC
Q 002342 906 TFANILHKDL 915 (934)
Q Consensus 906 ~~~~i~~~~~ 915 (934)
....+..+..
T Consensus 222 ~~~~~~~~~~ 231 (308)
T cd06634 222 ALYHIAQNES 231 (308)
T ss_pred HHHHHhhcCC
Confidence 6555555443
No 338
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-30 Score=284.13 Aligned_cols=226 Identities=23% Similarity=0.366 Sum_probs=193.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.....++.+.||.|.||.||++..... .--||||..+.++ +.+..+.|.+|.-+|++++||||++|++++.. .
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 334456678899999999999988433 3469999988754 45567889999999999999999999999976 5
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|||||+++-|.|..+++.+. ..++......++.||+.||.|||+.++|||||...|||+.+..-|||+|||+++.+.
T Consensus 464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 6899999999999999998774 459999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
+... ...+...-...|||||.+.-..++.++|||-||+++||++. |.-||.|-
T Consensus 543 d~~y--------------------------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv 596 (974)
T KOG4257|consen 543 DDAY--------------------------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV 596 (974)
T ss_pred ccch--------------------------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc
Confidence 4332 22223334678999999999999999999999999999995 99999999
Q ss_pred CHHHHHHHHHcCC-CCCCCCCC
Q 002342 902 TRQKTFANILHKD-LKFPSSTP 922 (934)
Q Consensus 902 ~~~~~~~~i~~~~-~~~p~~~~ 922 (934)
.+.+++-.|.+|. ++.|...|
T Consensus 597 kNsDVI~~iEnGeRlP~P~nCP 618 (974)
T KOG4257|consen 597 KNSDVIGHIENGERLPCPPNCP 618 (974)
T ss_pred cccceEEEecCCCCCCCCCCCC
Confidence 9999999998887 47776653
No 339
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=2.9e-29 Score=269.31 Aligned_cols=218 Identities=32% Similarity=0.565 Sum_probs=189.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|.+.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+++++.++|||++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999998999999999876432 33555678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 750 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|+++++|.+++.... ...++...+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~--- 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST--- 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccC---
Confidence 999999999987643 356999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+..++.
T Consensus 157 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 157 ------------------------VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred ------------------------cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 01123346899999999999988999999999999999999999999988888888
Q ss_pred HHHHcCCC
Q 002342 908 ANILHKDL 915 (934)
Q Consensus 908 ~~i~~~~~ 915 (934)
..+..+.+
T Consensus 213 ~~~~~~~~ 220 (258)
T cd08215 213 LKILKGQY 220 (258)
T ss_pred HHHhcCCC
Confidence 87776543
No 340
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=4.6e-29 Score=269.53 Aligned_cols=214 Identities=20% Similarity=0.285 Sum_probs=172.7
Q ss_pred cccccCCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE-eCCeEEEEEEc
Q 002342 675 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 750 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lV~E~ 750 (934)
+.||+|+||.||++.+.. .+..+|+|.+... ........+.+|+.+++.++||||+++++++. .++..+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998754 3467999987532 23445667888999999999999999999765 45678999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+.+++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~---- 153 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY---- 153 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc----
Confidence 99999999987543 3467778888999999999999999999999999999999999999999999854321100
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~ 909 (934)
..........+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....
T Consensus 154 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 154 -------------------YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred -------------------eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 00011123346778999999998899999999999999999998 6788888887777777
Q ss_pred HHcCC
Q 002342 910 ILHKD 914 (934)
Q Consensus 910 i~~~~ 914 (934)
+..+.
T Consensus 215 ~~~~~ 219 (262)
T cd05058 215 LLQGR 219 (262)
T ss_pred HhcCC
Confidence 76654
No 341
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=7.6e-30 Score=286.45 Aligned_cols=216 Identities=26% Similarity=0.431 Sum_probs=179.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----CCeE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~~~~ 744 (934)
++|++.+.||.|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+|+.++||||++++++|.. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 68999999999999999999999999999999987542 223345667789999999999999999998863 4578
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 57899888654 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0111224478999999999866 4578899999999999999999999998776
Q ss_pred HHHHHHHH
Q 002342 904 QKTFANIL 911 (934)
Q Consensus 904 ~~~~~~i~ 911 (934)
...+..+.
T Consensus 218 ~~~~~~~~ 225 (334)
T cd07855 218 VHQLKLIL 225 (334)
T ss_pred HHHHHHHH
Confidence 65555443
No 342
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=1.4e-29 Score=274.18 Aligned_cols=198 Identities=21% Similarity=0.315 Sum_probs=163.2
Q ss_pred cccccCCcEEEEEEEEec------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 675 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~------------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
+.||.|+||.||++.... ....+++|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2335888887643 2344557788999999999999999999999989
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-------EEEEec
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 815 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~-------vkl~DF 815 (934)
..++||||+++++|..++..+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999988876543 45899999999999999999999999999999999999987664 899999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-CCCCCchhHHHHHHHHHHHHH-h
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 893 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~~DiwSlG~iL~ell-t 893 (934)
|++.... ......|++.|+|||++. +..++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVL-------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCcccc-------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 9884321 011235788999999986 467888999999999999998 5
Q ss_pred CCCCCCCCCHHHHH
Q 002342 894 GYTPFRGKTRQKTF 907 (934)
Q Consensus 894 G~~Pf~~~~~~~~~ 907 (934)
|..||......+..
T Consensus 206 ~~~p~~~~~~~~~~ 219 (262)
T cd05077 206 GEIPLKDKTLAEKE 219 (262)
T ss_pred CCCCCCCcchhHHH
Confidence 99999876655443
No 343
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=9.4e-31 Score=287.31 Aligned_cols=202 Identities=32% Similarity=0.522 Sum_probs=177.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhCC---CCCccceeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLD---HPFVPALYASFQ 739 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~-----~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~ 739 (934)
..+|..++.||.|+||+|++|.++.+...|+||.+.|..... ..++-.+-.|+.||..|+ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457999999999999999999999999999999998754322 222334557999999997 999999999999
Q ss_pred eCCeEEEEEEcc-CCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 740 TKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 740 ~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+++++||+||.. +|.+|++++..++ .+++.+++.|++|++.|+++||+.||||||||-+||.++.+|-+||+|||.|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 999999999986 5779999998764 4999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~P 897 (934)
... .++....++||..|.|||++.|.+| ...-|||+||++||.+++..-|
T Consensus 718 a~~-----------------------------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 718 AYT-----------------------------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred hhh-----------------------------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence 542 2334467899999999999999877 5578999999999999999999
Q ss_pred CCC
Q 002342 898 FRG 900 (934)
Q Consensus 898 f~~ 900 (934)
|..
T Consensus 769 yyn 771 (772)
T KOG1152|consen 769 YYN 771 (772)
T ss_pred CcC
Confidence 963
No 344
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=9.2e-30 Score=279.23 Aligned_cols=204 Identities=26% Similarity=0.395 Sum_probs=170.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 746 (934)
.++|+..+.||+|+||.||++.+..+++.||+|.+.+... ......+.+|+.++.++. ||||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 4578889999999999999999999999999999875432 244567788999999995 9999999999999999999
Q ss_pred EEEccCCCCchhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 747 ITDYCPGGELFLLL---DRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 747 V~E~~~ggsL~~~l---~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
+|||+ +++|.++. .......+++..+..++.|++.||+|||+. ||+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99999 45655443 222335699999999999999999999985 99999999999999999999999999985321
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC---CCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.. .......|++.|+|||++.+. .++.++|||||||++|+|++|++||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 10 011233588999999999776 68889999999999999999999997
Q ss_pred CCC
Q 002342 900 GKT 902 (934)
Q Consensus 900 ~~~ 902 (934)
...
T Consensus 212 ~~~ 214 (288)
T cd06616 212 KWN 214 (288)
T ss_pred hcc
Confidence 654
No 345
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=2.7e-29 Score=269.83 Aligned_cols=216 Identities=30% Similarity=0.493 Sum_probs=187.3
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||.|+||.||++.+..++..||+|.+.+.... ......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 588999999999999999999999999999998765432 3445677789999999999999999999999999999999
Q ss_pred ccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 750 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 750 ~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|+++++|..++... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999988652 2245899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999999999999999999999999999999999998888777
Q ss_pred HHHHcCCC
Q 002342 908 ANILHKDL 915 (934)
Q Consensus 908 ~~i~~~~~ 915 (934)
..+..+.+
T Consensus 211 ~~~~~~~~ 218 (256)
T cd08530 211 YKVQRGKY 218 (256)
T ss_pred HHHhcCCC
Confidence 77766554
No 346
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=2.8e-29 Score=274.10 Aligned_cols=208 Identities=25% Similarity=0.425 Sum_probs=172.8
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeC--CeEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--THVCLI 747 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~--~~~~lV 747 (934)
|++++.||+|+||.||++.+..+++.||+|.+++... .... .....|+.++..+. ||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876422 2222 23457888888885 99999999999987 899999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+. ++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+||+++. +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--- 152 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--- 152 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC---
Confidence 99995 68888876543 45899999999999999999999999999999999999999 99999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......+++.|+|||++.. ..++.++|+|||||++|+|++|.+||.+.+..+.
T Consensus 153 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 153 -------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred -------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 01122457889999998754 5568899999999999999999999998887766
Q ss_pred HHHHH
Q 002342 907 FANIL 911 (934)
Q Consensus 907 ~~~i~ 911 (934)
+..+.
T Consensus 208 ~~~~~ 212 (282)
T cd07831 208 IAKIH 212 (282)
T ss_pred HHHHH
Confidence 65554
No 347
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-30 Score=287.41 Aligned_cols=227 Identities=22% Similarity=0.316 Sum_probs=192.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+...+.+.||+|.||.|+.+.++..+ ..||||++...... .....|.+|+.+|.+|+|||+++||++.-+ ...
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 456778899999999999999996532 37999999876432 267889999999999999999999999887 678
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
.||||+++.|+|.+.|.+.....|....+..|+.||+.||.||.++++|||||...|||+-....|||+|||+.+.++..
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 89999999999999998866677999999999999999999999999999999999999998899999999999765432
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
... + .......-...|+|||.+....++.++|||+|||+||||++ |..||.|...
T Consensus 266 ed~-------------------Y-----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g 321 (1039)
T KOG0199|consen 266 EDM-------------------Y-----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG 321 (1039)
T ss_pred Ccc-------------------e-----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH
Confidence 211 1 11111234568999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHcCC-CCCCCCC
Q 002342 904 QKTFANILHKD-LKFPSST 921 (934)
Q Consensus 904 ~~~~~~i~~~~-~~~p~~~ 921 (934)
.+++++|..|. +.-|..+
T Consensus 322 ~qIL~~iD~~erLpRPk~c 340 (1039)
T KOG0199|consen 322 IQILKNIDAGERLPRPKYC 340 (1039)
T ss_pred HHHHHhccccccCCCCCCC
Confidence 99999998654 3555543
No 348
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=2.7e-29 Score=276.58 Aligned_cols=209 Identities=29% Similarity=0.482 Sum_probs=178.8
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|.....||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++|+||+++++++...++.|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44457899999999999999999999999987532 233456688899999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+++++|.+++.. ..+++..++.++.|++.+|+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~------ 169 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 169 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc------
Confidence 999999998754 24899999999999999999999999999999999999999999999999987432110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i 910 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|.+||.+......+..+
T Consensus 170 ---------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~ 228 (292)
T cd06657 170 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228 (292)
T ss_pred ---------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 01122346889999999998888899999999999999999999999988777666655
Q ss_pred Hc
Q 002342 911 LH 912 (934)
Q Consensus 911 ~~ 912 (934)
..
T Consensus 229 ~~ 230 (292)
T cd06657 229 RD 230 (292)
T ss_pred Hh
Confidence 43
No 349
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=3.6e-29 Score=272.03 Aligned_cols=218 Identities=24% Similarity=0.345 Sum_probs=177.9
Q ss_pred cccccccccCCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 671 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
|++.+.||+|+||.||+|.+.. ++..+|||++.... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 6788999999999999998653 57899999987643 23445667889999999999999999999886432
Q ss_pred -eEEEEEEccCCCCchhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 743 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
..+++++|+.+++|..++... ....++...+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999998876432 122478999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~ 896 (934)
+....... .........+++.|++||.+....++.++|||||||++|+|++ |++
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGD-------------------------YYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCc-------------------------ceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 85432110 0011123346678999999999889999999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHcCC
Q 002342 897 PFRGKTRQKTFANILHKD 914 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~ 914 (934)
||.+.+..+.+..+..+.
T Consensus 215 p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05074 215 PYAGVENSEIYNYLIKGN 232 (273)
T ss_pred CCCCCCHHHHHHHHHcCC
Confidence 999888888777776543
No 350
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=295.44 Aligned_cols=234 Identities=24% Similarity=0.357 Sum_probs=199.3
Q ss_pred hcccccccccCCcccccccccCCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcccee
Q 002342 659 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 735 (934)
Q Consensus 659 ~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~ 735 (934)
+.....+++....+|.++||.|.||.|++++.+..++ .||||.++... .......|+.|..||-+++||||++|.
T Consensus 619 vreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLE 696 (996)
T KOG0196|consen 619 VREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLE 696 (996)
T ss_pred HHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEE
Confidence 3344556777888999999999999999999987764 79999998653 445567899999999999999999999
Q ss_pred EEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 736 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
++......++||+|||++|+|..+|+.+.+ .|+..++..+++-|+.||+||-++|.|||||...|||++.+-.+|+.||
T Consensus 697 GVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 697 GVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred EEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccc
Confidence 999999999999999999999999988754 4999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH-hC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 894 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell-tG 894 (934)
|+++...+++.... .+..-.=...|.|||++...+++.++||||+|++|||.+ +|
T Consensus 776 GLSRvledd~~~~y------------------------tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyG 831 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAY------------------------TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 831 (996)
T ss_pred cceeecccCCCccc------------------------cccCCccceeecChhHhhhcccCchhhccccceEEEEecccC
Confidence 99987654432110 000011146899999999999999999999999999988 59
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002342 895 YTPFRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
..||+..+++++++.|.+| +.+|..
T Consensus 832 ERPYWdmSNQdVIkaIe~g-yRLPpP 856 (996)
T KOG0196|consen 832 ERPYWDMSNQDVIKAIEQG-YRLPPP 856 (996)
T ss_pred CCcccccchHHHHHHHHhc-cCCCCC
Confidence 9999999999999999764 445543
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=4.1e-29 Score=273.42 Aligned_cols=212 Identities=24% Similarity=0.434 Sum_probs=178.9
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCccceeEEEEeCCe----
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 743 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~~~~~---- 743 (934)
|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.+ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7889999999999999999988899999999975432 222334566788777666 69999999999988776
Q ss_pred -EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 744 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+++|||+. ++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589888876544469999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.. .......++..|+|||++.+..++.++|+|||||++|+|++|.+||.+.+
T Consensus 159 ~~----------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FE----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CC----------------------------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 11 01112357889999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHc
Q 002342 903 RQKTFANILH 912 (934)
Q Consensus 903 ~~~~~~~i~~ 912 (934)
..+.+.++..
T Consensus 211 ~~~~~~~~~~ 220 (287)
T cd07838 211 EADQLDKIFD 220 (287)
T ss_pred hHHHHHHHHH
Confidence 8888777754
No 352
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=1.9e-29 Score=283.57 Aligned_cols=211 Identities=28% Similarity=0.459 Sum_probs=176.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----Ce
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 743 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~~ 743 (934)
.+|.+.+.||.|+||.||++.+..++..||||.+.+.. ........+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 57999999999999999999999999999999987542 2333445677899999999999999999988643 35
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+ +++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 89999999 57898888654 4599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.. .......|+..|+|||.+.. ..++.++|+|||||++|+|++|++||.+.+
T Consensus 161 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 213 (337)
T cd07858 161 KG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD 213 (337)
T ss_pred Cc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 11123467889999999865 468889999999999999999999998877
Q ss_pred HHHHHHHH
Q 002342 903 RQKTFANI 910 (934)
Q Consensus 903 ~~~~~~~i 910 (934)
....+..+
T Consensus 214 ~~~~~~~~ 221 (337)
T cd07858 214 YVHQLKLI 221 (337)
T ss_pred hHHHHHHH
Confidence 65555444
No 353
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=3.4e-29 Score=273.89 Aligned_cols=213 Identities=26% Similarity=0.432 Sum_probs=180.3
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeEEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 748 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~~lV~ 748 (934)
|++.+.||.|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.++|||++++++++... +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 788999999999999999999999999999998653 2333445678899999999999999999999987 8999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++ ++|..++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9995 58888886542 4699999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......++..|+|||.+.+ ..++.++||||||+++|+|++|++||.+.+....+
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356789999998765 45788999999999999999999999998887777
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..+..
T Consensus 212 ~~~~~ 216 (287)
T cd07840 212 EKIFE 216 (287)
T ss_pred HHHHH
Confidence 76654
No 354
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=4.4e-29 Score=272.22 Aligned_cols=207 Identities=19% Similarity=0.293 Sum_probs=165.5
Q ss_pred ccccCCcEEEEEEEEecC------------------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 002342 676 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~------------------------~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I 731 (934)
.||+|+||.||++....+ ...+|+|.+... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 699999999999875321 235889987643 23344567889999999999999
Q ss_pred cceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---
Q 002342 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 808 (934)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~--- 808 (934)
+++++++......|+||||+++++|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888653 34589999999999999999999999999999999999997644
Q ss_pred ----cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHH
Q 002342 809 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 883 (934)
Q Consensus 809 ----~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwS 883 (934)
.+|++|||++..... .....+++.|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 489999998743210 012247788999999865 56789999999
Q ss_pred HHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 884 LGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 884 lG~iL~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
|||++|+|+ +|++||.+....+... +......+|
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~ 241 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEKER-FYEKKHRLP 241 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHHHH-HHHhccCCC
Confidence 999999995 7999998876655433 333333444
No 355
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=6.6e-29 Score=269.72 Aligned_cols=212 Identities=17% Similarity=0.313 Sum_probs=169.3
Q ss_pred cccccCCcEEEEEEEEecC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 675 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~--~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3689999999999976433 3456677765432 23345678899999999999999999999999999999999999
Q ss_pred CCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 753 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 753 ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+++|.+++.... ...++...++.++.||+.||.|||++|++||||||+|||++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~----- 153 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED----- 153 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch-----
Confidence 999999987542 2346777888999999999999999999999999999999999999999999874321100
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
........+|++.|+|||++.. ..++.++|||||||++|+|++ |.+||...+
T Consensus 154 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 154 --------------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred --------------------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0011224568899999999853 245678999999999999996 688998888
Q ss_pred HHHHHHHHHcC
Q 002342 903 RQKTFANILHK 913 (934)
Q Consensus 903 ~~~~~~~i~~~ 913 (934)
..+.+..+..+
T Consensus 214 ~~~~~~~~~~~ 224 (268)
T cd05086 214 DREVLNHVIKD 224 (268)
T ss_pred HHHHHHHHHhh
Confidence 87777776544
No 356
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=290.50 Aligned_cols=221 Identities=31% Similarity=0.460 Sum_probs=189.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
..+.|++...+|.|+|+.|-.+.+..+++.+++|++.+.. ....+|+.++... +||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4789999999999999999999999999999999998651 2344577666655 7999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ecCCcEEEEecccCcccCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl-~~~~~vkl~DFG~a~~~~~~ 824 (934)
+|||++.|+.|.+.+...+. +. ..+..|+.+|+.|+.|||.+|+|||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999999888876532 44 7777899999999999999999999999999999 58899999999998654211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
..+.|-|..|.|||++....|+.++||||||++||+|++|+.||......
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 22346788999999999999999999999999999999999999987666
Q ss_pred -HHHHHHHcCCCCCCCCCCCCcccCCCC
Q 002342 905 -KTFANILHKDLKFPSSTPSSCKAANVP 931 (934)
Q Consensus 905 -~~~~~i~~~~~~~p~~~~~s~~~k~l~ 931 (934)
+++.+|..+.+. ..+|..||||.
T Consensus 520 ~ei~~~i~~~~~s----~~vS~~AKdLl 543 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS----ECVSDEAKDLL 543 (612)
T ss_pred HHHHHhhcCCccc----cccCHHHHHHH
Confidence 778888777666 45788888873
No 357
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=5.5e-29 Score=270.06 Aligned_cols=203 Identities=27% Similarity=0.391 Sum_probs=170.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.+.....||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++|+||+++++++..++..++||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3444456799999999999999999999999988654 3345567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l--~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~~~ 825 (934)
||+++++|.+++.... ..+ ++..+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~- 162 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI- 162 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC-
Confidence 9999999999987542 234 88889999999999999999999999999999999976 679999999988542110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
........|++.|+|||++.+.. ++.++|+||||+++|+|++|.+||....
T Consensus 163 --------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~ 215 (268)
T cd06624 163 --------------------------NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELG 215 (268)
T ss_pred --------------------------CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcccc
Confidence 00112235889999999986643 7789999999999999999999997643
No 358
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=7.2e-29 Score=265.00 Aligned_cols=210 Identities=32% Similarity=0.537 Sum_probs=182.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|.+.+.||.|++|.||++.+..+++.+++|.+..... .....+.+|+.+++.++||||+++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 48889999999999999999998999999999876432 355678899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.... ..+++..+..++.|++.+|.|||.+|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987653 469999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02345688999999999988889999999999999999999999988765555444
Q ss_pred HH
Q 002342 910 IL 911 (934)
Q Consensus 910 i~ 911 (934)
+.
T Consensus 209 ~~ 210 (253)
T cd05122 209 IA 210 (253)
T ss_pred HH
Confidence 43
No 359
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=3.6e-29 Score=277.28 Aligned_cols=226 Identities=27% Similarity=0.385 Sum_probs=180.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++.+.||.|+||.||++.+..+++.||+|.+....... .......+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999987543222 1223567899999999999999999987543
Q ss_pred --CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
..+|+||||+ +++|...+... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 3579999999 45677766543 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
........... + ............|++.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPKG----------G------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCccccc----------C------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 54321110000 0 00011122345789999999998654 5788999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002342 899 RGKTRQKTFANILH 912 (934)
Q Consensus 899 ~~~~~~~~~~~i~~ 912 (934)
.+.+....+..+..
T Consensus 228 ~~~~~~~~~~~~~~ 241 (311)
T cd07866 228 QGKSDIDQLHLIFK 241 (311)
T ss_pred CCCCHHHHHHHHHH
Confidence 99888877776654
No 360
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=1.2e-28 Score=264.36 Aligned_cols=213 Identities=27% Similarity=0.460 Sum_probs=185.0
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
+|++.+.||+|++|.||++.+..+++.|++|.+.+... .......+.+|+++++.++|||++++++++.+....+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58899999999999999999999999999999987533 23456788999999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++... ..+++..+..++.|++.+|.|||++||+||||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 153 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS---- 153 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc----
Confidence 99999999998765 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...........
T Consensus 154 -----------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 154 -----------------------KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred -----------------------ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 012234688899999999888888999999999999999999999988776666655
Q ss_pred HHc
Q 002342 910 ILH 912 (934)
Q Consensus 910 i~~ 912 (934)
+..
T Consensus 211 ~~~ 213 (254)
T cd06627 211 IVQ 213 (254)
T ss_pred Hhc
Confidence 543
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=5e-29 Score=279.08 Aligned_cols=205 Identities=28% Similarity=0.471 Sum_probs=174.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-CCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~l 746 (934)
.++|++++.||.|+||.||++.+..+++.||+|.+.+.. ........+..|+.+++.++||||++++++|.. ....|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 578999999999999999999999999999999886542 223344667789999999999999999999875 567899
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
+|||+ +++|..++.. ..++...+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 99999 7789888754 3488899999999999999999999999999999999999999999999998843210
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+++.|+|||++.+ ..++.++|+|||||++|+|++|++||.+.....
T Consensus 161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 161 ---------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ---------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 1123467889999999866 568899999999999999999999998877644
Q ss_pred HH
Q 002342 906 TF 907 (934)
Q Consensus 906 ~~ 907 (934)
.+
T Consensus 214 ~~ 215 (328)
T cd07856 214 QF 215 (328)
T ss_pred HH
Confidence 43
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=6.8e-29 Score=278.49 Aligned_cols=216 Identities=25% Similarity=0.404 Sum_probs=175.8
Q ss_pred CcccccccccCCcEEEEEEEEecC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe----CC
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 742 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~--~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~----~~ 742 (934)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8999999986432 2233445677899999999 59999999987542 25
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 678999999 57899888654 459999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.... ..........||+.|+|||++.+ ..++.++|+|||||++|+|++|++||.+.
T Consensus 157 ~~~~-----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPG-----------------------ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred cccc-----------------------cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 1100 00111234578999999998866 46889999999999999999999999987
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+....+..++.
T Consensus 214 ~~~~~~~~~~~ 224 (332)
T cd07857 214 DYVDQLNQILQ 224 (332)
T ss_pred CHHHHHHHHHH
Confidence 76666655543
No 363
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=7.8e-29 Score=265.91 Aligned_cols=214 Identities=29% Similarity=0.434 Sum_probs=183.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--CeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 747 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~~~~lV 747 (934)
+|++.+.||+|++|.||++.+..+++.+++|++..... .......+.+|+.++++++||||+++++.+... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 48889999999999999999998999999999876432 245567888999999999999999999999988 899999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++.... .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999987653 6999999999999999999999999999999999999999999999999998554321100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~-~~~~ 906 (934)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01234568899999999998889999999999999999999999998766 3334
Q ss_pred HHHHH
Q 002342 907 FANIL 911 (934)
Q Consensus 907 ~~~i~ 911 (934)
...+.
T Consensus 213 ~~~~~ 217 (260)
T cd06606 213 LYKIG 217 (260)
T ss_pred HHhcc
Confidence 44443
No 364
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=4.7e-29 Score=275.45 Aligned_cols=217 Identities=25% Similarity=0.359 Sum_probs=178.3
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC----
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~---- 742 (934)
..++|++.+.||.|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35789999999999999999999999999999999875422 2223346678999999999999999999987654
Q ss_pred ------eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecc
Q 002342 743 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (934)
Q Consensus 743 ------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG 816 (934)
.+|+||||+++ +|..++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 89999999965 777777654 3459999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCC
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~ 895 (934)
++........ .......+++.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9854321110 011123467889999998653 5688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002342 896 TPFRGKTRQKTFANILH 912 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~ 912 (934)
+||...+..+.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 216 PIFQANQELAQLELISR 232 (302)
T ss_pred CCCCCCChHHHHHHHHH
Confidence 99998877766665544
No 365
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=4.2e-29 Score=272.92 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=173.6
Q ss_pred cCCcccccccccCCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~ 741 (934)
...|++.+.||+|+||.||++... .++..||+|.+.+.... .....+.+|+++++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357899999999999999999864 34789999998764321 356678899999999999999999999877 6
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...+++|||+++++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999997653 24999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
...... ........++..|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 211000 00111224566799999999888999999999999999999999998754
No 366
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=4.5e-29 Score=280.55 Aligned_cols=218 Identities=28% Similarity=0.458 Sum_probs=179.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeC--CeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~--~~~ 744 (934)
.++|++.+.||+|+||.||++.+..++..+|+|.+.+.. ........+..|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2333445677899999999 999999999998653 468
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+. ++|..++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 6998888653 5889999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
... ..........|++.|+|||.+.+ ..++.++|+||||+++|+|++|++||.+...
T Consensus 161 ~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EEN----------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred ccc----------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 100 00112234568999999998865 4578899999999999999999999998877
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+.+..+..
T Consensus 219 ~~~~~~~~~ 227 (337)
T cd07852 219 LNQLEKIIE 227 (337)
T ss_pred HHHHHHHHH
Confidence 766665544
No 367
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=6.1e-29 Score=267.75 Aligned_cols=196 Identities=20% Similarity=0.261 Sum_probs=165.2
Q ss_pred cccccCCcEEEEEEEEecCC----------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 675 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~----------~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998776 357888765432 115678889999999999999999999988 778
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-------cEEEEeccc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 817 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-------~vkl~DFG~ 817 (934)
++||||+++++|.+++..... .++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999976532 589999999999999999999999999999999999999887 799999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC--CCCchhHHHHHHHHHHHHHh-C
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 894 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~s~~~DiwSlG~iL~ellt-G 894 (934)
+..... .....++..|+|||++.+. .++.++|+|||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854311 1123567789999999876 78899999999999999998 6
Q ss_pred CCCCCCCCHHHHH
Q 002342 895 YTPFRGKTRQKTF 907 (934)
Q Consensus 895 ~~Pf~~~~~~~~~ 907 (934)
..||...+.....
T Consensus 204 ~~p~~~~~~~~~~ 216 (259)
T cd05037 204 EEPLSTLSSSEKE 216 (259)
T ss_pred CCCcccCCchhHH
Confidence 8899877544433
No 368
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.3e-28 Score=273.77 Aligned_cols=206 Identities=23% Similarity=0.325 Sum_probs=168.9
Q ss_pred CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCchhhh
Q 002342 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (934)
Q Consensus 681 ~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (934)
+++.||.+++..+++.||+|.+.... ........+.+|+.+++.++||||++++++|...+..|++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44566677777799999999997642 24456678999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhcccc
Q 002342 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (934)
Q Consensus 761 ~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (934)
.......+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~------------- 157 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR------------- 157 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc-------------
Confidence 8654556899999999999999999999999999999999999999999999999988543211100
Q ss_pred CCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
............++..|+|||++.+ ..++.++|+|||||++|+|++|+.||........+
T Consensus 158 -------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~ 219 (314)
T cd08216 158 -------QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML 219 (314)
T ss_pred -------ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0001112234567889999999976 35788999999999999999999999876655443
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=7.6e-29 Score=278.42 Aligned_cols=228 Identities=24% Similarity=0.325 Sum_probs=180.2
Q ss_pred CCccc-ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChH-----------HHHHHHHHHHHHHhCCCCCccceeE
Q 002342 669 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 736 (934)
Q Consensus 669 ~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hp~Iv~l~~ 736 (934)
++|.. .+.||.|+||.||++.+..+++.||+|.+......... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56764 57799999999999999999999999998754322100 1124678999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecc
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG 816 (934)
++..++..|+||||+. ++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999995 6899988654 449999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCC
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~ 895 (934)
++.....+....... . .. ............+++.|+|||.+.+. .++.++|+|||||++|+|++|+
T Consensus 165 ~~~~~~~~~~~~~~~-~--------~~----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLS-K--------DE----TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeeccccccccccc-c--------cc----cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 986543211100000 0 00 00001112234578899999999764 4688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002342 896 TPFRGKTRQKTFANILH 912 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~ 912 (934)
+||.+.+..+.+..+..
T Consensus 232 ~p~~~~~~~~~~~~i~~ 248 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFE 248 (335)
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 99999888877766644
No 370
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=9.9e-29 Score=271.15 Aligned_cols=222 Identities=42% Similarity=0.720 Sum_probs=179.4
Q ss_pred CcccccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+|++.+.||.|+||.||++.+. .++..||+|++.+.... .......+.+|+.++..+ +||||+.+++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999864 46789999998754322 223345678899999999 699999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+.+++|.+++... ..+++..++.++.|++.+|.|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998754 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. ........|++.|+|||.+.+.. .+.++|+||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 01122356899999999997765 6789999999999999999999996432
Q ss_pred ----HHHHHHHHHcCCCCCCC
Q 002342 903 ----RQKTFANILHKDLKFPS 919 (934)
Q Consensus 903 ----~~~~~~~i~~~~~~~p~ 919 (934)
..+..+.+.......|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd05583 213 EQNSQSEISRRILKSKPPFPK 233 (288)
T ss_pred ccchHHHHHHHHHccCCCCCc
Confidence 23444455554444443
No 371
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=3.6e-29 Score=280.29 Aligned_cols=216 Identities=25% Similarity=0.408 Sum_probs=184.3
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----eE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-----~~ 744 (934)
+|++.+.||.|++|.||+|.+..++..||+|.+.+.. ........+.+|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999899999999987642 23445567889999999999999999999988765 78
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|++|||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 6898888664 36999999999999999999999999999999999999999999999999998653221
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
... ........+++.|+|||++.+. .++.++|+||||+++|+|++|++||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112334688999999999887 889999999999999999999999999998
Q ss_pred HHHHHHHHcC
Q 002342 904 QKTFANILHK 913 (934)
Q Consensus 904 ~~~~~~i~~~ 913 (934)
.+.+..+...
T Consensus 213 ~~~~~~i~~~ 222 (330)
T cd07834 213 IDQLNLIVEV 222 (330)
T ss_pred HHHHHHHHHh
Confidence 8888777653
No 372
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=290.04 Aligned_cols=214 Identities=30% Similarity=0.467 Sum_probs=188.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEE-----eC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~-----~~ 741 (934)
.+.|++...||.|.+|.||+++.+.+++..|+|++.... ..-+++..|.+||+.+ +|||++.+|++|. .+
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 467999999999999999999999999999999987643 2335678899999887 7999999999996 46
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+.+|||||||.|||..++++.-.+..+.+..+..|++.++.||.+||.+.+||||||=.|||++.++.|||+|||++...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 79999999999999999998766778999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
....+..++++|||.|||||++.. ..|+..+|+||||++-.||.-|.|
T Consensus 174 ---------------------------dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 ---------------------------DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred ---------------------------ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 223456678899999999999954 456779999999999999999999
Q ss_pred CCCCCCHHHHHHHHHc
Q 002342 897 PFRGKTRQKTFANILH 912 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~ 912 (934)
|+.+..+...+-+|-.
T Consensus 227 Pl~DmHPmraLF~IpR 242 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPR 242 (953)
T ss_pred CccCcchhhhhccCCC
Confidence 9998888877655543
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=6.7e-29 Score=279.78 Aligned_cols=209 Identities=29% Similarity=0.474 Sum_probs=174.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|.+.+.||.|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999999999999999999875422 223345678899999999999999999998754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...|+||||+ ..+|..++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 93 QDFYLVMPYM-QTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ceEEEEeccc-ccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 3469999999 457766542 24899999999999999999999999999999999999999999999999998432
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. ......|++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.+
T Consensus 168 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 168 DA------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred CC------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123467889999999876 4678899999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+....+..+..
T Consensus 218 ~~~~~~~~~~~~ 229 (342)
T cd07879 218 KDYLDQLTQILK 229 (342)
T ss_pred CCHHHHHHHHHH
Confidence 887766666554
No 374
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=277.80 Aligned_cols=230 Identities=23% Similarity=0.317 Sum_probs=199.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..|++...+.....+||-|.||.||.+.+++-.-.||||.++.+. -.+++|..|..+|+.+.|||+|+|+++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 456677778888899999999999999999999999999987654 4678899999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|||+|||..|+|.+||.......++--.+.+++.||..||+||..+++|||||...|+|+..+..||++|||+++.|
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999998765566788888899999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..+... ...| ..=.+.|.|||-|.-..++.++|||+|||+|||+.| |..||.|
T Consensus 416 tgDTYT----------AHAG----------------AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 416 TGDTYT----------AHAG----------------AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCCcee----------cccC----------------ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 543221 1111 112567999999998899999999999999999996 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCC
Q 002342 901 KTRQKTFANILHKD-LKFPSST 921 (934)
Q Consensus 901 ~~~~~~~~~i~~~~-~~~p~~~ 921 (934)
-+..++|..+.+|. +.-|..+
T Consensus 470 idlSqVY~LLEkgyRM~~PeGC 491 (1157)
T KOG4278|consen 470 IDLSQVYGLLEKGYRMDGPEGC 491 (1157)
T ss_pred ccHHHHHHHHhccccccCCCCC
Confidence 99999998887754 2444433
No 375
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=8.7e-29 Score=270.25 Aligned_cols=212 Identities=27% Similarity=0.477 Sum_probs=180.5
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|++.+.||.|++|.||++.+..+++.+++|.+..... .......+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999999999999999876432 223456778899999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 95 58888876643 469999999999999999999999999999999999999999999999999985432111
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|++||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223578899999999876 788899999999999999999999998888776666
Q ss_pred HHc
Q 002342 910 ILH 912 (934)
Q Consensus 910 i~~ 912 (934)
+..
T Consensus 211 ~~~ 213 (283)
T cd05118 211 IFR 213 (283)
T ss_pred HHH
Confidence 543
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=5.8e-29 Score=280.36 Aligned_cols=211 Identities=28% Similarity=0.480 Sum_probs=180.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~---- 743 (934)
.++|++.+.||.|++|.||++++..++..||+|.+.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 568999999999999999999999999999999886532 223344567789999999999999999998876554
Q ss_pred --EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
.|+|+||+ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899998865 34999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cc------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 11 0123357889999999865 4678899999999999999999999998
Q ss_pred CCHHHHHHHHHcC
Q 002342 901 KTRQKTFANILHK 913 (934)
Q Consensus 901 ~~~~~~~~~i~~~ 913 (934)
......+..+.+.
T Consensus 219 ~~~~~~~~~i~~~ 231 (343)
T cd07851 219 SDHIDQLKRIMNL 231 (343)
T ss_pred CChHHHHHHHHHh
Confidence 8888777776553
No 377
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=8.8e-29 Score=272.85 Aligned_cols=219 Identities=28% Similarity=0.451 Sum_probs=177.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~ 742 (934)
..+..++|++.+.||.|+||.||++.+..+++.||+|.+.+.. .......+..|+.++..+ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 4456789999999999999999999998889999999987542 223345566677766666 5999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..|++|||+ +++|..++.... ..+++..+..++.|++.||.|||+ .||+||||+|+||+++.++.+||+|||++...
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999999999 557777765532 368999999999999999999997 59999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----CCchhHHHHHHHHHHHHHhCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~~DiwSlG~iL~elltG~~P 897 (934)
... .......+++.|+|||++.+.. ++.++|+||||+++|+|++|+.|
T Consensus 166 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 166 VDS----------------------------KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred cCC----------------------------CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCC
Confidence 110 0011224788999999997654 78899999999999999999999
Q ss_pred CCCCCH-HHHHHHHHcCC
Q 002342 898 FRGKTR-QKTFANILHKD 914 (934)
Q Consensus 898 f~~~~~-~~~~~~i~~~~ 914 (934)
|..... .+.+..+....
T Consensus 218 ~~~~~~~~~~~~~~~~~~ 235 (296)
T cd06618 218 YKNCKTEFEVLTKILQEE 235 (296)
T ss_pred CCcchhHHHHHHHHhcCC
Confidence 976333 45566665544
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=8.7e-29 Score=270.07 Aligned_cols=212 Identities=28% Similarity=0.454 Sum_probs=181.3
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|++.+.||+|++|.||++.+..+++.||+|.+.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 677889999999999999999999999999998653 2333445677899999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 95 68999997653 359999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+..+.+.+
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011233467889999999776 788899999999999999999999999888777666
Q ss_pred HHc
Q 002342 910 ILH 912 (934)
Q Consensus 910 i~~ 912 (934)
+..
T Consensus 211 ~~~ 213 (282)
T cd07829 211 IFQ 213 (282)
T ss_pred HHH
Confidence 643
No 379
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=9.9e-29 Score=278.37 Aligned_cols=214 Identities=25% Similarity=0.400 Sum_probs=175.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
..+|.+.+.||.|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 368999999999999999999999999999999886542 23456678899999999999999999876543
Q ss_pred --------CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEE
Q 002342 742 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 812 (934)
Q Consensus 742 --------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl 812 (934)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 36899999995 688888754 34899999999999999999999999999999999999974 567899
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~el 891 (934)
+|||++........ .........|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 99999854321000 0011122357889999998754 5678899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHc
Q 002342 892 LYGYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~ 912 (934)
++|+.||.+.+....+..++.
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHH
Confidence 999999998887776666654
No 380
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=9.2e-29 Score=270.32 Aligned_cols=211 Identities=29% Similarity=0.462 Sum_probs=178.3
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
|++.+.||.|++|.||++.+..+++.|+||.+.+... . .......+|+..++.++ ||||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 7888999999999999999988999999999875422 1 12223456899999998 9999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+ +++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999887765456899999999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
.......|+..|+|||++.+ ..++.++|+||||+++|+|++|++||.+.+..+.+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01123468889999998854 457889999999999999999999999888777766
Q ss_pred HHHc
Q 002342 909 NILH 912 (934)
Q Consensus 909 ~i~~ 912 (934)
.+..
T Consensus 210 ~~~~ 213 (283)
T cd07830 210 KICS 213 (283)
T ss_pred HHHH
Confidence 6543
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=9.8e-29 Score=266.74 Aligned_cols=217 Identities=29% Similarity=0.474 Sum_probs=180.9
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+|.+.+.||+|+||.||++.+...+..+++|+++..... .......+..|+.+++.++||||+++++++......|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 589999999999999999999888777777776643221 223344567799999999999999999999999999999
Q ss_pred EEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 748 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999988764 22356999999999999999999999999999999999999974 67999999988543211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.....
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 111224468899999999988888999999999999999999999998888777
Q ss_pred HHHHHHcCC
Q 002342 906 TFANILHKD 914 (934)
Q Consensus 906 ~~~~i~~~~ 914 (934)
....+..+.
T Consensus 213 ~~~~~~~~~ 221 (260)
T cd08222 213 VVLRIVEGP 221 (260)
T ss_pred HHHHHHcCC
Confidence 777776654
No 382
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-29 Score=276.63 Aligned_cols=217 Identities=24% Similarity=0.362 Sum_probs=185.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..+...++++||+|.||.|.++.- ..+..||+|.++... +....+.|..|+++|.+|+||||+.|++++..++.+|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 4456788999999999999999987 336899999998754 4555688999999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
++||||++|+|.+++.......+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++-...-
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg- 690 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG- 690 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC-
Confidence 9999999999999998764444455666679999999999999999999999999999999999999999999633210
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY--GYTPFRGKTR 903 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt--G~~Pf~~~~~ 903 (934)
+-.+.....+-.+.|||||.+.-++++.++|+|+||++|||+++ ..-||...+.
T Consensus 691 ------------------------~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 691 ------------------------DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred ------------------------CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 11122334566789999999999999999999999999999885 8899999998
Q ss_pred HHHHHHH
Q 002342 904 QKTFANI 910 (934)
Q Consensus 904 ~~~~~~i 910 (934)
+++....
T Consensus 747 e~vven~ 753 (807)
T KOG1094|consen 747 EQVVENA 753 (807)
T ss_pred HHHHHhh
Confidence 8887655
No 383
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.3e-29 Score=248.18 Aligned_cols=206 Identities=24% Similarity=0.418 Sum_probs=173.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeC--Ce
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--TH 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~--~~ 743 (934)
+.++|++++++|+|.|+.||.+....++..++||++++ ...+.+.+|++||..|. ||||++|+++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 45789999999999999999999999999999999875 35578999999999995 99999999999764 45
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~~ 822 (934)
..|++||+++.+...+.. .++.-.++.++.+++.||.|+|++||+|||+||.|++|+.. .+++|+|+|+|....
T Consensus 110 paLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 689999999988877753 38889999999999999999999999999999999999875 579999999995432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCC-CC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF-RG 900 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf-~~ 900 (934)
+...-+--+.+..|--||.+.. ..|+..-|+|||||+|..|+..+.|| .|
T Consensus 185 ----------------------------p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 ----------------------------PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred ----------------------------CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 2222334456778899999965 45788999999999999999877775 56
Q ss_pred CCHHHHHHHHH
Q 002342 901 KTRQKTFANIL 911 (934)
Q Consensus 901 ~~~~~~~~~i~ 911 (934)
.++.+++-+|.
T Consensus 237 ~dN~DQLVkIa 247 (338)
T KOG0668|consen 237 HDNYDQLVKIA 247 (338)
T ss_pred CCCHHHHHHHH
Confidence 77777665553
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.4e-30 Score=258.26 Aligned_cols=224 Identities=24% Similarity=0.346 Sum_probs=182.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------ 740 (934)
..+.|+.+.+||+|.||.||+|+.+.+++.||+|.+--... ....-....+|++||..|.|+|++.+++++..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 46789999999999999999999999999999985432111 11223446789999999999999999887752
Q ss_pred --CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 741 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 741 --~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
...+|+||.+| .-+|..++... ...|+..+++.++.+++.||.|+|.+.|+|||+||.|+||+.+|.+||+|||++
T Consensus 94 r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 94 RDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 34589999999 66888887654 345999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+.++.+.... ....+..+-|++|.+||.+.+. .|+++.|+|..||++.+|++|.+.
T Consensus 172 r~fs~~~n~~-----------------------kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 172 RAFSTSKNVV-----------------------KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cceecccccC-----------------------CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence 7654321110 0112334679999999999874 678899999999999999999999
Q ss_pred CCCCCHHHHHHHHHc--CCCC
Q 002342 898 FRGKTRQKTFANILH--KDLK 916 (934)
Q Consensus 898 f~~~~~~~~~~~i~~--~~~~ 916 (934)
|.+++.++++..|.. |.+.
T Consensus 229 mqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 229 MQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred ccCChHHHHHHHHHHHhccCC
Confidence 999999999988854 5543
No 385
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-30 Score=259.57 Aligned_cols=212 Identities=28% Similarity=0.427 Sum_probs=179.1
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----eEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HVC 745 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-----~~~ 745 (934)
.+--+.||.|+||.||.+.|..+|+.||+|.+.. .+......+++.+|+++|..++|.|++..+++.+... .+|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4445689999999999999999999999998753 3445566788999999999999999999999887543 357
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
.++|+| ..+|...+-. ...++-+.++-+++||+.||+|||+.||.||||||.|+|++++-.+||||||+++....+.
T Consensus 134 V~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 889999 7788877754 4669999999999999999999999999999999999999999999999999996532111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
....+..+-|-.|.|||.++|. .|+.++||||.||++.||+..+..|...++.
T Consensus 211 --------------------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi 264 (449)
T KOG0664|consen 211 --------------------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI 264 (449)
T ss_pred --------------------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence 1222334678899999999885 6788999999999999999999999999998
Q ss_pred HHHHHHHc
Q 002342 905 KTFANILH 912 (934)
Q Consensus 905 ~~~~~i~~ 912 (934)
+.++.|.+
T Consensus 265 qQL~lItd 272 (449)
T KOG0664|consen 265 EQLQMIID 272 (449)
T ss_pred HHHHHHHH
Confidence 88887754
No 386
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=4e-28 Score=258.71 Aligned_cols=181 Identities=32% Similarity=0.457 Sum_probs=155.8
Q ss_pred CCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCchhh
Q 002342 680 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 759 (934)
Q Consensus 680 G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 759 (934)
|.+|.||+|+++.+++.||+|.+.+.. ...+|...+....||||+++++++...+..|+||||++|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 889999999999999999999987642 233455555666799999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccc
Q 002342 760 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 839 (934)
Q Consensus 760 l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~ 839 (934)
+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||.+.....
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~---------------- 137 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED---------------- 137 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----------------
Confidence 8764 3489999999999999999999999999999999999999999999999998743211
Q ss_pred cCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 840 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||..
T Consensus 138 --------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 138 --------------SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred --------------ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 01123456789999999888889999999999999999999998864
No 387
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=3e-29 Score=272.14 Aligned_cols=221 Identities=27% Similarity=0.386 Sum_probs=188.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCccceeEEEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQ 739 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~Iv~l~~~~~ 739 (934)
+...+|.+....|.|-||+|..|.+...|..||||++..+. ...+.=..|++||+.|+. -|++.|+-.|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 34589999999999999999999999999999999998653 233444679999999953 48999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEeccc
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 817 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~ 817 (934)
..+++|||||.+ ..+|.+++++.+ .-.|....++.|+.|+..||..|-..||+|.||||+|||++.+ ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999999 889999998742 2358889999999999999999999999999999999999875 4689999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
|...+.. .-+...-+..|.|||++.|.+|++..|+||.||+||||.||+..
T Consensus 584 A~~~~en-----------------------------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASEN-----------------------------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ccccccc-----------------------------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 8443211 11223456689999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCC
Q 002342 898 FRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
|+|.++-++++....-.-.||.-
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHH
Confidence 99999999998887766666653
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6e-28 Score=261.45 Aligned_cols=140 Identities=29% Similarity=0.444 Sum_probs=124.8
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-----C---CCccc
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PFVPA 733 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---p~Iv~ 733 (934)
.+..++..+|.+.++||+|-|++||++.|..+.++||+|+.+.. ....+....||++|++++ | .+||+
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~ 146 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ 146 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence 45566778999999999999999999999999999999998752 455667788999999983 3 36999
Q ss_pred eeEEEE----eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEec
Q 002342 734 LYASFQ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 806 (934)
Q Consensus 734 l~~~~~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~ 806 (934)
|++.|. ++.++|||+|++ |.+|..+|.....+.++...++.|++|||.||.|||.+ ||||.||||+|||+..
T Consensus 147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 999997 467999999999 99999999988888899999999999999999999987 9999999999999953
No 389
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=7.6e-28 Score=311.93 Aligned_cols=379 Identities=15% Similarity=0.138 Sum_probs=277.4
Q ss_pred ccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHH
Q 002342 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (934)
Q Consensus 176 ~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~ 255 (934)
...+.++.+++++++|+.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.+|++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34445667889999999999999999999998 788999999999999999999999998888888776666666655
Q ss_pred HHhcC-CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHH
Q 002342 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (934)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~ 334 (934)
.+.++ ..+..+.+..++||+.+|+..+.++++|.+|.+.+++++++|||++|++|++++...
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~----------------- 409 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLM----------------- 409 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHH-----------------
Confidence 55544 346778888999999999999999999999999999999999999999999877311
Q ss_pred hHHHHHHHHHH-ccCCCCcccCCCCCcccccCCCCchhhhcccccCCCC-C-CCCCCCCCC---CCCCcccccccccccc
Q 002342 335 ATSSVTELVQA-MKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKS-E-NVPPPRRNS---YGGGCRTSMQRISEVP 408 (934)
Q Consensus 335 ~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~---~~~~~~~~~~~~~~~~ 408 (934)
+....+.+. -......+.......+|....+.+|+..++..+...- . ..|+. +.. ...... .....-..+
T Consensus 410 --~~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d-~~~~~~~~~~~~-~~~~~~~~e 485 (1092)
T PRK09776 410 --ERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPED-RQRVEKEIRDAL-QGRSPFKLE 485 (1092)
T ss_pred --HHHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhH-HHHHHHHHHHHH-hcCCCeeEE
Confidence 111112222 2223334444556667777777777776553321110 0 11110 000 000000 011222344
Q ss_pred hhcccccccccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHHHHhccccEEE
Q 002342 409 EKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVI 487 (934)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v 487 (934)
.+...++| ..|+........+.++...... ....|||+|++.|+++++. ..++.++++++++|++
T Consensus 486 ~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~i-------------g~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~ 551 (1092)
T PRK09776 486 FRIVVKDG-VRHIRALANRVLNKDGEVERLL-------------GINMDMTEVRQLNEALFQEKERLHITLDSIGEAVVC 551 (1092)
T ss_pred EEEEcCCc-eEEEEEeeEEEECCCCCEEEEE-------------eeeeehhHHHHHHHHHHHHHHHHHHHHhccccEEEE
Confidence 55567888 8888877777666665544332 3368999999999999776 6799999999999999
Q ss_pred EcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCC--CCHHHHHHHHHHHhcCCc--EEEEEEEEecCCcEEEEE
Q 002342 488 TDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNL 563 (934)
Q Consensus 488 ~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~--~~~~~~~~i~~~l~~~~~--~~~e~~~~~kdG~~~wv~ 563 (934)
+|.+|+ |+++|+++++++||+.+|++|+++..+.+.. ........+......... ...+....+++|..+|+.
T Consensus 552 ~D~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 628 (1092)
T PRK09776 552 TDMAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVH 628 (1092)
T ss_pred ECCCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEE
Confidence 999888 9999999999999999999999976655422 222222334444444433 456777889999999999
Q ss_pred EEEEeeecCCCCEEEEEEEEEcCCcccccccc
Q 002342 564 FHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (934)
Q Consensus 564 ~~~~pi~de~G~v~~~vgi~rDITerk~~e~~ 595 (934)
.+..|+++.+|++.+++++++|||++|+.+++
T Consensus 629 ~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~ 660 (1092)
T PRK09776 629 YSITPLSTLDGENIGSVLVIQDVTESRKMLRQ 660 (1092)
T ss_pred EEeeeeecCCCCEEEEEEEEEecchHHHHHHH
Confidence 99999999999999999999999999986543
No 390
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=9.8e-27 Score=244.28 Aligned_cols=216 Identities=37% Similarity=0.602 Sum_probs=184.0
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|.+.+.||.|++|.||++.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67788999999999999999888999999999865322 2567888999999999999999999999998999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 830 (934)
+++++|.+++..... .+++..+..++.+++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 999999999876532 28899999999999999999999999999999999999999999999999986542111
Q ss_pred cchhhhccccCCCCcccccccccccccccCCCCccchhhh-cCCCCCchhHHHHHHHHHHHHHhCCCCCCC--CCHHHHH
Q 002342 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG--KTRQKTF 907 (934)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~s~~~DiwSlG~iL~elltG~~Pf~~--~~~~~~~ 907 (934)
........++..|++||.+ ....++.++|+||||+++++|++|+.||.+ .....+.
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0012234678899999999 667778899999999999999999999987 4444778
Q ss_pred HHHHcCCC
Q 002342 908 ANILHKDL 915 (934)
Q Consensus 908 ~~i~~~~~ 915 (934)
+.|..+..
T Consensus 212 ~~~~~~~~ 219 (225)
T smart00221 212 DVWSFGVP 219 (225)
T ss_pred HHHhcCCc
Confidence 88887764
No 391
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=7.3e-28 Score=249.33 Aligned_cols=210 Identities=25% Similarity=0.453 Sum_probs=182.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
..+|.-++.+|.|.- .|..+.|.-.++.+|+|.+... .......++..+|..++..+.|+||++++.+|.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 457889999999998 8888999899999999987665 33445567788999999999999999999999643
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|+||||| ..+|...+.-. ++-..+..++.|+++|++|||+.||+||||||+||++..+..+||+|||+|..-
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILME----LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 3579999999 88999888742 788999999999999999999999999999999999999999999999999542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. .-..+..+.|..|.|||++.+..|...+||||+||++.||++|+..|.|.
T Consensus 169 ~~----------------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DT----------------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred Cc----------------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 11 11234567899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+..+++-+|.+
T Consensus 221 d~idQ~~ki~~ 231 (369)
T KOG0665|consen 221 DHIDQWNKIIE 231 (369)
T ss_pred hHHHHHHHHHH
Confidence 99988887765
No 392
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=6.7e-27 Score=253.14 Aligned_cols=192 Identities=25% Similarity=0.415 Sum_probs=160.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCccceeEEEEeCC--
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT-- 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~Iv~l~~~~~~~~-- 742 (934)
+....+++..||+|.||.||++.. +++.||||++.. .....+.+|.+|.+. +.|+||++|+++-.-.+
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356778889999999999999998 668999999864 345678888888775 48999999998876544
Q ss_pred --eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEEecCCcEE
Q 002342 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---------giiHrDLKp~NILl~~~~~vk 811 (934)
.++||++|.+.|+|.++|+.+ .+++.....++.-|+.||+|||.. .|+|||||..|||+..|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 789999999999999999874 499999999999999999999963 599999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-C-----chhHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-T-----SAVDWWALG 885 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s-----~~~DiwSlG 885 (934)
|+|||+|..+.+. .+...+..-+||.+|||||+|.+.-. . .+.||||+|
T Consensus 357 IaDFGLAl~~~p~-------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEPG-------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecCC-------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 9999999665311 11122334689999999999977522 1 279999999
Q ss_pred HHHHHHHhC
Q 002342 886 ILLYEMLYG 894 (934)
Q Consensus 886 ~iL~elltG 894 (934)
.+|||+++.
T Consensus 412 LVLWEi~SR 420 (534)
T KOG3653|consen 412 LVLWEIASR 420 (534)
T ss_pred HHHHHHHhh
Confidence 999999974
No 393
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-27 Score=266.63 Aligned_cols=221 Identities=23% Similarity=0.296 Sum_probs=186.8
Q ss_pred CcccccccccCCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
..+..++||+|+||+||++.+.-.|+ +||+|++.... ......++..|+-+|..|+|||+++|++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 45667899999999999999865554 68888877542 3455678999999999999999999999998755 88
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
||++|+++|+|.++++..+ ..+.......|..||++||.|||.+++|||||...|||+..-..+||.|||+++......
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999998764 458889999999999999999999999999999999999999999999999997754322
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~ 904 (934)
.. .......-.+.|||-|.+....|++++|||||||++|||+| |.-||.+....
T Consensus 853 ~e-------------------------y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KE-------------------------YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred cc-------------------------ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 11 11222234678999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHcCCC-CCCC
Q 002342 905 KTFANILHKDL-KFPS 919 (934)
Q Consensus 905 ~~~~~i~~~~~-~~p~ 919 (934)
++-..+..|+- ..|.
T Consensus 908 eI~dlle~geRLsqPp 923 (1177)
T KOG1025|consen 908 EIPDLLEKGERLSQPP 923 (1177)
T ss_pred HhhHHHhccccCCCCC
Confidence 99888877663 4444
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=4.1e-26 Score=264.52 Aligned_cols=240 Identities=17% Similarity=0.167 Sum_probs=168.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe----------------cCCeEEEEEEeecccccChH-----------HHHHHH
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 717 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~----------------~~~~~vAlK~~~~~~~~~~~-----------~~~~~~ 717 (934)
.+..++|.+.++||+|+||.||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 356789999999999999999999752 24567999998643211000 112233
Q ss_pred HHHHHHHhCCCCC-----ccceeEEEEe--------CCeEEEEEEccCCCCchhhhccCCC-------------------
Q 002342 718 AEREILDMLDHPF-----VPALYASFQT--------KTHVCLITDYCPGGELFLLLDRQPT------------------- 765 (934)
Q Consensus 718 ~E~~il~~l~hp~-----Iv~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~~------------------- 765 (934)
.|+.++.++.|.+ ++.++++|.. .+..||||||+.+++|.+++.....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 4666777776554 4677777643 3568999999999999998864211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCC
Q 002342 766 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 842 (934)
Q Consensus 766 ---~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 842 (934)
..++...++.++.|++.+|.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 124567788999999999999999999999999999999999999999999985431100
Q ss_pred CCcccccccccccccccCCCCccchhhhcCCCC----------------------CchhHHHHHHHHHHHHHhCCC-CCC
Q 002342 843 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH----------------------TSAVDWWALGILLYEMLYGYT-PFR 899 (934)
Q Consensus 843 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~----------------------s~~~DiwSlG~iL~elltG~~-Pf~ 899 (934)
........+|+.|+|||.+..... ..+.|+||+||++|+|++|.. ||.
T Consensus 364 ---------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 364 ---------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ---------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 001112245889999999854321 124699999999999999875 775
Q ss_pred CCCH-----------HHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 900 GKTR-----------QKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 900 ~~~~-----------~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
+... ....+.+..+.+.|+.+...+..++||
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dL 476 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDL 476 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHH
Confidence 4221 122233445666777666666666654
No 395
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=1.4e-25 Score=237.78 Aligned_cols=205 Identities=42% Similarity=0.718 Sum_probs=175.2
Q ss_pred CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCchhhh
Q 002342 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (934)
Q Consensus 681 ~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (934)
+||.||++.+..+++.+|+|++........ ...+.+|+.+++.++|+||+++++++......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999998999999999876533221 578889999999999999999999999999999999999888999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhcccc
Q 002342 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (934)
Q Consensus 761 ~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (934)
..... ++...+..++.+++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76433 8999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCC
Q 002342 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKF 917 (934)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~-~~~~~~~~~i~~~~~~~ 917 (934)
......|++.|++||.+.+..++.++|+||||+++|+|++|..||.. ......+..+..+....
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 206 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence 22344688899999999988889999999999999999999999988 55566666665555543
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=4.3e-26 Score=270.93 Aligned_cols=200 Identities=18% Similarity=0.220 Sum_probs=143.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE----
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS---- 737 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~---- 737 (934)
...++|.+.+.||+|+||.||++.+..+ +..||+|.+.... ..+....+ .+....+.++..++..
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 3567999999999999999999999888 8999999876421 11111111 1122222222222211
Q ss_pred --EEeCCeEEEEEEccCCCCchhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002342 738 --FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (934)
Q Consensus 738 --~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~~~~i~~qil~aL~yLH~~giiHrDL 797 (934)
...+...+|||||+.+++|.+++...... ......+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 23566899999999999999998654211 1123456789999999999999999999999
Q ss_pred CCCCEEEec-CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC--
Q 002342 798 KPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-- 874 (934)
Q Consensus 798 Kp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-- 874 (934)
||+|||++. ++.+||+|||+|...... .......++||+.|||||.+....
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~--------------------------~~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVG--------------------------INYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccc--------------------------cccCCcccccCCCccChHHhhccCCC
Confidence 999999986 589999999999543210 011224567899999999764322
Q ss_pred --------------------CCchhHHHHHHHHHHHHHhCCCCC
Q 002342 875 --------------------HTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 875 --------------------~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
++.++|||||||+||||+++..|+
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~ 379 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS 379 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC
Confidence 334569999999999999976665
No 397
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=245.28 Aligned_cols=198 Identities=26% Similarity=0.402 Sum_probs=159.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCccceeEEEEeC----C
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTK----T 742 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~Iv~l~~~~~~~----~ 742 (934)
.+.++.+.||+|.||.||++.+ .|..||||++... .....++|.+|.+. |+|+||+.|+..-..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 4677889999999999999998 6778999998742 23557778888765 5999999998875432 4
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEEe
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------giiHrDLKp~NILl~~~~~vkl~D 814 (934)
++|||++|.+.|||+|||.+. .++.+....++.-++.||++||-. .|.|||||..|||+.++|.+.|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 789999999999999999873 499999999999999999999953 499999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----C--CchhHHHHHHHHH
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----H--TSAVDWWALGILL 888 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~--s~~~DiwSlG~iL 888 (934)
+|+|.......... .-..+..+||..|||||++...- + -..+||||||+++
T Consensus 360 LGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred ceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99996543221100 01224568999999999996532 2 1279999999999
Q ss_pred HHHHhC----------CCCCCC
Q 002342 889 YEMLYG----------YTPFRG 900 (934)
Q Consensus 889 ~elltG----------~~Pf~~ 900 (934)
||++.. ++||.+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred HHHHHHhhcCCEehhhcCCccc
Confidence 998842 678875
No 398
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93 E-value=4.5e-26 Score=291.38 Aligned_cols=188 Identities=22% Similarity=0.362 Sum_probs=160.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|...+.||+|+||.||++.+..++..||+|.+..... ....|++++++++||||+++++++.+.+..|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 356777889999999999999999999999998864311 1124688999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
||+++|+|.++++. +++.....++.|++.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~--- 833 (968)
T PLN00113 763 EYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC--- 833 (968)
T ss_pred eCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc---
Confidence 99999999999853 788999999999999999999 6699999999999999988887765 66542110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
......||+.|||||++.+..++.++|||||||++|||++|+.||..
T Consensus 834 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 834 ----------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred ----------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 01123688999999999999999999999999999999999999954
No 399
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.93 E-value=1.1e-25 Score=262.36 Aligned_cols=360 Identities=13% Similarity=0.041 Sum_probs=230.9
Q ss_pred HHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC-cEEEEEEEEecC
Q 002342 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (934)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 273 (934)
+++++|+++++|. +|+|++||.++++++||+.+|++|+++..+++++........+...+..+. .+..+.....++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5778999999999 777999999999999999999999999888888766666666666666654 455565555667
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc-CCCCc
Q 002342 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSL 352 (934)
Q Consensus 274 G~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~ 352 (934)
|..+|+.++..++.+ + .+++++.+|||++++.+.+|......+.. +........+....++.... .....
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~~e~-----~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQAMER-----DYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777777777776643 2 25688999999988876655211100000 00011111223333444433 33334
Q ss_pred cc-CCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchhcccccccccccccccccc
Q 002342 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 428 (934)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (934)
+. ...+..+|..+...+|+..+++.|++..+++++......... ....+. . .........+...|. ...+..
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~--~~~~~~~~~~~~~~~-~~~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-A--APVRILLRRSQKRLL-VVVSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-C--cceEEEEcCCCeEEE-EEEEEE
Confidence 43 456777999999999999999999998886654221110000 000010 0 000111111111111 111111
Q ss_pred cCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHc
Q 002342 429 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 508 (934)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~ 508 (934)
.. ++...+. ....|+++++..+++++ ..|+.++++++++|+++|.+|+ |+++|++|++++
T Consensus 226 ~~-~~~~~~l--------------~~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQ-DGESLFL--------------CQLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred Ee-CCceEEE--------------EEEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 11 1111111 12356777776665543 2599999999999999999888 999999999999
Q ss_pred CCC-hhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 509 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 509 Gys-~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
||+ .++++|+++..+.++.... ....+......+.....+..+.+++|..+|+.+++.|+.+..+ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999977666543222 2222333334455556777888999999999999999976554 46888999999
Q ss_pred cccccc
Q 002342 588 EHLEPL 593 (934)
Q Consensus 588 erk~~e 593 (934)
+||+++
T Consensus 363 eR~~~~ 368 (442)
T TIGR02040 363 RRLTMR 368 (442)
T ss_pred hhccCC
Confidence 999874
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-26 Score=234.39 Aligned_cols=198 Identities=25% Similarity=0.381 Sum_probs=161.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEE-EEeCCeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~-~~~~~~~~ 745 (934)
.+.|.|.+.||+|-||.+.+|+++.++..+++|.+.+. ......|.+|..---.| .|.||+.-|++ |++.+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 47899999999999999999999999999999998764 34566778887765555 58899887765 67788899
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--cCCcEEEEecccCcccCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~--~~~~vkl~DFG~a~~~~~ 823 (934)
++|||++-|+|..-+... .+.+.-.+.++.|+++||.|||++++||||||.+||||- +..+|||||||.+...+.
T Consensus 99 F~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999999887653 388999999999999999999999999999999999994 345899999998844221
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-----CCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
+ ....--+..|.+||.+... ...+.+|+|.||+++|.+++|++||
T Consensus 176 --------t----------------------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 --------T----------------------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred --------e----------------------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 0 0111235579999988543 2356899999999999999999999
Q ss_pred CCCC
Q 002342 899 RGKT 902 (934)
Q Consensus 899 ~~~~ 902 (934)
....
T Consensus 226 Qka~ 229 (378)
T KOG1345|consen 226 QKAS 229 (378)
T ss_pred hhhh
Confidence 8543
No 401
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=6.8e-26 Score=225.52 Aligned_cols=230 Identities=23% Similarity=0.313 Sum_probs=193.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~~~~~~ 742 (934)
..+..+.|.++++||+|+||.+|++....+|..||||+-.... ....+..|.++.+.|++ ..|+.+..++....
T Consensus 10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 3456789999999999999999999999999999999876542 22346678999999964 67888888899999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccCc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSC 819 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a~ 819 (934)
+-.|||+++ |.+|.+++... .+.|+..++..++.|++.-++|+|.+++|||||||+|+|+.- ..++.++|||+|+
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred cceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 999999999 99999998765 356999999999999999999999999999999999999963 3568999999997
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
..-+.... ..-+.+......||..|.+-.++.+...+.+.|+-|+|.+|.++..|..||.
T Consensus 163 ky~d~~t~--------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 163 KYRDIRTR--------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred hhcccccc--------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence 65332111 1234455667889999999999999999999999999999999999999999
Q ss_pred C---CCHHHHHHHHHcCCCCCCCC
Q 002342 900 G---KTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 900 ~---~~~~~~~~~i~~~~~~~p~~ 920 (934)
| .+..+.+.+|.+.+...|..
T Consensus 223 glka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 223 GLKAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred ccchhhHHHHHHHHHHhhcCCCHH
Confidence 7 45567788999888877653
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-26 Score=259.66 Aligned_cols=220 Identities=27% Similarity=0.430 Sum_probs=194.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|+++.++|+|.||.||+++++.+++..|+|+++-. ......-+.+|+-+++.++|||||.+++.|-..+.+|+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 46899999999999999999999999999999998743 344556678899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||.||+|.+..+.- +.+++.++.++++..+.+|+|||++|-+|||||=.|||+++.|.+|+.|||.+..+.
T Consensus 91 MEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit----- 163 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT----- 163 (829)
T ss_pred EEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh-----
Confidence 9999999999987653 569999999999999999999999999999999999999999999999999985432
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh---cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......+++||+.|||||+- ..+.|.-.+|+|++|++-.|+--=++|-....++
T Consensus 164 ----------------------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 164 ----------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM 221 (829)
T ss_pred ----------------------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence 123445678999999999997 4567888999999999999999999999899998
Q ss_pred HHHHHHHcCCCCCCC
Q 002342 905 KTFANILHKDLKFPS 919 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~ 919 (934)
..+..+-.-.|+-|.
T Consensus 222 r~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPT 236 (829)
T ss_pred HHHHHhhccCCCCCc
Confidence 888888776666654
No 403
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=7.6e-25 Score=262.78 Aligned_cols=231 Identities=25% Similarity=0.378 Sum_probs=188.8
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccce
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l 734 (934)
.+++..++..+.+.||+|.||.|+++.... ....||+|.++... .......+..|+++|+.+ .||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 344555666777799999999999997632 14579999987653 236678899999999999 59999999
Q ss_pred eEEEEeCCeEEEEEEccCCCCchhhhccCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 002342 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP------------T--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (934)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~--~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~ 800 (934)
++.+...+.+++|+||+..|+|..++...+ . ..++......++.||+.|++||+++++|||||...
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998754 0 13888999999999999999999999999999999
Q ss_pred CEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccC--CCCccchhhhcCCCCCch
Q 002342 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPEIIAGAGHTSA 878 (934)
Q Consensus 801 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~aPE~l~~~~~s~~ 878 (934)
|||++.+..+||+|||+|+........ ......| ...|||||.+....|+.+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y--------------------------~~~~~~~~LP~kWmApEsl~~~~ft~k 501 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYY--------------------------RTKSSAGTLPVKWMAPESLFDRVFTSK 501 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCce--------------------------EecCCCCccceeecCHHHhccCccccc
Confidence 999999999999999999643221110 0011112 345999999999999999
Q ss_pred hHHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHcCCC-CCCCCC
Q 002342 879 VDWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDL-KFPSST 921 (934)
Q Consensus 879 ~DiwSlG~iL~ellt-G~~Pf~~~~-~~~~~~~i~~~~~-~~p~~~ 921 (934)
+||||||++|||+++ |..||.+-. ..++++.+.+|.. ..|...
T Consensus 502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c 547 (609)
T KOG0200|consen 502 SDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHC 547 (609)
T ss_pred chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999997 999999865 6777877777764 667654
No 404
>PRK13560 hypothetical protein; Provisional
Probab=99.92 E-value=1.3e-24 Score=272.76 Aligned_cols=379 Identities=10% Similarity=0.039 Sum_probs=266.2
Q ss_pred ccccccccccchHHHH-HHHHHhccCcEEEEeCCCCCCce--EEcchHHHHHcCCChhhHcCCC--CCCCCCCCCChHHH
Q 002342 176 DEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDV 250 (934)
Q Consensus 176 ~~~~~e~aL~~~~~~~-~~ile~~~d~i~v~D~~~~dG~I--~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~ 250 (934)
.++.++.+|+++++.+ +.+++++|+++++.+..+ +|.+ .++++++..++||...++++.. +..+.+|++.....
T Consensus 54 ~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~~ 132 (807)
T PRK13560 54 ARAIAEAEAQDCREQCERNLKANIPGGMFLFALDG-DGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFFF 132 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEcC-ccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhhh
Confidence 3556778888888888 999999999999988632 3443 3488888889999888877643 33566777655433
Q ss_pred -------HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchh
Q 002342 251 -------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPES 323 (934)
Q Consensus 251 -------~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~ 323 (934)
+.+..++..+.....+++.+++||+ |+.....|.++.+|.. .+.|+++|||++|++|++|+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~------- 202 (807)
T PRK13560 133 ANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA------- 202 (807)
T ss_pred hChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH-------
Confidence 2333444455556678888999996 6677788888888875 6899999999999999988731
Q ss_pred hhHHHHHHHHHhHHHHHHHHHH-ccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCC--CCCcccc
Q 002342 324 LIRYDARQKEMATSSVTELVQA-MKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSY--GGGCRTS 400 (934)
Q Consensus 324 l~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~ 400 (934)
.+.+..+... -......+....++.+|..+...+|++.++++|++..++.+....... .......
T Consensus 203 ------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 270 (807)
T PRK13560 203 ------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFD 270 (807)
T ss_pred ------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhc
Confidence 1112222222 223344556668888999999999999999999999987665322111 0000011
Q ss_pred cccccccchhccccccccccccccccc--ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHH
Q 002342 401 MQRISEVPEKKKQKSGRRSFMGLIGRK--SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATT 477 (934)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~-~~l~~i 477 (934)
......++.....++|+..|+....+. ..+.++...+. .....|||+|++.|++++.. ..|+.+
T Consensus 271 ~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~-------------~~~~~DITerk~~e~~L~~se~~l~~l 337 (807)
T PRK13560 271 ADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGL-------------VGAITDISGRRAAERELLEKEDMLRAI 337 (807)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEE-------------EEEEEechHHHHHHHHHHHHHHHHHHH
Confidence 112223444556778877755444322 22322222221 12467999999999999776 679999
Q ss_pred HHhccccEEEEcCCCCCCCEEEc-cHHHHHHcCCChhhhcCCCCcccCCCCCCHHH-----------------HHHHHHH
Q 002342 478 LERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPAT-----------------VRKIRAA 539 (934)
Q Consensus 478 ~e~~~d~i~v~D~~G~~~~I~~v-N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~-----------------~~~i~~~ 539 (934)
+++++++++++|.+|. ++++ |+++++++||+.++++|+++..+.++...... ...+...
T Consensus 338 ~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (807)
T PRK13560 338 IEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKT 414 (807)
T ss_pred HHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHH
Confidence 9999999999999888 9987 67888899999999999986655432211110 0112233
Q ss_pred HhcCCcE-EEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 540 IDNQTDV-TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 540 l~~~~~~-~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
+..+..+ ..++...+++|..+|+.....|++|.+|.+.+++++++|||++|++|
T Consensus 415 ~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E 469 (807)
T PRK13560 415 IKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVE 469 (807)
T ss_pred HhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHH
Confidence 4555543 35788889999999999999999999999999999999999999854
No 405
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=5.4e-26 Score=260.60 Aligned_cols=226 Identities=27% Similarity=0.366 Sum_probs=174.0
Q ss_pred cccccccccCCcE-EEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEEEE
Q 002342 671 FRPIKPLGSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 671 y~i~~~LG~G~~g-~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
|.-.+.+|.|+.| .||++.. .|+.||||.+-.. ......+|+..|+.- +|||||++|+.-.+..+.||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 4455678999987 5688887 7889999987543 335677899999998 5999999999999999999999
Q ss_pred EccCCCCchhhhccC-CCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CC--cEEEEecccCccc
Q 002342 749 DYCPGGELFLLLDRQ-PTK-VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCLT 821 (934)
Q Consensus 749 E~~~ggsL~~~l~~~-~~~-~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~--~vkl~DFG~a~~~ 821 (934)
|+| ..+|.+++... ... ....-..+.++.|++.||++||+.+||||||||.||||+. ++ .++|.|||+|+.+
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 89999999763 111 1111445678899999999999999999999999999976 33 6899999999776
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
...... ........||-+|+|||++....-..++||+||||++|+.++ |..||-.
T Consensus 662 ~~~~sS------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 662 AGGKSS------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CCCcch------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 432211 122456679999999999999888889999999999999998 5999943
Q ss_pred CCHHHHHHHHHcCCCCCCCCC-CCCcccCCCC
Q 002342 901 KTRQKTFANILHKDLKFPSST-PSSCKAANVP 931 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~~~-~~s~~~k~l~ 931 (934)
..+.-.+|+.+.+..-... ...|.|+||+
T Consensus 718 --~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI 747 (903)
T KOG1027|consen 718 --SLERQANILTGNYTLVHLEPLPDCEAKDLI 747 (903)
T ss_pred --hHHhhhhhhcCccceeeeccCchHHHHHHH
Confidence 3333456777776554321 1233555553
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-24 Score=223.93 Aligned_cols=226 Identities=24% Similarity=0.340 Sum_probs=191.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+..-.|.+.++||+|+||.++++.+.-++.+||||.-... ...-.+..|....+.| ..+.|+.+|-+.+.+.+-
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 5567899999999999999999999999999999975432 3345567788888888 579999999888899999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----cEEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-----~vkl~DFG~a~ 819 (934)
.||||++ |.||.+++.-. ++.|+...+..++.||+.-++|+|++.+|.|||||+|+||...+ .|.++|||+|+
T Consensus 100 iLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 9999999 99999998766 45699999999999999999999999999999999999996433 58899999997
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
...+.... ..-+.+...+..||..||+-..+.+...+.+.|+-|||-++++++.|..||.
T Consensus 178 ~YrDp~Tk--------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 178 EYRDPKTK--------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred hhcCcccc--------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence 75432211 1335566778899999999999999999999999999999999999999998
Q ss_pred C---CCHHHHHHHHHcCCCCCC
Q 002342 900 G---KTRQKTFANILHKDLKFP 918 (934)
Q Consensus 900 ~---~~~~~~~~~i~~~~~~~p 918 (934)
| .+..+.+++|=..+-.-|
T Consensus 238 GLKA~tnK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 238 GLKADTNKEKYEKIGETKRSTP 259 (449)
T ss_pred cccCcchHHHHHHhccccccCC
Confidence 7 566778888866554433
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.5e-25 Score=239.13 Aligned_cols=223 Identities=24% Similarity=0.356 Sum_probs=170.7
Q ss_pred cCCcccccccccCCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
...|.++++||.|.|++||++.+.. .++.||+|.+... +...++.+|+++|..+ .+.||+.+.+.+..+++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3579999999999999999999987 7889999987653 2345688999999999 69999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~ 822 (934)
+++||||++..+..++... ++...++.+++.++.||.++|++|||||||||+|+|++. .++-.|+|||+|....
T Consensus 110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999998888754 788999999999999999999999999999999999975 5788999999997211
Q ss_pred CCC------C----CCCC-cch-hhhccccCCCCcc-ccc----ccccccccccCCCCccchhhhcCC-CCCchhHHHHH
Q 002342 823 CKP------Q----LLLP-TTN-EKKRRHKGQQNPV-FMA----EPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (934)
Q Consensus 823 ~~~------~----~~~~-~~~-~~~~~~~~~~~~~-~~~----~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSl 884 (934)
... . ...+ .+. .......+...+. +.. .+-.......||++|.|||++... ..++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 000 0 0000 000 0000000000000 000 011222345799999999999764 55789999999
Q ss_pred HHHHHHHHhCCCCCCC
Q 002342 885 GILLYEMLYGYTPFRG 900 (934)
Q Consensus 885 G~iL~elltG~~Pf~~ 900 (934)
|++++.++++..||-.
T Consensus 265 GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFK 280 (418)
T ss_pred cceeehhhcccccccc
Confidence 9999999999999864
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6.7e-23 Score=228.56 Aligned_cols=213 Identities=25% Similarity=0.296 Sum_probs=173.2
Q ss_pred CcccccccccCCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCC----CCCccceeEEE-EeCCe
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 743 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~----hp~Iv~l~~~~-~~~~~ 743 (934)
+|++.+.||+|+||.||+|.+..++ ..+|+|+........ ...+..|..++..+. .+++..+++.+ ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997774 789999877532111 115777899988886 36999999999 58889
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-----CcEEEEecccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 818 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-----~~vkl~DFG~a 818 (934)
.||||+.+ |.+|.++......+.|+...+..++.|++.+|++||+.|++||||||+|+++... ..+.|+|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999876666789999999999999999999999999999999999999865 36899999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
+........ +.. ...+-.....+.||..|+++.++.+...+.+.|+||++.++.+|+.|..||
T Consensus 175 r~~~~~~~~-------------~~~----~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 175 RRFKYVGDS-------------GGN----LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred ccccccCCC-------------Ccc----cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 732211100 000 000001124567999999999999999999999999999999999999999
Q ss_pred CCCCH
Q 002342 899 RGKTR 903 (934)
Q Consensus 899 ~~~~~ 903 (934)
.+...
T Consensus 238 ~~~~~ 242 (322)
T KOG1164|consen 238 EALEM 242 (322)
T ss_pred ccccc
Confidence 87654
No 409
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=2.3e-22 Score=207.48 Aligned_cols=185 Identities=39% Similarity=0.655 Sum_probs=159.5
Q ss_pred cccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccCCCCc
Q 002342 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (934)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL 756 (934)
||.|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++|||+.+++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987643211 346788999999999999999999999999999999999998999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccCCCCCCCCCcchhh
Q 002342 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 835 (934)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~~ 835 (934)
.+++.... ..++...+..++.+++.+|.|||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 35899999999999999999999999999999999999999 89999999999854321110
Q ss_pred hccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHH
Q 002342 836 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 891 (934)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~el 891 (934)
......+...|++||.+... .++.+.|+|+||+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 12234578899999999887 788899999999999999
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=4.8e-23 Score=229.47 Aligned_cols=175 Identities=21% Similarity=0.191 Sum_probs=131.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEec-CCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCccc-eeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vAlK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~-l~~~~~~~ 741 (934)
...++|.+.+.||+|+||+||+|+++. +++.+|||.+..... ........+.+|+++|+.++|+|++. +++.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 346789999999999999999999876 688889998753311 12334566889999999999999985 4432
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEEecccCcc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDL-Kp~NILl~~~~~vkl~DFG~a~~ 820 (934)
+..|||||||+|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+.
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 457999999999999632 11 11 1457889999999999999999999 99999999899999999999976
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~ 872 (934)
........ .......-...++++.|+|||.+..
T Consensus 162 ~~~~~~~~-------------------~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 162 FRRRGALY-------------------RIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cccCcchh-------------------hhhhhhhhhhhhccCccCCcccCCh
Confidence 53211000 0000111136678999999999843
No 411
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.88 E-value=3.9e-22 Score=210.79 Aligned_cols=231 Identities=18% Similarity=0.192 Sum_probs=186.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCe-----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+...++++...+-+|.||.||.+.++.... .+-+|.++.+ ..+-++..+..|...|..+.|||+.++.++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 3455778899999999999999997765432 3445655433 24456677889999999999999999998875
Q ss_pred -eCCeEEEEEEccCCCCchhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002342 740 -TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 740 -~~~~~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl 812 (934)
+....+.++.++.-|+|..++.. ...+.++..++..++.|++.|++|||+.|+||.||...|.+|++.-++||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 45677889999989999999872 23356788888899999999999999999999999999999999999999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
+|-.+++..-+.... .......-...||+||.+....|+.++|+||||++||||+
T Consensus 438 tDsaLSRDLFP~DYh-------------------------cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYH-------------------------CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred ccchhccccCccccc-------------------------ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 999998654221111 0111122466899999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCC
Q 002342 893 Y-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (934)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~ 922 (934)
| |+.||..-++.++...+++|. +..|.+.|
T Consensus 493 tlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCP 524 (563)
T KOG1024|consen 493 TLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCP 524 (563)
T ss_pred hcCCCCccccCHHHHHHHHhccceecCCCCCc
Confidence 7 999999999999999999876 46666554
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=3.3e-20 Score=204.22 Aligned_cols=222 Identities=37% Similarity=0.578 Sum_probs=181.8
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC-CccceeEEEEeCCeEEEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~Iv~l~~~~~~~~~~~lV~E 749 (934)
|.+...||.|+|+.||++.+. ..+++|.+.+...........+.+|+.++..+.|+ +++.+++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788899999999999999986 78999999876544444567888999999999988 79999999988888899999
Q ss_pred ccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCCCCC
Q 002342 750 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~~~~ 827 (934)
|+.+++|.+++..... ..+.......++.|++.++.|+|..|++|||+||+||+++..+ .++++|||++.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977665421 2599999999999999999999999999999999999999888 7999999998633211100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~- 903 (934)
. .........+||..|++||.+.+ ..++...|+||+|++++++++|..||.....
T Consensus 159 ~---------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 S---------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred c---------------------cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 0 00013456789999999999988 5788899999999999999999999987764
Q ss_pred ---HHHHHHHHcCCCC
Q 002342 904 ---QKTFANILHKDLK 916 (934)
Q Consensus 904 ---~~~~~~i~~~~~~ 916 (934)
......+.....+
T Consensus 218 ~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 218 SATSQTLKIILELPTP 233 (384)
T ss_pred ccHHHHHHHHHhcCCc
Confidence 4556555554443
No 413
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.85 E-value=4.3e-20 Score=231.89 Aligned_cols=241 Identities=20% Similarity=0.315 Sum_probs=198.2
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC----
Q 002342 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (934)
Q Consensus 186 ~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~---- 261 (934)
..+..+..+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 4456778899999999999998 777999999999999999999999998877777665544455555444433
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHH
Q 002342 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (934)
Q Consensus 262 ~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 341 (934)
.+..+++.+++||+.+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24457888899999999999998873 4455 5678999999987766554331
Q ss_pred HHHHccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhccccccccccc
Q 002342 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (934)
Q Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (934)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEcc
Q 002342 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (934)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN 501 (934)
+..+++.++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 45678889999999999888 99999
Q ss_pred HHHHHHcCCChhhhcCCCCcccCC-CCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEE
Q 002342 502 DSFLELTEYSREEILGRNCRFLQG-PETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (934)
Q Consensus 502 ~a~~~l~Gys~eEliG~~~~~l~~-~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~v 580 (934)
+++++++||+.++++|++...+.+ +.........+...+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 999999999999999998766654 4555555666677777777778888899999999999999999999999999999
Q ss_pred EEEEcCCccccc
Q 002342 581 GVQLDGSEHLEP 592 (934)
Q Consensus 581 gi~rDITerk~~ 592 (934)
++.+|||++|++
T Consensus 243 ~~~~DITerk~~ 254 (799)
T PRK11359 243 MTFSDITEERQI 254 (799)
T ss_pred EEeehhhhHHHH
Confidence 999999999875
No 414
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.85 E-value=2.7e-21 Score=228.14 Aligned_cols=275 Identities=19% Similarity=0.281 Sum_probs=203.5
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (934)
.+.|+.++++++++++++|. +|+++|+|++|++++||++++++|++...+.++.........+...+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46899999999999999998 677999999999999999999999987766666666666777778888888888888
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc
Q 002342 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (934)
Q Consensus 268 ~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~ 347 (934)
..++++|..+|+..++.|+++.+|.+.+++++++|||++++++++|+..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8889999999999999999999999999999999999999998876610
Q ss_pred CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhccccccccccccccccc
Q 002342 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (934)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (934)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHH
Q 002342 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (934)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l 507 (934)
...++.++++++++++++|.+|. ++++|++|+++
T Consensus 129 -------------------------------------------~~~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 129 -------------------------------------------KLLIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred -------------------------------------------HHHHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 01178899999999999999888 99999999999
Q ss_pred cCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcE-EEEEEEEecCCc-EEEEEEEEEeeecCCCCE---------
Q 002342 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 576 (934)
Q Consensus 508 ~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~-~~e~~~~~kdG~-~~wv~~~~~pi~de~G~v--------- 576 (934)
+|+...+..+..+..+.+++..... ......+..+ ..+......+|. .+|+.....++.+..|..
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREAL----AENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhhh----hhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 9999888777654444443332221 1111111121 223444455555 789998888887766653
Q ss_pred EEEEEEEEcCCccccccccCCchhh--HHHHHHHHHHhhhhhhhhcccCCCC
Q 002342 577 QYFIGVQLDGSEHLEPLRNSIPEAT--AEESEKLVKQTAENVNEAVKELPDA 626 (934)
Q Consensus 577 ~~~vgi~rDITerk~~e~~~~~~~~--~~e~~~~vk~~~~~v~~~~~eL~~~ 626 (934)
.+++++++|||++|++|.+.+..+. ..+.....+.+.+.+....+++..+
T Consensus 239 ~~~~~~~~DITe~k~~ee~l~~~al~~~~~~~~~~~~l~~~~~~~~h~lr~p 290 (494)
T TIGR02938 239 PYLLLTIADISNLREEQERARLSALQALMAEEERLEAIRETLSAAIHRLQGP 290 (494)
T ss_pred chheehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcH
Confidence 3456788999999987554332211 1122233344445555555665443
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=9.4e-23 Score=229.78 Aligned_cols=213 Identities=43% Similarity=0.697 Sum_probs=183.5
Q ss_pred ccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEEEEcc
Q 002342 676 PLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
.+|.|+||.|++++.. ..+..||+|++++......... ....|..++..++ ||+++.++..|+.+...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 3799999999998763 4578899999988766655555 6677889999886 999999999999999999999999
Q ss_pred CCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCc
Q 002342 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (934)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 831 (934)
.||.|...+... ..+.+...+.+...++.+++++|+.||+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~-------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK-------- 149 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh--------
Confidence 999999888764 5699999999999999999999999999999999999999999999999999865321
Q ss_pred chhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002342 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 911 (934)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~ 911 (934)
....|||..|||||++. .+...+|+||||++.|+|++|..||.+ ++..+|+
T Consensus 150 -----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 150 -----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred -----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 01128999999999998 677889999999999999999999987 8899999
Q ss_pred cCCCCCCCCCCCCcccCCC
Q 002342 912 HKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 912 ~~~~~~p~~~~~s~~~k~l 930 (934)
...+.+|... +..++++
T Consensus 201 ~~~~~~p~~l--~~~a~~~ 217 (612)
T KOG0603|consen 201 KAELEMPREL--SAEARSL 217 (612)
T ss_pred hhccCCchhh--hHHHHHH
Confidence 9899888764 4444443
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=3.7e-21 Score=199.69 Aligned_cols=174 Identities=17% Similarity=0.142 Sum_probs=135.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhCCCCCccceeEEEEe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~------~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
-.++|.+++.||.|+||.||++.+ ++..+|+|++............. +.+|+..+.++.||+|+.+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 357999999999999999999765 46689999998765544444444 5789999999999999999988764
Q ss_pred C--------CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002342 741 K--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 741 ~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl 812 (934)
. +..+|+|||++|.+|.++.. +++ ....+++.+|..||+.|++|||+||+||+++.+| ++|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 3 35789999999999987731 333 2456999999999999999999999999999888 999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
+|||.+.....+. ...-.+....|..++|+||||+++..+.
T Consensus 176 iDfg~~~~~~e~~---------------------------------------a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRK---------------------------------------AKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchh---------------------------------------hHHHHHHHhHhcccccccceeEeehHHH
Confidence 9999874321100 0011344455667899999999987654
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.84 E-value=2.1e-21 Score=242.15 Aligned_cols=168 Identities=19% Similarity=0.256 Sum_probs=122.1
Q ss_pred hCCC-CCccceeEEEE-------eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 002342 725 MLDH-PFVPALYASFQ-------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 796 (934)
Q Consensus 725 ~l~h-p~Iv~l~~~~~-------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrD 796 (934)
.+.| +||+.++++|. ....++++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 3445 57778888772 334678889988 77999999653 35599999999999999999999999999999
Q ss_pred CCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcc------------cc-ccc-ccccccccCCC
Q 002342 797 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV------------FM-AEP-MRASNSFVGTE 862 (934)
Q Consensus 797 LKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~-~~~~~~~~Gt~ 862 (934)
|||+||||+..|.+|++|||++........... +-.+.|..... .. ..+ .......+||+
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~------ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATT------KSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcc------cccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 999999998888888888887754322111000 00000000000 00 000 01112357899
Q ss_pred CccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 863 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 863 ~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.|||||++.+..|+.++|||||||+||||++|.+||..
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 99999999999999999999999999999999999864
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.5e-20 Score=192.85 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=109.9
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHH-----------------------HHHHHHHHHHHHhCCCCC
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 730 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hp~ 730 (934)
...||+|+||.||+|.+. +|+.||+|++++........ .....+|+++|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999998653211110 112345999999998887
Q ss_pred ccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEEEecCCc
Q 002342 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 809 (934)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yL-H~~giiHrDLKp~NILl~~~~~ 809 (934)
+.....+... . .+|||||++|++|....... ..++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~-~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK-S-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec-C-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544433222 2 38999999887776553332 4589999999999999999999 689999999999999998 588
Q ss_pred EEEEecccCcc
Q 002342 810 VSLTDFDLSCL 820 (934)
Q Consensus 810 vkl~DFG~a~~ 820 (934)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999853
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.4e-19 Score=184.37 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=112.1
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChH-----------------------HHHHHHHHHHHHHhCCCC
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------------------KVHRACAEREILDMLDHP 729 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~hp 729 (934)
+.+.||+|++|+||+|.+. +|+.||||++.+....... ....+..|...+..+.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999999875321000 012235789999999999
Q ss_pred CccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC
Q 002342 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 730 ~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~ 808 (934)
++.....+.... .||||||++|+++....... ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 885554443332 48999999887654432222 347888999999999999999999 9999999999999999 89
Q ss_pred cEEEEecccCccc
Q 002342 809 HVSLTDFDLSCLT 821 (934)
Q Consensus 809 ~vkl~DFG~a~~~ 821 (934)
.++|+|||++...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 9999999999654
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=4.7e-19 Score=180.04 Aligned_cols=203 Identities=20% Similarity=0.196 Sum_probs=143.1
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh-HHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-NKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~-~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.+...|++|+||+||++.. .+.+++.+.+........ -....+.+|+++|++|. |++|+.++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34567899999999998776 677788776654322111 11235788999999995 5889999886 4569999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDL-Kp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|.........
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999998754321 1 1346789999999999999999999 799999999999999999999643321100
Q ss_pred CCCcchhh-hccccCCCCcccccccccccccccCCCCccchhhhcCC-CCC-chhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 828 LLPTTNEK-KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 828 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s-~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. .. ..++ ..... ..-...++.|+.|+...-- ..+ ...++++.|+-+|.++|+..|+++++.
T Consensus 149 ~-----r~L~~rD---------l~~ll-k~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 149 M-----RLLARED---------LRHLL-KHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred H-----HHHHHHH---------HHHHH-HHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 00 0000 00000 0011367889999876332 233 578999999999999999999987653
No 421
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.80 E-value=3.6e-20 Score=217.87 Aligned_cols=208 Identities=37% Similarity=0.611 Sum_probs=155.1
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
.+|..++.|..|+||-||+++++.+.+.||+|+ +++.+ +.+ +||....+|++|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--------ilR--nilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--------ILR--NILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch--------hhh--ccccccCCccee----------------
Confidence 579999999999999999999999999999964 33221 111 166666777776
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|+-...++..+ .++. +++.+++|||+.||+|||+||+|++|+.-|++|++|||+++...-.....
T Consensus 136 -----gDc~tllk~~g--~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNIG--PLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccCC--CCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 33344443322 2332 33789999999999999999999999999999999999997643221111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
...+ ..++ ....-.....||||.|.|||++...+|...+|+|++|+++|+++.|..||.|++.++.+.
T Consensus 201 l~eg-~I~k-----------~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg 268 (1205)
T KOG0606|consen 201 LKEG-HIEK-----------DTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 268 (1205)
T ss_pred hhhc-chHH-----------HHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh
Confidence 0000 0000 001122345699999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCC-CCCcccCCC
Q 002342 909 NILHKDLKFPSST-PSSCKAANV 930 (934)
Q Consensus 909 ~i~~~~~~~p~~~-~~s~~~k~l 930 (934)
.++.....||... ...++++||
T Consensus 269 ~visd~i~wpE~dea~p~Ea~dl 291 (1205)
T KOG0606|consen 269 QVISDDIEWPEEDEALPPEAQDL 291 (1205)
T ss_pred hhhhhhccccccCcCCCHHHHHH
Confidence 9999999999764 334444443
No 422
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=3.3e-20 Score=219.98 Aligned_cols=211 Identities=27% Similarity=0.432 Sum_probs=167.8
Q ss_pred CCc-ccccccccCCcEEEEEEEEecCCeEEEEEEeec---ccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 669 QHF-RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 669 ~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~---~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
..| .....+|.|++|.|+.+........++.|.+.. ...........+..|..+-..+.|||++..+..+......
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~ 396 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI 396 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence 344 456678999999999998887777777776542 1122222333366788888889999998877777665555
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
+-.||||++ +|+.++... ..++...+..+++|++.||+|||..||.||||||+|++++.+|.+||+|||.+..+...
T Consensus 397 ~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 555999988 999999775 34888999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~-~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. .........++|+-.|+|||++.+..|++ .+||||.|++++.|++|+.||.....
T Consensus 474 ~-----------------------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~ 530 (601)
T KOG0590|consen 474 W-----------------------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK 530 (601)
T ss_pred c-----------------------chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccc
Confidence 1 11224456779999999999999999976 79999999999999999999986555
Q ss_pred HH
Q 002342 904 QK 905 (934)
Q Consensus 904 ~~ 905 (934)
.+
T Consensus 531 ~~ 532 (601)
T KOG0590|consen 531 SD 532 (601)
T ss_pred cc
Confidence 43
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=7e-19 Score=212.02 Aligned_cols=199 Identities=24% Similarity=0.342 Sum_probs=161.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCccceeEEEEe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQT 740 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~ 740 (934)
..+....|.|-+.||.|+||+||+|.+.. |+.||||+-+.....+ +.--.+++.+|+ -+.|+.+...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHcc
Confidence 45667899999999999999999999966 9999999877654322 222334444444 2445566666667
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------CCcEEEE
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLT 813 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-------~~~vkl~ 813 (934)
.+..+||+||.+-|+|.+++.. .+.+++..+.++..|||..|+.||..+|||+||||+|+||.. ..-++|+
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred CCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEE
Confidence 7788999999999999999974 567999999999999999999999999999999999999952 3358999
Q ss_pred ecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh
Q 002342 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt 893 (934)
|||.+..+.. ..+.......++|-.|-++|+..|..|++.+|.|.|+.+++.|+.
T Consensus 844 DfG~siDm~l-------------------------fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLF 898 (974)
T KOG1166|consen 844 DFGRSIDMKL-------------------------FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLF 898 (974)
T ss_pred ecccceeeeE-------------------------cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHH
Confidence 9999865431 112234456688999999999999999999999999999999999
Q ss_pred CCC
Q 002342 894 GYT 896 (934)
Q Consensus 894 G~~ 896 (934)
|+.
T Consensus 899 G~y 901 (974)
T KOG1166|consen 899 GKY 901 (974)
T ss_pred HHH
Confidence 864
No 424
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.77 E-value=1.7e-18 Score=175.37 Aligned_cols=119 Identities=26% Similarity=0.342 Sum_probs=99.3
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcch
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 833 (934)
|+|.+++... ...+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6888988754 345999999999999999999999998 999999999999999 998854321
Q ss_pred hhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHc
Q 002342 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILH 912 (934)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~-~~~~~~i~~ 912 (934)
....||+.|||||++.+..++.++|||||||++|+|++|++||..... ...+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 112589999999999999999999999999999999999999976544 344555544
Q ss_pred C
Q 002342 913 K 913 (934)
Q Consensus 913 ~ 913 (934)
+
T Consensus 120 ~ 120 (176)
T smart00750 120 G 120 (176)
T ss_pred H
Confidence 3
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=5.3e-18 Score=175.64 Aligned_cols=135 Identities=22% Similarity=0.226 Sum_probs=106.9
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-----CCCCccceeEEEEeCC---eE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---HV 744 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~---~~ 744 (934)
-...||+|+||.||. ++.++.. +||++.... ....+.+.+|+.+++.+ +||||++++++++++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 346799999999995 7777666 699886532 22346789999999999 6799999999999863 44
Q ss_pred E-EEEEc--cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEEEec----CCcEEEEecc
Q 002342 745 C-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFD 816 (934)
Q Consensus 745 ~-lV~E~--~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL-~yLH~~giiHrDLKp~NILl~~----~~~vkl~DFG 816 (934)
+ +|||| +.+++|.+++... .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 4 78999 5579999999653 26666 35578888887 9999999999999999999974 3379999954
Q ss_pred cC
Q 002342 817 LS 818 (934)
Q Consensus 817 ~a 818 (934)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2e-17 Score=175.56 Aligned_cols=144 Identities=20% Similarity=0.148 Sum_probs=113.3
Q ss_pred CcccccccccCCcEEEEEEE-EecCCeEEEEEEeecccccC-------------------hH--HHHHHHHHHHHHHhCC
Q 002342 670 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLN-------------------RN--KVHRACAEREILDMLD 727 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~-~~~~~~~vAlK~~~~~~~~~-------------------~~--~~~~~~~E~~il~~l~ 727 (934)
.|.+.+.||.|+||.||+|. +..+|+.||+|++....... .. ....+..|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999 66789999999987542110 00 1123568999999997
Q ss_pred CC--CccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEE
Q 002342 728 HP--FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 804 (934)
Q Consensus 728 hp--~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g-iiHrDLKp~NILl 804 (934)
+. .++.++++ ...+|||||++|.+|....... ..+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34444432 2348999999888887665332 33666777899999999999999999 9999999999999
Q ss_pred ecCCcEEEEecccCcc
Q 002342 805 QGNGHVSLTDFDLSCL 820 (934)
Q Consensus 805 ~~~~~vkl~DFG~a~~ 820 (934)
+ ++.++|+|||.+..
T Consensus 183 ~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 183 H-DGKVVIIDVSQSVE 197 (237)
T ss_pred E-CCCEEEEEChhhhc
Confidence 9 88999999999854
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.73 E-value=1.9e-18 Score=203.46 Aligned_cols=201 Identities=23% Similarity=0.288 Sum_probs=156.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccc-ccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+|...+.||++.|=+|.++++.+ | .|++|++-+.. ........+...|++ ...+++||++.+......+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68899999999999999999833 4 48999987653 222233334444555 56679999999988888888889999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
+|. .-+|+|.+..++ .+..-+.+.|+.||+.||..+|..||+|||||.+||||++-+.+.|+||..-+...-
T Consensus 101 qyv-khnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL----- 172 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYL----- 172 (1431)
T ss_pred HHH-hhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccC-----
Confidence 999 789999998764 488999999999999999999999999999999999999999999999987532211
Q ss_pred CCcchhhhccccCCCCc---ccccccccccccccCCCCccchhhhcCCC-----------CCchhHHHHHHHHHHHHHh-
Q 002342 829 LPTTNEKKRRHKGQQNP---VFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY- 893 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-----------~s~~~DiwSlG~iL~ellt- 893 (934)
+.++| .++.+.+ .--.+|+|||.+.... .+++.||||+||++.||++
T Consensus 173 ------------PeDNPadf~fFFDTS------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E 234 (1431)
T KOG1240|consen 173 ------------PEDNPADFTFFFDTS------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE 234 (1431)
T ss_pred ------------CCCCcccceEEEecC------CceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence 11111 1222222 2234899999985422 4678999999999999997
Q ss_pred CCCCCC
Q 002342 894 GYTPFR 899 (934)
Q Consensus 894 G~~Pf~ 899 (934)
|+|||.
T Consensus 235 g~PlF~ 240 (1431)
T KOG1240|consen 235 GRPLFT 240 (1431)
T ss_pred CCCccc
Confidence 899994
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=7.5e-17 Score=168.63 Aligned_cols=138 Identities=21% Similarity=0.236 Sum_probs=114.8
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++.||+|++|.||++.+ ++..+++|.......... .....+.+|+.++..+.|++|+....++...+..+++|
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 35789999999999987 677899998654322211 12345778999999999999888777777778889999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
||++|++|.+++.... . ....++.+++.+|.+||+.|++|+|++|+|||++ ++.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999986431 1 7788899999999999999999999999999999 88999999999854
No 429
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.71 E-value=2.4e-17 Score=176.36 Aligned_cols=201 Identities=23% Similarity=0.282 Sum_probs=132.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC----------CCCccceeEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 739 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~----------hp~Iv~l~~~~~ 739 (934)
.+.....||.|+++.||.|.+..+|+.+|+|++.-.........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4567788999999999999999999999999987554444556677777665544432 223333333332
Q ss_pred e---------C---C-----eEEEEEEccCCCCchhhhcc---CCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002342 740 T---------K---T-----HVCLITDYCPGGELFLLLDR---QPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (934)
Q Consensus 740 ~---------~---~-----~~~lV~E~~~ggsL~~~l~~---~~~--~~l~~~~~~~i~~qil~aL~yLH~~giiHrDL 797 (934)
- . . ..+++|+-+ .++|.+++.. ... ..+.......+..|++..+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1 1 1 236788887 7888877542 111 11222333445589999999999999999999
Q ss_pred CCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC----
Q 002342 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---- 873 (934)
Q Consensus 798 Kp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---- 873 (934)
+|+|++++.+|.++|+||+.....+.. ......+..|.+||.....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~------------------------------~~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR------------------------------YRCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE------------------------------EEGGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce------------------------------eeccCCCcccCChhhhhhhcccC
Confidence 999999999999999999876432110 0001245789999988442
Q ss_pred ----CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 874 ----GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 874 ----~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.++.+.|.|+||++||.|++|..||...
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence 4678999999999999999999999743
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=3.7e-16 Score=161.80 Aligned_cols=133 Identities=18% Similarity=0.197 Sum_probs=107.9
Q ss_pred ccccCCcEEEEEEEEecCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
.||+|+||.||++.. ++..+++|......... ......+.+|++++..+.|+++....-++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 67889999865432211 11235677899999999988766555556666778999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998875421 1 7789999999999999999999999999999 89999999999854
No 431
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.67 E-value=2e-17 Score=167.59 Aligned_cols=224 Identities=18% Similarity=0.283 Sum_probs=175.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
++.....++.+|...-.|..|+++++++ .++.|++.... ......+.|..|.-.|+.+.||||+.+++.+....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~-~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVRE-VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccCc--chhhhhhhhhh-cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 4556778888999999999999999554 56677776432 23445567888888999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEE--EecccCccc
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL--TDFDLSCLT 821 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vkl--~DFG~a~~~ 821 (934)
++..||+-|+|+.+++.+.+...+..++..++.+|+.|++|||+.. |.---|....|+|+.+.+.+| +|--++..
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq- 342 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ- 342 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-
Confidence 9999999999999999987777888999999999999999999983 344468888999998877655 34333311
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCc---hhHHHHHHHHHHHHHhCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~---~~DiwSlG~iL~elltG~~Pf 898 (934)
.....-.|.||+||.+..++-+. ++|+|||.++||||.|...||
T Consensus 343 ---------------------------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 343 ---------------------------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred ---------------------------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 01123578999999998876543 899999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCCcc
Q 002342 899 RGKTRQKTFANILHKDLKFPSSTPSSCK 926 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~ 926 (934)
...++.+.-.+|.-..+.....+.+|..
T Consensus 390 adlspmecgmkialeglrv~ippgis~h 417 (448)
T KOG0195|consen 390 ADLSPMECGMKIALEGLRVHIPPGISRH 417 (448)
T ss_pred ccCCchhhhhhhhhccccccCCCCccHH
Confidence 9999998877775444433333334443
No 432
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=6e-16 Score=160.25 Aligned_cols=139 Identities=21% Similarity=0.152 Sum_probs=108.6
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh-------------------HHHHHHHHHHHHHHhCCCC-
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 729 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp- 729 (934)
.|.+.+.||.|+||.||++... +|+.||||++........ ........|..++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888899999999999999874 799999998765321000 0112356788899998777
Q ss_pred -CccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 730 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 730 -~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
.++.+++ ....++||||++|++|..+... .....++.+++.++.++|+.||+||||||+||+++.++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 4444443 2456899999999998765421 34567889999999999999999999999999999999
Q ss_pred cEEEEecccCccc
Q 002342 809 HVSLTDFDLSCLT 821 (934)
Q Consensus 809 ~vkl~DFG~a~~~ 821 (934)
.++|+|||++...
T Consensus 163 ~~~liDfg~~~~~ 175 (198)
T cd05144 163 KIYIIDWPQMVST 175 (198)
T ss_pred cEEEEECCccccC
Confidence 9999999998543
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=1.5e-15 Score=180.94 Aligned_cols=139 Identities=21% Similarity=0.226 Sum_probs=112.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..|...+.||+|+||.||++.+... .+++|........ .......+.+|+++++.++|++++..+.++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 4567788999999999999987444 3444443222111 11234567899999999999999888777777778
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.++||||++|++|.+++. ....++.+++.+|.|||+.|++||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999998874 346789999999999999999999999999999 578999999999955
No 434
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.63 E-value=4.1e-15 Score=135.79 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.0
Q ss_pred cCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 002342 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (934)
Q Consensus 199 ~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (934)
|++++++|. +|+|+++|++|++++||++++++|+++..++++.........+.+.+..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 77799999999999999999999999998888888888889999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEecchh
Q 002342 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (934)
Q Consensus 279 v~~s~~pi~d~~G~v~~~v~~~~DITe 305 (934)
+.++++|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 435
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.61 E-value=5.7e-15 Score=134.86 Aligned_cols=104 Identities=28% Similarity=0.460 Sum_probs=96.6
Q ss_pred cccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 002342 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (934)
Q Consensus 482 ~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~w 561 (934)
|+|++++|.+|. |+++|++|++++||++++++|+++..+.+++......+.+.+.+..+..+..+..+.+++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999888 99999999999999999999999999999888888889999999988889999999999999999
Q ss_pred EEEEEEeeecCCCCEEEEEEEEEcCCc
Q 002342 562 NLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (934)
Q Consensus 562 v~~~~~pi~de~G~v~~~vgi~rDITe 588 (934)
+.+++.|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 436
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.4e-15 Score=152.94 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=100.1
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHH---------------------HHHHHHHHHHhCCCCC-
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH---------------------RACAEREILDMLDHPF- 730 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~hp~- 730 (934)
+.+.||+|+||.||++.+. +++.||||++.+.......... ....|...+..+.+..
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3568999999999999986 7899999998764321111111 1135666666665443
Q ss_pred -ccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC
Q 002342 731 -VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 731 -Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~ 808 (934)
++.++++ ...++||||++++.+........ .....++.++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhh---hhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 4555543 24589999998855432211110 1116778899999999999999 9999999999999999 89
Q ss_pred cEEEEecccCcc
Q 002342 809 HVSLTDFDLSCL 820 (934)
Q Consensus 809 ~vkl~DFG~a~~ 820 (934)
.++|+|||.+..
T Consensus 152 ~~~liDfg~a~~ 163 (187)
T cd05119 152 KVYIIDVPQAVE 163 (187)
T ss_pred cEEEEECccccc
Confidence 999999999854
No 437
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.59 E-value=1.9e-15 Score=196.43 Aligned_cols=299 Identities=11% Similarity=0.008 Sum_probs=212.6
Q ss_pred eeeeccCCCCCcceEEecccCCCCCCCCCCcccCCCCCceEEEecccccccccccccchHHHHHHHHHhccCcEEEEeCC
Q 002342 129 LVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDAT 208 (934)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~ 208 (934)
..++-.+..|...|+........+..|.+. +.+..+.|||++|++|++++++++.++.+++..+++++.+|.
T Consensus 357 ~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~-------~~i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~- 428 (1092)
T PRK09776 357 MEKRYYRRDGEVVWALLAVSLVRDTDGTPL-------YFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL- 428 (1092)
T ss_pred eeeEEEcCCCCEEEEEEEEEEEECCCCCEe-------eehhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec-
Confidence 344445556666666655554444443332 244455899999999999999999999999999999999998
Q ss_pred CCCCceEEcchHHHHHcCCChhhHcCCC-CCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeee
Q 002342 209 KPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIK 287 (934)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~-~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~ 287 (934)
+|.++++|+++++++||+.++..+.. +..+.+|++.......+...+.++..+..+++.+++|| .+|+.....+++
T Consensus 429 --~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~ 505 (1092)
T PRK09776 429 --KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVL 505 (1092)
T ss_pred --CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEE
Confidence 66799999999999999998854432 22456677777777778888888889999999999999 999999999999
Q ss_pred cCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHH-ccCCCCcccCCCCCcccccCC
Q 002342 288 DDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQA-MKKPRSLSESTNRPPIIRKSE 366 (934)
Q Consensus 288 d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 366 (934)
|.+|.+.+++++.+|||++|+++++|+...+ ....+..+ -......+....+.++|..++
T Consensus 506 d~~G~~~~~ig~~~DITerk~~e~~L~~~~~-------------------~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~ 566 (1092)
T PRK09776 506 NKDGEVERLLGINMDMTEVRQLNEALFQEKE-------------------RLHITLDSIGEAVVCTDMAMKVTFMNPVAE 566 (1092)
T ss_pred CCCCCEEEEEeeeeehhHHHHHHHHHHHHHH-------------------HHHHHHhccccEEEEECCCCeEEEEcHHHH
Confidence 9999999999999999999999998873111 11122222 223344555667888999999
Q ss_pred CCchhhhcccccCCCCCCCCCCCCC--CCCC---Cccccc-ccccccchhcccccccccccccccccccCCCCCCCcccc
Q 002342 367 GGVEEERAGALGRRKSENVPPPRRN--SYGG---GCRTSM-QRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENE 440 (934)
Q Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (934)
...|++.++++|+...+........ .... .+.... ............++|...|+.....+..+.++...+..-
T Consensus 567 ~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~ 646 (1092)
T PRK09776 567 KMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSVL 646 (1092)
T ss_pred HHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEE
Confidence 9999999999999887654321110 0000 000000 011112223456788888888777777766655443332
Q ss_pred ccccCCCCCCCCCCCCCchhhHHHHHhhhh
Q 002342 441 IIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (934)
Q Consensus 441 ~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~ 470 (934)
..+|||+|++.|++++.
T Consensus 647 -------------~~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 647 -------------VIQDVTESRKMLRQLSY 663 (1092)
T ss_pred -------------EEEecchHHHHHHHHHh
Confidence 25799999999998754
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2e-14 Score=152.83 Aligned_cols=137 Identities=23% Similarity=0.341 Sum_probs=104.1
Q ss_pred cccc-cCCcEEEEEEEEecCCeEEEEEEeecccc-----c-----ChHHHHHHHHHHHHHHhCCCCCc--cceeEEEEeC
Q 002342 675 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM-----L-----NRNKVHRACAEREILDMLDHPFV--PALYASFQTK 741 (934)
Q Consensus 675 ~~LG-~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~-----~-----~~~~~~~~~~E~~il~~l~hp~I--v~l~~~~~~~ 741 (934)
..|| .||.|+||.+.. .+..++||.+..... . +......+.+|+.++..|.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3466 888888888877 477899998864221 0 11233567789999999998775 6677664432
Q ss_pred -C---eEEEEEEccCC-CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecc
Q 002342 742 -T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (934)
Q Consensus 742 -~---~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG 816 (934)
. ..++||||++| .+|.+++... .++... +.+|+.+|.+||++||+||||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999987 6888887542 355443 5789999999999999999999999999998999999999
Q ss_pred cCcc
Q 002342 817 LSCL 820 (934)
Q Consensus 817 ~a~~ 820 (934)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8854
No 439
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=2.5e-15 Score=160.01 Aligned_cols=211 Identities=23% Similarity=0.298 Sum_probs=144.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe-----------------------------------EEEEEEeeccc--cc
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----------------------------------YFAMKAMDKGV--ML 708 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----------------------------------~vAlK~~~~~~--~~ 708 (934)
+..++|+|...||+|....||.+....++. +.|||.+-.-. ..
T Consensus 154 FtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~ 233 (598)
T KOG4158|consen 154 FTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSG 233 (598)
T ss_pred cchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCc
Confidence 346799999999999999999987754322 24555432110 01
Q ss_pred ChHHHHHHHHHHH-------HH-------H-------h-CCCCCccceeEEEEe--------------------------
Q 002342 709 NRNKVHRACAERE-------IL-------D-------M-LDHPFVPALYASFQT-------------------------- 740 (934)
Q Consensus 709 ~~~~~~~~~~E~~-------il-------~-------~-l~hp~Iv~l~~~~~~-------------------------- 740 (934)
+...++..-+|.- .+ + . -.|||||.++..|.+
T Consensus 234 ~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g 313 (598)
T KOG4158|consen 234 DAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAG 313 (598)
T ss_pred hHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccC
Confidence 1122222222221 10 1 1 259999999887732
Q ss_pred -CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--cCC--cEEEEec
Q 002342 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDF 815 (934)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~--~~~--~vkl~DF 815 (934)
...+|+||.-+ ..+|..++-.+ ..+....+.++.|+++|+.|||++||.|||+|.+|||+. +++ .+.|.||
T Consensus 314 ~~~tlylvMkrY-~~tLr~yl~~~---~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 314 EPKTLYLVMKRY-RQTLREYLWTR---HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred CCceEEEehhcc-hhhHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccc
Confidence 23589999988 78999998764 367778888999999999999999999999999999994 333 5789999
Q ss_pred ccCcccCCCCCCC-CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC------CchhHHHHHHHHH
Q 002342 816 DLSCLTSCKPQLL-LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILL 888 (934)
Q Consensus 816 G~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~------s~~~DiwSlG~iL 888 (934)
|+|-. +++... .++. ...-..-|.-.-||||+....+- ..++|.|+.|.+-
T Consensus 390 GCcLA--d~~hGlqlpy~--------------------S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Gala 447 (598)
T KOG4158|consen 390 GCCLA--DDNHGLQLPYE--------------------SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALA 447 (598)
T ss_pred ceeee--ccccccccccc--------------------cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhH
Confidence 98732 221111 0000 01112347778999999865321 2389999999999
Q ss_pred HHHHhCCCCCCCCC
Q 002342 889 YEMLYGYTPFRGKT 902 (934)
Q Consensus 889 ~elltG~~Pf~~~~ 902 (934)
||+++..-||.+..
T Consensus 448 YEIfg~~NPFY~rG 461 (598)
T KOG4158|consen 448 YEIFGRSNPFYKRG 461 (598)
T ss_pred HHHhccCCcccccc
Confidence 99999999998743
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=5.4e-14 Score=137.56 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=111.8
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCccceeEEEEeCCeEEEEEEc
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
+++.||.|.++.||++.... ..+++|.+.+... ...+..|..+++.+.+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999843 7899999865421 3567889999999976 5899999988888899999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
+.|..+..+ +......++.+++.+|.+||.. +++|+|++|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988877554 4456677889999999999985 799999999999999989999999999854
No 441
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.52 E-value=2.8e-15 Score=166.80 Aligned_cols=128 Identities=27% Similarity=0.416 Sum_probs=108.2
Q ss_pred CeEEEEEEccCCCCchhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 742 THVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.++||.|++|...+|.+++.+. .....+......++.|+..+++| +|.+|+|+||.||++..+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 3689999999999999999743 34457788889999999999999 9999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt 893 (934)
+.... .........+..+||..||+||.+.+..|+.++||||||++|+||++
T Consensus 406 ~~~~~---------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 406 QDKDE---------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cccCC---------------------cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 43221 01122334556689999999999999999999999999999999997
No 442
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.50 E-value=1.1e-13 Score=127.88 Aligned_cols=110 Identities=25% Similarity=0.335 Sum_probs=100.1
Q ss_pred HHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 002342 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (934)
Q Consensus 478 ~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG 557 (934)
|++++++++++|.+|+ |+++|+++++++|++.++++|+++.++.++.....+...+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999888 9999999999999999999999999999888888888899999998888777666655 99
Q ss_pred cEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 558 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 558 ~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
..+|+.+++.|++|.+|++.+++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 443
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.50 E-value=1.7e-13 Score=126.51 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.3
Q ss_pred HHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 002342 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (934)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 274 (934)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 8889999999999999999999999999888887778888899999999888776665544 99
Q ss_pred cEEEEEEEeeeeecCCCCEEEEEEEEecchhhHH
Q 002342 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (934)
Q Consensus 275 ~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~ 308 (934)
..+|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 444
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.50 E-value=1.7e-13 Score=127.24 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=95.6
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE-EE
Q 002342 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 267 (934)
Q Consensus 189 ~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~-e~ 267 (934)
++|++++++++++++++|. +|+|+|+|++|+++|||+.++++|+++..+.++++.......+.+.+..+..... +.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999998 7779999999999999999999999998887776655677788888877766443 33
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 002342 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (934)
Q Consensus 268 ~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DI 303 (934)
....++|+.+|+.+..+|+++.+|++.+++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 344469999999999999999999999999999997
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.48 E-value=9.3e-15 Score=172.85 Aligned_cols=263 Identities=30% Similarity=0.462 Sum_probs=198.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..+.+.+.+.+-+|+++.++.+.-..++...+.|+..+..............+-.++-...+|.++...-.|......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45788889999999999999999888888888887665433334444455555555555566777776666677788999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
+|+|+.+++|...++.- ++.+.+-++-+...+..+++|||...+.|+|++|.|+|+..+|..++.|||.....+..+.
T Consensus 882 ~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999998775 3578888888889999999999999999999999999999999999999995433222111
Q ss_pred CCCCcchhh--h--ccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 827 LLLPTTNEK--K--RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 827 ~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.....+... . +.......+..............||+.|.+||.+.+......+|+|++|+++++.++|.+||...+
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 100000000 0 011111112222223355667789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC-CCCcccCCCC
Q 002342 903 RQKTFANILHKDLKFPSST-PSSCKAANVP 931 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~-~~s~~~k~l~ 931 (934)
.+++++.|..+..++|... ..+..+++++
T Consensus 1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred hhhhhhccccCCCCCCCCccccChhhhhhh
Confidence 9999999999999999763 4566666554
No 446
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.46 E-value=4.1e-13 Score=124.62 Aligned_cols=111 Identities=22% Similarity=0.331 Sum_probs=95.9
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEE-EEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLI 551 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~-~e~~ 551 (934)
+|+.++++++++++++|.+|+ |+++|++++++|||+.++++|+++..++++++.......+...+..+.... .+..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 489999999999999999888 999999999999999999999999999988776667777777777766543 3444
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcC
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDI 586 (934)
...++|..+|+.++.+|+++.+|++.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 45579999999999999999999999999999997
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=9.8e-15 Score=173.56 Aligned_cols=211 Identities=25% Similarity=0.383 Sum_probs=169.5
Q ss_pred CCcccccccccCCcEEEEEEEEecC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 746 (934)
..|.+.+.||.|+|+.|-++....+ ...+|.|.+.... ........+..|..+-+.+. |.|++.+++...+....++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 4688889999999999998887443 4567777665432 23444555666888888886 9999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 824 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH-~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~ 824 (934)
+++|..|++++..+........+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|......
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999999999999883222224777888899999999999999 99999999999999999999 9999999999654321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccC-CCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
..........+| ++.|+|||.+.+. ......|+||+|+++..+++|..||....
T Consensus 179 ------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~ 234 (601)
T KOG0590|consen 179 ------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPS 234 (601)
T ss_pred ------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccc
Confidence 011223344578 9999999999884 44678999999999999999999997644
Q ss_pred HH
Q 002342 903 RQ 904 (934)
Q Consensus 903 ~~ 904 (934)
..
T Consensus 235 ~~ 236 (601)
T KOG0590|consen 235 RK 236 (601)
T ss_pred cc
Confidence 43
No 448
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.42 E-value=2.2e-13 Score=159.14 Aligned_cols=258 Identities=9% Similarity=-0.003 Sum_probs=171.8
Q ss_pred CceEEEecccccccc-----------cc---cccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhh
Q 002342 166 NSVRSSGEMSDEGGK-----------EK---GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 231 (934)
Q Consensus 166 ~~~~~~~dit~~~~~-----------e~---aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eE 231 (934)
+.+.+..|||+.++. |+ +|++++++|+.++++++++++++|.. +|+|+++|++|++++||+.+|
T Consensus 96 ~~~~i~rDi~~~~~~~~~l~~~~~~~e~~~~~l~~~e~r~~~l~e~~~~~i~~~d~~--~g~i~~~N~a~~~l~G~~~~e 173 (442)
T TIGR02040 96 GVLALGRDLRAVAELQQQLVAAQQAMERDYWTLREMETRYRVVLEVSSDAVLLVDMS--TGRIVEANSAAAALLGGVGQS 173 (442)
T ss_pred eEEEEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEECC--CCEEEEEcHHHHHHhCcCHHH
Confidence 355667998875543 22 67778889999999999999999972 567999999999999999999
Q ss_pred HcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHH
Q 002342 232 VVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (934)
Q Consensus 232 llG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (934)
++|+++..++++++.......+......+.....++. .++|...| .+.++++.. +|. ..+++.+.|||++++++.
T Consensus 174 l~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~~~~~~-~~~~~~~~~-~~~-~~~l~~~~dit~~~~~e~ 248 (442)
T TIGR02040 174 LVGRAFPQEFEGRRREELMLTLRNVRATGSAAPVRIL--LRRSQKRL-LVVVSVFRQ-DGE-SLFLCQLSPAGATQPVGD 248 (442)
T ss_pred HcCCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEE--EcCCCeEE-EEEEEEEEe-CCc-eEEEEEEcccchhhhhhH
Confidence 9999988777777666666777777777765554544 33444444 445666654 333 457788999999988776
Q ss_pred HhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCCCCcccCCCCCcccccCCCCchhh-hcccccCCCCCCCCCCCC
Q 002342 312 DKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGGVEEE-RAGALGRRKSENVPPPRR 390 (934)
Q Consensus 312 ~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 390 (934)
+++. .....+..+-+.+...+....+..+|..+...+|+. .++++|++...++.....
T Consensus 249 ~~~~---------------------~~~~l~e~~~d~I~v~D~~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~ 307 (442)
T TIGR02040 249 ELSE---------------------NLARLYHEAPDAIVFSDADGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV 307 (442)
T ss_pred HHHH---------------------HHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc
Confidence 5430 011123333344455566668888999999999997 578999998776542211
Q ss_pred CC-CCCCcccccccccccchhcccccccccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHH
Q 002342 391 NS-YGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQK 466 (934)
Q Consensus 391 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~ 466 (934)
.. ..............+......++|+.+|+.....+..+.++. .... ..+|||+|++.+.
T Consensus 308 ~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~~-~~~~--------------v~rDITeR~~~~~ 369 (442)
T TIGR02040 308 DLRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGERP-LIVL--------------VIRDISRRLTMRD 369 (442)
T ss_pred cHHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCce-EEEE--------------EEecchhhccCCC
Confidence 10 000000111122234444568899999999888777664432 2222 2478898877743
No 449
>PRK13557 histidine kinase; Provisional
Probab=99.41 E-value=2.4e-12 Score=154.09 Aligned_cols=132 Identities=37% Similarity=0.739 Sum_probs=120.4
Q ss_pred cccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc
Q 002342 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (934)
Q Consensus 183 aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 262 (934)
.....+..|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (540)
T PRK13557 24 VSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERRE 103 (540)
T ss_pred hhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCC
Confidence 34456789999999999999999987778999999999999999999999999998888887777778888888888888
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 263 ~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
+..+++.++++|+.+|+.+++.|+.+.+|.+++++++.+|||++++++++++
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 104 IATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred ceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 8888888899999999999999999999999999999999999999988765
No 450
>PRK13559 hypothetical protein; Provisional
Probab=99.41 E-value=5.8e-12 Score=143.08 Aligned_cols=129 Identities=40% Similarity=0.748 Sum_probs=114.6
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE
Q 002342 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (934)
Q Consensus 186 ~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (934)
.+.+.|+.++++++++|+++|..+.+|.|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 45677899999999999999987667889999999999999999999999988777766666667778888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 266 e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
+...+++||..+|+.+++.|+++.+|.+.+++++++|||++|+++++++
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~ 168 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEA 168 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHH
Confidence 8888999999999999999999999999999999999999998876543
No 451
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.39 E-value=1.1e-12 Score=164.45 Aligned_cols=140 Identities=13% Similarity=0.127 Sum_probs=128.0
Q ss_pred ecccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHH
Q 002342 172 GEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVA 251 (934)
Q Consensus 172 ~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~ 251 (934)
.+|+++++++++++++++.++.++++++++++++|. +|+|+++|++|++++||+.++++|+++..+++++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 688999999999999999999999999999999998 77799999999999999999999999887777766666666
Q ss_pred HHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 252 ~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
.....+..+..+..+.+..++||..+|+.++..|+++.+|.+.|++++++|||++|+++++++
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~ 277 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALE 277 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHH
Confidence 667778888888888888999999999999999999999999999999999999999998876
No 452
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.38 E-value=2.5e-12 Score=161.10 Aligned_cols=136 Identities=14% Similarity=0.107 Sum_probs=122.7
Q ss_pred CCCchhhHHHHHhhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHH
Q 002342 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (934)
Q Consensus 455 ~~dv~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~ 533 (934)
.+++++|+..+++++.. ..++.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+++++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 46788888888888666 6799999999999999999888 9999999999999999999999998888887666666
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 534 ~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
......+..+..+..+.+..+++|..+|+.++..|+++.+|.+.+++++++|||++|+++
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e 273 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQ 273 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHH
Confidence 777777888888899999999999999999999999999999999999999999999864
No 453
>PRK13559 hypothetical protein; Provisional
Probab=99.37 E-value=1e-11 Score=141.07 Aligned_cols=122 Identities=44% Similarity=0.808 Sum_probs=108.9
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
..|+.++++++++|+++|.+|.+++|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+..
T Consensus 43 ~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 122 (361)
T PRK13559 43 RLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELL 122 (361)
T ss_pred hHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEE
Confidence 34888999999999999986655669999999999999999999999988777777777767777888888888888999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
..+++|..+|+.++..|+++.+|.+.+++++++|||++|+++
T Consensus 123 ~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e 164 (361)
T PRK13559 123 NYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVR 164 (361)
T ss_pred EEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhH
Confidence 999999999999999999999999999999999999999854
No 454
>PRK13557 histidine kinase; Provisional
Probab=99.36 E-value=5e-12 Score=151.36 Aligned_cols=124 Identities=43% Similarity=0.815 Sum_probs=111.9
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
..|..+++.++++|+++|.++.+++|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+.+
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 45999999999999999975555669999999999999999999999998888888877778888888888888888888
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccccc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~ 595 (934)
..+++|+.+|+.+++.|+++.+|.+++++++.+|||++++++..
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~ 153 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDA 153 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHH
Confidence 89999999999999999999999999999999999999986543
No 455
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=2.4e-12 Score=148.63 Aligned_cols=142 Identities=23% Similarity=0.284 Sum_probs=98.1
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---------------------------HHH----------HHH
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------------------NKV----------HRA 716 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---------------------------~~~----------~~~ 716 (934)
.+.||+|++|+||+|+. .+|+.||||+.+++....- ... -.+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 36799999999999987 5789999999876421100 000 013
Q ss_pred HHHHHHHHhCC-----CCCc--cceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 002342 717 CAEREILDMLD-----HPFV--PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLH 788 (934)
Q Consensus 717 ~~E~~il~~l~-----hp~I--v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~-aL~yLH 788 (934)
.+|...+..+. +++| ++++. ...+..+|||||++|++|.++....... .. ...++.+++. .+..+|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHH
Confidence 34555555542 3433 33332 2234578999999999998876532111 22 2345566655 478899
Q ss_pred HCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 789 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 789 ~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|++|+|+||.||+++.+|+++++|||++....
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999999986543
No 456
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.33 E-value=6e-13 Score=155.25 Aligned_cols=147 Identities=18% Similarity=0.235 Sum_probs=97.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC---------------------------h----HHHHH-
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------------------R----NKVHR- 715 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~---------------------------~----~~~~~- 715 (934)
...|.. +.||+|++|+||+|+.+.+|+.||||+.+++.... . +..+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456777 79999999999999998889999999998652100 0 01111
Q ss_pred -----HHHHHHHHHhC----CCCCccceeEEEE-eCCeEEEEEEccCCCCchhhh--ccCCC--CCCCHHHHHHHHHHHH
Q 002342 716 -----ACAEREILDML----DHPFVPALYASFQ-TKTHVCLITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVV 781 (934)
Q Consensus 716 -----~~~E~~il~~l----~hp~Iv~l~~~~~-~~~~~~lV~E~~~ggsL~~~l--~~~~~--~~l~~~~~~~i~~qil 781 (934)
+.+|...+.++ .+...+.+-.+|. ..+..+|||||++|+.|.++. ...+. ..+.+..+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 22344444333 2333233323332 245678999999999997752 22110 124444444444444
Q ss_pred HHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecccCcccC
Q 002342 782 VALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLTS 822 (934)
Q Consensus 782 ~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFG~a~~~~ 822 (934)
+..|++|+|+||.||+++.+| +++++|||++...+
T Consensus 277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 458999999999999999888 99999999986543
No 457
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.31 E-value=7.5e-12 Score=142.47 Aligned_cols=164 Identities=25% Similarity=0.381 Sum_probs=130.4
Q ss_pred HHhCCCCCccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCCCC
Q 002342 723 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 801 (934)
Q Consensus 723 l~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~gi-iHrDLKp~N 801 (934)
|+.+.|.|+.++++.+.++...++|.+||.-|+|.+.+... ...++.-....++++|+.||+|||.-.| .|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 45789999999999999999999999999999999999763 3457777788889999999999999865 999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-------
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 874 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------- 874 (934)
.+++....+||.|||+......... ........-..-|.|||.+.+..
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------ccccchhHHHHhccCHHHhccccccccccc
Confidence 9999999999999999855422000 00001112345699999997642
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCC----CCHHHHHHHHHc
Q 002342 875 HTSAVDWWALGILLYEMLYGYTPFRG----KTRQKTFANILH 912 (934)
Q Consensus 875 ~s~~~DiwSlG~iL~elltG~~Pf~~----~~~~~~~~~i~~ 912 (934)
.+.+.|+||||++++|+++.+.||.. ....+++.++.+
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~ 176 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK 176 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 35579999999999999999999975 222456667666
No 458
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.27 E-value=4.8e-11 Score=146.88 Aligned_cols=127 Identities=39% Similarity=0.747 Sum_probs=114.7
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEE
Q 002342 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (934)
Q Consensus 189 ~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~ 268 (934)
..++.+++.+++++++.|..+.+|.|+|+|+++++++||+.++++|+++..+.++.........+...+..+..+..+++
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 45678999999999999876668889999999999999999999999988777777766667778888888888889999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhc
Q 002342 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 269 ~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998874
No 459
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.27 E-value=8.2e-11 Score=119.98 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=101.7
Q ss_pred ccccccCCcEEEEEEEEec------CCeEEEEEEeecccc--c--------C---------hHHHHHHH----HHHHHHH
Q 002342 674 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVM--L--------N---------RNKVHRAC----AEREILD 724 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~------~~~~vAlK~~~~~~~--~--------~---------~~~~~~~~----~E~~il~ 724 (934)
...||.|.-+.||.+.... .+..+|||+++.... . + ......+. +|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999998643 357999998864221 0 0 11122233 7999999
Q ss_pred hCCC--CCccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCC
Q 002342 725 MLDH--PFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPEN 801 (934)
Q Consensus 725 ~l~h--p~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yL-H~~giiHrDLKp~N 801 (934)
++.. -+++.++++ ...+|||||+.+..+.....+. ..++...+..++.+++.+|..| |+.||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 9853 567777764 4568999999665443222121 2356667778889999999999 89999999999999
Q ss_pred EEEecCCcEEEEecccCcc
Q 002342 802 VLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~ 820 (934)
||++ ++.+.|+|||-+..
T Consensus 156 IL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred EEEE-CCcEEEEECCCcee
Confidence 9997 57899999998844
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=3.1e-11 Score=121.36 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=96.0
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-ccceeEEEEeCCeEEEEEEccC
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
++.|+.|.++.||++.. .+..|++|+...... ....+..|..+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 35689999999999987 477899998765321 1224567899999886544 445655443 34579999999
Q ss_pred CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEEEecCCcEEEEecccCc
Q 002342 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~gi-----iHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
|.++.... . ....++.+++.+|+.||+.++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98876430 1 113456899999999999985 9999999999999 6789999999984
No 461
>PRK10060 RNase II stability modulator; Provisional
Probab=99.21 E-value=1.1e-10 Score=142.84 Aligned_cols=139 Identities=12% Similarity=0.163 Sum_probs=111.6
Q ss_pred cccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCC-CCCCCCCChHHHH
Q 002342 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR-FLQGAGTDPEDVA 251 (934)
Q Consensus 173 dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~-~l~~~~~~~~~~~ 251 (934)
++++.......+......++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++. .+.+++.......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~ 171 (663)
T PRK10060 95 AWHDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHH
Confidence 34444444555667777889999999999999999 7779999999999999999999999975 4445555555667
Q ss_pred HHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCC-CEEEEEEEEecchhhHHHHHHhhc
Q 002342 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 252 ~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G-~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
.++..+..+..|.++.+.++++|..+|+.....+ .+..| ...+++++.+|||++++++++++.
T Consensus 172 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~ 235 (663)
T PRK10060 172 NIRGFFRSGNAYEVERWIKTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRI 235 (663)
T ss_pred HHHHHHhcCCceEEEEEEEeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHH
Confidence 7778888888899999999999999998766444 44444 456788999999999999988764
No 462
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.19 E-value=2e-10 Score=144.56 Aligned_cols=142 Identities=14% Similarity=0.182 Sum_probs=118.8
Q ss_pred CceEEEecccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCC-CCCC
Q 002342 166 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFL-QGAG 244 (934)
Q Consensus 166 ~~~~~~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l-~~~~ 244 (934)
..++++.|||++++.+ +.++.+..++++++++++++|. +|+++++|+++++++||+.++++|+++..+ .++.
T Consensus 117 ~~~~~~~DiT~~~~~~----~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~ 189 (799)
T PRK11359 117 YYLALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 (799)
T ss_pred EEEEEEeeccchhhhH----HHHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCC
Confidence 3566779999876644 4456677889999999999998 777999999999999999999999987644 4455
Q ss_pred CChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 245 TDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 245 ~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
........+...+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++.+|||+++++++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred CcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 5555666677777777777888888999999999999999999999999999999999999998876543
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.18 E-value=1.7e-10 Score=132.29 Aligned_cols=184 Identities=17% Similarity=0.226 Sum_probs=134.4
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEc
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 750 (934)
|++ ....-++.+..-.+..+.++.++.++.++... ........+-++-|+.++||||+++++.++.++..|||+|-
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeec
Confidence 444 33333333322234556778888888876542 23455677888999999999999999999999999999999
Q ss_pred cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH-~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
+ ..|..+++. ++...+...+.||+.||.||| ..+++|++|.-+.|+++..|..||++|.++......+.
T Consensus 91 V--~Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--- 160 (690)
T KOG1243|consen 91 V--RPLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--- 160 (690)
T ss_pred c--ccHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---
Confidence 8 456667765 346677778999999999998 45899999999999999999999999998844321110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhC
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG 894 (934)
.......--.|..|+.+....+ ..|.|-|||++++++.|
T Consensus 161 ------------------------~~~~~~~~~s~~~P~~~~~s~~--s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 ------------------------PAKSLYLIESFDDPEEIDPSEW--SIDSWGLGCLIEELFNG 199 (690)
T ss_pred ------------------------ccccchhhhcccChhhcCcccc--chhhhhHHHHHHHHhCc
Confidence 0011112224666766544433 46999999999999999
No 464
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.17 E-value=2e-10 Score=112.13 Aligned_cols=146 Identities=19% Similarity=0.201 Sum_probs=110.6
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEee-----cccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMD-----KGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~-----~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+..|-+|+-+.|+.+.+ .|+.++||.=- ...+..+-...+..+|+++|.++.--.|.-..=+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567788999999999987 78888888422 22233344566788999999998655554444456666677899
Q ss_pred EEccCC-CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecccCcc
Q 002342 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (934)
Q Consensus 748 ~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~DFG~a~~ 820 (934)
|||++| .++.+++...............++.+|-..|.-||.++|||+||..+||++.++| .+.++|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999976 4788888765444344444477889999999999999999999999999998765 348999999854
No 465
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.14 E-value=5.2e-10 Score=137.73 Aligned_cols=121 Identities=40% Similarity=0.759 Sum_probs=107.4
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
++.+++.+++++++.|..+.++.|+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+.+.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 56789999999999986444455999999999999999999999998888887777666777777888888889999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccc
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~ 594 (934)
+++|..+|+.++..|+++.+|.+.+++++++|||++|++|.
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~ 270 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAEL 270 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999644
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=3e-11 Score=137.56 Aligned_cols=210 Identities=23% Similarity=0.231 Sum_probs=163.9
Q ss_pred cccCCccccccccc--CCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~--G~~g~Vy~a~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~ 740 (934)
...+.+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. .........-.+|..-...+ .|++.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 44567888899999 99999999999 889999999974432 11222233344566666666 48999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEEEecC-CcEEEEec
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDF 815 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~----aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DF 815 (934)
.+..|+-+|+| +.+|..+.... ...++...++.++.+... ||.++|..+++|-|+||.||++..+ ..++++||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 99999999999 78888887653 345889999999999999 9999999999999999999999998 78999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
|+...++..+.. .........-|...|++||.+.+. ++...|+++||.++.+-.+|.
T Consensus 268 ~~v~~i~~~~~~----------------------~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 268 GLVSKISDGNFS----------------------SVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred ceeEEccCCccc----------------------cceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhc
Confidence 998665432211 001111222477789999998755 678899999999999999887
Q ss_pred CCCCCC
Q 002342 896 TPFRGK 901 (934)
Q Consensus 896 ~Pf~~~ 901 (934)
.++...
T Consensus 325 ~~~~~g 330 (524)
T KOG0601|consen 325 HLPSVG 330 (524)
T ss_pred ccccCC
Confidence 766543
No 467
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.14 E-value=5.8e-10 Score=100.36 Aligned_cols=121 Identities=20% Similarity=0.406 Sum_probs=98.1
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcC-CcEEEE
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGR 266 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~~~e 266 (934)
++.++.+++.++++++++|. +|.++++|+++++++|++.++++|+.+..+.++.........+...+..+ ......
T Consensus 2 ~~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (124)
T TIGR00229 2 EERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEE 78 (124)
T ss_pred chHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceE
Confidence 35788899999999999998 67799999999999999999999998876666665555555555555533 223344
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHH
Q 002342 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (934)
Q Consensus 267 ~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (934)
+....++|..+|+..+..|+. .+|...++++++.|||++++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 79 RRVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 555588999999999999998 788899999999999999988765
No 468
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=3.4e-10 Score=111.32 Aligned_cols=134 Identities=21% Similarity=0.213 Sum_probs=100.3
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
..+++|+-+.+|.+.+ -|..+++|.=.++..- .+-...+..+|..++..+..-.|...+=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999866 4445778754333222 22334566789999999876555544445566677789999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
|++|..|.+++... ...++..+=.-+.-||..||||+||.++||+++.+ .+.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence 99999998888653 13456677777888999999999999999999855 499999999853
No 469
>PRK10060 RNase II stability modulator; Provisional
Probab=99.13 E-value=4.8e-10 Score=137.34 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=95.6
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccC-CCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
++.+++.++++|+++|.+|+ |+++|+++++++||+.+|++|+++..++ ++.+.......+...+..+..+..|.++
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67889999999999999888 9999999999999999999999976554 4544455566777778888889999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCC-EEEEEEEEEcCCcccccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGE-VQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~-v~~~vgi~rDITerk~~e 593 (934)
.+++|..+|+..... +.+..|. ..+++++.+|||++|+++
T Consensus 190 ~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e 230 (663)
T PRK10060 190 KTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQ 230 (663)
T ss_pred EeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHH
Confidence 999999999876544 4444554 467889999999999853
No 470
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.10 E-value=2.4e-10 Score=134.91 Aligned_cols=117 Identities=26% Similarity=0.438 Sum_probs=105.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
|+.+++.++++++++|.+|+ ++++|+++++++||++++++|++...+.++.........+...+..+..+..+....
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999888 999999999999999999999987777776666666777777777788888888888
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
+++|..+|+..++.|+++.+|.+.+++++++|||++|+++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e 122 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLE 122 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHH
Confidence 9999999999999999999999999999999999999853
No 471
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.03 E-value=1.2e-09 Score=97.55 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.8
Q ss_pred EEEccHHHHHHcCCChhhhcCCC----CcccCCCCCCHHHHHHHHH-HHhcCCcEEEEEEEEecCCcEEEEEEEEEeeec
Q 002342 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (934)
Q Consensus 497 I~~vN~a~~~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~i~~-~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d 571 (934)
|+|||+++++++||+++++ +.. +..++||++...+.+.+.. .+..+..+..++++++++|+.+|+..+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 7788999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002342 572 QKGEVQYFIGVQ 583 (934)
Q Consensus 572 e~G~v~~~vgi~ 583 (934)
.+|+++.++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
No 472
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.02 E-value=2.5e-09 Score=96.17 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=95.4
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcC-CcEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~-~~~~~e~~~ 552 (934)
++.+++.++++++++|.+|. ++++|+++++++|++.++++|+++..+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999888 99999999999999999999999877777766655555555555533 234445555
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
..++|..+|+.....|+. .+|...+++++++|||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~ 120 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQA 120 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHH
Confidence 688999999999999998 788899999999999999874
No 473
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.02 E-value=1.3e-09 Score=97.29 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=74.0
Q ss_pred eEEcchHHHHHcCCChhhHcCCC----CCCCCCCCCChHHHHHHHH-HHhcCCcEEEEEEEEecCCcEEEEEEEeeeeec
Q 002342 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (934)
Q Consensus 214 I~~~N~a~~~l~Gys~eEllG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d 288 (934)
|+|+|+.+++++||+++++ |.. +..+.+|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6678899999999999999 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002342 289 DEGKVLKFIGMQ 300 (934)
Q Consensus 289 ~~G~v~~~v~~~ 300 (934)
++|++.+++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.00 E-value=1.4e-10 Score=132.21 Aligned_cols=199 Identities=21% Similarity=0.278 Sum_probs=154.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEe-cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
....+|..+..||.|.|+.|+.+... .++..|++|.+.+......++.. -..|+-+...+ .|.+++.++..+....+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccccc
Confidence 44678999999999999999998765 67889999988776544444433 33466666666 58999999888888888
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~~ 822 (934)
.|+-.|||+++++...+.. ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||.+..+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 8999999999988766632 3458888999999999999999999999999999999999876 788999999884321
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCcc--chhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~--aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
... ..+.+.-+++ ++..+....+..+.|++|||..+.+.++|.+.
T Consensus 419 ~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 419 FSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred eec------------------------------ccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 110 1122333444 55555667788899999999999999988654
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.99 E-value=2.9e-09 Score=111.82 Aligned_cols=140 Identities=23% Similarity=0.305 Sum_probs=106.9
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCccceeEEEEeC---CeEEEEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 749 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~---~~~~lV~E 749 (934)
+.|+.|.++.||++... +|..|++|+....... .....+..|..+++.+.+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999873 3678999987653211 134567889999999975 4467777776653 36789999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 789 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~---------------------------------------- 789 (934)
|++|.++...+.. ..++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988876532 236777777778888888888873
Q ss_pred ----------------CCCeecCCCCCCEEEec--CCcEEEEecccCcc
Q 002342 790 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 820 (934)
Q Consensus 790 ----------------~giiHrDLKp~NILl~~--~~~vkl~DFG~a~~ 820 (934)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998843
No 476
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.88 E-value=2.1e-08 Score=113.39 Aligned_cols=221 Identities=18% Similarity=0.202 Sum_probs=153.2
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEe
Q 002342 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (934)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (934)
+.+++.+.++++++|.. ..|..+|..+..+++-....++|+++..+.++...+.. . .+..+........
T Consensus 4 ~~~l~~~~~~~~vi~~~---~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v-------~-~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDKN---TGIDVANALALAKRQKNAEAVIGRPLREILETLGMERV-------E-QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEcC---CceeeechHHHHhhhcceEEEecccceeeccccCccee-------e-ccCccceeeeeec
Confidence 45899999999999984 44999999999999999999999988766555443221 1 2222222223333
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCCCC
Q 002342 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (934)
Q Consensus 272 kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 351 (934)
+ + .. ..+...++.++.|+++|++.++.|+++..+.-.+..
T Consensus 73 ~-~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~l------------------------------------- 112 (560)
T COG3829 73 K-V-KR-IVVVGKTPVDEQGRVVGVLEVFLDISEALELIEENL------------------------------------- 112 (560)
T ss_pred c-c-ee-EEEcCCceeecCCceeeeehhhhhhHHHHHHHHHHH-------------------------------------
Confidence 3 3 22 233344456778899999999999998544332210
Q ss_pred cccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccccccccccccccccCC
Q 002342 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (934)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (934)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCC
Q 002342 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (934)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys 511 (934)
++.+ ..|+.+++.+.++++++|.+|. ++++|.++..++|++
T Consensus 113 -------------------------------~~~~-----~~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 113 -------------------------------RQLR-----QRLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred -------------------------------HHHH-----HHHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 0001 1289999999999999999999 999999999999999
Q ss_pred hhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 512 ~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
.++++|++..++.....+ ......+..+.+.......+. |... ..+..|++ .+|.+.|.+++++|+++-+.
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~--~~~~--i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYN--GNKI--IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeec--CCce--eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999997766511111 123445666766554444333 3222 34456665 56799999999999998766
No 477
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.86 E-value=2.1e-08 Score=102.01 Aligned_cols=127 Identities=24% Similarity=0.207 Sum_probs=82.3
Q ss_pred EEEEEEEecCCeEEEEEEeeccccc-----------------------ChHHHHHHHHHHHHHHhCCCC--CccceeEEE
Q 002342 684 SVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKVHRACAEREILDMLDHP--FVPALYASF 738 (934)
Q Consensus 684 ~Vy~a~~~~~~~~vAlK~~~~~~~~-----------------------~~~~~~~~~~E~~il~~l~hp--~Iv~l~~~~ 738 (934)
.||.|.. .+|..+|||+.+..... .........+|.++|..+..- +++.++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 56789999988642110 011123456799999999765 567776543
Q ss_pred EeCCeEEEEEEccC--CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 739 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 739 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~y-LH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
..+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+||
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 3369999997 55555443321 2244566778888885555 578999999999999999966 9999999
Q ss_pred ccCcc
Q 002342 816 DLSCL 820 (934)
Q Consensus 816 G~a~~ 820 (934)
|.+..
T Consensus 151 ~qav~ 155 (188)
T PF01163_consen 151 GQAVD 155 (188)
T ss_dssp TTEEE
T ss_pred Cccee
Confidence 98843
No 478
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.85 E-value=4.5e-08 Score=105.50 Aligned_cols=133 Identities=19% Similarity=0.060 Sum_probs=94.4
Q ss_pred EEEEEEecCCeEEEEEEeecccccC--h------HHHHHHHHHHHHHHhCCCCCc--cceeEEEEe-----CCeEEEEEE
Q 002342 685 VHLVELCGSGQYFAMKAMDKGVMLN--R------NKVHRACAEREILDMLDHPFV--PALYASFQT-----KTHVCLITD 749 (934)
Q Consensus 685 Vy~a~~~~~~~~vAlK~~~~~~~~~--~------~~~~~~~~E~~il~~l~hp~I--v~l~~~~~~-----~~~~~lV~E 749 (934)
|+.+.. .|+.|.||......... + .......+|...+..|..-+| +.+..++.. ....+||||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 555544 67789999775332110 0 011136688888888744333 344555543 235789999
Q ss_pred ccCCC-CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------CCcEEEEecccCc
Q 002342 750 YCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 819 (934)
Q Consensus 750 ~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-------~~~vkl~DFG~a~ 819 (934)
++++. +|.+++........+......++.+++..+.-||..||+|+|++++|||++. ++.+.++||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99876 7888875322234667788899999999999999999999999999999985 4689999999874
No 479
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.81 E-value=1.2e-07 Score=80.78 Aligned_cols=103 Identities=27% Similarity=0.422 Sum_probs=89.0
Q ss_pred ccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (934)
Q Consensus 481 ~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~ 560 (934)
++++++++|.+|. ++++|+++++++|++.++++|+....++++.........+...+..+.....+......+|..+
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999888 9999999999999999999999987888877776666666666666666778888888899999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEEcC
Q 002342 561 WNLFHLQPMRDQKGEVQYFIGVQLDG 586 (934)
Q Consensus 561 wv~~~~~pi~de~G~v~~~vgi~rDI 586 (934)
|+.....++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999998888999999999986
No 480
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.79 E-value=1.3e-07 Score=80.54 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=86.8
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (934)
++++++++|. +|.++++|+++++++|++.++++|+.+..+.++.........+...+..+.....++.....+|...
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3578899998 6779999999999999999999999987677776666666666666666666777888888889999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecc
Q 002342 278 WNLLTIAPIKDDEGKVLKFIGMQVEV 303 (934)
Q Consensus 278 wv~~s~~pi~d~~G~v~~~v~~~~DI 303 (934)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 481
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=7.1e-09 Score=109.15 Aligned_cols=154 Identities=24% Similarity=0.315 Sum_probs=114.9
Q ss_pred HHHHhCCCCCccceeEEEEeCC-----eEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHC--C
Q 002342 721 EILDMLDHPFVPALYASFQTKT-----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ--G 791 (934)
Q Consensus 721 ~il~~l~hp~Iv~l~~~~~~~~-----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~--g 791 (934)
.-|-++.|.|||+++.|+.+.. ...++.|||..|+|..+|++- ..+.+.....++|+.||+.||.|||+. -
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455668999999999987543 478999999999999999753 234588888999999999999999998 5
Q ss_pred CeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc
Q 002342 792 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA 871 (934)
Q Consensus 792 iiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~ 871 (934)
|+|+++..+-|++..+|-+|+.--.-... .+... .+. -..+....|-++|.+||.=.
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~~--~~~------------------~~Ek~~~~~~~g~~a~~sg~ 255 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSVN--STR------------------EAEKSVNTSLPGFSAPESGT 255 (458)
T ss_pred cccCCcchhheeecCCceEEecccCcccc---chhhh--hhh------------------HhhhhccccCCccccCCcCc
Confidence 99999999999999888887643221100 00000 000 01112234678899999876
Q ss_pred CCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 872 GAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 872 ~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
....+.++|||+||.+.++|..+..-
T Consensus 256 ~tn~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 256 TTNTTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred ccccccchhhhhhhHHHHHHHHheec
Confidence 66777799999999999999987653
No 482
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.76 E-value=3e-08 Score=110.56 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=88.7
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEE
Q 002342 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (934)
Q Consensus 185 ~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (934)
....+.|+.++++++++++++|. +|.|+++|++|++++||+.++++|+++..+..+ . .+...+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~---~----~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH---P----EFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC---H----HHHHHHHhccc-C
Confidence 45668899999999999999998 777999999999999999999999997755443 1 23333433332 2
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 265 ~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
.......++|..+|+.+++.|+.+. . ++++++|||++++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~--~---~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEE--Q---KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCC--c---eEEEEeCchHHHHHHHHHH
Confidence 2344556889999999999998754 2 6788999999998877654
No 483
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.74 E-value=3.4e-08 Score=111.48 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=87.8
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.++.+++++++|++++|.+|+ |+++|+++++++||+.++++|+++..+.+.... ....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFSL--NIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcchh--hHHHHHHHHHcCCcccccceE
Confidence 489999999999999999888 999999999999999999999998887765322 223444556665555444445
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
..++|..+|+.++..|+. . .+++..++|||++++.+
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~ 118 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLS 118 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHH
Confidence 567999999999999986 2 24667789999988753
No 484
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.72 E-value=1.1e-07 Score=107.33 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=92.2
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (934)
...++.+++++++|++++|. +|+|+++|++|++++||+.++++|+++..+.+... .....+...+..+..+....
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 35678999999999999998 77799999999999999999999999886655432 22344556666666555444
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 268 ~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
..+.+||..+|+.++.+|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 45578999999999999986 2 346778999999998877654
No 485
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.71 E-value=1.9e-07 Score=113.21 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=105.0
Q ss_pred ccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC
Q 002342 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (934)
Q Consensus 182 ~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (934)
..+...+..++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 45667778899999999999999998 77799999999999999999999999887766543 23344555555554
Q ss_pred c-EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhc
Q 002342 262 S-YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 262 ~-~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
. ...++...+++|..+ +.++..|+.+.+|.+.+++++++|||++++++++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 4 334566677888876 8999999999999999999999999999999988763
No 486
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.69 E-value=1.4e-07 Score=105.30 Aligned_cols=134 Identities=17% Similarity=0.253 Sum_probs=107.4
Q ss_pred cEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----CCeEEEEEEccCC-CCc
Q 002342 682 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDYCPG-GEL 756 (934)
Q Consensus 682 ~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~~~~~lV~E~~~g-gsL 756 (934)
..+.|++...-+|..|++|+++.... ........-+++++++.|+|||+|.++|.. +..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~---~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRD---QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccc---cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 35889999999999999999953321 111223346788999999999999999973 4578999999975 577
Q ss_pred hhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 757 FLLLDRQ-------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 757 ~~~l~~~-------------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+++.-.. .+...++..+|.|+.|+..||.++|+.|+..+-|.|.+||++.+.+++|...|..
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccce
Confidence 7664321 1235788999999999999999999999999999999999998888988887765
No 487
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.69 E-value=1.3e-07 Score=114.59 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=96.4
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc-EEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLI 551 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~-~~~e~~ 551 (934)
.++.++++++++++++|.+|. |+++|+++++++||+.++++|+++..+.++.. .....+...+..+.. ...+..
T Consensus 263 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 337 (607)
T PRK11360 263 LNELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEIS 337 (607)
T ss_pred HHHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEE
Confidence 478899999999999999888 99999999999999999999999888876542 233444455555443 345667
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccC
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~ 596 (934)
..+++|..+ +.++..|+++.+|++.+++++++|||++|+++.+.
T Consensus 338 ~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l 381 (607)
T PRK11360 338 FPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRV 381 (607)
T ss_pred EEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHH
Confidence 778888876 88999999999999999999999999999864433
No 488
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.63 E-value=1.7e-07 Score=86.56 Aligned_cols=106 Identities=15% Similarity=0.255 Sum_probs=73.5
Q ss_pred HHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (934)
Q Consensus 191 ~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (934)
++.++++++.+++++|. +++|.|+|+++.++++.. +..+|+++..+.++.........+ +.+..+.....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46899999999999999 777999999999999976 456899999887664333333444 445555543333332
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 271 ~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
..+| .|+.+++.|++|.+|...|++.++.|||
T Consensus 75 ~~~~--~~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGG--RWYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETT--EEEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCC--EEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 3555 3778899999999999999999999998
No 489
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.61 E-value=2.8e-07 Score=96.32 Aligned_cols=136 Identities=22% Similarity=0.203 Sum_probs=102.8
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc------C-------------hHHHHHHHHHHHHHHhCCCC--
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------N-------------RNKVHRACAEREILDMLDHP-- 729 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~------~-------------~~~~~~~~~E~~il~~l~hp-- 729 (934)
+.+...||-|.-|.||.+.+. .|.++|||.-+.+... . ........+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 455678999999999999985 6889999975422110 0 01123456799999999655
Q ss_pred CccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002342 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (934)
Q Consensus 730 ~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~ 809 (934)
.|+..+++ +..++||||++|-.|...- ++......++..|++-+.-+-..|+||+|+.+=||+++.+|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 77777654 5668999999988776553 133455666777777777777899999999999999999999
Q ss_pred EEEEecccC
Q 002342 810 VSLTDFDLS 818 (934)
Q Consensus 810 vkl~DFG~a 818 (934)
+.++||--+
T Consensus 241 ~~vIDwPQ~ 249 (304)
T COG0478 241 IVVIDWPQA 249 (304)
T ss_pred EEEEeCccc
Confidence 999999866
No 490
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.59 E-value=2e-07 Score=103.93 Aligned_cols=104 Identities=11% Similarity=0.008 Sum_probs=81.6
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
+|+.++++++++|+++|.+|. |+++|++|++++||+.++++|+++..+.+++ .. ...+..+.. ......
T Consensus 7 ~l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~~----~~~l~~~~~-~~~~~~ 75 (333)
T TIGR02966 7 RFRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP---EF----VEYLAAGRF-SEPLEL 75 (333)
T ss_pred HHHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH---HH----HHHHHhccc-CCCeEe
Confidence 489999999999999999888 9999999999999999999999977776542 22 222322222 223445
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
..++|..+|+.+...|+.+.. ++++++|||++++.
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~ 110 (333)
T TIGR02966 76 PSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRL 110 (333)
T ss_pred ecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHH
Confidence 568899999999999987542 67888999998873
No 491
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.58 E-value=4.1e-07 Score=101.29 Aligned_cols=119 Identities=27% Similarity=0.600 Sum_probs=103.5
Q ss_pred HHHHHHhcc---ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCC--CcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 474 LATTLERIE---KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 474 l~~i~e~~~---d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
++.++.... ..+++.+++-.|++|+|+|+.||++.||.+.|++.++ +.+++++-.+....+.+++.+...+.-++
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 666665443 4555566666689999999999999999999999988 55667777777788888999998888899
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
|+.++.|+.+..|..+.+.||+++...++.|+..++|||..|++
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 99999999999999999999999999999999999999999996
No 492
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.55 E-value=5.6e-07 Score=92.42 Aligned_cols=141 Identities=20% Similarity=0.243 Sum_probs=94.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhCCC---CCccceeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDH---PFVPALYA 736 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~------~~~E~~il~~l~h---p~Iv~l~~ 736 (934)
+...+|.+.+.+-......|.+..- +|..|++|............... ..+.+..+..+.. -....++-
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 3457899999999988888888876 77899999877542211111111 1233343333322 22222222
Q ss_pred EEE-----eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 737 SFQ-----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 737 ~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
+.. .....+|+|||++|..|.++.. +++ .+...+..+|.-||+.|+.|+|.+|+|++++. +.++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~ 174 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIR 174 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEE
Confidence 222 2245679999999998877642 232 24466778899999999999999999999995 5599
Q ss_pred EEecccCc
Q 002342 812 LTDFDLSC 819 (934)
Q Consensus 812 l~DFG~a~ 819 (934)
++||+..+
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998763
No 493
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.55 E-value=9.5e-07 Score=96.41 Aligned_cols=209 Identities=20% Similarity=0.290 Sum_probs=136.2
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccc----eeEE--EEeC-CeE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPA----LYAS--FQTK-THV 744 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~----l~~~--~~~~-~~~ 744 (934)
..+.||+|+-+.+|-+.... -.+-|++++.......+ -...|... .||-+.. .... ..+. ...
T Consensus 15 ~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~~aq------k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAAQAQ------KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecchhh---chhheeecCCCchHHHH------HHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 44679999999999765433 35678887642211111 12223333 5664322 1111 1122 236
Q ss_pred EEEEEccCCCCc-hhhh----ccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 745 CLITDYCPGGEL-FLLL----DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL-~~~l----~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
.++|..+.|..= ..++ .++....+.++.+...++.++.+.+-||..|.+-+|+.++|+|+++++.|.|.|-..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 788888866421 1111 23455668899999999999999999999999999999999999999999999855321
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG 894 (934)
.- .+......-+|...|.+||... +..-+...|.|.||+++|+|+.|
T Consensus 166 i~----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g 217 (637)
T COG4248 166 IN----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG 217 (637)
T ss_pred ec----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence 10 1112223457999999999875 23345578999999999999985
Q ss_pred -CCCCCCCCH----HHHH-HHHHcCCCCCC
Q 002342 895 -YTPFRGKTR----QKTF-ANILHKDLKFP 918 (934)
Q Consensus 895 -~~Pf~~~~~----~~~~-~~i~~~~~~~p 918 (934)
+.||.|--. ..-+ ..|-+|.|.+-
T Consensus 218 grHPysGI~~~~~ap~p~E~~Ia~g~f~ya 247 (637)
T COG4248 218 GRHPYSGIPLISDAPNPLETDIAHGRFAYA 247 (637)
T ss_pred CCCCCCcccccCCCCCcchhhhhcceeeec
Confidence 999986221 1122 25666666543
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=9.8e-07 Score=91.89 Aligned_cols=105 Identities=28% Similarity=0.300 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhCCCC--CccceeEEEEeC----CeEEEEEEccCCC-CchhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 002342 714 HRACAEREILDMLDHP--FVPALYASFQTK----THVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 786 (934)
Q Consensus 714 ~~~~~E~~il~~l~hp--~Iv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~y 786 (934)
....+|...+..|..- .++..+.+.... ...+||+|++++. +|.+++..... .+......++.+++..+.-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 4567788887777533 345666666542 2458999999874 79988876322 6677788899999999999
Q ss_pred HHHCCCeecCCCCCCEEEecCC---cEEEEecccCcc
Q 002342 787 LHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (934)
Q Consensus 787 LH~~giiHrDLKp~NILl~~~~---~vkl~DFG~a~~ 820 (934)
||.+||+|+|++|.|||++.++ .+.++||+.+..
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999999999999887 899999998754
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.53 E-value=1e-06 Score=90.17 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=101.7
Q ss_pred ccCCcEEEEEEEEecCCeEEEEEEeecccc---cChHHHHHHHHHHHHHHhCCCCC--ccceeEEEE---e--CCeEEEE
Q 002342 678 GSGDTGSVHLVELCGSGQYFAMKAMDKGVM---LNRNKVHRACAEREILDMLDHPF--VPALYASFQ---T--KTHVCLI 747 (934)
Q Consensus 678 G~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~---~~~~~~~~~~~E~~il~~l~hp~--Iv~l~~~~~---~--~~~~~lV 747 (934)
|+||.|.|+.... .|+.|=+|.-..... .-+.....+.+|...|..|..-+ ++++. ++. . .-..+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 7889999999876 344677886542211 11334567889999998885332 44544 332 1 1246799
Q ss_pred EEccCC-CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEEecccCcc
Q 002342 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (934)
Q Consensus 748 ~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~--vkl~DFG~a~~ 820 (934)
+|-++| .+|.+++....-...+......++.+++..+.-||+.|+.|+|+-+.||+++.+|. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997743 68888876543334677778899999999999999999999999999999986677 99999997743
No 496
>PF12860 PAS_7: PAS fold
Probab=98.53 E-value=2.9e-07 Score=86.30 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=74.0
Q ss_pred HHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhH-cCCCCCCCC---------CCCCChHHHHHHHHHHhcCCcEE
Q 002342 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (934)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl-lG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 264 (934)
++++++||++.|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.............+.......
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 7779999999999999999998 788754221 22222233333333334433333
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHH
Q 002342 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (934)
Q Consensus 265 ~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (934)
.+ ....||. |++++..|+ ++| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3467785 678888888 456 56789999999999874
No 497
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.53 E-value=3.2e-07 Score=84.62 Aligned_cols=106 Identities=20% Similarity=0.318 Sum_probs=74.1
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
++.++++++.+++++|.+++ |.++|+++.++|+.. ...+|+++..+.++...+...+.+. .+..+.....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~~i~-~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKKIIE-QVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHHHHH-HHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHHHHH-HHHcCCCceEEEEe-
Confidence 46789999999999999888 999999999999976 5668999988877644444444444 44455443333332
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
..+|. |+.++..|+++.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35555 677899999999999999999999998
No 498
>PF12860 PAS_7: PAS fold
Probab=98.52 E-value=3.3e-07 Score=85.87 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=74.0
Q ss_pred HHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhh-cCCCCcccC---------CCCCCHHHHHHHHHHHhcCCcEE
Q 002342 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 547 (934)
Q Consensus 478 ~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEl-iG~~~~~l~---------~~~~~~~~~~~i~~~l~~~~~~~ 547 (934)
++++++||++.|.+|+ ++++|++|.+++|++.+.+ .|.++..++ .+.....................
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4678999999999888 9999999999999999998 788855443 22222333333333334444333
Q ss_pred EEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 548 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 548 ~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
.+ ....||. |+.++..|+ .+| +++.++.|||++|++|
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhc
Confidence 33 3457787 677888888 456 5778899999999864
No 499
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.52 E-value=3.2e-07 Score=102.09 Aligned_cols=121 Identities=31% Similarity=0.631 Sum_probs=103.0
Q ss_pred HHHHHHHhcc--C-cEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCC--CCCCCCCChHHHHHHHHHHhcCCcEE
Q 002342 190 IVKDALSTFQ--Q-TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYC 264 (934)
Q Consensus 190 ~~~~ile~~~--d-~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (934)
.++.|+.-+. | .+++-+..-.|..|+|+|..||++.||.+.|+.-+++. +++.+..+....+.++++++..+.-+
T Consensus 15 FLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~q 94 (971)
T KOG0501|consen 15 FLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQ 94 (971)
T ss_pred HHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcc
Confidence 4444544433 3 44555555558889999999999999999999999865 78888888899999999999998888
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHH
Q 002342 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (934)
Q Consensus 265 ~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (934)
.|+..++|+-..+|+.+.+.||+++...++-|+++++|||..|+--
T Consensus 95 fEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPi 140 (971)
T KOG0501|consen 95 FEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPI 140 (971)
T ss_pred eeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCC
Confidence 9999999999999999999999999999999999999999988743
No 500
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.51 E-value=5.2e-06 Score=101.54 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=78.3
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
+..+++.+++||+++|.+|+ |+++|+++++++|++.++++|+++..+++.. . .+...+..+..........
T Consensus 205 ~~~il~~~~~gVl~vD~~G~---I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~--~----~l~~vl~~~~~~~~~~~~l 275 (638)
T PRK11388 205 LNALLESMDDGVIAWDEQGN---LQFLNAQAARLLRLDATASQGRAITELLTLP--A----VLQQAIKQAHPLKHVEVTF 275 (638)
T ss_pred HHHHHhccCCcEEEECCCCe---EehhhHHHHHHhCcCHHHHCCCcHHHHhccc--h----HHHHHHhcCCceeeEEEEE
Confidence 56789999999999999888 9999999999999999999999977776421 1 2334455555443322223
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
..+|..+++.+++.|+.+..|. +++.+.+|++..++
T Consensus 276 ~~~g~~~~~~v~~~Pi~~~~g~--~~v~~l~~~~~~~~ 311 (638)
T PRK11388 276 ESQGQFIDAVITLKPIIEGQGT--SFILLLHPVEQMRQ 311 (638)
T ss_pred ecCCceEEEEEEEEeecccCce--EEEEEehhhHHHHH
Confidence 4567777889999999755453 35666788887543
Done!