Query 002342
Match_columns 934
No_of_seqs 650 out of 4536
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 22:25:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.8E-51 1.3E-55 447.3 17.9 234 668-930 31-264 (311)
2 4b9d_A Serine/threonine-protei 100.0 8.3E-50 2.9E-54 443.8 20.9 234 668-930 23-256 (350)
3 3hyh_A Carbon catabolite-derep 100.0 1.3E-48 4.5E-53 421.3 21.2 230 668-930 12-242 (275)
4 4fih_A Serine/threonine-protei 100.0 1.7E-48 6E-53 432.5 18.9 229 669-930 74-303 (346)
5 3ubd_A Ribosomal protein S6 ki 100.0 5.3E-49 1.8E-53 430.2 14.5 233 666-930 21-256 (304)
6 4fie_A Serine/threonine-protei 100.0 1.8E-47 6.2E-52 434.6 21.3 229 669-930 151-380 (423)
7 4g3f_A NF-kappa-beta-inducing 100.0 2.2E-47 7.6E-52 422.4 16.0 220 667-918 56-276 (336)
8 3fpq_A Serine/threonine-protei 100.0 6.8E-46 2.3E-50 403.6 21.4 227 671-930 28-262 (290)
9 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-45 6.4E-50 402.8 20.7 228 665-920 9-254 (299)
10 3omv_A RAF proto-oncogene seri 100.0 1.1E-44 3.9E-49 396.9 24.0 226 663-919 30-258 (307)
11 4aoj_A High affinity nerve gro 100.0 2.5E-44 8.5E-49 399.3 24.8 228 665-920 37-284 (329)
12 4gt4_A Tyrosine-protein kinase 100.0 2.1E-44 7.2E-49 396.1 22.3 229 665-920 22-271 (308)
13 3v5w_A G-protein coupled recep 100.0 8.4E-45 2.9E-49 430.3 19.9 236 662-930 182-424 (689)
14 4b99_A Mitogen-activated prote 100.0 1.4E-43 4.9E-48 403.1 23.1 220 668-914 53-279 (398)
15 4g31_A Eukaryotic translation 100.0 4.5E-43 1.5E-47 384.4 21.2 225 669-913 5-243 (299)
16 4ase_A Vascular endothelial gr 100.0 1.7E-43 5.7E-48 395.9 16.9 230 664-920 59-312 (353)
17 3uto_A Twitchin; kinase, muscl 100.0 7.8E-43 2.7E-47 416.0 21.8 231 668-930 156-390 (573)
18 4f9c_A Cell division cycle 7-r 100.0 6.7E-42 2.3E-46 385.2 22.8 234 668-911 20-261 (361)
19 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.6E-41 1.6E-45 378.4 18.6 229 664-921 18-247 (353)
20 1o6l_A RAC-beta serine/threoni 100.0 1.4E-40 4.8E-45 372.0 20.7 233 666-929 2-234 (337)
21 1xjd_A Protein kinase C, theta 100.0 4.6E-40 1.6E-44 368.9 20.7 234 665-929 13-247 (345)
22 1fot_A TPK1 delta, CAMP-depend 100.0 4.5E-40 1.5E-44 365.1 19.8 223 666-920 3-225 (318)
23 3v8s_A RHO-associated protein 100.0 1.2E-40 4.2E-45 381.7 15.6 237 665-930 65-307 (410)
24 2i0e_A Protein kinase C-beta I 100.0 4.4E-40 1.5E-44 370.3 19.6 234 665-929 16-250 (353)
25 4dc2_A Protein kinase C IOTA t 100.0 7.8E-40 2.7E-44 373.2 21.2 234 665-929 48-291 (396)
26 3hmm_A TGF-beta receptor type- 100.0 2.1E-40 7.1E-45 364.7 15.8 199 669-899 3-219 (303)
27 3a8x_A Protein kinase C IOTA t 100.0 2.4E-39 8.2E-44 363.4 23.7 226 666-920 6-241 (345)
28 3fe3_A MAP/microtubule affinit 100.0 2.3E-39 7.8E-44 361.0 23.2 225 666-921 12-237 (328)
29 2r5t_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 371.7 18.8 234 665-929 34-268 (373)
30 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-39 4E-44 366.6 19.5 223 666-920 38-260 (350)
31 4aw2_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44 378.5 17.0 240 664-930 69-316 (437)
32 2vd5_A DMPK protein; serine/th 100.0 1.2E-39 4.2E-44 373.7 15.9 240 664-930 56-305 (412)
33 4fr4_A YANK1, serine/threonine 100.0 4.3E-39 1.5E-43 365.7 20.0 230 661-920 7-242 (384)
34 3zgw_A Maternal embryonic leuc 100.0 5.3E-39 1.8E-43 360.5 20.4 224 668-921 9-233 (347)
35 2yab_A Death-associated protei 100.0 1.2E-38 4.2E-43 359.6 21.3 233 668-930 11-252 (361)
36 3a62_A Ribosomal protein S6 ki 100.0 3.4E-38 1.2E-42 351.4 21.5 227 665-920 13-243 (327)
37 2bdw_A Hypothetical protein K1 100.0 6.4E-38 2.2E-42 354.2 23.1 231 668-929 28-263 (362)
38 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.1E-38 1E-42 372.7 21.1 235 666-929 182-422 (543)
39 3soa_A Calcium/calmodulin-depe 100.0 5.5E-38 1.9E-42 363.7 22.9 233 668-930 10-247 (444)
40 4ejn_A RAC-alpha serine/threon 100.0 1.9E-38 6.4E-43 369.0 18.9 229 664-921 143-372 (446)
41 3pfq_A PKC-B, PKC-beta, protei 100.0 2.5E-38 8.6E-43 385.0 19.9 235 665-930 337-572 (674)
42 4eqm_A Protein kinase; transfe 100.0 1.5E-37 5.2E-42 340.8 23.6 221 667-915 9-229 (294)
43 3fxz_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 343.0 21.2 212 668-912 19-230 (297)
44 2acx_A G protein-coupled recep 100.0 5.7E-38 2E-42 371.3 19.9 236 665-930 180-419 (576)
45 1tki_A Titin; serine kinase, m 100.0 2.4E-37 8.2E-42 343.7 23.7 219 668-919 4-224 (321)
46 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-37 4.9E-42 341.3 21.5 236 664-929 8-271 (298)
47 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-38 7.6E-43 353.9 12.5 222 668-920 8-230 (336)
48 2y0a_A Death-associated protei 100.0 7.4E-37 2.5E-41 340.5 24.5 222 668-919 10-238 (326)
49 2y94_A 5'-AMP-activated protei 100.0 1.6E-37 5.5E-42 362.2 19.6 227 665-921 12-239 (476)
50 3ork_A Serine/threonine protei 100.0 2.7E-37 9.4E-42 341.4 18.3 225 668-918 11-239 (311)
51 3uc3_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 345.3 22.1 231 666-930 17-254 (361)
52 3tki_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 342.6 19.0 223 668-919 6-230 (323)
53 3c0i_A Peripheral plasma membr 100.0 7.7E-37 2.6E-41 344.0 21.6 223 668-918 23-252 (351)
54 3fdn_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 331.9 21.0 226 665-921 5-230 (279)
55 2eue_A Carbon catabolite derep 100.0 1.6E-36 5.6E-41 328.7 22.8 224 667-921 11-235 (275)
56 3p86_A Serine/threonine-protei 100.0 9.4E-37 3.2E-41 337.1 20.9 222 663-914 31-255 (309)
57 1kob_A Twitchin; kinase, intra 100.0 2.4E-36 8.2E-41 344.0 24.9 221 668-920 50-272 (387)
58 3kul_A Ephrin type-A receptor 100.0 6.9E-37 2.4E-41 340.6 19.2 223 664-913 44-270 (325)
59 3llt_A Serine/threonine kinase 100.0 2.8E-36 9.7E-41 340.2 24.1 218 666-918 32-279 (360)
60 1nxk_A MAP kinase-activated pr 100.0 9.3E-37 3.2E-41 349.4 20.2 227 668-930 60-301 (400)
61 2qr7_A Ribosomal protein S6 ki 100.0 3.4E-37 1.2E-41 345.5 15.5 227 668-930 21-257 (342)
62 3gni_B Strad alpha; kinase fol 100.0 2E-36 6.8E-41 345.4 22.1 228 667-915 23-254 (389)
63 2vgo_A Serine/threonine-protei 100.0 2.5E-36 8.4E-41 329.0 21.8 224 666-920 11-234 (284)
64 2psq_A Fibroblast growth facto 100.0 4.6E-36 1.6E-40 340.1 24.5 223 665-914 77-322 (370)
65 2rku_A Serine/threonine-protei 100.0 9.4E-36 3.2E-40 326.0 25.2 225 667-920 13-237 (294)
66 3nyv_A Calmodulin-domain prote 100.0 6.2E-37 2.1E-41 360.0 16.7 233 667-930 24-261 (484)
67 3oz6_A Mitogen-activated prote 100.0 3.8E-36 1.3E-40 343.0 22.7 239 668-918 8-250 (388)
68 2owb_A Serine/threonine-protei 100.0 7.4E-36 2.5E-40 333.7 24.5 225 667-920 39-263 (335)
69 3kk8_A Calcium/calmodulin depe 100.0 1.1E-35 3.9E-40 323.4 25.4 222 668-920 5-229 (284)
70 3ttj_A Mitogen-activated prote 100.0 4.3E-36 1.5E-40 350.2 23.0 211 668-912 61-277 (464)
71 2x4f_A Myosin light chain kina 100.0 3.6E-36 1.2E-40 341.2 21.7 218 670-919 88-309 (373)
72 1u5q_A Serine/threonine protei 100.0 6.6E-36 2.3E-40 335.9 23.2 215 669-916 54-271 (348)
73 3o0g_A Cell division protein k 100.0 6.4E-36 2.2E-40 327.2 22.4 214 669-912 2-217 (292)
74 2w4o_A Calcium/calmodulin-depe 100.0 3.3E-36 1.1E-40 338.5 20.4 218 667-919 51-272 (349)
75 2izr_A Casein kinase I isoform 100.0 4.1E-36 1.4E-40 334.9 20.7 224 666-916 6-238 (330)
76 2a2a_A Death-associated protei 100.0 8.8E-36 3E-40 330.9 23.0 222 668-919 11-239 (321)
77 2pmi_A Negative RE, cyclin-dep 100.0 4.4E-36 1.5E-40 332.8 20.3 215 668-912 4-223 (317)
78 3niz_A Rhodanese family protei 100.0 6.1E-36 2.1E-40 330.8 21.3 217 665-912 17-234 (311)
79 3mwu_A Calmodulin-domain prote 100.0 1.7E-36 5.9E-41 356.4 17.7 231 668-930 21-256 (486)
80 3g33_A Cell division protein k 100.0 6.8E-36 2.3E-40 329.6 21.3 218 666-912 6-233 (308)
81 3kn6_A Ribosomal protein S6 ki 100.0 5.9E-36 2E-40 333.1 20.9 216 669-919 8-237 (325)
82 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-35 4.5E-40 327.6 23.2 218 666-900 7-224 (310)
83 3f3z_A Calcium/calmodulin-depe 100.0 1.2E-35 4.2E-40 322.0 22.2 218 668-919 8-228 (277)
84 2c30_A Serine/threonine-protei 100.0 7.5E-36 2.6E-40 331.7 20.8 213 670-915 46-258 (321)
85 4hcu_A Tyrosine-protein kinase 100.0 7.3E-36 2.5E-40 322.6 19.6 219 664-914 5-224 (269)
86 1ob3_A PFPK5, cell division co 100.0 6.8E-36 2.3E-40 326.4 19.6 213 669-912 2-215 (288)
87 3lij_A Calcium/calmodulin depe 100.0 6.7E-36 2.3E-40 352.0 21.0 230 669-930 37-271 (494)
88 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-35 5.4E-40 349.8 24.1 232 668-930 35-281 (504)
89 3hko_A Calcium/calmodulin-depe 100.0 3.1E-36 1.1E-40 337.5 17.0 230 668-920 25-298 (345)
90 3rp9_A Mitogen-activated prote 100.0 1.3E-35 4.5E-40 346.2 22.8 231 668-902 52-299 (458)
91 3vhe_A Vascular endothelial gr 100.0 2.9E-36 1E-40 339.7 16.6 223 663-912 16-310 (359)
92 3cok_A Serine/threonine-protei 100.0 4E-36 1.4E-40 326.1 16.9 225 668-920 10-234 (278)
93 3l9p_A Anaplastic lymphoma kin 100.0 7.3E-36 2.5E-40 338.1 19.4 224 665-915 67-304 (367)
94 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.2E-36 2.1E-40 338.3 18.4 206 664-900 60-287 (365)
95 1luf_A Muscle-specific tyrosin 100.0 2E-35 6.9E-40 330.5 22.2 224 665-915 43-294 (343)
96 4agu_A Cyclin-dependent kinase 100.0 2.5E-35 8.5E-40 325.2 22.6 215 668-912 2-217 (311)
97 2h6d_A 5'-AMP-activated protei 100.0 1.8E-35 6.1E-40 320.4 20.8 226 665-920 7-233 (276)
98 2h34_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 326.8 20.8 217 667-911 32-248 (309)
99 2jam_A Calcium/calmodulin-depe 100.0 2.2E-35 7.4E-40 324.9 21.4 219 668-920 8-229 (304)
100 3lm5_A Serine/threonine-protei 100.0 3.4E-35 1.2E-39 327.2 23.1 224 668-920 27-255 (327)
101 4euu_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40 327.8 20.8 218 667-914 7-243 (319)
102 1rjb_A FL cytokine receptor; k 100.0 8.2E-36 2.8E-40 334.1 18.1 230 663-919 39-296 (344)
103 3tt0_A Basic fibroblast growth 100.0 6.8E-35 2.3E-39 332.0 25.8 224 664-914 64-310 (382)
104 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-35 3.7E-40 328.3 18.6 226 662-914 16-269 (314)
105 3kfa_A Tyrosine-protein kinase 100.0 1.9E-35 6.6E-40 322.3 19.9 221 663-913 7-228 (288)
106 3dtc_A Mitogen-activated prote 100.0 2.1E-35 7.1E-40 319.0 19.8 227 666-926 4-242 (271)
107 3bhy_A Death-associated protei 100.0 4.4E-35 1.5E-39 318.5 22.4 221 668-918 4-231 (283)
108 2qol_A Ephrin receptor; recept 100.0 1.2E-35 4.2E-40 337.0 18.4 225 662-913 38-266 (373)
109 1t46_A HOMO sapiens V-KIT hard 100.0 1.6E-35 5.3E-40 326.9 18.7 228 664-918 18-268 (313)
110 3lb7_A RAF proto-oncogene seri 100.0 6.7E-35 2.3E-39 321.9 23.4 226 662-918 29-257 (307)
111 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-35 6.2E-40 329.6 18.8 216 666-912 31-252 (329)
112 2wqm_A Serine/threonine-protei 100.0 5.2E-35 1.8E-39 322.7 22.3 222 667-915 30-255 (310)
113 2xrw_A Mitogen-activated prote 100.0 6E-35 2.1E-39 331.1 23.3 212 668-913 24-241 (371)
114 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-35 3.8E-40 337.9 17.2 229 663-919 108-338 (377)
115 3kmu_A ILK, integrin-linked ki 100.0 2.1E-35 7.3E-40 318.4 18.5 219 665-918 6-231 (271)
116 3is5_A Calcium-dependent prote 100.0 2.5E-35 8.5E-40 321.5 19.1 220 669-919 22-246 (285)
117 1cm8_A Phosphorylated MAP kina 100.0 2.3E-35 8E-40 333.9 19.6 210 668-912 24-240 (367)
118 2ac3_A MAP kinase-interacting 100.0 3.9E-35 1.3E-39 324.4 21.0 227 668-919 11-262 (316)
119 3mtl_A Cell division protein k 100.0 1E-35 3.5E-40 331.0 15.9 213 669-912 2-215 (324)
120 2y7j_A Phosphorylase B kinase 100.0 7.4E-35 2.5E-39 329.6 23.1 222 668-919 93-326 (365)
121 3kvw_A DYRK2, dual specificity 100.0 6.5E-35 2.2E-39 337.2 23.1 211 667-912 95-313 (429)
122 3gen_A Tyrosine-protein kinase 100.0 8.7E-35 3E-39 316.4 22.5 221 663-915 18-239 (283)
123 4aaa_A Cyclin-dependent kinase 100.0 7.9E-35 2.7E-39 324.6 22.7 216 667-912 23-239 (331)
124 3dbq_A Dual specificity protei 100.0 5.9E-35 2E-39 327.4 21.7 219 666-915 6-238 (343)
125 4fvq_A Tyrosine-protein kinase 100.0 3.5E-35 1.2E-39 320.3 19.4 220 665-920 4-240 (289)
126 3kex_A Receptor tyrosine-prote 100.0 2.2E-35 7.4E-40 328.4 17.8 222 664-914 8-234 (325)
127 2x7f_A TRAF2 and NCK-interacti 100.0 4.7E-35 1.6E-39 325.3 20.5 218 667-915 22-251 (326)
128 1k9a_A Carboxyl-terminal SRC k 100.0 7.5E-35 2.6E-39 338.9 23.1 217 661-914 185-403 (450)
129 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.1E-35 1.7E-39 315.6 20.1 221 665-917 4-225 (268)
130 1mp8_A Focal adhesion kinase 1 100.0 3.6E-35 1.2E-39 319.4 18.7 221 664-914 10-234 (281)
131 2zmd_A Dual specificity protei 100.0 5.5E-35 1.9E-39 333.6 21.2 222 666-918 53-288 (390)
132 3mi9_A Cell division protein k 100.0 7.5E-35 2.6E-39 327.5 21.8 222 668-915 16-246 (351)
133 2fst_X Mitogen-activated prote 100.0 5.4E-35 1.8E-39 330.8 20.7 210 668-912 28-244 (367)
134 2wtk_C Serine/threonine-protei 100.0 7.7E-35 2.6E-39 320.2 21.3 227 668-920 4-235 (305)
135 3poz_A Epidermal growth factor 100.0 2.7E-35 9.1E-40 328.0 17.7 221 665-914 11-236 (327)
136 1vzo_A Ribosomal protein S6 ki 100.0 3.3E-35 1.1E-39 331.2 18.7 227 666-920 51-288 (355)
137 1phk_A Phosphorylase kinase; g 100.0 1.9E-34 6.6E-39 316.0 24.2 224 667-920 15-251 (298)
138 2yex_A Serine/threonine-protei 100.0 4.7E-35 1.6E-39 317.0 19.1 222 668-918 6-229 (276)
139 3qup_A Tyrosine-protein kinase 100.0 2.8E-35 9.5E-40 326.8 17.7 223 666-914 20-256 (323)
140 1qcf_A Haematopoetic cell kina 100.0 3.5E-35 1.2E-39 342.1 19.2 220 663-914 182-402 (454)
141 3ugc_A Tyrosine-protein kinase 100.0 3.5E-35 1.2E-39 321.7 17.9 209 664-900 5-219 (295)
142 4f0f_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39 317.9 19.9 217 666-915 16-247 (287)
143 1opk_A P150, C-ABL, proto-onco 100.0 5E-35 1.7E-39 344.3 19.9 221 663-913 214-435 (495)
144 2i1m_A Macrophage colony-stimu 100.0 2.7E-35 9.2E-40 328.4 16.3 227 664-917 41-286 (333)
145 2r3i_A Cell division protein k 100.0 1E-34 3.4E-39 318.4 20.5 216 668-912 2-218 (299)
146 1t4h_A Serine/threonine-protei 100.0 1.3E-34 4.6E-39 316.2 21.2 216 666-914 23-246 (290)
147 1ua2_A CAK, cell division prot 100.0 6.8E-35 2.3E-39 327.4 19.3 216 668-912 9-227 (346)
148 1csn_A Casein kinase-1; phosph 100.0 1.1E-34 3.7E-39 317.8 20.5 221 666-913 7-236 (298)
149 2pvf_A Fibroblast growth facto 100.0 8.4E-35 2.9E-39 324.8 19.8 225 663-914 29-276 (334)
150 3qd2_B Eukaryotic translation 100.0 1.1E-34 3.7E-39 322.5 20.5 214 668-898 5-276 (332)
151 3eb0_A Putative uncharacterize 100.0 1.4E-34 4.9E-39 329.4 22.0 211 666-912 4-256 (383)
152 3i6u_A CDS1, serine/threonine- 100.0 7.3E-35 2.5E-39 335.8 19.7 220 668-918 134-365 (419)
153 2pml_X PFPK7, Ser/Thr protein 100.0 4.8E-35 1.6E-39 328.3 17.6 223 666-919 28-274 (348)
154 2yfx_A Tyrosine-protein kinase 100.0 7.8E-35 2.7E-39 324.0 19.1 226 663-915 24-263 (327)
155 3t9t_A Tyrosine-protein kinase 100.0 1.6E-34 5.4E-39 311.2 20.9 220 664-915 3-223 (267)
156 1mqb_A Ephrin type-A receptor 100.0 1.8E-34 6.3E-39 322.1 21.7 224 663-913 38-266 (333)
157 3op5_A Serine/threonine-protei 100.0 5.8E-35 2E-39 330.3 17.8 214 666-901 32-264 (364)
158 3lzb_A Epidermal growth factor 100.0 5.8E-35 2E-39 325.4 17.3 221 665-914 11-236 (327)
159 1p4o_A Insulin-like growth fac 100.0 1.1E-34 3.9E-39 321.6 19.6 227 662-915 18-258 (322)
160 1fvr_A Tyrosine-protein kinase 100.0 7.8E-35 2.7E-39 324.0 18.3 218 666-913 22-257 (327)
161 3dls_A PAS domain-containing s 100.0 3.4E-35 1.2E-39 328.3 15.4 203 668-900 23-232 (335)
162 3eqc_A Dual specificity mitoge 100.0 1.1E-34 3.7E-39 327.4 19.5 213 665-910 29-242 (360)
163 1u59_A Tyrosine-protein kinase 100.0 5.2E-34 1.8E-38 311.2 24.1 222 665-914 5-230 (287)
164 3n9x_A Phosphotransferase; mal 100.0 2.8E-34 9.6E-39 332.3 23.2 226 668-902 25-267 (432)
165 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-34 4.5E-39 320.0 19.6 202 668-901 56-258 (311)
166 1qpc_A LCK kinase; alpha beta 100.0 8.3E-35 2.9E-39 315.8 17.6 221 662-914 6-227 (279)
167 3a7i_A MST3 kinase, serine/thr 100.0 4.4E-34 1.5E-38 314.2 23.4 215 668-914 21-235 (303)
168 2qkw_B Protein kinase; three-h 100.0 1.8E-34 6.2E-39 320.2 20.5 208 667-903 37-246 (321)
169 3fme_A Dual specificity mitoge 100.0 1.4E-34 4.7E-39 315.6 19.1 220 665-914 3-230 (290)
170 2w5a_A Serine/threonine-protei 100.0 8.9E-35 3E-39 315.5 17.5 220 668-915 5-233 (279)
171 3qyz_A Mitogen-activated prote 100.0 3.1E-34 1.1E-38 324.3 22.7 215 668-912 26-246 (364)
172 2xir_A Vascular endothelial gr 100.0 5.8E-35 2E-39 322.8 15.9 223 664-913 22-267 (316)
173 4eut_A Serine/threonine-protei 100.0 8.2E-35 2.8E-39 333.0 17.4 219 667-915 7-244 (396)
174 1z57_A Dual specificity protei 100.0 3.7E-34 1.3E-38 319.0 21.9 212 667-913 12-249 (339)
175 3byv_A Rhoptry kinase; malaria 100.0 7.4E-36 2.5E-40 339.3 8.0 211 668-910 72-325 (377)
176 3og7_A AKAP9-BRAF fusion prote 100.0 3.7E-34 1.3E-38 312.8 21.2 223 662-915 17-243 (289)
177 1u46_A ACK-1, activated CDC42 100.0 7E-35 2.4E-39 318.1 15.4 237 665-927 14-254 (291)
178 1j1b_A Glycogen synthase kinas 100.0 1.4E-34 4.9E-39 333.5 18.7 209 668-912 53-271 (420)
179 1xbb_A Tyrosine-protein kinase 100.0 3.6E-34 1.2E-38 313.1 20.8 223 664-914 11-237 (291)
180 3soc_A Activin receptor type-2 100.0 8E-35 2.7E-39 323.4 15.4 205 663-901 18-241 (322)
181 4exu_A Mitogen-activated prote 100.0 4.9E-34 1.7E-38 323.6 22.2 209 668-912 41-256 (371)
182 3an0_A Dual specificity mitoge 100.0 2.5E-34 8.5E-39 321.7 19.1 220 663-913 45-273 (340)
183 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-34 4.6E-39 336.9 17.6 220 663-914 178-398 (452)
184 3nsz_A CK II alpha, casein kin 100.0 1.8E-33 6.3E-38 313.0 26.0 195 667-900 34-233 (330)
185 3com_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 316.7 19.7 214 667-913 27-240 (314)
186 3brb_A Proto-oncogene tyrosine 100.0 3.5E-34 1.2E-38 316.5 19.9 224 665-914 30-266 (313)
187 2j7t_A Serine/threonine-protei 100.0 2.4E-34 8.3E-39 315.8 18.4 217 668-915 18-239 (302)
188 1wak_A Serine/threonine-protei 100.0 4.1E-34 1.4E-38 326.2 20.5 200 668-902 36-297 (397)
189 1byg_A CSK, protein (C-termina 100.0 1.7E-34 5.9E-39 313.3 16.5 217 660-913 12-230 (278)
190 4e5w_A Tyrosine-protein kinase 100.0 2.7E-34 9.2E-39 315.4 18.0 207 666-899 18-230 (302)
191 2wei_A Calmodulin-domain prote 100.0 5.5E-34 1.9E-38 311.0 20.3 220 668-919 21-243 (287)
192 3cc6_A Protein tyrosine kinase 100.0 3.5E-34 1.2E-38 311.5 18.6 220 665-914 8-231 (281)
193 2ycf_A Serine/threonine-protei 100.0 3.2E-34 1.1E-38 318.4 18.6 219 669-918 10-240 (322)
194 2vwi_A Serine/threonine-protei 100.0 1.9E-34 6.6E-39 316.4 16.4 227 664-914 10-243 (303)
195 3lxl_A Tyrosine-protein kinase 100.0 2.5E-34 8.5E-39 319.9 17.1 212 663-902 17-234 (327)
196 1blx_A Cyclin-dependent kinase 100.0 8E-34 2.7E-38 315.2 20.9 215 668-912 10-233 (326)
197 3f66_A Hepatocyte growth facto 100.0 1.4E-33 4.8E-38 309.3 22.2 224 668-917 24-252 (298)
198 2i6l_A Mitogen-activated prote 100.0 2E-33 6.8E-38 310.6 23.5 215 668-913 10-240 (320)
199 3pls_A Macrophage-stimulating 100.0 1E-33 3.5E-38 310.0 20.9 220 669-914 21-245 (298)
200 3coi_A Mitogen-activated prote 100.0 1.3E-33 4.5E-38 317.6 22.0 209 668-912 23-238 (353)
201 2eu9_A Dual specificity protei 100.0 1.2E-33 4.1E-38 317.2 21.5 217 667-918 17-259 (355)
202 2jii_A Serine/threonine-protei 100.0 2.3E-34 7.9E-39 323.8 15.6 206 668-902 41-272 (352)
203 2vx3_A Dual specificity tyrosi 100.0 1.2E-33 4E-38 321.8 21.4 211 668-913 53-273 (382)
204 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-33 5.1E-38 316.8 22.0 221 668-911 10-236 (353)
205 2ozo_A Tyrosine-protein kinase 100.0 1.7E-33 5.7E-38 339.4 23.8 226 666-919 332-562 (613)
206 1x8b_A WEE1HU, WEE1-like prote 100.0 7.9E-34 2.7E-38 308.6 18.7 213 668-915 10-245 (289)
207 2h8h_A Proto-oncogene tyrosine 100.0 3.2E-34 1.1E-38 340.6 16.9 220 663-914 261-481 (535)
208 3uzp_A CKI-delta, CKID, casein 100.0 1.9E-33 6.5E-38 307.6 20.9 223 668-917 8-237 (296)
209 4e7w_A Glycogen synthase kinas 100.0 1.5E-33 5.3E-38 322.1 20.8 208 668-912 39-256 (394)
210 3pg1_A Mitogen-activated prote 100.0 1.9E-33 6.4E-38 317.4 21.2 214 668-912 21-248 (362)
211 2v62_A Serine/threonine-protei 100.0 9.7E-34 3.3E-38 317.8 18.4 212 666-900 34-262 (345)
212 2a19_B Interferon-induced, dou 100.0 1E-33 3.6E-38 307.5 17.8 209 668-913 10-234 (284)
213 3fhr_A MAP kinase-activated pr 100.0 1.1E-33 3.8E-38 316.2 18.5 217 667-919 26-254 (336)
214 3uim_A Brassinosteroid insensi 100.0 4.1E-34 1.4E-38 317.9 14.9 206 665-899 26-236 (326)
215 4fl3_A Tyrosine-protein kinase 100.0 2.1E-33 7.2E-38 339.4 22.2 217 675-919 375-595 (635)
216 3ll6_A Cyclin G-associated kin 100.0 9.4E-34 3.2E-38 315.6 17.7 235 664-921 23-272 (337)
217 3lxp_A Non-receptor tyrosine-p 100.0 8.4E-34 2.9E-38 314.6 17.1 207 666-901 28-240 (318)
218 2buj_A Serine/threonine-protei 100.0 1.6E-34 5.4E-39 319.7 11.1 215 665-900 25-248 (317)
219 3e3p_A Protein kinase, putativ 100.0 2E-33 6.9E-38 316.6 20.2 213 667-912 21-246 (360)
220 1zy4_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 306.2 21.2 232 669-921 6-252 (303)
221 3q60_A ROP5B; pseudokinase, tr 100.0 3.4E-34 1.2E-38 324.9 13.8 203 669-903 62-298 (371)
222 3c1x_A Hepatocyte growth facto 100.0 1.1E-33 3.9E-38 320.7 17.7 221 669-915 89-314 (373)
223 2clq_A Mitogen-activated prote 100.0 2.5E-33 8.6E-38 306.5 19.6 208 666-903 19-230 (295)
224 4hgt_A Casein kinase I isoform 100.0 4.9E-33 1.7E-37 304.1 21.9 208 668-902 8-219 (296)
225 3q4u_A Activin receptor type-1 100.0 2.6E-33 8.8E-38 307.3 19.7 200 667-900 6-235 (301)
226 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.2E-34 1.8E-38 315.7 14.1 229 662-918 26-263 (319)
227 1q8y_A SR protein kinase; tran 100.0 2.2E-33 7.4E-38 317.8 19.1 205 663-902 13-239 (373)
228 3rgf_A Cyclin-dependent kinase 100.0 2E-33 6.8E-38 322.4 18.9 205 669-903 20-241 (405)
229 3sv0_A Casein kinase I-like; t 100.0 8.1E-33 2.8E-37 323.2 23.3 208 668-902 6-217 (483)
230 2eva_A TAK1 kinase - TAB1 chim 100.0 7.1E-33 2.4E-37 305.6 20.7 209 666-913 5-220 (307)
231 3cek_A Dual specificity protei 100.0 6.6E-33 2.3E-37 306.4 20.4 222 663-915 22-257 (313)
232 2nru_A Interleukin-1 receptor- 100.0 3.8E-33 1.3E-37 307.1 17.9 207 669-903 31-239 (307)
233 2dyl_A Dual specificity mitoge 100.0 6.7E-33 2.3E-37 306.5 19.4 221 664-915 20-247 (318)
234 3a99_A Proto-oncogene serine/t 100.0 3.4E-33 1.1E-37 310.1 16.1 205 666-901 40-252 (320)
235 2w1i_A JAK2; chromosomal rearr 100.0 4.5E-33 1.5E-37 309.7 16.9 209 664-900 36-250 (326)
236 3ewk_A Sensor protein; PAS dom 100.0 6E-31 2.1E-35 276.7 30.8 220 202-585 2-227 (227)
237 2j0j_A Focal adhesion kinase 1 100.0 3.4E-32 1.2E-36 330.0 23.4 225 665-919 386-615 (656)
238 3aln_A Dual specificity mitoge 100.0 2.6E-32 8.8E-37 303.6 20.3 209 663-902 16-233 (327)
239 2iwi_A Serine/threonine-protei 100.0 5.3E-33 1.8E-37 306.9 14.3 204 666-900 28-241 (312)
240 3g2f_A Bone morphogenetic prot 100.0 5.2E-33 1.8E-37 310.2 14.3 206 664-899 8-236 (336)
241 3mdy_A Bone morphogenetic prot 100.0 3.7E-32 1.3E-36 303.1 19.4 199 668-900 36-264 (337)
242 3uqc_A Probable conserved tran 100.0 6.2E-32 2.1E-36 295.0 20.0 185 662-904 24-208 (286)
243 2vuw_A Serine/threonine-protei 100.0 1.8E-33 6.3E-38 314.3 7.2 197 666-900 17-279 (336)
244 1b6c_B TGF-B superfamily recep 100.0 8.3E-32 2.8E-36 301.0 19.1 213 668-914 41-288 (342)
245 2rio_A Serine/threonine-protei 100.0 1.3E-31 4.4E-36 310.1 20.3 220 668-920 14-260 (434)
246 2pzi_A Probable serine/threoni 100.0 1.1E-31 3.6E-36 328.4 17.9 195 667-900 78-278 (681)
247 3qa8_A MGC80376 protein; kinas 100.0 4.5E-32 1.6E-36 324.0 13.5 207 668-904 13-229 (676)
248 3gxj_A TGF-beta receptor type- 100.0 1.7E-33 5.7E-38 308.9 0.9 199 669-901 3-231 (303)
249 3p23_A Serine/threonine-protei 100.0 2E-31 6.8E-36 308.0 17.5 207 666-905 21-237 (432)
250 3dzo_A Rhoptry kinase domain; 100.0 7.3E-32 2.5E-36 310.1 11.4 213 668-912 77-331 (413)
251 3m2w_A MAP kinase-activated pr 100.0 7.3E-31 2.5E-35 288.2 18.3 181 668-905 16-205 (299)
252 4azs_A Methyltransferase WBDD; 100.0 7.3E-30 2.5E-34 304.2 6.2 188 675-895 240-435 (569)
253 3en9_A Glycoprotease, O-sialog 99.9 3.9E-25 1.3E-29 261.9 8.5 194 672-899 339-539 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 6E-23 2E-27 223.2 11.7 135 669-818 90-239 (282)
255 4f3l_A Mclock, circadian locom 99.8 1E-19 3.6E-24 204.6 13.6 107 482-591 251-358 (361)
256 4f3l_B BMAL1B; BHLH, PAS, circ 99.8 4E-19 1.4E-23 201.4 14.6 108 481-591 277-386 (387)
257 2gj3_A Nitrogen fixation regul 99.8 4.7E-18 1.6E-22 158.6 15.6 119 186-307 2-120 (120)
258 1zth_A RIO1 serine protein kin 99.8 6.3E-19 2.2E-23 188.9 10.4 140 670-820 48-218 (258)
259 2gj3_A Nitrogen fixation regul 99.7 2.5E-17 8.4E-22 153.6 16.0 115 473-590 6-120 (120)
260 3ewk_A Sensor protein; PAS dom 99.7 1.7E-17 5.8E-22 173.8 16.1 162 127-302 60-227 (227)
261 2pr5_A Blue-light photorecepto 99.7 2.4E-17 8.2E-22 156.5 15.5 121 192-314 2-122 (132)
262 1n9l_A PHOT-LOV1, putative blu 99.7 3E-17 1E-21 150.7 15.2 108 198-305 2-109 (109)
263 3ue6_A Aureochrome1; PAS/LOV d 99.7 8.9E-17 3E-21 157.7 16.6 141 174-314 20-160 (166)
264 3p7n_A Sensor histidine kinase 99.7 6E-17 2E-21 173.0 15.5 136 175-310 49-184 (258)
265 2pr5_A Blue-light photorecepto 99.7 1.4E-16 4.7E-21 151.2 15.4 116 475-592 2-117 (132)
266 1n9l_A PHOT-LOV1, putative blu 99.7 2.6E-16 8.9E-21 144.4 15.7 108 481-588 2-109 (109)
267 4hia_A LOV protein; PAS, HTH, 99.7 1.4E-16 4.7E-21 158.9 14.5 128 187-314 5-132 (176)
268 4hia_A LOV protein; PAS, HTH, 99.7 2.4E-16 8.2E-21 157.1 15.8 120 473-595 8-130 (176)
269 3rty_A Period circadian protei 99.7 4.1E-16 1.4E-20 172.3 18.0 108 482-592 154-267 (339)
270 3mr0_A Sensory box histidine k 99.7 3.2E-16 1.1E-20 151.0 15.0 131 182-315 2-134 (142)
271 3f1p_B ARYL hydrocarbon recept 99.7 1.8E-16 6.2E-21 147.6 10.9 115 474-591 4-120 (121)
272 3p7n_A Sensor histidine kinase 99.7 3.4E-16 1.2E-20 167.1 14.5 132 457-591 47-182 (258)
273 3t50_A Blue-light-activated hi 99.7 7.8E-16 2.7E-20 143.9 13.7 122 194-315 2-123 (128)
274 3f1p_B ARYL hydrocarbon recept 99.7 2.3E-16 7.8E-21 147.0 9.7 116 190-308 3-120 (121)
275 3ue6_A Aureochrome1; PAS/LOV d 99.6 6.6E-16 2.3E-20 151.4 13.1 129 461-592 23-155 (166)
276 3f1p_A Endothelial PAS domain- 99.6 5.4E-16 1.8E-20 143.4 10.5 109 480-591 7-116 (117)
277 3mr0_A Sensory box histidine k 99.6 2.5E-15 8.5E-20 144.7 15.6 120 471-593 8-129 (142)
278 1d06_A Nitrogen fixation regul 99.6 3.8E-16 1.3E-20 147.7 9.3 125 175-304 2-130 (130)
279 4gyi_A RIO2 kinase; protein ki 99.6 5E-16 1.7E-20 173.5 11.0 140 670-820 96-264 (397)
280 3sw1_A Sensory box protein; li 99.6 4.7E-15 1.6E-19 144.8 16.0 132 185-319 21-155 (162)
281 3t50_A Blue-light-activated hi 99.6 2.4E-15 8.2E-20 140.6 13.2 117 477-596 2-121 (128)
282 2r78_A Sensor protein; sensory 99.6 4.9E-15 1.7E-19 137.6 14.6 114 182-304 4-117 (117)
283 4eet_B Phototropin-2; LOV, blu 99.6 1.1E-14 3.7E-19 132.4 16.0 111 477-590 2-115 (115)
284 1d06_A Nitrogen fixation regul 99.6 4.2E-15 1.4E-19 140.5 13.7 124 459-587 2-130 (130)
285 4eet_B Phototropin-2; LOV, blu 99.6 7.8E-15 2.7E-19 133.3 15.0 114 194-307 2-115 (115)
286 3nja_A Probable ggdef family p 99.6 2.1E-15 7.3E-20 139.3 10.8 123 183-308 1-125 (125)
287 3f1p_A Endothelial PAS domain- 99.6 9.5E-16 3.3E-20 141.6 8.4 108 198-308 8-116 (117)
288 3mqq_A Transcriptional regulat 99.6 1.6E-15 5.5E-20 140.9 9.4 115 190-309 4-119 (120)
289 3mqq_A Transcriptional regulat 99.6 2.1E-15 7.3E-20 140.1 9.6 116 472-592 3-119 (120)
290 2z6d_A Phototropin-2; PAS-fold 99.6 1.7E-14 5.9E-19 132.6 15.7 127 186-312 3-129 (130)
291 2vv6_A FIXL, sensor protein FI 99.6 5.8E-15 2E-19 137.0 11.5 113 197-314 1-117 (119)
292 3lyx_A Sensory BOX/ggdef domai 99.6 1.8E-14 6.2E-19 131.5 14.6 121 186-309 4-124 (124)
293 3nja_A Probable ggdef family p 99.6 7.1E-15 2.4E-19 135.8 11.9 117 472-591 7-125 (125)
294 2v0u_A NPH1-1, LOV2; kinase, t 99.6 2.7E-14 9.3E-19 134.6 16.1 139 474-622 4-145 (146)
295 3k3c_A Protein RV1364C/MT1410; 99.6 2.5E-15 8.4E-20 146.7 8.9 125 185-314 13-143 (158)
296 2z6d_A Phototropin-2; PAS-fold 99.6 9.2E-14 3.1E-18 127.7 17.1 119 472-593 6-127 (130)
297 3bwl_A Sensor protein; structu 99.6 1E-14 3.5E-19 136.2 10.6 124 173-304 1-126 (126)
298 2r78_A Sensor protein; sensory 99.5 5.2E-14 1.8E-18 130.6 14.7 107 472-587 11-117 (117)
299 2vv6_A FIXL, sensor protein FI 99.5 1.9E-14 6.5E-19 133.5 11.6 110 481-595 2-115 (119)
300 3lyx_A Sensory BOX/ggdef domai 99.5 5.4E-14 1.9E-18 128.3 14.1 116 473-591 8-123 (124)
301 3mxq_A Sensor protein; PSI2, M 99.5 6.4E-15 2.2E-19 144.1 8.0 125 182-310 15-151 (152)
302 2wkq_A NPH1-1, RAS-related C3 99.5 4.2E-14 1.4E-18 156.7 15.5 116 475-593 14-132 (332)
303 3h9w_A Diguanylate cyclase wit 99.5 1.2E-14 4.2E-19 133.8 9.3 110 481-593 2-113 (115)
304 2wkq_A NPH1-1, RAS-related C3 99.5 3.9E-14 1.3E-18 157.0 14.6 122 193-314 15-136 (332)
305 3luq_A Sensor protein; PAS, hi 99.5 6.7E-14 2.3E-18 127.0 13.1 113 188-304 2-114 (114)
306 3k3c_A Protein RV1364C/MT1410; 99.5 2.7E-14 9.1E-19 139.3 10.3 120 468-592 13-138 (158)
307 3sw1_A Sensory box protein; li 99.5 5.8E-14 2E-18 137.0 12.5 118 472-592 25-145 (162)
308 3h9w_A Diguanylate cyclase wit 99.5 2.4E-14 8.3E-19 131.8 9.1 112 198-311 2-114 (115)
309 3kx0_X Uncharacterized protein 99.5 3.4E-14 1.2E-18 143.5 10.9 124 185-313 33-162 (185)
310 3bwl_A Sensor protein; structu 99.5 1.1E-13 3.8E-18 129.2 13.6 123 457-587 1-126 (126)
311 3mxq_A Sensor protein; PSI2, M 99.5 2.5E-14 8.5E-19 139.9 8.6 122 467-592 16-150 (152)
312 3eeh_A Putative light and redo 99.5 5.6E-14 1.9E-18 128.8 10.1 121 180-304 2-125 (125)
313 3luq_A Sensor protein; PAS, hi 99.5 2E-13 6.9E-18 123.8 13.6 111 473-587 4-114 (114)
314 4dj3_A Period circadian protei 99.5 1.6E-12 5.5E-17 142.1 22.7 106 483-591 175-284 (317)
315 3kx0_X Uncharacterized protein 99.5 5.5E-14 1.9E-18 141.9 9.5 141 468-615 33-179 (185)
316 2kdk_A ARYL hydrocarbon recept 99.5 2.2E-13 7.7E-18 126.1 12.6 114 475-591 6-121 (121)
317 2v0u_A NPH1-1, LOV2; kinase, t 99.5 6.1E-13 2.1E-17 125.2 14.9 121 191-311 4-124 (146)
318 3icy_A Sensor protein; sensory 99.5 7.9E-14 2.7E-18 127.7 8.1 115 187-304 2-118 (118)
319 1byw_A Protein (human ERG pota 99.5 1E-12 3.6E-17 116.9 15.3 107 200-306 2-110 (110)
320 3icy_A Sensor protein; sensory 99.5 7.5E-14 2.6E-18 127.9 8.0 113 472-587 4-118 (118)
321 3olo_A Two-component sensor hi 99.4 3.3E-13 1.1E-17 123.6 11.4 114 181-304 5-118 (118)
322 2kdk_A ARYL hydrocarbon recept 99.4 2.7E-13 9.2E-18 125.5 10.6 111 194-307 8-120 (121)
323 3d72_A Vivid PAS protein VVD; 99.4 5.5E-13 1.9E-17 128.3 12.9 127 167-302 12-149 (149)
324 3eeh_A Putative light and redo 99.4 2.6E-13 8.7E-18 124.4 9.8 112 472-587 11-125 (125)
325 1v9y_A Heme PAS sensor protein 99.4 2.4E-13 8.1E-18 132.7 9.7 139 171-314 22-164 (167)
326 2l0w_A Potassium voltage-gated 99.4 3.8E-12 1.3E-16 118.6 15.9 118 189-306 19-138 (138)
327 3mjq_A Uncharacterized protein 99.4 4.2E-13 1.4E-17 124.2 8.9 118 191-314 1-118 (126)
328 4dj2_A Period circadian protei 99.4 1.7E-12 5.7E-17 142.1 14.9 108 482-592 176-286 (320)
329 3mjq_A Uncharacterized protein 99.4 4.8E-13 1.6E-17 123.8 9.0 116 475-596 2-117 (126)
330 3gdi_A Period circadian protei 99.4 2.3E-12 8E-17 140.4 15.3 106 483-591 166-274 (309)
331 1byw_A Protein (human ERG pota 99.4 5.2E-12 1.8E-16 112.3 15.1 107 483-589 2-110 (110)
332 3olo_A Two-component sensor hi 99.4 1.1E-12 3.9E-17 119.9 10.9 105 473-587 14-118 (118)
333 1v9y_A Heme PAS sensor protein 99.4 1.8E-12 6.1E-17 126.4 11.3 136 455-595 22-162 (167)
334 4eho_A Bacteriophytochrome, PA 99.4 3.1E-13 1.1E-17 162.7 6.9 118 472-593 518-635 (635)
335 2l0w_A Potassium voltage-gated 99.4 7.2E-12 2.5E-16 116.7 14.2 113 474-589 21-138 (138)
336 3mfx_A Sensory BOX/ggdef famil 99.4 2.1E-12 7.2E-17 122.6 10.4 112 188-305 6-124 (129)
337 3d72_A Vivid PAS protein VVD; 99.4 3.6E-12 1.2E-16 122.5 12.0 108 474-585 28-149 (149)
338 3vol_A Aerotaxis transducer AE 99.3 9.3E-12 3.2E-16 130.9 13.7 118 184-314 17-146 (233)
339 3mfx_A Sensory BOX/ggdef famil 99.3 4.4E-12 1.5E-16 120.4 10.0 111 473-589 8-125 (129)
340 4eho_A Bacteriophytochrome, PA 99.3 2.2E-13 7.5E-18 164.0 0.2 119 188-310 517-635 (635)
341 3tm0_A Aminoglycoside 3'-phosp 99.2 1.6E-11 5.4E-16 131.2 10.5 140 668-819 13-212 (263)
342 3fc7_A HTR-like protein, senso 99.2 4.8E-12 1.7E-16 117.1 5.5 108 187-304 17-125 (125)
343 4hi4_A Aerotaxis transducer AE 99.2 5.7E-11 1.9E-15 110.7 12.5 106 188-306 4-121 (121)
344 2qkp_A Uncharacterized protein 99.2 2.2E-11 7.6E-16 118.8 9.7 122 187-314 17-141 (151)
345 3fc7_A HTR-like protein, senso 99.2 1E-11 3.4E-16 114.9 5.8 108 470-587 17-125 (125)
346 4f3l_A Mclock, circadian locom 99.2 1.6E-11 5.5E-16 137.8 8.4 108 200-310 252-360 (361)
347 3vol_A Aerotaxis transducer AE 99.2 7.6E-11 2.6E-15 123.9 12.4 107 473-592 23-141 (233)
348 2vlg_A Sporulation kinase A; h 99.2 2.3E-11 7.7E-16 112.2 7.1 94 193-292 3-96 (111)
349 4hi4_A Aerotaxis transducer AE 99.2 1.7E-10 5.8E-15 107.4 12.3 104 473-589 6-121 (121)
350 3fg8_A Uncharacterized protein 99.2 1.5E-11 5E-16 114.1 5.0 107 472-589 12-118 (118)
351 2vlg_A Sporulation kinase A; h 99.2 3.7E-11 1.3E-15 110.8 7.4 93 476-574 3-95 (111)
352 3fg8_A Uncharacterized protein 99.2 9.9E-12 3.4E-16 115.2 3.6 112 184-306 7-118 (118)
353 3b33_A Sensor protein; structu 99.2 1.2E-10 4E-15 106.6 10.3 107 190-304 8-115 (115)
354 2qkp_A Uncharacterized protein 99.1 1.7E-10 5.9E-15 112.5 10.7 117 474-596 21-140 (151)
355 3b33_A Sensor protein; structu 99.1 2.6E-10 8.8E-15 104.2 10.7 106 474-587 9-115 (115)
356 4f3l_B BMAL1B; BHLH, PAS, circ 99.1 7E-11 2.4E-15 133.7 8.3 108 198-308 277-386 (387)
357 1ll8_A PAS kinase; PAS domain, 99.0 6.2E-11 2.1E-15 108.6 3.6 102 197-304 6-113 (114)
358 1ll8_A PAS kinase; PAS domain, 99.0 8.3E-11 2.8E-15 107.7 3.7 103 480-588 6-114 (114)
359 1nd4_A Aminoglycoside 3'-phosp 99.0 4.7E-10 1.6E-14 119.1 10.0 135 669-820 20-214 (264)
360 3a0r_A Sensor protein; four he 99.0 2.4E-10 8.1E-15 127.1 7.8 137 473-619 9-146 (349)
361 3dxp_A Putative acyl-COA dehyd 99.0 1.2E-09 4E-14 122.5 11.2 142 671-820 40-248 (359)
362 2w0n_A Sensor protein DCUS; si 99.0 1.6E-10 5.4E-15 105.3 2.7 109 181-304 7-118 (118)
363 3cax_A Uncharacterized protein 99.0 9E-10 3.1E-14 123.7 9.2 122 184-314 234-355 (369)
364 2ykf_A Pdtas, probable sensor 98.5 9.8E-11 3.4E-15 127.9 0.0 112 475-596 173-293 (305)
365 3a0r_A Sensor protein; four he 98.9 3.4E-10 1.2E-14 125.8 3.9 121 184-314 3-124 (349)
366 3a0s_A Sensor protein; PAS-fol 98.9 9.9E-09 3.4E-13 88.4 12.1 95 198-302 1-96 (96)
367 3a0s_A Sensor protein; PAS-fol 98.9 1.6E-08 5.5E-13 87.1 11.8 95 481-585 1-96 (96)
368 3cax_A Uncharacterized protein 98.9 4E-09 1.4E-13 118.5 9.9 116 473-597 240-355 (369)
369 1nwz_A PYP, photoactive yellow 98.8 2E-08 6.8E-13 93.3 12.0 100 192-297 20-121 (125)
370 3sg8_A APH(2'')-ID; antibiotic 98.8 1.3E-09 4.5E-14 119.1 4.7 197 674-899 25-288 (304)
371 2w0n_A Sensor protein DCUS; si 98.8 6.6E-10 2.3E-14 101.1 1.6 101 472-587 15-118 (118)
372 1mzu_A PPR; photoactive yellow 98.8 1.8E-08 6.2E-13 93.7 11.2 99 193-297 26-126 (129)
373 3rty_A Period circadian protei 98.8 1.2E-08 4.2E-13 112.4 9.9 106 199-307 154-265 (339)
374 2jhe_A Transcription regulator 98.8 5.5E-09 1.9E-13 105.2 6.5 108 185-307 76-189 (190)
375 2ykf_A Pdtas, probable sensor 98.2 7.8E-10 2.7E-14 120.7 0.0 181 120-315 84-295 (305)
376 1nwz_A PYP, photoactive yellow 98.8 4.6E-08 1.6E-12 90.8 11.6 100 475-580 20-121 (125)
377 1mzu_A PPR; photoactive yellow 98.7 5.8E-08 2E-12 90.3 11.2 100 475-580 25-126 (129)
378 2jhe_A Transcription regulator 98.7 9.2E-09 3.1E-13 103.6 5.9 104 473-591 81-190 (190)
379 4dj3_A Period circadian protei 98.6 1.3E-07 4.3E-12 103.3 12.2 97 209-305 181-281 (317)
380 3r70_A Aminoglycoside phosphot 98.6 1.9E-07 6.5E-12 102.7 13.0 133 670-820 38-237 (320)
381 3gdi_A Period circadian protei 98.6 2.3E-07 7.8E-12 101.0 11.7 98 209-306 172-272 (309)
382 4dj2_A Period circadian protei 98.5 1.8E-07 6.2E-12 102.2 9.6 98 209-306 183-283 (320)
383 3tdw_A Gentamicin resistance p 98.4 2.2E-06 7.6E-11 93.5 13.9 133 674-820 24-224 (306)
384 4gkh_A Aminoglycoside 3'-phosp 98.3 4.7E-06 1.6E-10 88.8 13.6 132 677-820 32-223 (272)
385 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.7E-06 1.3E-10 94.0 12.1 77 671-757 43-122 (362)
386 3d1u_A Putative fructosamine-3 98.0 1.6E-05 5.5E-10 85.8 10.5 77 672-756 18-97 (288)
387 2olc_A MTR kinase, methylthior 98.0 1.2E-05 4.2E-10 90.9 9.2 81 673-755 34-121 (397)
388 3ats_A Putative uncharacterize 97.9 4.9E-05 1.7E-09 84.5 12.8 86 673-758 24-122 (357)
389 2q83_A YTAA protein; 2635576, 97.9 9.3E-05 3.2E-09 81.4 13.5 138 674-820 37-252 (346)
390 3jr1_A Putative fructosamine-3 97.5 0.00057 1.9E-08 74.4 13.5 76 673-756 40-118 (312)
391 2pyw_A Uncharacterized protein 97.2 0.00068 2.3E-08 77.1 9.8 77 673-753 38-122 (420)
392 3dxq_A Choline/ethanolamine ki 97.2 0.00037 1.3E-08 75.5 6.7 72 674-757 23-96 (301)
393 3feg_A Choline/ethanolamine ki 97.2 0.0008 2.7E-08 75.2 9.4 138 675-820 56-254 (379)
394 1oj5_A Steroid receptor coacti 97.2 0.00032 1.1E-08 64.8 4.8 97 208-305 13-114 (132)
395 2ppq_A HSK, HK, homoserine kin 97.2 0.00093 3.2E-08 72.8 9.5 141 673-820 26-217 (322)
396 1nw1_A Choline kinase (49.2 KD 97.1 0.0013 4.5E-08 74.9 10.4 75 674-757 78-160 (429)
397 3c5i_A Choline kinase; choline 96.9 0.002 7E-08 71.7 9.2 75 674-756 38-121 (369)
398 2qg7_A Ethanolamine kinase PV0 96.8 0.0058 2E-07 70.0 12.8 76 674-757 113-189 (458)
399 3f7w_A Putative fructosamine-3 96.8 0.0058 2E-07 65.4 11.5 81 668-756 14-97 (288)
400 3csv_A Aminoglycoside phosphot 96.8 0.0021 7.2E-08 70.4 8.1 138 675-821 24-218 (333)
401 1oj5_A Steroid receptor coacti 96.8 0.0014 4.7E-08 60.6 5.3 102 483-588 8-114 (132)
402 3i1a_A Spectinomycin phosphotr 96.7 0.0064 2.2E-07 66.9 10.9 31 790-820 206-236 (339)
403 1zyl_A Hypothetical protein YI 96.6 0.0065 2.2E-07 66.2 10.6 138 675-820 32-223 (328)
404 3f2s_A CK, chetk-alpha, cholin 96.6 0.0097 3.3E-07 66.8 11.6 144 673-820 56-280 (401)
405 3mes_A Choline kinase; malaria 95.7 0.017 5.7E-07 65.5 8.3 75 674-756 75-157 (424)
406 2yle_A Protein spire homolog 1 94.7 0.067 2.3E-06 54.1 7.9 104 754-899 33-138 (229)
407 3g15_A CK, chetk-alpha, cholin 94.3 0.17 6E-06 56.7 11.2 29 792-820 246-280 (401)
408 2ool_A Sensor protein; bacteri 84.3 0.61 2.1E-05 50.7 3.9 77 484-566 44-124 (337)
409 2ool_A Sensor protein; bacteri 82.3 1.6 5.4E-05 47.4 6.2 77 200-282 42-123 (337)
410 4ann_A ESSB; membrane protein, 81.8 4.4 0.00015 40.7 8.8 84 727-818 43-126 (215)
411 1p0z_A Sensor kinase CITA; tra 73.2 24 0.00082 32.0 10.7 89 188-305 38-127 (131)
412 4dah_A Sporulation kinase D; a 72.3 16 0.00056 36.0 10.1 99 186-309 55-155 (217)
413 4ano_A ESSB; membrane protein, 68.2 9.5 0.00032 38.4 7.0 85 727-820 48-133 (219)
414 3ls8_A Phosphatidylinositol 3- 57.4 1.2E+02 0.004 35.4 14.4 82 732-818 402-500 (614)
415 3cxl_A N-chimerin; SH2, RHO-GA 56.6 1.2 4.2E-05 50.7 -2.2 64 672-739 145-214 (463)
416 2x6h_A GH13170P, VPS34, phosph 56.3 1.1E+02 0.0036 36.4 14.1 82 732-818 476-574 (696)
417 3by8_A Sensor protein DCUS; hi 55.7 51 0.0017 30.3 9.3 91 187-307 43-134 (142)
418 1p0z_A Sensor kinase CITA; tra 51.6 38 0.0013 30.6 7.6 77 483-588 51-127 (131)
419 4dah_A Sporulation kinase D; a 49.4 31 0.0011 33.9 7.2 90 474-588 60-151 (217)
420 1cja_A Protein (actin-fragmin 47.8 67 0.0023 34.4 9.6 139 671-820 71-237 (342)
421 3lif_A Putative diguanylate cy 47.4 91 0.0031 31.2 10.6 96 186-306 55-154 (254)
422 4e04_A Bacteriophytochrome (li 45.2 45 0.0015 35.7 7.8 54 483-543 30-83 (327)
423 4e04_A Bacteriophytochrome (li 42.9 36 0.0012 36.4 6.6 53 202-261 32-84 (327)
424 4ew7_A Conjugative transfer: r 41.7 25 0.00084 30.4 4.0 43 183-228 14-56 (127)
425 3hhm_A Phosphatidylinositol-4, 40.7 1.6E+02 0.0055 36.7 12.6 24 795-818 937-960 (1091)
426 4ew7_A Conjugative transfer: r 34.7 2.3E+02 0.0077 24.6 9.0 90 474-570 22-111 (127)
427 3s7o_A Bacteriophytochrome; bi 29.2 22 0.00077 38.2 2.3 41 201-243 54-94 (343)
428 3s7o_A Bacteriophytochrome; bi 28.7 25 0.00085 37.9 2.5 42 483-526 53-94 (343)
429 2y3a_A Phosphatidylinositol-4, 28.1 48 0.0017 41.4 5.2 24 795-818 940-963 (1092)
430 3lif_A Putative diguanylate cy 27.6 1.8E+02 0.0063 28.8 9.0 89 474-587 60-152 (254)
431 2wxf_A Phosphatidylinositol-4, 23.6 46 0.0016 40.9 3.9 24 795-818 788-811 (940)
432 3c8c_A Methyl-accepting chemot 21.5 3.4E+02 0.012 26.0 9.6 54 251-306 93-147 (240)
433 3clo_A Transcriptional regulat 21.2 5E+02 0.017 26.0 10.9 42 189-232 33-74 (258)
434 1e7u_A Phosphatidylinositol 3- 20.9 1E+02 0.0034 38.1 6.0 24 795-818 804-827 (961)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.8e-51 Score=447.30 Aligned_cols=234 Identities=36% Similarity=0.627 Sum_probs=211.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+++|+.|+|||||+++++|++++++|||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999999999999999999876554555667899999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||+||+|.+++.+. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+......
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~-- 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-- 186 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT--
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC--
Confidence 9999999999999875 459999999999999999999999999999999999999999999999999997543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
......++|||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+++
T Consensus 187 -----------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 243 (311)
T 4aw0_A 187 -----------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243 (311)
T ss_dssp -----------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred -----------------------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 112345779999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcccCCC
Q 002342 908 ANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 908 ~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.+|.++.+.+|.. .|.+++||
T Consensus 244 ~~i~~~~~~~p~~--~s~~~~dl 264 (311)
T 4aw0_A 244 AKIIKLEYDFPEK--FFPKARDL 264 (311)
T ss_dssp HHHHHTCCCCCTT--CCHHHHHH
T ss_pred HHHHcCCCCCCcc--cCHHHHHH
Confidence 9999999999975 46666665
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.3e-50 Score=443.79 Aligned_cols=234 Identities=24% Similarity=0.457 Sum_probs=200.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
+++|++++.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.|+|||||+++++|.+++.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999999987643 344567889999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||+||+|.+++..+....+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~---- 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS---- 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH----
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC----
Confidence 9999999999999876666789999999999999999999999999999999999999999999999999965321
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
......+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+++
T Consensus 178 -----------------------~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 178 -----------------------TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp -----------------------HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 011234568999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcccCCC
Q 002342 908 ANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 908 ~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.+|.++.++. .+...|.++++|
T Consensus 235 ~~i~~~~~~~-~~~~~s~~~~~l 256 (350)
T 4b9d_A 235 LKIISGSFPP-VSLHYSYDLRSL 256 (350)
T ss_dssp HHHHHTCCCC-CCTTSCHHHHHH
T ss_pred HHHHcCCCCC-CCccCCHHHHHH
Confidence 9999987642 223345555554
No 3
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-48 Score=421.34 Aligned_cols=230 Identities=31% Similarity=0.515 Sum_probs=191.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+|+.++|||||+++++|.+++.+|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999999999999999999887655556667899999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||| +|+|.+++..+ +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---- 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---- 164 (275)
T ss_dssp EECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred EeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC----
Confidence 9999 78999999775 4599999999999999999999999999999999999999999999999999954321
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.....+.+||+.|||||++.+..| +.++|||||||+||+|++|++||.+.+...+
T Consensus 165 ------------------------~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~ 220 (275)
T 3hyh_A 165 ------------------------GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 220 (275)
T ss_dssp ----------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 112345689999999999998876 5799999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcccCCC
Q 002342 907 FANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
+++|.++.+.+|... |.++++|
T Consensus 221 ~~~i~~~~~~~p~~~--s~~~~~l 242 (275)
T 3hyh_A 221 FKNISNGVYTLPKFL--SPGAAGL 242 (275)
T ss_dssp HHHHHHTCCCCCTTS--CHHHHHH
T ss_pred HHHHHcCCCCCCCCC--CHHHHHH
Confidence 999999999998764 5555554
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.7e-48 Score=432.49 Aligned_cols=229 Identities=27% Similarity=0.416 Sum_probs=201.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
..|+++++||+|+||+||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999999765332 2345788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+||+|.+++... .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 151 Ey~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~----- 222 (346)
T 4fih_A 151 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----- 222 (346)
T ss_dssp CCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS-----
T ss_pred eCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC-----
Confidence 999999999999763 499999999999999999999999999999999999999999999999999965321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
......+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++.
T Consensus 223 ----------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 280 (346)
T 4fih_A 223 ----------------------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 280 (346)
T ss_dssp ----------------------SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred ----------------------CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 1123456799999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCC-CCCCCCCCCcccCCC
Q 002342 909 NILHKDL-KFPSSTPSSCKAANV 930 (934)
Q Consensus 909 ~i~~~~~-~~p~~~~~s~~~k~l 930 (934)
.|..+.. .++.+...|.+++||
T Consensus 281 ~i~~~~~~~~~~~~~~s~~~~dl 303 (346)
T 4fih_A 281 MIRDNLPPRLKNLHKVSPSLKGF 303 (346)
T ss_dssp HHHHSSCCCCSCGGGSCHHHHHH
T ss_pred HHHcCCCCCCCccccCCHHHHHH
Confidence 9987643 344444556666655
No 5
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.3e-49 Score=430.19 Aligned_cols=233 Identities=42% Similarity=0.734 Sum_probs=198.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.++|++++.||+|+||+||+|++. .+++.||||++.+....... ...+.+|+.+|++++|||||+++++|.+++
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 34568999999999999999999984 46889999999875433222 235778999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999999875 459999999999999999999999999999999999999999999999999996432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. ......+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+
T Consensus 178 ~---------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 178 D---------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C---------------------------CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 1 1123346789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 903 RQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
..+++.+|.++.+.+|... |.+++||
T Consensus 231 ~~~~~~~i~~~~~~~p~~~--s~~~~~l 256 (304)
T 3ubd_A 231 RKETMTMILKAKLGMPQFL--SPEAQSL 256 (304)
T ss_dssp HHHHHHHHHHCCCCCCTTS--CHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCcC--CHHHHHH
Confidence 9999999999999998753 5555554
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=434.56 Aligned_cols=229 Identities=27% Similarity=0.416 Sum_probs=201.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.|++++.||+|+||.||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999999865332 2345789999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+||+|.+++... .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 228 Ey~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~----- 299 (423)
T 4fie_A 228 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----- 299 (423)
T ss_dssp ECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS-----
T ss_pred eCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC-----
Confidence 999999999999753 499999999999999999999999999999999999999999999999999965321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~ 908 (934)
......+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+++.
T Consensus 300 ----------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 357 (423)
T 4fie_A 300 ----------------------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 357 (423)
T ss_dssp ----------------------SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred ----------------------CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 1123456799999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCC-CCCCCCCCCcccCCC
Q 002342 909 NILHKDL-KFPSSTPSSCKAANV 930 (934)
Q Consensus 909 ~i~~~~~-~~p~~~~~s~~~k~l 930 (934)
.|..+.. .++.+...|..++||
T Consensus 358 ~i~~~~~~~~~~~~~~s~~~~dl 380 (423)
T 4fie_A 358 MIRDNLPPRLKNLHKVSPSLKGF 380 (423)
T ss_dssp HHHHSCCCCCSCTTSSCHHHHHH
T ss_pred HHHcCCCCCCcccccCCHHHHHH
Confidence 9987643 444445566666665
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.2e-47 Score=422.40 Aligned_cols=220 Identities=25% Similarity=0.382 Sum_probs=191.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..+.|++.++||+|+||.||+|+++.+|+.||||++++... ..+|+.+|+.++|||||+++++|.+++.+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35679999999999999999999999999999999986532 2469999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~~~~ 825 (934)
|||||+||+|.++++.. +.+++..++.|+.||+.||+|||++|||||||||+||||+.+| .+||+|||+|+......
T Consensus 128 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999999875 4599999999999999999999999999999999999999887 69999999997643211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
. .........++||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+
T Consensus 206 ~----------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 206 L----------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred c----------------------ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 0 001122345789999999999999999999999999999999999999999999888
Q ss_pred HHHHHHcCCCCCC
Q 002342 906 TFANILHKDLKFP 918 (934)
Q Consensus 906 ~~~~i~~~~~~~p 918 (934)
++.+|..+..+++
T Consensus 264 ~~~~i~~~~~~~~ 276 (336)
T 4g3f_A 264 LCLKIASEPPPIR 276 (336)
T ss_dssp CHHHHHHSCCGGG
T ss_pred HHHHHHcCCCCch
Confidence 9999998876543
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.8e-46 Score=403.62 Aligned_cols=227 Identities=23% Similarity=0.370 Sum_probs=189.1
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----CCeEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCL 746 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~~~~~l 746 (934)
|++.+.||+|+||+||+|.++.++..||+|.+.+... .......+.+|+.+|+.|+|||||+++++|.+ +.++||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4778889999999999999999999999999986533 44556788999999999999999999999975 457899
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEec-CCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~ 823 (934)
|||||+||+|.+++.+. +.+++..++.|+.||+.||+|||++| ||||||||+||||+. +|.+||+|||+|+...
T Consensus 107 vmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~- 183 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR- 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC-
Confidence 99999999999999874 45999999999999999999999998 999999999999985 7999999999995421
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.....+.+||+.|||||++.+ .|+.++|||||||+||+|++|++||.+.+.
T Consensus 184 ----------------------------~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~ 234 (290)
T 3fpq_A 184 ----------------------------ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp ----------------------------TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred ----------------------------CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 112346789999999999875 599999999999999999999999987554
Q ss_pred -HHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 904 -QKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 904 -~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
..+++.+..+..+.+.+...++++++|
T Consensus 235 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 235 AAQIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp HHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence 556666666554322222334445443
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.9e-45 Score=402.83 Aligned_cols=228 Identities=22% Similarity=0.349 Sum_probs=195.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+..++|.+.+.||+|+||+||+|++. .++..||||+++.. .....+.+.+|+++|++++|||||++++++.
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 456678999999999999999999875 36889999999754 3455678999999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
+++.+|||||||++|+|.+++.... ...+++..+..++.||+.||.|||+++||||||||+|||++.++
T Consensus 86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence 9999999999999999999997532 34699999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||+|+..... .........+||+.|||||++.+..|+.++|||||||+|
T Consensus 166 ~~Ki~DFGla~~~~~~-------------------------~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl 220 (299)
T 4asz_A 166 LVKIGDFGMSRDVYST-------------------------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220 (299)
T ss_dssp CEEECCCSCHHHHTGG-------------------------GCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred cEEECCcccceecCCC-------------------------CceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 9999999999643211 011123345799999999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSS 920 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~ 920 (934)
|||+| |++||.+.+..+++..|.++.. ++|..
T Consensus 221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~ 254 (299)
T 4asz_A 221 WEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT 254 (299)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTT
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence 99998 9999999999999999998764 55544
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=396.89 Aligned_cols=226 Identities=21% Similarity=0.314 Sum_probs=187.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.|++..++|++.+.||+|+||+||++++.. .||||+++.. .......+.+.+|+.+|++++|||||++++++.. +
T Consensus 30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~-~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~ 104 (307)
T 3omv_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D 104 (307)
T ss_dssp CCBCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred CcEEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEec-CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-C
Confidence 456788999999999999999999998633 5999998753 2345667889999999999999999999998754 5
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||+||+|.+++.... ..+++..+..|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+...
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 6899999999999999997653 459999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.. .........+||+.|||||++.+ ..|+.++|||||||+||||++|++||.
T Consensus 184 ~~-------------------------~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 184 RW-------------------------SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cC-------------------------CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 11 01122345689999999999964 468999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCC
Q 002342 900 GKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~p~ 919 (934)
+.+....+..++......|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~p~ 258 (307)
T 3omv_A 239 HINNRDQIIFMVGRGYASPD 258 (307)
T ss_dssp TCCCHHHHHHHHHTTCCCCC
T ss_pred CCChHHHHHHHHhcCCCCCC
Confidence 88777666666665554443
No 11
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=399.28 Aligned_cols=228 Identities=22% Similarity=0.312 Sum_probs=190.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+..++|.+.++||+|+||+||+|++. .+++.||||+++.. .....+.+.+|+++|++++|||||++++++.
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 113 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCT 113 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 355678999999999999999999875 36889999999753 4455678999999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~ 806 (934)
+.+.+|||||||++|+|.+++.... ...+++..+..|+.||+.||.|||+++||||||||+|||++.
T Consensus 114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence 9999999999999999999987542 235999999999999999999999999999999999999999
Q ss_pred CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHH
Q 002342 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (934)
Q Consensus 807 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~ 886 (934)
++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||
T Consensus 194 ~~~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv 248 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248 (329)
T ss_dssp TTEEEECCCC-----------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCcEEEcccccceeccCCC-------------------------cceecCcccccccccChhhhcCCCCCccccccchHH
Confidence 9999999999996532110 112234568999999999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCC
Q 002342 887 LLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSS 920 (934)
Q Consensus 887 iL~ellt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~ 920 (934)
+||||+| |++||.+.+..+++..|.++. +.+|..
T Consensus 249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~ 284 (329)
T 4aoj_A 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 284 (329)
T ss_dssp HHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTT
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCccc
Confidence 9999998 999999999999999998865 455553
No 12
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-44 Score=396.15 Aligned_cols=229 Identities=22% Similarity=0.354 Sum_probs=195.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
++....+++.+.||+|+||+||++... .+++.||||.++... .....+.+.+|+.+|++++|||||++++++.
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 355678999999999999999999863 467899999997542 3344567899999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~ 805 (934)
+++.+|||||||++|+|.+++..+. ...+++..+..|+.||+.||+|||+++||||||||+|||++
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence 9999999999999999999996532 13589999999999999999999999999999999999999
Q ss_pred cCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHH
Q 002342 806 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 885 (934)
Q Consensus 806 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG 885 (934)
.++.+||+|||+|+..... .........+||+.|||||++.+..|+.++||||||
T Consensus 180 ~~~~~Ki~DFGlar~~~~~-------------------------~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG 234 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAA-------------------------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234 (308)
T ss_dssp GGGCEEECCSCCBCGGGGG-------------------------GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCEEECCcccceeccCC-------------------------CceeEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence 9999999999999653211 111233456899999999999999999999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCC
Q 002342 886 ILLYEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSS 920 (934)
Q Consensus 886 ~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~ 920 (934)
|+||||+| |.+||.+.+..+++..|.++.. +.|..
T Consensus 235 vvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~ 271 (308)
T 4gt4_A 235 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD 271 (308)
T ss_dssp HHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCccc
Confidence 99999998 9999999999999999988763 44443
No 13
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.4e-45 Score=430.30 Aligned_cols=236 Identities=31% Similarity=0.561 Sum_probs=201.9
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHH---HHHHHhCCCCCccceeEEE
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAE---REILDMLDHPFVPALYASF 738 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E---~~il~~l~hp~Iv~l~~~~ 738 (934)
....+.+++|++++.||+|+||+||+|+++.+|+.||||++.+.............+| +.+++.++|||||+++++|
T Consensus 182 ~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f 261 (689)
T 3v5w_A 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 261 (689)
T ss_dssp TTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred cCCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE
Confidence 3445677899999999999999999999999999999999987544333333334444 5666677999999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
++.+++|||||||+||+|.+++.+. +.+++..+++|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|
T Consensus 262 ~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 262 HTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEeccccee
Confidence 9999999999999999999999875 45999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+.... ....+.|||+.|||||++.+ ..|+.++|||||||+||+|++|++|
T Consensus 340 ~~~~~-----------------------------~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~P 390 (689)
T 3v5w_A 340 CDFSK-----------------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390 (689)
T ss_dssp EECSS-----------------------------CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred eecCC-----------------------------CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 65321 12346799999999999964 6899999999999999999999999
Q ss_pred CCCC---CHHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 898 FRGK---TRQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 898 f~~~---~~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
|.+. +..++++.+....+.+|.. .|.+++||
T Consensus 391 F~~~~~~~~~~i~~~i~~~~~~~p~~--~S~~a~dL 424 (689)
T 3v5w_A 391 FRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRSL 424 (689)
T ss_dssp TCGGGCCCHHHHHHHHHHCCCCCCTT--SCHHHHHH
T ss_pred CCCCChHHHHHHHHhhcCCCCCCCcc--CCHHHHHH
Confidence 9863 4457788889999999875 46666665
No 14
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=403.12 Aligned_cols=220 Identities=25% Similarity=0.383 Sum_probs=189.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------~ 741 (934)
.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ........+.+|+++|+.|+|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 368999999999999999999999999999999997643 344556778899999999999999999999864 3
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+++||||||| +|+|.+++... +.+++..++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+..
T Consensus 132 ~~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 132 KSVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CCEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CEEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 6799999999 57899999764 45999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
..... .......+.+||+.|||||++.+. .|+.++|||||||++|+|++|++||.+
T Consensus 209 ~~~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 209 CTSPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccCcc-----------------------ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 22110 112234567999999999999875 568999999999999999999999999
Q ss_pred CCHHHHHHHHHcCC
Q 002342 901 KTRQKTFANILHKD 914 (934)
Q Consensus 901 ~~~~~~~~~i~~~~ 914 (934)
.+..+++.+|....
T Consensus 266 ~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 266 KNYVHQLQLIMMVL 279 (398)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 99999999987643
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.5e-43 Score=384.42 Aligned_cols=225 Identities=24% Similarity=0.383 Sum_probs=171.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC------
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT------ 742 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 742 (934)
++|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|+.|+|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46999999999999999999999999999999987542 3445567889999999999999999999997544
Q ss_pred ------eEEEEEEccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 743 ------HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 743 ------~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
++|||||||+||+|.+++..... .......++.++.||+.||+|||++|||||||||+|||++.+|.+||+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence 47999999999999999976532 23556778999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
|+|+.......... ...........++.+||+.|||||++.+..|+.++|||||||+||||++
T Consensus 163 Gla~~~~~~~~~~~---------------~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 163 GLVTAMDQDEEEQT---------------VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp CCC-----------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred ccceecCCCccccc---------------cccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 99976532211000 0000111233456789999999999999999999999999999999996
Q ss_pred CCCCCCCH-HHHHHHHHcC
Q 002342 896 TPFRGKTR-QKTFANILHK 913 (934)
Q Consensus 896 ~Pf~~~~~-~~~~~~i~~~ 913 (934)
||.+... ...+..+...
T Consensus 226 -Pf~~~~~~~~~~~~~~~~ 243 (299)
T 4g31_A 226 -PFSTQMERVRTLTDVRNL 243 (299)
T ss_dssp -CCSSHHHHHHHHHHHHTT
T ss_pred -CCCCccHHHHHHHHHhcC
Confidence 8865432 2334444443
No 16
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-43 Score=395.86 Aligned_cols=230 Identities=23% Similarity=0.357 Sum_probs=191.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~ 737 (934)
|++..++|++.+.||+|+||+||+|.+..++ +.||+|.+.... .......+.+|+.+|.+++| ||||+++++
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 5677789999999999999999999987643 689999987643 34456778999999999965 899999999
Q ss_pred EEe-CCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 738 FQT-KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
|.. ++.+|||||||++|+|.++++... ...+++..+..++.||+.||+|||+++||||||||+||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI 216 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence 865 467899999999999999997532 23589999999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
|++.++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVw 271 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDP-------------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCT-------------------------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred eeCCCCCEEECcchhhhhcccCC-------------------------CceeeccccccccccCHHHHhcCCCCCcccEe
Confidence 99999999999999996542111 11223456899999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHcCC-CCCCCC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQ-KTFANILHKD-LKFPSS 920 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~-~~~~~i~~~~-~~~p~~ 920 (934)
||||+||||+| |++||.+.+.. .+.+.+..+. +.+|..
T Consensus 272 S~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~ 312 (353)
T 4ase_A 272 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 312 (353)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTT
T ss_pred ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCcc
Confidence 99999999998 99999987654 4455555553 455544
No 17
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.8e-43 Score=415.99 Aligned_cols=231 Identities=27% Similarity=0.453 Sum_probs=204.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||+|.++.+|+.||+|++.+. .......+.+|+.+|+.|+|||||+++++|.+.+++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 47899999999999999999999999999999999764 234456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--CcEEEEecccCcccCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~--~~vkl~DFG~a~~~~~~~ 825 (934)
||||+||+|.+++..+. ..+++..++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 233 ~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~-- 309 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-- 309 (573)
T ss_dssp EECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--
T ss_pred EeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC--
Confidence 99999999999986543 459999999999999999999999999999999999999854 8999999999965421
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.....+.+||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+
T Consensus 310 --------------------------~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~ 363 (573)
T 3uto_A 310 --------------------------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363 (573)
T ss_dssp --------------------------TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred --------------------------CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence 112345689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 906 TFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
++.+|.++.+.+|.. ...|..++||
T Consensus 364 ~~~~i~~~~~~~~~~~~~~~s~~~~dl 390 (573)
T 3uto_A 364 TLRNVKSCDWNMDDSAFSGISEDGKDF 390 (573)
T ss_dssp HHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred HHHHHHhCCCCCCcccccCCCHHHHHH
Confidence 999999998877753 3456666655
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.7e-42 Score=385.17 Aligned_cols=234 Identities=25% Similarity=0.348 Sum_probs=178.8
Q ss_pred cCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.++|++.+.||+|+||+||+|+++ .+++.||+|.+.+.. ....+.+|+++|+.+ +||||++++++|.+.++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 368999999999999999999986 467899999986542 234678899999998 69999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a~~~~ 822 (934)
+|||||||+|++|.+++. .+++..++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+...
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 999999999999999984 38999999999999999999999999999999999999876 899999999997654
Q ss_pred CCCCCCCCcchhhh-ccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 823 CKPQLLLPTTNEKK-RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 823 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.............. ....................+.+||+.|||||++.+. .|+.++||||+||++|+|++|++||.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 32211100000000 0000000000011122334567899999999999875 589999999999999999999999964
Q ss_pred -CCHHHHHHHHH
Q 002342 901 -KTRQKTFANIL 911 (934)
Q Consensus 901 -~~~~~~~~~i~ 911 (934)
.+..+++.+|.
T Consensus 250 ~~~~~~~l~~I~ 261 (361)
T 4f9c_A 250 ASDDLTALAQIM 261 (361)
T ss_dssp CSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 55556666664
No 19
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=378.38 Aligned_cols=229 Identities=38% Similarity=0.743 Sum_probs=199.1
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~ 742 (934)
..+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+.+|..+|+.+ +||||++++++|.+.+
T Consensus 18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 97 (353)
T 3txo_A 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97 (353)
T ss_dssp -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence 346678999999999999999999999999999999999876444455667788999999988 7999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||+|++|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999999999765 459999999999999999999999999999999999999999999999999985321
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. ........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus 176 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 176 C---------------------------NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp C------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c---------------------------CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 1 1122346689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPSST 921 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~ 921 (934)
..+++.+|..+.+.+|.+.
T Consensus 229 ~~~~~~~i~~~~~~~p~~~ 247 (353)
T 3txo_A 229 EDDLFEAILNDEVVYPTWL 247 (353)
T ss_dssp HHHHHHHHHHCCCCCCTTS
T ss_pred HHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999764
No 20
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-40 Score=372.02 Aligned_cols=233 Identities=39% Similarity=0.767 Sum_probs=205.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus 2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 35679999999999999999999999999999999998754434445667889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||++||+|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 82 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-- 157 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-- 157 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc--
Confidence 999999999999999764 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+...
T Consensus 158 -------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 212 (337)
T 1o6l_A 158 -------------------------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp -------------------------TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred -------------------------CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence 1112346689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcccCC
Q 002342 906 TFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
++..|..+.+.+|... +..+++
T Consensus 213 ~~~~i~~~~~~~p~~~--s~~~~~ 234 (337)
T 1o6l_A 213 LFELILMEEIRFPRTL--SPEAKS 234 (337)
T ss_dssp HHHHHHHCCCCCCTTS--CHHHHH
T ss_pred HHHHHHcCCCCCCCCC--CHHHHH
Confidence 9999999999888653 444443
No 21
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.6e-40 Score=368.92 Aligned_cols=234 Identities=35% Similarity=0.712 Sum_probs=203.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++.+.||+|+||.||+|+++.+++.||||++++...........+..|..+|..+ +||||++++++|.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 35678999999999999999999999999999999999875433334456778899999877 99999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+|||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999999764 3599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 171 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 223 (345)
T 1xjd_A 171 ---------------------------GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223 (345)
T ss_dssp ---------------------------TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ---------------------------CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence 01123467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 904 QKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
.+++.+|..+...+|.+. +..+++
T Consensus 224 ~~~~~~i~~~~~~~p~~~--s~~~~~ 247 (345)
T 1xjd_A 224 EELFHSIRMDNPFYPRWL--EKEAKD 247 (345)
T ss_dssp HHHHHHHHHCCCCCCTTS--CHHHHH
T ss_pred HHHHHHHHhCCCCCCccc--CHHHHH
Confidence 999999999998888753 444443
No 22
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-40 Score=365.06 Aligned_cols=223 Identities=42% Similarity=0.832 Sum_probs=201.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 34678999999999999999999999999999999998754333345567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 83 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999999875 4599999999999999999999999999999999999999999999999999854311
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
...+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 159 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 210 (318)
T 1fot_A 159 ----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210 (318)
T ss_dssp ----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ----------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 1235689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002342 906 TFANILHKDLKFPSS 920 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~ 920 (934)
.+.+|..+.+.+|..
T Consensus 211 ~~~~i~~~~~~~p~~ 225 (318)
T 1fot_A 211 TYEKILNAELRFPPF 225 (318)
T ss_dssp HHHHHHHCCCCCCTT
T ss_pred HHHHHHhCCCCCCCC
Confidence 999999999888864
No 23
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-40 Score=381.74 Aligned_cols=237 Identities=35% Similarity=0.647 Sum_probs=205.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+++
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 35568999999999999999999999999999999999864332233334577899999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|......
T Consensus 145 ~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999998753 4999999999999999999999999999999999999999999999999999653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
......+.+||+.|+|||++.+.. ++.++|||||||+||+|++|++||.+
T Consensus 222 --------------------------~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 222 --------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp --------------------------SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred --------------------------CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 011234668999999999998765 78899999999999999999999999
Q ss_pred CCHHHHHHHHHcCC--CCCCCCCCCCcccCCC
Q 002342 901 KTRQKTFANILHKD--LKFPSSTPSSCKAANV 930 (934)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~k~l 930 (934)
.+..+++.+|..+. +.+|.+...|..+++|
T Consensus 276 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l 307 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307 (410)
T ss_dssp SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHH
T ss_pred CChhhHHHHHHhccccccCCCcccccHHHHHH
Confidence 99999999998754 6778766667776665
No 24
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.4e-40 Score=370.31 Aligned_cols=234 Identities=36% Similarity=0.675 Sum_probs=204.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+..|..+|..+ +||||++++++|.+.+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 35678999999999999999999999999999999999875443444566788899999988 89999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+|||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|.....
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999999764 3499999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.
T Consensus 174 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 174 ---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp ---------------------------TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ---------------------------CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 01123466899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 904 QKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
.+++++|..+.+.+|... +..+++
T Consensus 227 ~~~~~~i~~~~~~~p~~~--s~~~~~ 250 (353)
T 2i0e_A 227 DELFQSIMEHNVAYPKSM--SKEAVA 250 (353)
T ss_dssp HHHHHHHHHCCCCCCTTS--CHHHHH
T ss_pred HHHHHHHHhCCCCCCCCC--CHHHHH
Confidence 999999999999988753 444443
No 25
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.8e-40 Score=373.15 Aligned_cols=234 Identities=38% Similarity=0.718 Sum_probs=201.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++++.||+|+||+||+|+++.+++.||+|++++...........+.+|..+|.++ +||||++++++|.+.+.
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 35568999999999999999999999999999999999987655555666788999999887 89999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|||||||+||+|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999999875 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~-- 901 (934)
......+.+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 206 ---------------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~ 258 (396)
T 4dc2_A 206 ---------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258 (396)
T ss_dssp ---------------------------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC
T ss_pred ---------------------------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 112345678999999999999999999999999999999999999999642
Q ss_pred -------CHHHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 902 -------TRQKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 902 -------~~~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
....+++.|..+.+.+|... |..+++
T Consensus 259 ~~~~~~~~~~~~~~~i~~~~~~~p~~~--s~~~~~ 291 (396)
T 4dc2_A 259 SDNPDQNTEDYLFQVILEKQIRIPRSL--SVKAAS 291 (396)
T ss_dssp ------CCHHHHHHHHHHCCCCCCTTS--CHHHHH
T ss_pred ccccchhhHHHHHHHHhccccCCCCcC--CHHHHH
Confidence 34557888899999998753 444444
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-40 Score=364.69 Aligned_cols=199 Identities=25% Similarity=0.342 Sum_probs=161.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC----eE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----HV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----~~ 744 (934)
.+|.+.+.||+|+||+||++++ +|+.||||++.... ........|+.++..++|||||++++++..++ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4688999999999999999987 68999999987531 22222345666667889999999999998653 68
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEEecc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFD 816 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------giiHrDLKp~NILl~~~~~vkl~DFG 816 (934)
|||||||++|+|.+++... .+++..+..++.|++.||+|||++ |||||||||+|||++.++.+||+|||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999999764 489999999999999999999987 99999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC------CCCchhHHHHHHHHHHH
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYE 890 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~s~~~DiwSlG~iL~e 890 (934)
+|+....... .........+||+.|||||++.+. .++.++|||||||+|||
T Consensus 154 la~~~~~~~~-----------------------~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E 210 (303)
T 3hmm_A 154 LAVRHDSATD-----------------------TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp TCEEEETTTT-----------------------EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCC-----------------------ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence 9965421110 001122356899999999999765 35679999999999999
Q ss_pred HHhCCCCCC
Q 002342 891 MLYGYTPFR 899 (934)
Q Consensus 891 lltG~~Pf~ 899 (934)
|++|.+||.
T Consensus 211 l~tg~~~~~ 219 (303)
T 3hmm_A 211 IARRCSIGG 219 (303)
T ss_dssp HHHTBCBTT
T ss_pred HHHCCCCCC
Confidence 999987663
No 27
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.4e-39 Score=363.42 Aligned_cols=226 Identities=38% Similarity=0.733 Sum_probs=200.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..+++.+ +||||++++++|.+.+.+
T Consensus 6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 85 (345)
T 3a8x_A 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 85 (345)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence 4567999999999999999999999999999999999987666667778889999999988 899999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||++|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 86 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~- 162 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR- 162 (345)
T ss_dssp EEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC-
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC-
Confidence 9999999999999999764 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC----
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---- 900 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~---- 900 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||..
T Consensus 163 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 216 (345)
T 3a8x_A 163 --------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216 (345)
T ss_dssp --------------------------TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-
T ss_pred --------------------------CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccc
Confidence 11223456899999999999999999999999999999999999999975
Q ss_pred -----CCHHHHHHHHHcCCCCCCCC
Q 002342 901 -----KTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 901 -----~~~~~~~~~i~~~~~~~p~~ 920 (934)
.....+++.|..+.+.+|..
T Consensus 217 ~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 217 DNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp ------CHHHHHHHHHHCCCCCCTT
T ss_pred cccccccHHHHHHHHHcCCCCCCCC
Confidence 34456778888888888865
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.3e-39 Score=361.00 Aligned_cols=225 Identities=29% Similarity=0.536 Sum_probs=202.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||.||+|.+..+|+.||||++.+... .......+.+|+.+|+.++||||+++++++...+.+|
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 346799999999999999999999999999999999986533 4556677889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||++|++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-- 166 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-- 166 (328)
T ss_dssp EEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS--
T ss_pred EEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC--
Confidence 999999999999999765 3499999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s-~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......+||+.|+|||++.+..++ .++|||||||++|+|++|++||.+.+..
T Consensus 167 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 220 (328)
T 3fe3_A 167 --------------------------GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220 (328)
T ss_dssp --------------------------SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred --------------------------CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence 1123456899999999999988875 7999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSST 921 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~~ 921 (934)
++..++..+.+.+|...
T Consensus 221 ~~~~~i~~~~~~~p~~~ 237 (328)
T 3fe3_A 221 ELRERVLRGKYRIPFYM 237 (328)
T ss_dssp HHHHHHHHCCCCCCTTS
T ss_pred HHHHHHHhCCCCCCCCC
Confidence 99999999999888753
No 29
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.2e-40 Score=371.71 Aligned_cols=234 Identities=38% Similarity=0.699 Sum_probs=196.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+..|..+ ++.++||||++++++|.+.+.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 3556899999999999999999999999999999999988765555556667778777 577899999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+|||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999999764 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 192 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 192 ---------------------------HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp ---------------------------CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred ---------------------------CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 11234567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 904 QKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
.+++++|+.+.+.+|... +..+++
T Consensus 245 ~~~~~~i~~~~~~~~~~~--~~~~~~ 268 (373)
T 2r5t_A 245 AEMYDNILNKPLQLKPNI--TNSARH 268 (373)
T ss_dssp HHHHHHHHHSCCCCCSSS--CHHHHH
T ss_pred HHHHHHHHhcccCCCCCC--CHHHHH
Confidence 999999999988888643 444443
No 30
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-39 Score=366.58 Aligned_cols=223 Identities=39% Similarity=0.719 Sum_probs=202.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 44679999999999999999999999999999999998754434445677889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||++|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-- 193 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp EEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC--
Confidence 999999999999999865 3499999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 194 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 245 (350)
T 1rdq_E 194 ----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245 (350)
T ss_dssp ----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence 1235689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002342 906 TFANILHKDLKFPSS 920 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~ 920 (934)
++.+|..+.+.+|..
T Consensus 246 ~~~~i~~~~~~~p~~ 260 (350)
T 1rdq_E 246 IYEKIVSGKVRFPSH 260 (350)
T ss_dssp HHHHHHHCCCCCCTT
T ss_pred HHHHHHcCCCCCCCC
Confidence 999999999988865
No 31
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.7e-40 Score=378.53 Aligned_cols=240 Identities=35% Similarity=0.607 Sum_probs=204.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..+..++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|..++..++||||++++++|.+.+.
T Consensus 69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 148 (437)
T 4aw2_A 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN 148 (437)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence 34567899999999999999999999999999999999986433233333447889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|||||||+||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|.....
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 99999999999999999764 24599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
. ........+||+.|||||++. ...|+.++|||||||++|+|++|++||
T Consensus 228 ~--------------------------~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf 281 (437)
T 4aw2_A 228 D--------------------------GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281 (437)
T ss_dssp T--------------------------SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred C--------------------------CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCC
Confidence 1 011233468999999999997 567899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcC--CCCCCCC-CCCCcccCCC
Q 002342 899 RGKTRQKTFANILHK--DLKFPSS-TPSSCKAANV 930 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~--~~~~p~~-~~~s~~~k~l 930 (934)
.+.+..+++.+|+.. .+.+|.. ...|..+++|
T Consensus 282 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dL 316 (437)
T 4aw2_A 282 YAESLVETYGKIMNHKERFQFPTQVTDVSENAKDL 316 (437)
T ss_dssp CCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHH
T ss_pred CCCChhHHHHhhhhccccccCCcccccCCHHHHHH
Confidence 999999999999864 4677765 2355555554
No 32
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=373.67 Aligned_cols=240 Identities=33% Similarity=0.588 Sum_probs=202.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+.+|..+|..++||||++++++|.+.++
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 34567899999999999999999999999999999999986433333444567889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|||||||+||+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|.....
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 999999999999999997642 3599999999999999999999999999999999999999999999999999965321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-------CCCCCchhHHHHHHHHHHHHHhCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-------GAGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-------~~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
.. .......+||+.|+|||++. ...|+.++|||||||++|+|++|++
T Consensus 215 ~~--------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~ 268 (412)
T 2vd5_A 215 DG--------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268 (412)
T ss_dssp TS--------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred CC--------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence 10 11223568999999999997 4578999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCC--CCCCCC-CCCCcccCCC
Q 002342 897 PFRGKTRQKTFANILHKD--LKFPSS-TPSSCKAANV 930 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~--~~~p~~-~~~s~~~k~l 930 (934)
||.+.+..+++.+|.+.. +.+|.. ...|..+++|
T Consensus 269 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dl 305 (412)
T 2vd5_A 269 PFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDF 305 (412)
T ss_dssp TTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHH
Confidence 999999999999998643 556642 2345555544
No 33
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=365.71 Aligned_cols=230 Identities=35% Similarity=0.673 Sum_probs=200.7
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
.....+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||++++++|.+
T Consensus 7 ~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 86 (384)
T 4fr4_A 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD 86 (384)
T ss_dssp -CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred CCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 34556778999999999999999999999999999999999987544444556788899999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+.+|+|||||.||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 164 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence 99999999999999999999764 4599999999999999999999999999999999999999999999999999964
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---CCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|++|
T Consensus 165 ~~~----------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 165 LPR----------------------------ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp CCT----------------------------TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccC----------------------------CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCC
Confidence 321 122345689999999999964 4688999999999999999999999
Q ss_pred CCC---CCHHHHHHHHHcCCCCCCCC
Q 002342 898 FRG---KTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 898 f~~---~~~~~~~~~i~~~~~~~p~~ 920 (934)
|.+ .....++..+......+|..
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~p~~ 242 (384)
T 4fr4_A 217 YHIRSSTSSKEIVHTFETTVVTYPSA 242 (384)
T ss_dssp SCCCTTSCHHHHHHHHHHCCCCCCTT
T ss_pred CCCCCCccHHHHHHHHhhcccCCCCc
Confidence 974 44566777778888888765
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=360.48 Aligned_cols=224 Identities=31% Similarity=0.539 Sum_probs=192.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||+||+|.+..+|+.||||++.+.... .....+.+|+.+|+.++||||+++++++...+..|+|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 57899999999999999999999999999999999865432 2345688999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 87 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--- 161 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN--- 161 (347)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCC---
Confidence 9999999999999765 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........+||+.|+|||++.+..+ +.++|||||||+||+|++|.+||.+.+..+.
T Consensus 162 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 218 (347)
T 3zgw_A 162 -----------------------KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL 218 (347)
T ss_dssp ---------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -----------------------CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 0112245689999999999998876 8899999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCC
Q 002342 907 FANILHKDLKFPSST 921 (934)
Q Consensus 907 ~~~i~~~~~~~p~~~ 921 (934)
+.+|..+.+.+|.+.
T Consensus 219 ~~~i~~~~~~~p~~~ 233 (347)
T 3zgw_A 219 YKKIMRGKYDVPKWL 233 (347)
T ss_dssp HHHHHHTCCCCCTTC
T ss_pred HHHHHcCCCCCCCCC
Confidence 999999999988764
No 35
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-38 Score=359.63 Aligned_cols=233 Identities=29% Similarity=0.438 Sum_probs=202.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+.|++.+.||+|+||.||+|.++.+|+.||+|++.+...... .....+.+|+.+|+.++||||++++++|.+.+.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4689999999999999999999999999999999987543221 1346788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecccCcc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFG~a~~ 820 (934)
|+|||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999999764 4599999999999999999999999999999999999998776 799999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 169 ~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 169 IED----------------------------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCT----------------------------TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCC----------------------------CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 321 1122356799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 901 KTRQKTFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
.+..+.+..|..+.+.+|.. ...+..+++|
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 252 (361)
T 2yab_A 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDF 252 (361)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCchhccCCCHHHHHH
Confidence 99999999999998888742 3345555443
No 36
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.4e-38 Score=351.44 Aligned_cols=227 Identities=44% Similarity=0.778 Sum_probs=191.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
.+..++|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.++||||+++++++..
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 92 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT 92 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence 456689999999999999999999985 68999999999865322 22344567789999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+.+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 93 GGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999999764 4599999999999999999999999999999999999999999999999999853
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 171 ~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 171 SIH---------------------------DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -----------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccc---------------------------CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 211 01122356899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~~ 920 (934)
.+..+.+.+|..+.+.+|..
T Consensus 224 ~~~~~~~~~i~~~~~~~p~~ 243 (327)
T 3a62_A 224 ENRKKTIDKILKCKLNLPPY 243 (327)
T ss_dssp SSHHHHHHHHHHTCCCCCTT
T ss_pred CCHHHHHHHHHhCCCCCCCC
Confidence 99999999999998888864
No 37
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.4e-38 Score=354.25 Aligned_cols=231 Identities=28% Similarity=0.479 Sum_probs=201.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3679999999999999999999999999999999986533 345567788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~DFG~a~~~~~~ 824 (934)
||||.|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++......
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999998764 4599999999999999999999999999999999999997654 5999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 185 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~ 236 (362)
T 2bdw_A 185 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236 (362)
T ss_dssp ----------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 1123457999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC--CCCCcccCC
Q 002342 905 KTFANILHKDLKFPSS--TPSSCKAAN 929 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~--~~~s~~~k~ 929 (934)
+++..|..+.+.+|.. ...+..+++
T Consensus 237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~ 263 (362)
T 2bdw_A 237 RLYAQIKAGAYDYPSPEWDTVTPEAKS 263 (362)
T ss_dssp HHHHHHHHTCCCCCTTGGGGSCHHHHH
T ss_pred HHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 9999999998888763 233444443
No 38
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.1e-38 Score=372.68 Aligned_cols=235 Identities=31% Similarity=0.559 Sum_probs=203.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|.+++.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 45679999999999999999999999999999999998754444445567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 746 LITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999999987643 34699999999999999999999999999999999999999999999999999965321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~-- 901 (934)
. .......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.
T Consensus 342 ~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~ 394 (543)
T 3c4z_A 342 G---------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394 (543)
T ss_dssp T---------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC
T ss_pred C---------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc
Confidence 1 11223468999999999999999999999999999999999999999875
Q ss_pred --CHHHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 902 --TRQKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 902 --~~~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
...++.+.+..+...+|... +..+++
T Consensus 395 ~~~~~~~~~~i~~~~~~~p~~~--s~~~~~ 422 (543)
T 3c4z_A 395 KVENKELKQRVLEQAVTYPDKF--SPASKD 422 (543)
T ss_dssp CCCHHHHHHHHHHCCCCCCTTS--CHHHHH
T ss_pred chhHHHHHHHHhhcccCCCccc--CHHHHH
Confidence 45678888988888888643 444443
No 39
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=363.71 Aligned_cols=233 Identities=27% Similarity=0.451 Sum_probs=201.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+|+.++||||+++++++.+.+..|+|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4689999999999999999999999999999999987533 334456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~---~~~~vkl~DFG~a~~~~~~ 824 (934)
||||.||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999999999875 4599999999999999999999999999999999999998 4578999999999543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 167 ---------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~ 219 (444)
T 3soa_A 167 ---------------------------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219 (444)
T ss_dssp ---------------------------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ---------------------------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence 11223467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 905 KTFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
+++..+..+.+.+|.. ...+..+++|
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~s~~~~~l 247 (444)
T 3soa_A 220 RLYQQIKAGAYDFPSPEWDTVTPEAKDL 247 (444)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred HHHHHHHhCCCCCCccccccCCHHHHHH
Confidence 9999999998877754 3445555443
No 40
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-38 Score=368.97 Aligned_cols=229 Identities=40% Similarity=0.780 Sum_probs=193.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
..+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+|+.++||||++++++|...+.
T Consensus 143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222 (446)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE
T ss_pred cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE
Confidence 34566899999999999999999999999999999999987544455556677889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
+|||||||++++|.+++... +.+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|....
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999999764 459999999999999999999998 999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. ........+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+
T Consensus 301 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 301 K---------------------------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp C--------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C---------------------------CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 1 1112345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPSST 921 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~~ 921 (934)
...++..+..+.+.+|...
T Consensus 354 ~~~~~~~i~~~~~~~p~~~ 372 (446)
T 4ejn_A 354 HEKLFELILMEEIRFPRTL 372 (446)
T ss_dssp HHHHHHHHHHCCCCCCTTS
T ss_pred HHHHHHHHHhCCCCCCccC
Confidence 9999999999999888653
No 41
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.5e-38 Score=385.03 Aligned_cols=235 Identities=36% Similarity=0.676 Sum_probs=206.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~ 743 (934)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+...........+..|..+|..+ +||+|+.++++|.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 45678999999999999999999999999999999999875443444556788899999987 79999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+||||||++||+|..++... +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999999999875 3599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
......+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+.
T Consensus 495 ---------------------------~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~ 547 (674)
T 3pfq_A 495 ---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547 (674)
T ss_dssp ---------------------------TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ---------------------------CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH
Confidence 11223467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 904 QKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
.+++++|..+.+.+|... +..+++|
T Consensus 548 ~~~~~~i~~~~~~~p~~~--s~~~~~l 572 (674)
T 3pfq_A 548 DELFQSIMEHNVAYPKSM--SKEAVAI 572 (674)
T ss_dssp HHHHHHHHSSCCCCCTTS--CHHHHHH
T ss_pred HHHHHHHHhCCCCCCccC--CHHHHHH
Confidence 999999999999999753 5555443
No 42
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-37 Score=340.82 Aligned_cols=221 Identities=23% Similarity=0.356 Sum_probs=191.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++++.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 35789999999999999999999999999999999976655566677889999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 89 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-- 164 (294)
T ss_dssp EEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc--
Confidence 99999999999999765 35999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....
T Consensus 165 ------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~ 220 (294)
T 4eqm_A 165 ------------------------SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220 (294)
T ss_dssp ----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH
T ss_pred ------------------------cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 01122345799999999999999999999999999999999999999999988877
Q ss_pred HHHHHcCCC
Q 002342 907 FANILHKDL 915 (934)
Q Consensus 907 ~~~i~~~~~ 915 (934)
......+..
T Consensus 221 ~~~~~~~~~ 229 (294)
T 4eqm_A 221 AIKHIQDSV 229 (294)
T ss_dssp HHHHHSSCC
T ss_pred HHHHhhccC
Confidence 666665543
No 43
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.6e-38 Score=342.96 Aligned_cols=212 Identities=25% Similarity=0.432 Sum_probs=188.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||++++++|...+..|+|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 4689999999999999999999999999999999875432 2345678999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||+|++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 169 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 169 (297)
T ss_dssp EECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred EECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc---
Confidence 9999999999999764 4999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+
T Consensus 170 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 225 (297)
T 3fxz_A 170 ------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (297)
T ss_dssp ------------------------TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11223557999999999999999999999999999999999999999998887777
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..+..
T Consensus 226 ~~~~~ 230 (297)
T 3fxz_A 226 YLIAT 230 (297)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 44
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.7e-38 Score=371.30 Aligned_cols=236 Identities=32% Similarity=0.560 Sum_probs=203.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+|+.++||||++++++|.+.+.+
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence 35667899999999999999999999999999999999875443444456688999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999999998765556999999999999999999999999999999999999999999999999999543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~--- 901 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 340 ----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~ 391 (576)
T 2acx_A 340 ----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391 (576)
T ss_dssp ----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC
T ss_pred ----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc
Confidence 1123458999999999999999999999999999999999999999875
Q ss_pred -CHHHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 902 -TRQKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 902 -~~~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
....+...+......+|.. .|..+++|
T Consensus 392 ~~~~~i~~~i~~~~~~~p~~--~s~~~~dL 419 (576)
T 2acx_A 392 IKREEVERLVKEVPEEYSER--FSPQARSL 419 (576)
T ss_dssp CCHHHHHHHHHHCCCCCCTT--SCHHHHHH
T ss_pred hhHHHHHHHhhcccccCCcc--CCHHHHHH
Confidence 3466777888877777754 34444443
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=343.69 Aligned_cols=219 Identities=25% Similarity=0.397 Sum_probs=196.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+|+.++||||+++++++.+.+.+|+|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 47899999999999999999999999999999998743 23445688999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCcEEEEecccCcccCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~--~~~vkl~DFG~a~~~~~~~ 825 (934)
||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~-- 156 (321)
T 1tki_A 80 FEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-- 156 (321)
T ss_dssp ECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--
T ss_pred EEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC--
Confidence 99999999999997642 45999999999999999999999999999999999999987 78999999999854321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 210 (321)
T 1tki_A 157 --------------------------GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210 (321)
T ss_dssp --------------------------TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred --------------------------CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 111234579999999999999889999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCC
Q 002342 906 TFANILHKDLKFPS 919 (934)
Q Consensus 906 ~~~~i~~~~~~~p~ 919 (934)
++..+..+.+.+|.
T Consensus 211 ~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 211 IIENIMNAEYTFDE 224 (321)
T ss_dssp HHHHHHHTCCCCCH
T ss_pred HHHHHHcCCCCCCh
Confidence 99999999888774
No 46
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=341.33 Aligned_cols=236 Identities=29% Similarity=0.513 Sum_probs=194.7
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC-----------------------hHHHHHHHHHH
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAER 720 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~-----------------------~~~~~~~~~E~ 720 (934)
..+..++|++.+.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 8 DCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp --CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred CceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence 3455789999999999999999999999999999999997653211 12235688999
Q ss_pred HHHHhCCCCCccceeEEEEe--CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 002342 721 EILDMLDHPFVPALYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 798 (934)
Q Consensus 721 ~il~~l~hp~Iv~l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLK 798 (934)
.+|+.++||||+++++++.+ ...+|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 164 (298)
T 2zv2_A 88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK 164 (298)
T ss_dssp HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 99999999999999999986 6789999999999999987643 459999999999999999999999999999999
Q ss_pred CCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC---C
Q 002342 799 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---H 875 (934)
Q Consensus 799 p~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~ 875 (934)
|+|||++.++.+||+|||++...... .......+||+.|+|||++.+.. +
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 217 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGS---------------------------DALLSNTVGTPAFMAPESLSETRKIFS 217 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSS---------------------------SCEECCCCSCGGGCCGGGCCTTCCCEE
T ss_pred HHHEEECCCCCEEEecCCCccccccc---------------------------cccccCCcCCccccChhhhccCCCCCC
Confidence 99999999999999999998653211 01123457999999999998765 3
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCcccCC
Q 002342 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPSSCKAAN 929 (934)
Q Consensus 876 s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~k~ 929 (934)
+.++|||||||++|+|++|++||.+.........+..+.+.+|.....+..+++
T Consensus 218 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (298)
T 2zv2_A 218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD 271 (298)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHH
T ss_pred CchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHH
Confidence 678999999999999999999999999888888998888888876555555443
No 47
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-38 Score=353.94 Aligned_cols=222 Identities=32% Similarity=0.503 Sum_probs=192.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+..|+|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 57899999999999999999999999999999999765333333345788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+ +|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~---- 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---- 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT----
T ss_pred EECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC----
Confidence 9999 88999988764 4599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+......
T Consensus 161 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~ 216 (336)
T 3h4j_B 161 ------------------------GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216 (336)
T ss_dssp ------------------------SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC
T ss_pred ------------------------CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH
Confidence 112235579999999999988876 6799999999999999999999998877777
Q ss_pred HHHHHcCCCCCCCC
Q 002342 907 FANILHKDLKFPSS 920 (934)
Q Consensus 907 ~~~i~~~~~~~p~~ 920 (934)
++.+..+.+.+|..
T Consensus 217 ~~~i~~~~~~~p~~ 230 (336)
T 3h4j_B 217 FKKVNSCVYVMPDF 230 (336)
T ss_dssp BCCCCSSCCCCCTT
T ss_pred HHHHHcCCCCCccc
Confidence 66666666666654
No 48
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=340.51 Aligned_cols=222 Identities=29% Similarity=0.460 Sum_probs=196.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+|+.++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3579999999999999999999999999999999986533211 1356788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecccCcc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFG~a~~ 820 (934)
|+|||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999999764 4599999999999999999999999999999999999998877 899999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 168 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 168 IDFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp CCTT----------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCC----------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 3211 112345799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~ 919 (934)
.+..+.+..+....+.+|.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~ 238 (326)
T 2y0a_A 220 DTKQETLANVSAVNYEFED 238 (326)
T ss_dssp SSHHHHHHHHHHTCCCCCH
T ss_pred CCHHHHHHHHHhcCCCcCc
Confidence 9999999999888777764
No 49
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-37 Score=362.24 Aligned_cols=227 Identities=28% Similarity=0.468 Sum_probs=201.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|.+.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+|+.++||||+++++++...+.+
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 34568999999999999999999999999999999999865433334456788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~- 168 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD- 168 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT-
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc-
Confidence 9999999999999999764 4599999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.
T Consensus 169 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~ 221 (476)
T 2y94_A 169 ---------------------------GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221 (476)
T ss_dssp ---------------------------TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS
T ss_pred ---------------------------cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH
Confidence 011235589999999999998776 6799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 002342 904 QKTFANILHKDLKFPSST 921 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~~ 921 (934)
...+.+|..+.+.+|...
T Consensus 222 ~~~~~~i~~~~~~~p~~~ 239 (476)
T 2y94_A 222 PTLFKKICDGIFYTPQYL 239 (476)
T ss_dssp HHHHHHHHTTCCCCCTTC
T ss_pred HHHHHHHhcCCcCCCccC
Confidence 999999999988887653
No 50
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-37 Score=341.43 Aligned_cols=225 Identities=24% Similarity=0.367 Sum_probs=189.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC----e
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----H 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----~ 743 (934)
.++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 578999999999999999999999999999999998765556666778899999999999999999999987643 4
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 59999999999999999764 3599999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
... ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 169 ~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 224 (311)
T 3ork_A 169 SGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224 (311)
T ss_dssp -------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccc------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 110 11123345799999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHcCCCCCC
Q 002342 904 QKTFANILHKDLKFP 918 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p 918 (934)
......+..+....|
T Consensus 225 ~~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 225 VSVAYQHVREDPIPP 239 (311)
T ss_dssp HHHHHHHHHCCCCCH
T ss_pred HHHHHHHhcCCCCCc
Confidence 888777776654443
No 51
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.7e-37 Score=345.32 Aligned_cols=231 Identities=29% Similarity=0.441 Sum_probs=188.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||.||++++..+++.||||++.+... ....+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 456799999999999999999999999999999999976432 2245778999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEEecccCcccCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTSC 823 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~--vkl~DFG~a~~~~~ 823 (934)
+|||||++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999998764 34999999999999999999999999999999999999987665 99999999853210
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCch-hHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~-~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.......+||+.|+|||++.+..++.+ +|||||||++|+|++|++||.+..
T Consensus 171 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 ----------------------------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp --------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred ----------------------------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 111234579999999999998888765 899999999999999999998744
Q ss_pred H----HHHHHHHHcCCCCCCCCCCCCcccCCC
Q 002342 903 R----QKTFANILHKDLKFPSSTPSSCKAANV 930 (934)
Q Consensus 903 ~----~~~~~~i~~~~~~~p~~~~~s~~~k~l 930 (934)
. ...++.+....+.+|.....+..+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 254 (361)
T 3uc3_A 223 EPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254 (361)
T ss_dssp -CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHH
Confidence 3 566777888888888776566555543
No 52
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.6e-37 Score=342.58 Aligned_cols=223 Identities=27% Similarity=0.435 Sum_probs=185.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999875422 22335678999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999999999764 459999999999999999999999999999999999999999999999999986432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHH-H
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~-~ 905 (934)
........+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.... .
T Consensus 160 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 216 (323)
T 3tki_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (323)
T ss_dssp -----------------------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH
T ss_pred -----------------------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 1112335689999999999988776 67899999999999999999999876554 3
Q ss_pred HHHHHHcCCCCCCC
Q 002342 906 TFANILHKDLKFPS 919 (934)
Q Consensus 906 ~~~~i~~~~~~~p~ 919 (934)
.+..+.......+.
T Consensus 217 ~~~~~~~~~~~~~~ 230 (323)
T 3tki_A 217 EYSDWKEKKTYLNP 230 (323)
T ss_dssp HHHHHHTTCTTSTT
T ss_pred HHHHHhcccccCCc
Confidence 34444444444443
No 53
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.7e-37 Score=343.98 Aligned_cols=223 Identities=25% Similarity=0.430 Sum_probs=190.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC--hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
.+.|++.+.||+|+||.||+|.++.+++.||||++.+..... ......+.+|+.+++.++||||+++++++...+.+|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 468999999999999999999999999999999987532211 113467889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEecccCcc
Q 002342 746 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCL 820 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~a~~ 820 (934)
+|||||+|++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++..
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999998887643 2345899999999999999999999999999999999999986654 99999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 183 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 183 LGES---------------------------GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CCTT---------------------------SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ecCC---------------------------CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 3211 1112345799999999999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHcCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFP 918 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p 918 (934)
. ....+..+..+.+.++
T Consensus 236 ~-~~~~~~~i~~~~~~~~ 252 (351)
T 3c0i_A 236 T-KERLFEGIIKGKYKMN 252 (351)
T ss_dssp S-HHHHHHHHHHTCCCCC
T ss_pred c-HHHHHHHHHcCCCCCC
Confidence 4 5667888888877665
No 54
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.1e-37 Score=331.86 Aligned_cols=226 Identities=35% Similarity=0.568 Sum_probs=198.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||++.+..++..||+|++.+...........+.+|+.+++.++||||+++++++.+.+..
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 34568999999999999999999999999999999999765433334456788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 9999999999999998764 3499999999999999999999999999999999999999999999999998843211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 162 ----------------------------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSST 921 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~~ 921 (934)
+.+..+....+.+|...
T Consensus 214 ~~~~~~~~~~~~~~~~~ 230 (279)
T 3fdn_A 214 ETYKRISRVEFTFPDFV 230 (279)
T ss_dssp HHHHHHHHTCCCCCTTS
T ss_pred HHHHHHHhCCCCCCCcC
Confidence 99999999888888653
No 55
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-36 Score=328.74 Aligned_cols=224 Identities=30% Similarity=0.517 Sum_probs=177.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999987655455556778899999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 91 v~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp EEECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred Eehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc--
Confidence 99999 88888888664 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+...
T Consensus 166 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 219 (275)
T 2eue_A 166 --------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219 (275)
T ss_dssp -----------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11234469999999999988766 689999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCC
Q 002342 906 TFANILHKDLKFPSST 921 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~~ 921 (934)
....+..+...+|...
T Consensus 220 ~~~~~~~~~~~~~~~~ 235 (275)
T 2eue_A 220 LFKNISNGVYTLPKFL 235 (275)
T ss_dssp HHHHHHHTCCCCCTTS
T ss_pred HHHHHHhCCCCCCccC
Confidence 9999999988888653
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.4e-37 Score=337.07 Aligned_cols=222 Identities=25% Similarity=0.405 Sum_probs=185.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
...+..++|++.+.||+|+||.||++.+ ++..||+|++.+.. ........+.+|+.+|+.++||||+++++++...+
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCC-CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 3456678999999999999999999987 68899999987653 24555678899999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999999976421 23899999999999999999999999 9999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.... ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 188 ~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 188 LKAS---------------------------TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp -----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred cccc---------------------------cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4211 0112234579999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCC
Q 002342 900 GKTRQKTFANILHKD 914 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~ 914 (934)
+.+..+....+....
T Consensus 241 ~~~~~~~~~~~~~~~ 255 (309)
T 3p86_A 241 NLNPAQVVAAVGFKC 255 (309)
T ss_dssp TSCHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHhcC
Confidence 999988888775433
No 57
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-36 Score=344.01 Aligned_cols=221 Identities=28% Similarity=0.434 Sum_probs=195.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++++.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+|+.++||||+++++++.+...+|+|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987642 33445788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCcEEEEecccCcccCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~--~~~vkl~DFG~a~~~~~~~ 825 (934)
||||.|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 127 ~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp EECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred EEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 9999999999998764 245999999999999999999999999999999999999974 478999999998653211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 205 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 257 (387)
T 1kob_A 205 ---------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257 (387)
T ss_dssp ---------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence 11223479999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002342 906 TFANILHKDLKFPSS 920 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~ 920 (934)
.+..+..+...++..
T Consensus 258 ~~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 258 TLQNVKRCDWEFDED 272 (387)
T ss_dssp HHHHHHHCCCCCCSS
T ss_pred HHHHHHhCCCCCCcc
Confidence 999999888776643
No 58
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=340.59 Aligned_cols=223 Identities=25% Similarity=0.347 Sum_probs=190.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
..+..++|++.+.||+|+||.||++.+..++ ..||||++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3466789999999999999999999997554 469999997542 34556778999999999999999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred CCccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999999999654 34599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 201 ~~~~~~~------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 256 (325)
T 3kul_A 201 LEDDPDA------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256 (325)
T ss_dssp CC----C------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccCccc------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 4321110 011223356889999999999999999999999999999998 999999
Q ss_pred CCCHHHHHHHHHcC
Q 002342 900 GKTRQKTFANILHK 913 (934)
Q Consensus 900 ~~~~~~~~~~i~~~ 913 (934)
+.+..+.+..+..+
T Consensus 257 ~~~~~~~~~~~~~~ 270 (325)
T 3kul_A 257 NMTNRDVISSVEEG 270 (325)
T ss_dssp TSCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcC
Confidence 99999999888776
No 59
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.8e-36 Score=340.22 Aligned_cols=218 Identities=27% Similarity=0.444 Sum_probs=193.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-----CCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----HPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-----hp~Iv~l~~~~~~ 740 (934)
+..++|++++.||+|+||.||+|.+..+++.||||++... .........|+.+++.+. ||||+++++++..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 4468999999999999999999999999999999998742 344566778999999996 9999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--------------
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------------- 806 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-------------- 806 (934)
.+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence 99999999999 999999998776566999999999999999999999999999999999999975
Q ss_pred -----------CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC
Q 002342 807 -----------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 875 (934)
Q Consensus 807 -----------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~ 875 (934)
++.+||+|||++..... .....+||+.|+|||++.+..+
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSD------------------------------YHGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTS------------------------------CCCSCCSCGGGCCHHHHTTCCC
T ss_pred ccccccccccCCCCEEEEeccCceecCC------------------------------CCcCccCcccccCcHHHcCCCC
Confidence 78999999999854211 1234579999999999999999
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 876 s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
+.++|||||||++|+|++|++||.+.+..+.+..+......+|
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p 279 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIP 279 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCC
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999888888876555554
No 60
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.3e-37 Score=349.39 Aligned_cols=227 Identities=24% Similarity=0.413 Sum_probs=183.6
Q ss_pred cCCcccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhCCCCCccceeEEEEe----C
Q 002342 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (934)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~Iv~l~~~~~~----~ 741 (934)
.++|.+. +.||+|+||+||++.+..+++.||||++... ..+.+|+.++ +..+||||++++++|.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 4678887 6899999999999999999999999998642 3466788887 45589999999999876 6
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a 818 (934)
.++|||||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 78999999999999999998765567999999999999999999999999999999999999987 789999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
..... .......+||+.|+|||++.+..++.++|||||||+||+|++|.+||
T Consensus 212 ~~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 263 (400)
T 1nxk_A 212 KETTS----------------------------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_dssp EECC---------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCC----------------------------CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 54321 11123568999999999999999999999999999999999999999
Q ss_pred CCCCHH----HHHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 899 RGKTRQ----KTFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 899 ~~~~~~----~~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
.+.+.. .+...+..+.+.+|.. ...+..+++|
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 301 (400)
T 1nxk_A 264 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 301 (400)
T ss_dssp CCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred CCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHH
Confidence 876543 2567777888777653 3344444443
No 61
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.4e-37 Score=345.49 Aligned_cols=227 Identities=28% Similarity=0.438 Sum_probs=192.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~l 746 (934)
.++|++.+.||+|+||.||+|.++.+++.||||++.+... ...+|++++..+ +||||++++++|.+.+.+|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4689999999999999999999999999999999986532 234688888887 79999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEEecccCcccC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 822 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~----~~vkl~DFG~a~~~~ 822 (934)
|||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+... +.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999999765 459999999999999999999999999999999999998543 359999999986432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC--
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-- 900 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~-- 900 (934)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 172 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 224 (342)
T 2qr7_A 172 AE---------------------------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224 (342)
T ss_dssp CT---------------------------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST
T ss_pred CC---------------------------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC
Confidence 11 1123356899999999999988889999999999999999999999986
Q ss_pred -CCHHHHHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 901 -KTRQKTFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 901 -~~~~~~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
.+..+++..|..+.+.++.. ...|..+++|
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 257 (342)
T 2qr7_A 225 DDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257 (342)
T ss_dssp TSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHH
T ss_pred cCCHHHHHHHHccCCcccCccccccCCHHHHHH
Confidence 56678899999999887753 3345555443
No 62
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2e-36 Score=345.41 Aligned_cols=228 Identities=19% Similarity=0.312 Sum_probs=192.2
Q ss_pred ccCCcccccccccC--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 667 NLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G--~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
..++|++++.||+| +||.||++++..+++.||||++..... .......+.+|+.+|+.++||||++++++|.+.+.+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 46789999999999 999999999999999999999986532 445667788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999999998765566999999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
... ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 182 ~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 182 GQR--------------------QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp TEE--------------------CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccc--------------------ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 000 0000112234579999999999987 678999999999999999999999999988
Q ss_pred HHHHHHHHHcCCC
Q 002342 903 RQKTFANILHKDL 915 (934)
Q Consensus 903 ~~~~~~~i~~~~~ 915 (934)
..+.+..+..+.+
T Consensus 242 ~~~~~~~~~~~~~ 254 (389)
T 3gni_B 242 ATQMLLEKLNGTV 254 (389)
T ss_dssp STTHHHHC-----
T ss_pred HHHHHHHHhcCCC
Confidence 7777766665543
No 63
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.5e-36 Score=328.96 Aligned_cols=224 Identities=31% Similarity=0.557 Sum_probs=199.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+..|
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 45679999999999999999999999999999999997643323333467889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~-- 166 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-- 166 (284)
T ss_dssp EEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS--
T ss_pred EEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc--
Confidence 999999999999999765 3499999999999999999999999999999999999999999999999999844211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+|++.|+|||++.+..++.++||||||+++|+|++|..||.+.+..+
T Consensus 167 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 219 (284)
T 2vgo_A 167 ---------------------------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219 (284)
T ss_dssp ---------------------------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH
Confidence 11234579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC
Q 002342 906 TFANILHKDLKFPSS 920 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~ 920 (934)
....+....+.+|..
T Consensus 220 ~~~~~~~~~~~~~~~ 234 (284)
T 2vgo_A 220 THRRIVNVDLKFPPF 234 (284)
T ss_dssp HHHHHHTTCCCCCTT
T ss_pred HHHHHhccccCCCCc
Confidence 999999988888764
No 64
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.6e-36 Score=340.14 Aligned_cols=223 Identities=22% Similarity=0.336 Sum_probs=192.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-------cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 736 (934)
.+..++|++.+.||+|+||.||+|++. .++..||+|++... ........+.+|+.+|+.+ +||||+++++
T Consensus 77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 154 (370)
T 2psq_A 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLG 154 (370)
T ss_dssp BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT--CBHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC--cCHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 455689999999999999999999985 34568999999764 2445567889999999999 8999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
++...+.+|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 234 (370)
T 2psq_A 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234 (370)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence 9999999999999999999999997643 23589999999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
|++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 289 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCT-------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred EECCCCCEEEccccCCcccCcccc-------------------------eecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence 999999999999999964321110 1122344678999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
||||++|+|++ |.+||.+....+++..+..+.
T Consensus 290 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 322 (370)
T 2psq_A 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 322 (370)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 99999999998 999999999988888887765
No 65
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.4e-36 Score=326.04 Aligned_cols=225 Identities=27% Similarity=0.479 Sum_probs=201.3
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 35789999999999999999999999999999999987655566677788999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-- 168 (294)
T ss_dssp EEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST--
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC--
Confidence 99999999999998764 35999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........||+.|+|||++.+..++.++||||||+++|+|++|+.||.+....+.
T Consensus 169 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 223 (294)
T 2rku_A 169 -------------------------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223 (294)
T ss_dssp -------------------------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred -------------------------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 1112345799999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCC
Q 002342 907 FANILHKDLKFPSS 920 (934)
Q Consensus 907 ~~~i~~~~~~~p~~ 920 (934)
+..+..+.+.+|..
T Consensus 224 ~~~~~~~~~~~~~~ 237 (294)
T 2rku_A 224 YLRIKKNEYSIPKH 237 (294)
T ss_dssp HHHHHTTCCCCCTT
T ss_pred HHHHhhccCCCccc
Confidence 98898888877764
No 66
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.2e-37 Score=360.00 Aligned_cols=233 Identities=29% Similarity=0.457 Sum_probs=202.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+|+.++||||+++++++...+.+|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 34689999999999999999999999999999999987655445556788999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~ 823 (934)
|||||.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 104 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp EECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999998764 459999999999999999999999999999999999999 4678999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.
T Consensus 182 ~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 232 (484)
T 3nyv_A 182 S----------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 232 (484)
T ss_dssp C----------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH
Confidence 1 11234579999999999977 689999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCC--CCCCCcccCCC
Q 002342 904 QKTFANILHKDLKFPS--STPSSCKAANV 930 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~--~~~~s~~~k~l 930 (934)
.+++..+..+.+.++. +...|..+++|
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 261 (484)
T 3nyv_A 233 YDILKKVEKGKYTFELPQWKKVSESAKDL 261 (484)
T ss_dssp HHHHHHHHHCCCCCCSGGGGGSCHHHHHH
T ss_pred HHHHHHHHcCCCCCCCcccccCCHHHHHH
Confidence 9999999998876653 33445554443
No 67
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-36 Score=343.02 Aligned_cols=239 Identities=27% Similarity=0.431 Sum_probs=181.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCC--eE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT--HV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~--~~ 744 (934)
.++|++++.||+|+||.||+|.+..+++.||||.+.+. .........+.+|+.+|+.+. ||||+++++++...+ .+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 57899999999999999999999999999999998754 334556677889999999997 999999999997544 79
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+ ++|..++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99999995 689998876 35999999999999999999999999999999999999999999999999999765321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
......... ...................+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 163 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 163 RRVTNNIPL------SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCCCGGG------CCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccc------cccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 111000000 000000001111233456689999999999987 6789999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCC
Q 002342 904 QKTFANILHKDLKFP 918 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p 918 (934)
.+.+.+|.. .+.+|
T Consensus 237 ~~~~~~i~~-~~~~p 250 (388)
T 3oz6_A 237 MNQLERIIG-VIDFP 250 (388)
T ss_dssp HHHHHHHHH-HHCCC
T ss_pred HHHHHHHHH-hcCCC
Confidence 999888873 33444
No 68
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.4e-36 Score=333.69 Aligned_cols=225 Identities=27% Similarity=0.479 Sum_probs=201.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 35789999999999999999999999999999999987655566677888999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-- 194 (335)
T ss_dssp EECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST--
T ss_pred EEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC--
Confidence 99999999999998764 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....+.
T Consensus 195 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 249 (335)
T 2owb_A 195 -------------------------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249 (335)
T ss_dssp -------------------------TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred -------------------------cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence 1112345799999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCC
Q 002342 907 FANILHKDLKFPSS 920 (934)
Q Consensus 907 ~~~i~~~~~~~p~~ 920 (934)
+..+..+.+.+|..
T Consensus 250 ~~~~~~~~~~~~~~ 263 (335)
T 2owb_A 250 YLRIKKNEYSIPKH 263 (335)
T ss_dssp HHHHHHTCCCCCTT
T ss_pred HHHHhcCCCCCCcc
Confidence 88888888877764
No 69
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-35 Score=323.38 Aligned_cols=222 Identities=29% Similarity=0.498 Sum_probs=197.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4789999999999999999999999999999999976533 445567788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~a~~~~~~ 824 (934)
|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++. +||+|||++......
T Consensus 84 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999988765 45999999999999999999999999999999999999986655 999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 213 (284)
T 3kk8_A 162 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213 (284)
T ss_dssp ----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh
Confidence 1123457999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSS 920 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~ 920 (934)
.....+..+.+.+|..
T Consensus 214 ~~~~~~~~~~~~~~~~ 229 (284)
T 3kk8_A 214 RLYAQIKAGAYDYPSP 229 (284)
T ss_dssp HHHHHHHHTCCCCCTT
T ss_pred HHHHHHHhccccCCch
Confidence 9999999988877754
No 70
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.3e-36 Score=350.23 Aligned_cols=211 Identities=25% Similarity=0.453 Sum_probs=181.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.+. .........+.+|+.+|+.++||||++++++|...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 57899999999999999999999999999999999864 33455667888999999999999999999999654
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|||||||+ ++|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 140 ~~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 140 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp CEEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CeEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 46799999995 557666643 3899999999999999999999999999999999999999999999999999543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. .......+||+.|+|||++.+..|+.++|||||||+||+|++|++||.+.
T Consensus 215 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 215 GT----------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp ------------------------------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC----------------------------CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 21 11234568999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+..+++.+|.+
T Consensus 267 ~~~~~~~~i~~ 277 (464)
T 3ttj_A 267 DYIDQWNKVIE 277 (464)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99888888765
No 71
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=341.22 Aligned_cols=218 Identities=27% Similarity=0.455 Sum_probs=186.0
Q ss_pred Cccc--ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 670 HFRP--IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 670 ~y~i--~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.|.+ .+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+|+.++||||+++++++...+.+|||
T Consensus 88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 164 (373)
T 2x4f_A 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLV 164 (373)
T ss_dssp TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 4444 67899999999999999999999999999764 234556788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE--ecCCcEEEEecccCcccCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl--~~~~~vkl~DFG~a~~~~~~~ 825 (934)
||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 165 ~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~- 242 (373)
T 2x4f_A 165 MEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR- 242 (373)
T ss_dssp EECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT-
T ss_pred EeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc-
Confidence 9999999999988654 2459999999999999999999999999999999999999 45678999999998653211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus 243 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 295 (373)
T 2x4f_A 243 ---------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE 295 (373)
T ss_dssp ---------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11234479999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCC
Q 002342 906 TFANILHKDLKFPS 919 (934)
Q Consensus 906 ~~~~i~~~~~~~p~ 919 (934)
.+..|..+...++.
T Consensus 296 ~~~~i~~~~~~~~~ 309 (373)
T 2x4f_A 296 TLNNILACRWDLED 309 (373)
T ss_dssp HHHHHHHTCCCSCS
T ss_pred HHHHHHhccCCCCh
Confidence 99999988776664
No 72
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.6e-36 Score=335.89 Aligned_cols=215 Identities=27% Similarity=0.418 Sum_probs=188.8
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
+.|.+++.||+|+||.||+|.+..+++.||||++.............+.+|+.+|+.++||||+++++++...+..|+||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 46999999999999999999999999999999998654444556678899999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||+. |+|.+++... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~------ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 205 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS------
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC------
Confidence 9995 6888887543 2459999999999999999999999999999999999999999999999999985431
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.....+||+.|+|||++. ...++.++|||||||++|+|++|++||.+.+...
T Consensus 206 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 206 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp -------------------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred -------------------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112457999999999995 5678899999999999999999999999998888
Q ss_pred HHHHHHcCCCC
Q 002342 906 TFANILHKDLK 916 (934)
Q Consensus 906 ~~~~i~~~~~~ 916 (934)
.+..+..+..+
T Consensus 261 ~~~~~~~~~~~ 271 (348)
T 1u5q_A 261 ALYHIAQNESP 271 (348)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHHhcCCC
Confidence 88777776543
No 73
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.4e-36 Score=327.19 Aligned_cols=214 Identities=22% Similarity=0.401 Sum_probs=183.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||+||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 68999999999999999999999999999999998653 23445567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
|||+ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 81 EFCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred ecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 9995 4666666543 245999999999999999999999999999999999999999999999999999653211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHhCCCC-CCCCCHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKT 906 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~elltG~~P-f~~~~~~~~ 906 (934)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.
T Consensus 155 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~ 211 (292)
T 3o0g_A 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp -----------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred -----------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence 11223457899999999998765 79999999999999999976665 677777777
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+..+..
T Consensus 212 ~~~i~~ 217 (292)
T 3o0g_A 212 LKRIFR 217 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777754
No 74
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=338.53 Aligned_cols=218 Identities=31% Similarity=0.490 Sum_probs=177.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..+.|++.+.||+|+||.||+|.+..+++.||||++.+.. ....+.+|+.+|+.++||||+++++++...+..|+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3478999999999999999999999999999999987542 23567789999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a~~~~~ 823 (934)
||||+++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 126 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp EECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999998764 45999999999999999999999999999999999999975 88999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 204 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 255 (349)
T 2w4o_A 204 ----------------------------QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255 (349)
T ss_dssp -------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred ----------------------------ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 0112345799999999999999999999999999999999999999987665
Q ss_pred HH-HHHHHHcCCCCCCC
Q 002342 904 QK-TFANILHKDLKFPS 919 (934)
Q Consensus 904 ~~-~~~~i~~~~~~~p~ 919 (934)
.. ++..+..+.+.++.
T Consensus 256 ~~~~~~~i~~~~~~~~~ 272 (349)
T 2w4o_A 256 DQFMFRRILNCEYYFIS 272 (349)
T ss_dssp HHHHHHHHHTTCCCCCT
T ss_pred cHHHHHHHHhCCCccCC
Confidence 54 77888887776654
No 75
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.1e-36 Score=334.92 Aligned_cols=224 Identities=24% Similarity=0.334 Sum_probs=187.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+..++|++.+.||+|+||.||++.+..+++.||||++..... ...+.+|+.+++.+ +||||+++++++...+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 80 (330)
T 2izr_A 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN 80 (330)
T ss_dssp EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence 445789999999999999999999999999999999875421 23577899999999 999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-----EEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~-----vkl~DFG~a~ 819 (934)
|+||||+ +++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++. +||+|||++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 9999999 99999999864 346999999999999999999999999999999999999998887 9999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
........ ...+.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.
T Consensus 159 ~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~ 218 (330)
T 2izr_A 159 EYIDPETK--------------------KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218 (330)
T ss_dssp ESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred eeecCCCC--------------------ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence 54321110 0011223456789999999999999999999999999999999999999998
Q ss_pred C---CCHHHHHHHHHcCCCC
Q 002342 900 G---KTRQKTFANILHKDLK 916 (934)
Q Consensus 900 ~---~~~~~~~~~i~~~~~~ 916 (934)
+ ....+.+..+......
T Consensus 219 ~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 219 GLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp TCCCSSHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHhhhcc
Confidence 7 3444556666544433
No 76
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.8e-36 Score=330.89 Aligned_cols=222 Identities=30% Similarity=0.449 Sum_probs=196.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4679999999999999999999999999999999986533221 1356788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecccCcc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFG~a~~ 820 (934)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999999764 4599999999999999999999999999999999999999887 799999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCcc----------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 3211 112345699999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~ 919 (934)
.+..+.+..+..+.+.+|.
T Consensus 221 ~~~~~~~~~i~~~~~~~~~ 239 (321)
T 2a2a_A 221 DTKQETLANITSVSYDFDE 239 (321)
T ss_dssp SSHHHHHHHHHTTCCCCCH
T ss_pred CCHHHHHHHHHhcccccCh
Confidence 9999999999888777664
No 77
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.4e-36 Score=332.80 Aligned_cols=215 Identities=25% Similarity=0.426 Sum_probs=172.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+|+.++||||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 468999999999999999999999999999999997543 222335678899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 748 TDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
|||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 99996 6999888643 123589999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. .......+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 161 ~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 161 P---------------------------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp C---------------------------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C---------------------------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 111234578999999999986 468999999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 002342 903 RQKTFANILH 912 (934)
Q Consensus 903 ~~~~~~~i~~ 912 (934)
..+.+..|.+
T Consensus 214 ~~~~~~~i~~ 223 (317)
T 2pmi_A 214 DEEQLKLIFD 223 (317)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9888887765
No 78
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.1e-36 Score=330.82 Aligned_cols=217 Identities=24% Similarity=0.426 Sum_probs=182.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
+...++|++++.||+|+||.||+|.+ .+++.||+|++.... ........+.+|+.+|+.++||||+++++++.+++..
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEE-TTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEE-CCCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 34468999999999999999999998 458999999987542 2333456788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+|||||+ ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99999995 58888876543 45999999999999999999999999999999999999999999999999999653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 173 ---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 173 ---------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp ---------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred ---------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 112234578999999999976 5689999999999999999999999999888
Q ss_pred HHHHHHHHc
Q 002342 904 QKTFANILH 912 (934)
Q Consensus 904 ~~~~~~i~~ 912 (934)
.+.+..+..
T Consensus 226 ~~~~~~i~~ 234 (311)
T 3niz_A 226 DDQLPKIFS 234 (311)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 79
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-36 Score=356.36 Aligned_cols=231 Identities=27% Similarity=0.446 Sum_probs=197.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.+.... ......+.+|+.+|+.++||||+++++++.+...+|+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 36899999999999999999999999999999999764322 22346788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~---~~~~vkl~DFG~a~~~~~~ 824 (934)
||||.+++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999999998765 4599999999999999999999999999999999999995 4567999999998643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..
T Consensus 178 ----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 228 (486)
T 3mwu_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (486)
T ss_dssp --------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 11234579999999999986 4899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC--CCCCCcccCCC
Q 002342 905 KTFANILHKDLKFPS--STPSSCKAANV 930 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~--~~~~s~~~k~l 930 (934)
+++..+..+.+.++. +...|..+++|
T Consensus 229 ~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 229 DILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp HHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred HHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 999999998876653 33455555443
No 80
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=329.59 Aligned_cols=218 Identities=27% Similarity=0.417 Sum_probs=183.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhC---CCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDML---DHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~--~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~~ 740 (934)
+..++|++++.||+|+||.||+|++..+++.||||++...... .......+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999999999999999998753211 111123455677777666 59999999999987
Q ss_pred CC-----eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 741 KT-----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 741 ~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
.. .+++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 54 5899999994 69999998776566999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
|++..... .......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 165 g~a~~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 165 GLARIYSY----------------------------QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp SCTTTSTT----------------------------CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred ccccccCC----------------------------CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 99854321 11223457999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002342 896 TPFRGKTRQKTFANILH 912 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~ 912 (934)
+||.+.+..+.+.++.+
T Consensus 217 ~pf~~~~~~~~~~~i~~ 233 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFD 233 (308)
T ss_dssp CSCCCSSHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 99999999988888865
No 81
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.9e-36 Score=333.09 Aligned_cols=216 Identities=29% Similarity=0.490 Sum_probs=168.5
Q ss_pred CCcccc---cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeE
Q 002342 669 QHFRPI---KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHV 744 (934)
Q Consensus 669 ~~y~i~---~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~ 744 (934)
++|.+. +.||+|+||.||++.+..+++.||||++.+. ....+.+|+.+++.+. ||||+++++++.+....
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 345554 7899999999999999999999999998753 3356778999999996 99999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecccCccc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLT 821 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~DFG~a~~~ 821 (934)
|+|||||++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp EEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 9999999999999999875 4599999999999999999999999999999999999998766 8999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 160 ~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 160 PPD---------------------------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp CC-------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCC---------------------------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 211 11223457899999999999999999999999999999999999999864
Q ss_pred C-------HHHHHHHHHcCCCCCCC
Q 002342 902 T-------RQKTFANILHKDLKFPS 919 (934)
Q Consensus 902 ~-------~~~~~~~i~~~~~~~p~ 919 (934)
+ ..+++..+..+.+.++.
T Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (325)
T 3kn6_A 213 DRSLTCTSAVEIMKKIKKGDFSFEG 237 (325)
T ss_dssp -----CCCHHHHHHHHTTTCCCCCS
T ss_pred ccccccccHHHHHHHHHcCCCCCCc
Confidence 3 35778888888877664
No 82
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=327.55 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=182.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
+..++|.+.+.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.+++..|
T Consensus 7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 83 (310)
T 3s95_A 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83 (310)
T ss_dssp ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence 4567999999999999999999999999999999988643 4566678899999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999999997643 459999999999999999999999999999999999999999999999999997643221
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
...... ..............+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ~~~~~~-------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 163 TQPEGL-------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred cccccc-------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 110000 00000111223356899999999999999999999999999999999999999975
No 83
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.2e-35 Score=322.04 Aligned_cols=218 Identities=30% Similarity=0.529 Sum_probs=193.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||++.+..++..+|+|.+.+... .....+.+|+.+++.++||||+++++++.+....|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999876432 2346788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 85 MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999998764 449999999999999999999999999999999999999 77889999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+.+..
T Consensus 163 ----------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 213 (277)
T 3f3z_A 163 ----------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS 213 (277)
T ss_dssp ----------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence 122345799999999998765 889999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 002342 905 KTFANILHKDLKFPS 919 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~ 919 (934)
+....+..+.+.+|.
T Consensus 214 ~~~~~~~~~~~~~~~ 228 (277)
T 3f3z_A 214 EVMLKIREGTFTFPE 228 (277)
T ss_dssp HHHHHHHHCCCCCCH
T ss_pred HHHHHHHhCCCCCCc
Confidence 999999999888775
No 84
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.5e-36 Score=331.66 Aligned_cols=213 Identities=29% Similarity=0.461 Sum_probs=188.1
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
.|...+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4778889999999999999999999999999987542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCC
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 829 (934)
|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 123 ~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 194 (321)
T 2c30_A 123 FLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----- 194 (321)
T ss_dssp CCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-----
T ss_pred cCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC-----
Confidence 9999999999865 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002342 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (934)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~ 909 (934)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 195 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 195 ----------------------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp ----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred ----------------------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 1112345799999999999999999999999999999999999999999998888888
Q ss_pred HHcCCC
Q 002342 910 ILHKDL 915 (934)
Q Consensus 910 i~~~~~ 915 (934)
+.....
T Consensus 253 ~~~~~~ 258 (321)
T 2c30_A 253 LRDSPP 258 (321)
T ss_dssp HHHSSC
T ss_pred HhcCCC
Confidence 876543
No 85
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.3e-36 Score=322.56 Aligned_cols=219 Identities=22% Similarity=0.370 Sum_probs=190.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
+.+..++|++.+.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++.+.+.
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 79 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 79 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence 4466789999999999999999999985 577899999976432 23568899999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 80 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 999999999999999997643 4599999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
. .........||+.|+|||++.+..++.++||||||+++|+|++ |.+||.+.+
T Consensus 159 ~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 159 D--------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp H--------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred c--------------------------ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 0 0111223457889999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHcCC
Q 002342 903 RQKTFANILHKD 914 (934)
Q Consensus 903 ~~~~~~~i~~~~ 914 (934)
..+....+..+.
T Consensus 213 ~~~~~~~~~~~~ 224 (269)
T 4hcu_A 213 NSEVVEDISTGF 224 (269)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhcCc
Confidence 999998888764
No 86
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.8e-36 Score=326.38 Aligned_cols=213 Identities=24% Similarity=0.411 Sum_probs=180.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||+|.+ .+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 6899999999999999999998 7789999999875432 2223356788999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++ ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 153 (288)
T 1ob3_A 80 EHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (288)
T ss_dssp ECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc----
Confidence 9995 58998887643 45999999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (288)
T 1ob3_A 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 1112344789999999999764 5899999999999999999999999999988887
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..+.+
T Consensus 211 ~~~~~ 215 (288)
T 1ob3_A 211 MRIFR 215 (288)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 87
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.7e-36 Score=352.03 Aligned_cols=230 Identities=30% Similarity=0.492 Sum_probs=192.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||+|+++.++..||+|++.+.... ......+.+|+.+|+.++||||++++++|.+...+|+||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999999999999999999865322 223467889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecccCcccCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~---~~vkl~DFG~a~~~~~~~ 825 (934)
|||.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~-- 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-- 191 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT--
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC--
Confidence 999999999988765 449999999999999999999999999999999999999764 4599999999855321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.......+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 192 --------------------------~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 244 (494)
T 3lij_A 192 --------------------------QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244 (494)
T ss_dssp --------------------------TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11223457999999999986 468999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC--CCCCcccCCC
Q 002342 906 TFANILHKDLKFPSS--TPSSCKAANV 930 (934)
Q Consensus 906 ~~~~i~~~~~~~p~~--~~~s~~~k~l 930 (934)
++..+..+.+.++.. ...|..+++|
T Consensus 245 ~~~~i~~~~~~~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 245 ILRKVEKGKYTFDSPEWKNVSEGAKDL 271 (494)
T ss_dssp HHHHHHHTCCCCCSGGGTTSCHHHHHH
T ss_pred HHHHHHhCCCCCCchhcccCCHHHHHH
Confidence 999999998877643 3345444443
No 88
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-35 Score=349.76 Aligned_cols=232 Identities=28% Similarity=0.457 Sum_probs=195.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh----------HHHHHHHHHHHHHHhCCCCCccceeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------NKVHRACAEREILDMLDHPFVPALYAS 737 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~----------~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (934)
.++|.+++.||+|+||.||+|.++.+++.||+|++.+...... .....+.+|+.+|+.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5789999999999999999999999999999999986533211 235678899999999999999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEe
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTD 814 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~D 814 (934)
+.+...+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 99999999999999999999998764 4499999999999999999999999999999999999998776 699999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhC
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG 894 (934)
||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus 193 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g 243 (504)
T 3q5i_A 193 FGLSSFFSKD----------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243 (504)
T ss_dssp CTTCEECCTT----------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEcCCC----------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhC
Confidence 9999653211 12234579999999999874 689999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCC--CCCCCcccCCC
Q 002342 895 YTPFRGKTRQKTFANILHKDLKFPS--STPSSCKAANV 930 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~s~~~k~l 930 (934)
.+||.+.+..+++..+..+.+.++. +...|..+++|
T Consensus 244 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 281 (504)
T 3q5i_A 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKEL 281 (504)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHH
Confidence 9999999999999999999887763 23345554443
No 89
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.1e-36 Score=337.53 Aligned_cols=230 Identities=29% Similarity=0.472 Sum_probs=191.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.+.... .......+.+|+.+++.++||||+++++++.+.+..|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 46899999999999999999999999999999999764321 2345678889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 002342 746 LITDYCPGGELFLLLDRQ--------------------------------------PTKVLKEDAVRFYAAEVVVALEYL 787 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qil~aL~yL 787 (934)
+|||||+|++|.+++... ....+++..++.++.||+.||.||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 012346788899999999999999
Q ss_pred HHCCCeecCCCCCCEEEecCC--cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCcc
Q 002342 788 HCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 865 (934)
Q Consensus 788 H~~giiHrDLKp~NILl~~~~--~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 865 (934)
|++||+||||||+|||++.++ .+||+|||++........ ..........||+.|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~-----------------------~~~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN-----------------------GEYYGMTTKAGTPYFV 241 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC-----------------------C--------CCCGGGC
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc-----------------------cccccccccCCCcccc
Confidence 999999999999999998766 899999999864321100 0011223557999999
Q ss_pred chhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002342 866 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 866 aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+..+...++..
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 298 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP 298 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc
Confidence 9999975 678899999999999999999999999999999999999888766643
No 90
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-35 Score=346.16 Aligned_cols=231 Identities=21% Similarity=0.264 Sum_probs=165.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-----CC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~ 742 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.+. .........+.+|+.+|+.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 47899999999999999999999999999999998764 3355566788999999999999999999999943 35
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|+||||+ +++|..++... ..+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+...
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 799999998 78999998764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh-cCCCCCchhHHHHHHHHHHHHHh--------
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 893 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~s~~~DiwSlG~iL~ellt-------- 893 (934)
....................................+||+.|+|||++ .+..|+.++|||||||+||||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 321110000000000000000000000011234566899999999987 45679999999999999999998
Q ss_pred ---CCCCCCCCC
Q 002342 894 ---GYTPFRGKT 902 (934)
Q Consensus 894 ---G~~Pf~~~~ 902 (934)
|++||.+.+
T Consensus 288 ~~~~~p~f~g~~ 299 (458)
T 3rp9_A 288 HADRGPLFPGSS 299 (458)
T ss_dssp GGGCCCSCC---
T ss_pred cccccccCCCCc
Confidence 888888765
No 91
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.9e-36 Score=339.69 Aligned_cols=223 Identities=24% Similarity=0.370 Sum_probs=185.8
Q ss_pred ccccccCCcccccccccCCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 736 (934)
.+.+..++|++.+.||+|+||.||++.+ ..+++.||||++.... .......+.+|+.+++.+ +||||+++++
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 3456678999999999999999999994 4567899999997542 344557789999999999 7899999999
Q ss_pred EEEeCC-eEEEEEEccCCCCchhhhccCCC--------------------------------------------------
Q 002342 737 SFQTKT-HVCLITDYCPGGELFLLLDRQPT-------------------------------------------------- 765 (934)
Q Consensus 737 ~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~-------------------------------------------------- 765 (934)
++...+ .+|+|||||++|+|.+++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 998754 48999999999999999976432
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCc
Q 002342 766 --------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (934)
Q Consensus 766 --------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 831 (934)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 248 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD----- 248 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT-----
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc-----
Confidence 1289999999999999999999999999999999999999999999999999965321110
Q ss_pred chhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002342 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (934)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i 910 (934)
........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+.+...
T Consensus 249 --------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 308 (359)
T 3vhe_A 249 --------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 308 (359)
T ss_dssp --------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred --------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH
Confidence 112234578999999999999999999999999999999998 99999987765544444
Q ss_pred Hc
Q 002342 911 LH 912 (934)
Q Consensus 911 ~~ 912 (934)
..
T Consensus 309 ~~ 310 (359)
T 3vhe_A 309 LK 310 (359)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 92
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=326.07 Aligned_cols=225 Identities=30% Similarity=0.522 Sum_probs=170.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35899999999999999999999999999999999764332333456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--- 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--- 165 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC---
Confidence 9999999999998764 345999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......+||+.|+|||++.+..++.++||||||+++|+|++|++||...+....+
T Consensus 166 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 221 (278)
T 3cok_A 166 ------------------------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221 (278)
T ss_dssp --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred ------------------------CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence 01122457899999999999999999999999999999999999999988777777
Q ss_pred HHHHcCCCCCCCC
Q 002342 908 ANILHKDLKFPSS 920 (934)
Q Consensus 908 ~~i~~~~~~~p~~ 920 (934)
..+....+.+|..
T Consensus 222 ~~~~~~~~~~~~~ 234 (278)
T 3cok_A 222 NKVVLADYEMPSF 234 (278)
T ss_dssp --CCSSCCCCCTT
T ss_pred HHHhhcccCCccc
Confidence 7666666655543
No 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=338.12 Aligned_cols=224 Identities=20% Similarity=0.272 Sum_probs=190.0
Q ss_pred ccccCCcccccccccCCcEEEEEEE-----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+..++|++.+.||+|+||.||+|. +..+++.||||.+... ........+.+|+.+++.++||||+++++++.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 144 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4556789999999999999999999 4557889999998643 23445567889999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEE
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVS 811 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vk 811 (934)
.....|+|||||++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.+| .+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999997642 23589999999999999999999999999999999999998555 599
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~el 891 (934)
|+|||+++..... ..........||+.|+|||++.+..++.++|||||||++|+|
T Consensus 225 L~DFG~a~~~~~~-------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el 279 (367)
T 3l9p_A 225 IGDFGMARDIYRA-------------------------GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279 (367)
T ss_dssp ECCCHHHHHHHHH-------------------------SSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ECCCccccccccc-------------------------cccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 9999998532110 011223345789999999999999999999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 892 LY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
++ |.+||.+.+..+++..+..+..
T Consensus 280 lt~g~~pf~~~~~~~~~~~i~~~~~ 304 (367)
T 3l9p_A 280 FSLGYMPYPSKSNQEVLEFVTSGGR 304 (367)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 98 9999999999999998887663
No 94
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=338.30 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=175.4
Q ss_pred cccccCCcccccccccCCcEEEEEE-----EEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCcccee
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLV-----ELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALY 735 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a-----~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~ 735 (934)
..+..++|.+.+.||+|+||.||+| .+..+++.||+|++.+. ....+..|+.+++.+. |+||+.++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 3456788999999999999999999 46778999999998754 2345777888888886 89999999
Q ss_pred EEEEeCCeEEEEEEccCCCCchhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec------
Q 002342 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------ 806 (934)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~------ 806 (934)
+++...+..|||||||++|+|.+++... ....+++..++.++.||+.||+|||++|||||||||+|||++.
T Consensus 134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence 9999999999999999999999999742 2356999999999999999999999999999999999999998
Q ss_pred -----CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 807 -----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 807 -----~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
++.+||+|||+|..+... .........+||+.|||||++.+..++.++||
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 268 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLF-------------------------PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDY 268 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGS-------------------------CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHH
T ss_pred ccccccCCEEEeeCchhhhhhcc-------------------------CCCceeeeecCCCCCCChHHhcCCCCCccccH
Confidence 899999999999543211 11122345689999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCC
Q 002342 882 WALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 882 wSlG~iL~elltG~~Pf~~ 900 (934)
|||||++|+|++|++||..
T Consensus 269 wslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 269 FGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp HHHHHHHHHHHHSSCCCEE
T ss_pred HHHHHHHHHHHhCCCcccc
Confidence 9999999999999999864
No 95
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2e-35 Score=330.52 Aligned_cols=224 Identities=21% Similarity=0.307 Sum_probs=193.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+..++|++.+.||+|+||.||++.+. .+++.||+|++.+.. .......+.+|+.+++.++||||+++++++.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 455689999999999999999999997 355899999997642 3455677899999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDL 797 (934)
..+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 9999999999999999999997642 146999999999999999999999999999999
Q ss_pred CCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCc
Q 002342 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 877 (934)
Q Consensus 798 Kp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~ 877 (934)
||+|||++.++.+||+|||++....... .........||+.|+|||++.+..++.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~ 255 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTT 255 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCH
T ss_pred CcceEEECCCCeEEEeecCCCcccccCc-------------------------cccccCCCcccceecChhhhccCCcCc
Confidence 9999999999999999999985432110 011223446899999999999999999
Q ss_pred hhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 878 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 878 ~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
++|||||||++|+|++ |..||.+.+..++...+..+..
T Consensus 256 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 294 (343)
T 1luf_A 256 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 294 (343)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC
T ss_pred ccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCc
Confidence 9999999999999998 9999999999999988888765
No 96
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=325.24 Aligned_cols=215 Identities=27% Similarity=0.391 Sum_probs=182.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 468999999999999999999999999999999987642 3444556788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|..++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 155 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--- 155 (311)
T ss_dssp EECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc---
Confidence 9999999999888654 45999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 211 (311)
T 4agu_A 156 ------------------------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211 (311)
T ss_dssp ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234578999999999976 6779999999999999999999999999988877
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+..+..
T Consensus 212 ~~~~~~ 217 (311)
T 4agu_A 212 LYLIRK 217 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766643
No 97
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.8e-35 Score=320.44 Aligned_cols=226 Identities=29% Similarity=0.480 Sum_probs=190.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 34568999999999999999999999999999999999764333334456788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 87 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999999765 34999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
.......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.
T Consensus 165 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 216 (276)
T 2h6d_A 165 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216 (276)
T ss_dssp ----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 11123468999999999988766 5799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCC
Q 002342 904 QKTFANILHKDLKFPSS 920 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~~ 920 (934)
...++.+..+.+.+|..
T Consensus 217 ~~~~~~~~~~~~~~~~~ 233 (276)
T 2h6d_A 217 PTLFKKIRGGVFYIPEY 233 (276)
T ss_dssp HHHHHHHHHCCCCCCTT
T ss_pred HHHHHHhhcCcccCchh
Confidence 99999998888777754
No 98
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-35 Score=326.81 Aligned_cols=217 Identities=25% Similarity=0.308 Sum_probs=180.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 35799999999999999999999999999999999987655555666788999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE-- 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc--
Confidence 99999999999999764 35999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
.........||+.|+|||++.+..++.++||||||+++|+|++|+.||.+.+...+
T Consensus 188 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 243 (309)
T 2h34_A 188 ------------------------KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM 243 (309)
T ss_dssp ---------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH
T ss_pred ------------------------ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH
Confidence 01112345699999999999999999999999999999999999999988776644
Q ss_pred HHHHH
Q 002342 907 FANIL 911 (934)
Q Consensus 907 ~~~i~ 911 (934)
...+.
T Consensus 244 ~~~~~ 248 (309)
T 2h34_A 244 GAHIN 248 (309)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 44443
No 99
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-35 Score=324.89 Aligned_cols=219 Identities=33% Similarity=0.530 Sum_probs=191.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 368999999999999999999999999999999998642 22335678999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~~ 824 (934)
|||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~- 161 (304)
T 2jam_A 85 MQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161 (304)
T ss_dssp ECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred EEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence 9999999999998764 349999999999999999999999999999999999999 6788999999999853210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 213 (304)
T 2jam_A 162 ----------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213 (304)
T ss_dssp ----------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred ----------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 1122346999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 002342 905 KTFANILHKDLKFPSS 920 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~~ 920 (934)
..+..+.++.+.++..
T Consensus 214 ~~~~~i~~~~~~~~~~ 229 (304)
T 2jam_A 214 KLFEKIKEGYYEFESP 229 (304)
T ss_dssp HHHHHHHHCCCCCCTT
T ss_pred HHHHHHHcCCCCCCcc
Confidence 9999999988776653
No 100
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.4e-35 Score=327.16 Aligned_cols=224 Identities=28% Similarity=0.459 Sum_probs=193.5
Q ss_pred cCCcccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
.+.|.+. +.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.+++.+ .||||+++++++...+..|
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~ 105 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence 3568887 889999999999999999999999999986532 233456788999999999 5699999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccCcccC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTS 822 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a~~~~ 822 (934)
+|||||.+++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 185 (327)
T 3lm5_A 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185 (327)
T ss_dssp EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence 9999999999999997665567999999999999999999999999999999999999987 7899999999996532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.. ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 186 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 186 HA----------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp ------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc----------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 11234579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPSS 920 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~ 920 (934)
..+.+..+......++..
T Consensus 238 ~~~~~~~i~~~~~~~~~~ 255 (327)
T 3lm5_A 238 NQETYLNISQVNVDYSEE 255 (327)
T ss_dssp HHHHHHHHHHTCCCCCTT
T ss_pred chHHHHHHHhcccccCch
Confidence 999999888877766654
No 101
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=327.85 Aligned_cols=218 Identities=27% Similarity=0.430 Sum_probs=183.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC--eE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~ 744 (934)
..++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+|+.++||||+++++++.... ..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 45789999999999999999999999999999999975432 223466789999999999999999999998655 88
Q ss_pred EEEEEccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl----~~~~~vkl~DFG~a~ 819 (934)
|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999999976422 239999999999999999999999999999999999999 677789999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc--------CCCCCchhHHHHHHHHHHHH
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--------GAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--------~~~~s~~~DiwSlG~iL~el 891 (934)
..... ......+||+.|+|||++. +..++.++|||||||++|+|
T Consensus 165 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el 216 (319)
T 4euu_A 165 ELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (319)
T ss_dssp ECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred ecCCC----------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence 53211 1123457999999999996 57888999999999999999
Q ss_pred HhCCCCCCCC----CHHHHHHHHHcCC
Q 002342 892 LYGYTPFRGK----TRQKTFANILHKD 914 (934)
Q Consensus 892 ltG~~Pf~~~----~~~~~~~~i~~~~ 914 (934)
++|+.||... ...+++..+..+.
T Consensus 217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 217 ATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp HHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred HhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 9999999743 3355666666654
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-36 Score=334.12 Aligned_cols=230 Identities=23% Similarity=0.349 Sum_probs=190.1
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 736 (934)
.+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+|+.+ +||||+++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 35567789999999999999999999983 466789999997542 233456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT---------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~yLH~~giiHr 795 (934)
++...+..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 196 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999976532 237999999999999999999999999999
Q ss_pred CCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC
Q 002342 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 875 (934)
Q Consensus 796 DLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~ 875 (934)
||||+|||++.++.+||+|||++....... .........||+.|+|||++.+..+
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~ 251 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDS-------------------------NYVVRGNARLPVKWMAPESLFEGIY 251 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCT-------------------------TSEEETTEEECGGGCCHHHHHHCCC
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCc-------------------------cceeccCccCccCccCHHHhccCCC
Confidence 999999999999999999999986432110 0112234467899999999999999
Q ss_pred CchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCC
Q 002342 876 TSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 876 s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~ 919 (934)
+.++|||||||++|+|++ |.+||.+......+..+.......+.
T Consensus 252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 296 (344)
T 1rjb_A 252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ 296 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC
T ss_pred ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCC
Confidence 999999999999999998 99999988877666666665544433
No 103
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-35 Score=331.99 Aligned_cols=224 Identities=23% Similarity=0.343 Sum_probs=193.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcccee
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~ 735 (934)
+.+..++|.+.+.||+|+||.||+|.+..+ +..||+|++... ........+.+|+.+++.+ +||||++++
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 446678999999999999999999998643 368999999764 2445567889999999999 999999999
Q ss_pred EEEEeCCeEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
+++...+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 221 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence 99999999999999999999999997653 2359999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
||++.++.+||+|||++....... .........||+.|+|||++.+..++.++||
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 276 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHID-------------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCC-------------------------TTCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred EEEcCCCcEEEcccCccccccccc-------------------------ccccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence 999999999999999996542111 0112234467899999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
|||||++|+|++ |..||.+.+..++...+..+.
T Consensus 277 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 310 (382)
T 3tt0_A 277 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310 (382)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999999 999999999999888887764
No 104
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-35 Score=328.32 Aligned_cols=226 Identities=21% Similarity=0.309 Sum_probs=194.4
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeE
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~ 736 (934)
+.+.+..++|.+.+.||+|+||.||++.+. .++..||+|++.... .......+.+|+.+|+.++||||+++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 93 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYG 93 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence 445667789999999999999999999984 455899999987542 4556678899999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT----------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIY 794 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------------~~l~~~~~~~i~~qil~aL~yLH~~giiH 794 (934)
++...+..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+|
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 173 (314)
T 2ivs_A 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173 (314)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99999999999999999999999976432 34899999999999999999999999999
Q ss_pred cCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 874 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~ 874 (934)
|||||+|||++.++.+||+|||++........ ........||+.|+|||++.+..
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~ 228 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSQGRIPVKWMAIESLFDHI 228 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------------------EECSSCCCSCGGGCCHHHHHHCE
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcccccChhhhcCCC
Confidence 99999999999999999999999865321110 11123346788999999999999
Q ss_pred CCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 875 HTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 875 ~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
++.++|||||||++|+|++ |..||.+.+...+...+..+.
T Consensus 229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 269 (314)
T 2ivs_A 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH 269 (314)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC
Confidence 9999999999999999999 999999999888888877654
No 105
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-35 Score=322.27 Aligned_cols=221 Identities=23% Similarity=0.325 Sum_probs=194.9
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++.+.||+|+||.||++.+..++..||+|.+... ......+.+|+.+++.++||||+++++++...+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3456778999999999999999999999999999999998753 334567889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999999987666679999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
... ........||+.|+|||++.+..++.++||||||+++|+|++ |.+||.+.
T Consensus 163 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 163 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp SSS--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111 111223457889999999999999999999999999999999 99999998
Q ss_pred CHHHHHHHHHcC
Q 002342 902 TRQKTFANILHK 913 (934)
Q Consensus 902 ~~~~~~~~i~~~ 913 (934)
+.......+..+
T Consensus 217 ~~~~~~~~~~~~ 228 (288)
T 3kfa_A 217 DLSQVYELLEKD 228 (288)
T ss_dssp CGGGHHHHHHTT
T ss_pred CHHHHHHHHhcc
Confidence 888887777654
No 106
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-35 Score=319.03 Aligned_cols=227 Identities=27% Similarity=0.433 Sum_probs=183.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
+..++|++.+.||+|+||.||++.+ ++..||+|++....... ......+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 4568999999999999999999998 58899999987643222 23356788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEEec--------CCcEEEE
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQG--------NGHVSLT 813 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g---iiHrDLKp~NILl~~--------~~~vkl~ 813 (934)
|+||||+++++|.+++.. +.+++..+..++.|++.||.|||++| |+||||||+|||++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999999864 35999999999999999999999999 999999999999985 6789999
Q ss_pred ecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh
Q 002342 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt 893 (934)
|||++...... ......||+.|+|||++.+..++.++||||||+++|+|++
T Consensus 159 Dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 159 DFGLAREWHRT-----------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCCC------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccc-----------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99998543210 1123468999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCcc
Q 002342 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPSSCK 926 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~ 926 (934)
|+.||.+.+.......+..+....+.....+..
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEP 242 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHH
Confidence 999999999988888887777655544333333
No 107
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.4e-35 Score=318.54 Aligned_cols=221 Identities=31% Similarity=0.506 Sum_probs=192.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.+...... .....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 3579999999999999999999999999999999986533221 1356788999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecccCcc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~----~vkl~DFG~a~~ 820 (934)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999764 4599999999999999999999999999999999999998877 899999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.... .......||+.|+|||++.+..++.++||||||+++|+|++|..||.+
T Consensus 162 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 162 IEAG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CC------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCC----------------------------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 3211 111234689999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCC
Q 002342 901 KTRQKTFANILHKDLKFP 918 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p 918 (934)
.+..+.+..+......++
T Consensus 214 ~~~~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 214 ETKQETLTNISAVNYDFD 231 (283)
T ss_dssp SSHHHHHHHHHTTCCCCC
T ss_pred cchHHHHHHhHhcccCCc
Confidence 999999998888777665
No 108
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-35 Score=336.96 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=182.7
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEE
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 738 (934)
....+..++|.+.+.||+|+||.||++++. .++..||||.+.... .......+.+|+.+|++++||||+++++++
T Consensus 38 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp TSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 344567789999999999999999999987 467789999987542 345567789999999999999999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
...+..|+|||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 194 (373)
T 2qol_A 116 TKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194 (373)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred eeCCceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccc
Confidence 9999999999999999999999764 345999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
......... ........+++.|+|||++.+..++.++|||||||++|+|++ |+.|
T Consensus 195 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P 250 (373)
T 2qol_A 195 RVLEDDPEA------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250 (373)
T ss_dssp -------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred cccccCCcc------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCC
Confidence 654321100 011112346789999999999999999999999999999997 9999
Q ss_pred CCCCCHHHHHHHHHcC
Q 002342 898 FRGKTRQKTFANILHK 913 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~ 913 (934)
|.+.+..+++..+..+
T Consensus 251 ~~~~~~~~~~~~i~~~ 266 (373)
T 2qol_A 251 YWEMSNQDVIKAVDEG 266 (373)
T ss_dssp TTTCCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHcC
Confidence 9999999888888665
No 109
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.6e-35 Score=326.86 Aligned_cols=228 Identities=21% Similarity=0.336 Sum_probs=192.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~ 737 (934)
+.+..++|++.+.||+|+||.||++.+ ..+++.||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 95 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA 95 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence 456678999999999999999999996 3467899999997542 334557788999999999 99999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPT----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~N 801 (934)
+...+..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 175 (313)
T 1t46_A 96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175 (313)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence 9999999999999999999999976532 248999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 802 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 230 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDV 230 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcceeeChHHhcCCCCChHHHH
Confidence 9999999999999999865422110 111234467889999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
|||||++|+|++ |.+||.+......+..+.......+
T Consensus 231 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~ 268 (313)
T 1t46_A 231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268 (313)
T ss_dssp HHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCC
Confidence 999999999998 9999998777666555555444433
No 110
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.7e-35 Score=321.89 Aligned_cols=226 Identities=21% Similarity=0.317 Sum_probs=184.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..+.+..++|.+.+.||+|+||.||++.+.. .+|+|+++.. .........+.+|+.+|+.++||||+++++++..
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 103 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK- 103 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecC-CCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-
Confidence 3456778999999999999999999998633 5889988653 2345566788999999999999999999998754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..++||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred CcEEEEEecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 5689999999999999999754 356999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|+.||
T Consensus 183 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf 237 (307)
T 3lb7_A 183 SRWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp ------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 2100 011223457999999999996 667888999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCC
Q 002342 899 RGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~p 918 (934)
.+.+..+.+..+.......|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~ 257 (307)
T 3lb7_A 238 SHINNRDQIIFMVGRGYASP 257 (307)
T ss_dssp TTCCCHHHHHHHHHHTCCCC
T ss_pred ccCCcHHHHHHHHhcCCCCc
Confidence 98777666555554444333
No 111
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-35 Score=329.65 Aligned_cols=216 Identities=22% Similarity=0.344 Sum_probs=178.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|++++.||+|+||.||++.+..+++.||||++.... ........+.+|+.+|+.++||||+++++++...+.+|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34679999999999999999999999999999999997643 23334456778999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-----cCCcEEEEecccCcc
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-----GNGHVSLTDFDLSCL 820 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-----~~~~vkl~DFG~a~~ 820 (934)
+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++..
T Consensus 110 lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999995 6999999775 3499999999999999999999999999999999999995 445699999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
.... .......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus 187 ~~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 187 FGIP---------------------------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp HC--------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCc---------------------------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 3211 1122345789999999999875 48999999999999999999999999
Q ss_pred CCCHHHHHHHHHc
Q 002342 900 GKTRQKTFANILH 912 (934)
Q Consensus 900 ~~~~~~~~~~i~~ 912 (934)
+.+..+.+..+..
T Consensus 240 ~~~~~~~~~~~~~ 252 (329)
T 3gbz_A 240 GDSEIDQLFKIFE 252 (329)
T ss_dssp CSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999888887765
No 112
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.2e-35 Score=322.66 Aligned_cols=222 Identities=30% Similarity=0.445 Sum_probs=180.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 45789999999999999999999999999999999986544556667788999999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 747 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999999998641 2355999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--C
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--T 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~--~ 902 (934)
........|++.|+|||++.+..++.++||||||+++|+|++|..||.+. .
T Consensus 190 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 242 (310)
T 2wqm_A 190 ---------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242 (310)
T ss_dssp ------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC
T ss_pred ---------------------------CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 01122457899999999999999999999999999999999999999764 3
Q ss_pred HHHHHHHHHcCCC
Q 002342 903 RQKTFANILHKDL 915 (934)
Q Consensus 903 ~~~~~~~i~~~~~ 915 (934)
.......+..+.+
T Consensus 243 ~~~~~~~~~~~~~ 255 (310)
T 2wqm_A 243 LYSLCKKIEQCDY 255 (310)
T ss_dssp HHHHHHHHHTTCS
T ss_pred HHHHHHHhhcccC
Confidence 3455666666554
No 113
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6e-35 Score=331.09 Aligned_cols=212 Identities=25% Similarity=0.456 Sum_probs=179.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 579999999999999999999999999999999997642 34455677889999999999999999999998654
Q ss_pred -eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..|+|||||+ ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred cceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 7899999995 678888753 3899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 178 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 178 GT----------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc----------------------------ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 01123457999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcC
Q 002342 902 TRQKTFANILHK 913 (934)
Q Consensus 902 ~~~~~~~~i~~~ 913 (934)
+..+.+..+.+.
T Consensus 230 ~~~~~~~~i~~~ 241 (371)
T 2xrw_A 230 DHIDQWNKVIEQ 241 (371)
T ss_dssp SHHHHHHHHHC-
T ss_pred CHHHHHHHHHHH
Confidence 998888888764
No 114
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-35 Score=337.89 Aligned_cols=229 Identities=21% Similarity=0.319 Sum_probs=194.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++.+.||+|+||.||++.+..+++.||||++.... .......+.+|+.+|+.++||||+++++++...+
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 34567789999999999999999999999899999999987542 3445567889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+|||||++++|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred CcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999999999764 2358999999999999999999999999999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus 265 ~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 265 DGVY-------------------------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp TSEE-------------------------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCce-------------------------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1000 001112245778999999998889999999999999999998 99999999
Q ss_pred CHHHHHHHHHcCC-CCCCC
Q 002342 902 TRQKTFANILHKD-LKFPS 919 (934)
Q Consensus 902 ~~~~~~~~i~~~~-~~~p~ 919 (934)
+..+....+..+. +++|.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~ 338 (377)
T 3cbl_A 320 SNQQTREFVEKGGRLPCPE 338 (377)
T ss_dssp CHHHHHHHHHTTCCCCCCT
T ss_pred CHHHHHHHHHcCCCCCCCC
Confidence 9988887776653 34443
No 115
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.1e-35 Score=318.37 Aligned_cols=219 Identities=18% Similarity=0.308 Sum_probs=190.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC--C
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--~ 742 (934)
.+..++|++.+.||+|+||.||++.+ ++..||+|++.... ........+.+|+.+++.++||||+++++++.+. .
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 82 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence 45678999999999999999999998 58899999998643 2445557789999999999999999999999876 7
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
..++||||+++++|.+++.......+++..+..++.||+.||.|||++| |+||||||+||+++.++.++|+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 8899999999999999998765556999999999999999999999999 99999999999999999999999998733
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCc---hhHHHHHHHHHHHHHhCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~---~~DiwSlG~iL~elltG~~P 897 (934)
.. .....||+.|+|||++.+..++. ++|||||||++|+|++|+.|
T Consensus 163 ~~--------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 210 (271)
T 3kmu_A 163 FQ--------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210 (271)
T ss_dssp TS--------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred ec--------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 11 12346899999999998765544 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCCCC
Q 002342 898 FRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~p 918 (934)
|.+.+..+....+.......+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~ 231 (271)
T 3kmu_A 211 FADLSNMEIGMKVALEGLRPT 231 (271)
T ss_dssp TTTSCHHHHHHHHHHSCCCCC
T ss_pred ccccChHHHHHHHHhcCCCCC
Confidence 999999888888876654433
No 116
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-35 Score=321.52 Aligned_cols=220 Identities=30% Similarity=0.504 Sum_probs=187.7
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|.+.+.||+|+||.||+|.+..++..+|+|++.+.. .......+.+|+.+|+.++||||+++++++.+....|+||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 68999999999999999999999999999999998653 2233567889999999999999999999999999999999
Q ss_pred EccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCC
Q 002342 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~ 823 (934)
||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 999999999988542 23559999999999999999999999999999999999999 4567899999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. ......+||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 180 ~----------------------------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~ 230 (285)
T 3is5_A 180 D----------------------------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230 (285)
T ss_dssp -----------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH
Confidence 1 1123457999999999986 5688999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCC
Q 002342 904 QKTFANILHKDLKFPS 919 (934)
Q Consensus 904 ~~~~~~i~~~~~~~p~ 919 (934)
.+....+..+...++.
T Consensus 231 ~~~~~~~~~~~~~~~~ 246 (285)
T 3is5_A 231 EEVQQKATYKEPNYAV 246 (285)
T ss_dssp HHHHHHHHHCCCCCCC
T ss_pred HHHHhhhccCCccccc
Confidence 8888888776665554
No 117
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-35 Score=333.92 Aligned_cols=210 Identities=29% Similarity=0.479 Sum_probs=180.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++++.||+|+||.||+|.+..+|+.||||.+... .........+.+|+.+|+.++||||+++++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSST-TSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 47899999999999999999999999999999998654 23445567788999999999999999999999865
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 3469999999 8999999876 34999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 179 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 179 DS------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CS------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 1234578999999999987 7889999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+.+..|.+
T Consensus 229 ~~~~~~l~~i~~ 240 (367)
T 1cm8_A 229 SDHLDQLKEIMK 240 (367)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999888887765
No 118
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.9e-35 Score=324.41 Aligned_cols=227 Identities=27% Similarity=0.443 Sum_probs=184.6
Q ss_pred cCCcccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEE
Q 002342 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~ 745 (934)
.+.|++. +.||+|+||.||+|.+..+++.||||++.+.. ......+.+|+.+|.++ +||||+++++++.+.+.+|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4679986 78999999999999999999999999997642 23346788999999985 7999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEecccCcccC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTS 822 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~a~~~~ 822 (934)
+|||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++....
T Consensus 88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999999765 45999999999999999999999999999999999999988765 9999999986432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----CCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
..... ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|++|
T Consensus 166 ~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 225 (316)
T 2ac3_A 166 LNGDC--------------------SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225 (316)
T ss_dssp ------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCS
T ss_pred cCCcc--------------------ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCC
Confidence 11000 0000112234579999999999975 5578899999999999999999999
Q ss_pred CCCCC---------------HHHHHHHHHcCCCCCCC
Q 002342 898 FRGKT---------------RQKTFANILHKDLKFPS 919 (934)
Q Consensus 898 f~~~~---------------~~~~~~~i~~~~~~~p~ 919 (934)
|.+.+ ...++..+..+.+.+|.
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (316)
T 2ac3_A 226 FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262 (316)
T ss_dssp CCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH
T ss_pred CcccccccccccccccchhHHHHHHHHHhccCcccCc
Confidence 98765 24567788888887774
No 119
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=330.98 Aligned_cols=213 Identities=25% Similarity=0.402 Sum_probs=178.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 748 (934)
++|++++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+|+.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 689999999999999999999999999999999875321 111123457999999999999999999999999999999
Q ss_pred EccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCC
Q 002342 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (934)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 828 (934)
||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~---- 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---- 153 (324)
T ss_dssp ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC----
Confidence 9995 6899988765 345999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (324)
T 3mtl_A 154 -----------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210 (324)
T ss_dssp --------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111234478999999999987 56899999999999999999999999999998888
Q ss_pred HHHHc
Q 002342 908 ANILH 912 (934)
Q Consensus 908 ~~i~~ 912 (934)
..+..
T Consensus 211 ~~i~~ 215 (324)
T 3mtl_A 211 HFIFR 215 (324)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 120
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.4e-35 Score=329.59 Aligned_cols=222 Identities=30% Similarity=0.508 Sum_probs=192.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~ 741 (934)
.++|++.+.||+|+||.||+|.+..+|+.||||++...... .......+.+|+.+++.+ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 35799999999999999999999989999999998764311 112245678899999999 899999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999999999764 45999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC------CCCCchhHHHHHHHHHHHHHhCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~s~~~DiwSlG~iL~elltG~ 895 (934)
... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus 251 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~ 302 (365)
T 2y7j_A 251 EPG----------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302 (365)
T ss_dssp CTT----------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred CCC----------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence 211 11234579999999999963 35788999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCC
Q 002342 896 TPFRGKTRQKTFANILHKDLKFPS 919 (934)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~p~ 919 (934)
+||.+.+....+..+..+.+.++.
T Consensus 303 ~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 303 PPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCC
Confidence 999999999999999888877653
No 121
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.5e-35 Score=337.22 Aligned_cols=211 Identities=27% Similarity=0.458 Sum_probs=186.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC------CCCCccceeEEEEe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML------DHPFVPALYASFQT 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~Iv~l~~~~~~ 740 (934)
...+|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+ +|+||+.+++++..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 357899999999999999999999999999999998753 34456677888888877 57799999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEEecccC
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLS 818 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~--vkl~DFG~a 818 (934)
.+++|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 171 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 171 RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred CCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999999999 579999998776566999999999999999999999999999999999999999887 999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.... ......+||+.|+|||++.+..++.++|||||||+||+|++|.+||
T Consensus 250 ~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 250 CYEH------------------------------QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp EETT------------------------------CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eecC------------------------------CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 5421 1123457999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002342 899 RGKTRQKTFANILH 912 (934)
Q Consensus 899 ~~~~~~~~~~~i~~ 912 (934)
.+.+..+.+..+..
T Consensus 300 ~~~~~~~~l~~i~~ 313 (429)
T 3kvw_A 300 PGEDEGDQLACMIE 313 (429)
T ss_dssp CCSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999888877764
No 122
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.7e-35 Score=316.41 Aligned_cols=221 Identities=24% Similarity=0.356 Sum_probs=188.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++++.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 45577889999999999999999999874 678899999986432 2356889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 93 PIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp SEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 9999999999999999997632 459999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.. .........||+.|+|||++.+..++.++||||||+++|+|++ |++||.+.
T Consensus 172 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 172 DD--------------------------EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp CH--------------------------HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cc--------------------------ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 10 0011223357889999999999999999999999999999998 99999999
Q ss_pred CHHHHHHHHHcCCC
Q 002342 902 TRQKTFANILHKDL 915 (934)
Q Consensus 902 ~~~~~~~~i~~~~~ 915 (934)
+..+....+..+..
T Consensus 226 ~~~~~~~~~~~~~~ 239 (283)
T 3gen_A 226 TNSETAEHIAQGLR 239 (283)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred ChhHHHHHHhcccC
Confidence 99999988887654
No 123
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.9e-35 Score=324.62 Aligned_cols=216 Identities=25% Similarity=0.357 Sum_probs=185.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+..|+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 4679999999999999999999999999999999987642 344455667899999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 177 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-- 177 (331)
T ss_dssp EEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--
Confidence 99999999888876654 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~ 905 (934)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 178 -------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 232 (331)
T 4aaa_A 178 -------------------------GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232 (331)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred -------------------------ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 1112345789999999999875 78899999999999999999999999998887
Q ss_pred HHHHHHc
Q 002342 906 TFANILH 912 (934)
Q Consensus 906 ~~~~i~~ 912 (934)
.+..+..
T Consensus 233 ~~~~~~~ 239 (331)
T 4aaa_A 233 QLYHIMM 239 (331)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766653
No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-35 Score=327.44 Aligned_cols=219 Identities=25% Similarity=0.376 Sum_probs=179.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCccceeEEEEeCCe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTH 743 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~~ 743 (934)
+..+.|++++.||+|+||.||++.+ .+++.||+|++.... ........+.+|+.+|+.++| |||+++++++.....
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 4567899999999999999999988 568899999997643 345556788999999999976 999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|+|||+. +++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 84 IYMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEEECCC-SEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99999954 89999999875 4599999999999999999999999999999999999997 68999999999965421
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCchhHHHHHHHHHHHHH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~s~~~DiwSlG~iL~ell 892 (934)
.. ........+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 160 DT-------------------------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred cc-------------------------ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 11 0112235579999999999965 67888999999999999999
Q ss_pred hCCCCCCCCCH-HHHHHHHHcCCC
Q 002342 893 YGYTPFRGKTR-QKTFANILHKDL 915 (934)
Q Consensus 893 tG~~Pf~~~~~-~~~~~~i~~~~~ 915 (934)
+|++||.+... ...+..+.....
T Consensus 215 ~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 215 YGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp HSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred hCCCcchhhhhHHHHHHHHhcCCc
Confidence 99999987443 355555655433
No 125
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.5e-35 Score=320.34 Aligned_cols=220 Identities=18% Similarity=0.265 Sum_probs=184.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCC-------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-------~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (934)
.+..++|++.+.||+|+||.||++.+..++ ..||+|++.+. .......+.+|+.+++.++||||++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 355679999999999999999999998877 57999998754 33455678899999999999999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--------
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------- 809 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~-------- 809 (934)
+...+..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999999997652 44999999999999999999999999999999999999998887
Q ss_pred EEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHH
Q 002342 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILL 888 (934)
Q Consensus 810 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL 888 (934)
+||+|||++.... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~kl~Dfg~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (289)
T 4fvq_A 160 IKLSDPGISITVL-------------------------------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTL 208 (289)
T ss_dssp EEECCCCSCTTTS-------------------------------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred eeeccCccccccc-------------------------------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence 9999999984321 1123458899999999987 7789999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
|+|++ |.+||......... .+......+|..
T Consensus 209 ~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 240 (289)
T 4fvq_A 209 WEICSGGDKPLSALDSQRKL-QFYEDRHQLPAP 240 (289)
T ss_dssp HHHHTTTCCTTTTSCHHHHH-HHHHTTCCCCCC
T ss_pred HHHHcCCCCCccccchHHHH-HHhhccCCCCCC
Confidence 99999 55556555554444 444455555543
No 126
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-35 Score=328.41 Aligned_cols=222 Identities=21% Similarity=0.327 Sum_probs=184.7
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeE----EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
..+..++|++++.||+|+||.||+|.+..++.. ||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 85 (325)
T 3kex_A 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP 85 (325)
T ss_dssp CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 345678999999999999999999999888876 6666654321 1222345678999999999999999999886
Q ss_pred eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
+...++||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 86 -~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 86 -GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp -BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred -CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 46789999999999999999764 3458999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf 898 (934)
....... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 164 ~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 164 LLPPDDK-------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp GSCCCTT-------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccCcccc-------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 5432111 112234568889999999999999999999999999999999 99999
Q ss_pred CCCCHHHHHHHHHcCC
Q 002342 899 RGKTRQKTFANILHKD 914 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~ 914 (934)
.+.+..++...+..+.
T Consensus 219 ~~~~~~~~~~~~~~~~ 234 (325)
T 3kex_A 219 AGLRLAEVPDLLEKGE 234 (325)
T ss_dssp TTSCTTHHHHHHHTTC
T ss_pred cccCHHHHHHHHHcCC
Confidence 9998888888887764
No 127
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-35 Score=325.31 Aligned_cols=218 Identities=28% Similarity=0.431 Sum_probs=183.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe-----
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----- 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~----- 740 (934)
..++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 4678999999999999999999999999999999987542 2335678899999999 89999999999986
Q ss_pred -CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
.+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 5689999999999999999987655569999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG 894 (934)
..... ........||+.|+|||++. +..++.++|||||||++|+|++|
T Consensus 178 ~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g 230 (326)
T 2x7f_A 178 QLDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230 (326)
T ss_dssp ----------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS
T ss_pred ecCcC---------------------------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC
Confidence 43210 11123457999999999997 56788999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCC
Q 002342 895 YTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
.+||.+.+....+..+.....
T Consensus 231 ~~p~~~~~~~~~~~~~~~~~~ 251 (326)
T 2x7f_A 231 APPLCDMHPMRALFLIPRNPA 251 (326)
T ss_dssp SCTTTTSCHHHHHHHHHHSCC
T ss_pred CCCCCCCcHHHHHHHhhcCcc
Confidence 999999888887777766544
No 128
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.5e-35 Score=338.86 Aligned_cols=217 Identities=24% Similarity=0.408 Sum_probs=189.8
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
...+.+..++|++.+.||+|+||.||++.+ .++.||||+++... ....+.+|+.+|++++||||+++++++..
T Consensus 185 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 257 (450)
T 1k9a_A 185 RSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257 (450)
T ss_dssp HTTCBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred ccccccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEc
Confidence 456778889999999999999999999988 47899999987542 34578899999999999999999999876
Q ss_pred CC-eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 741 KT-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 741 ~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
.. .+|+|||||++|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus 258 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 54 79999999999999999987655558999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf 898 (934)
.... ......+++.|+|||++.+..++.++|||||||+||+|++ |..||
T Consensus 338 ~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~ 387 (450)
T 1k9a_A 338 EASS------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387 (450)
T ss_dssp ECC------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred cccc------------------------------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3211 0112257889999999999999999999999999999998 99999
Q ss_pred CCCCHHHHHHHHHcCC
Q 002342 899 RGKTRQKTFANILHKD 914 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~ 914 (934)
.+.+..+++..+..+.
T Consensus 388 ~~~~~~~~~~~i~~~~ 403 (450)
T 1k9a_A 388 PRIPLKDVVPRVEKGY 403 (450)
T ss_dssp TTSCTTTHHHHHHTTC
T ss_pred CCCCHHHHHHHHHcCC
Confidence 9998888888887763
No 129
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.1e-35 Score=315.62 Aligned_cols=221 Identities=23% Similarity=0.335 Sum_probs=190.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++.+.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI 78 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence 456789999999999999999999774 677899999976432 235688999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999999999764 245999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ........||+.|+|||++.+..++.++||||||+++|+|++ |.+||.+.+.
T Consensus 158 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 211 (268)
T 3sxs_A 158 Q--------------------------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211 (268)
T ss_dssp C--------------------------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred h--------------------------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence 0 011223356788999999999889999999999999999998 9999999999
Q ss_pred HHHHHHHHcCCCCC
Q 002342 904 QKTFANILHKDLKF 917 (934)
Q Consensus 904 ~~~~~~i~~~~~~~ 917 (934)
......+..+....
T Consensus 212 ~~~~~~~~~~~~~~ 225 (268)
T 3sxs_A 212 SEVVLKVSQGHRLY 225 (268)
T ss_dssp HHHHHHHHTTCCCC
T ss_pred HHHHHHHHcCCCCC
Confidence 98888888766443
No 130
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.6e-35 Score=319.36 Aligned_cols=221 Identities=25% Similarity=0.372 Sum_probs=180.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
..+..++|++.+.||+|+||.||++.+..+ +..||+|.+... ........+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~- 86 (281)
T 1mp8_A 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 86 (281)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence 345678999999999999999999998654 567999998653 23455677889999999999999999999985
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
++..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence 467899999999999999997653 4599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
..... ........+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.
T Consensus 166 ~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~ 219 (281)
T 1mp8_A 166 MEDST--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219 (281)
T ss_dssp ---------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cCccc--------------------------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCC
Confidence 32110 011223357889999999999999999999999999999996 999999
Q ss_pred CCCHHHHHHHHHcCC
Q 002342 900 GKTRQKTFANILHKD 914 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~ 914 (934)
+.+..+.+..+..+.
T Consensus 220 ~~~~~~~~~~i~~~~ 234 (281)
T 1mp8_A 220 GVKNNDVIGRIENGE 234 (281)
T ss_dssp TCCGGGHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 999888888887764
No 131
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.5e-35 Score=333.57 Aligned_cols=222 Identities=24% Similarity=0.367 Sum_probs=182.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC--CCCccceeEEEEeCCe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTKTH 743 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~~~ 743 (934)
+....|++++.||+|+||.||++.+.. ++.||||++.+... .......+.+|+.+|+.+. ||||+++++++...+.
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~ 130 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE
Confidence 345679999999999999999999854 89999999976432 4556678899999999996 5999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
+|||||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 131 ~~lv~E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 131 IYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEEEEC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEEEec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9999994 589999999875 3589999999999999999999999999999999999995 68999999999965321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCchhHHHHHHHHHHHHH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~s~~~DiwSlG~iL~ell 892 (934)
.. ........+||+.|+|||++.+ ..++.++|||||||+||+|+
T Consensus 207 ~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell 261 (390)
T 2zmd_A 207 DT-------------------------TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261 (390)
T ss_dssp --------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred CC-------------------------ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence 10 0112235579999999999975 46888999999999999999
Q ss_pred hCCCCCCCCC-HHHHHHHHHcCCCCCC
Q 002342 893 YGYTPFRGKT-RQKTFANILHKDLKFP 918 (934)
Q Consensus 893 tG~~Pf~~~~-~~~~~~~i~~~~~~~p 918 (934)
+|++||.+.. ....+..++.....++
T Consensus 262 ~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 262 YGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp HSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred HCCCcchhhhHHHHHHHHHhCccccCC
Confidence 9999998754 3466777776554433
No 132
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.5e-35 Score=327.46 Aligned_cols=222 Identities=25% Similarity=0.324 Sum_probs=186.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------- 740 (934)
.++|++++.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+|+.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 5789999999999999999999999999999999876432 22333567789999999999999999999986
Q ss_pred -CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
.+.+|+|||||. ++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 457899999995 57777776543 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
....... .........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||
T Consensus 173 ~~~~~~~-----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 229 (351)
T 3mi9_A 173 AFSLAKN-----------------------SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229 (351)
T ss_dssp ECCCCSS-----------------------SSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccc-----------------------ccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 5431110 01122345578999999999976 45799999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCC
Q 002342 899 RGKTRQKTFANILHKDL 915 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~ 915 (934)
.+.+....+..+.....
T Consensus 230 ~~~~~~~~~~~i~~~~~ 246 (351)
T 3mi9_A 230 QGNTEQHQLALISQLCG 246 (351)
T ss_dssp CCSSHHHHHHHHHHHHC
T ss_pred CCCChHHHHHHHHHHhC
Confidence 99999988888865433
No 133
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.4e-35 Score=330.83 Aligned_cols=210 Identities=29% Similarity=0.461 Sum_probs=170.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 741 (934)
.++|++++.||+|+||.||+|.+..+|+.||||++... .........+.+|+.+|+.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST-TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 47999999999999999999999999999999998754 23445567788999999999999999999999754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 8999998865 34999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 183 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 183 AD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp --------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 1234579999999999987 6789999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+.+..|.+
T Consensus 233 ~~~~~~l~~i~~ 244 (367)
T 2fst_X 233 TDHIDQLKLILR 244 (367)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999888877765
No 134
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.7e-35 Score=320.24 Aligned_cols=227 Identities=26% Similarity=0.389 Sum_probs=190.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhCCCCCccceeEEEE--eCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~ 744 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.+.... .......+.+|+.+++.++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999999764321 1334567889999999999999999999984 45689
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+.++ |.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999665 777777655567999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC--CchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~--s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
. .........||+.|+|||++.+... +.++|||||||++|+|++|..||.+.+
T Consensus 163 ~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 163 A-------------------------ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp C-------------------------SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred c-------------------------cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 0 0111234569999999999986543 679999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q 002342 903 RQKTFANILHKDLKFPSS 920 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~p~~ 920 (934)
..+.+..+..+.+.+|..
T Consensus 218 ~~~~~~~i~~~~~~~~~~ 235 (305)
T 2wtk_C 218 IYKLFENIGKGSYAIPGD 235 (305)
T ss_dssp HHHHHHHHHHCCCCCCSS
T ss_pred HHHHHHHHhcCCCCCCCc
Confidence 999999999888877754
No 135
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.7e-35 Score=328.03 Aligned_cols=221 Identities=24% Similarity=0.333 Sum_probs=179.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEE----EEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v----AlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
.+..++|++.+.||+|+||.||+|.+..+++.+ |+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 88 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 355688999999999999999999998887755 666665321 23345678899999999999999999999987
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.. .++||||+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 54 789999999999999997753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.
T Consensus 167 ~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 167 LGAEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp HTTTCC--------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCCcc-------------------------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 432111 111223457889999999999999999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC
Q 002342 900 GKTRQKTFANILHKD 914 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~ 914 (934)
+.+...+...+..+.
T Consensus 222 ~~~~~~~~~~~~~~~ 236 (327)
T 3poz_A 222 GIPASEISSILEKGE 236 (327)
T ss_dssp TCCGGGHHHHHHTTC
T ss_pred CCCHHHHHHHHHcCC
Confidence 988888777776554
No 136
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-35 Score=331.22 Aligned_cols=227 Identities=41% Similarity=0.747 Sum_probs=187.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vAlK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~ 740 (934)
+..++|++.+.||+|+||.||+|++. .+++.||||++.+.... .......+.+|+.+|+.+ +||||+++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 130 (355)
T 1vzo_A 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 130 (355)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence 45679999999999999999999995 58999999998754321 122334566799999999 79999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+.+|+|||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 131 ETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999999999764 3599999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.... ........+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||
T Consensus 209 ~~~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf 262 (355)
T 1vzo_A 209 FVAD--------------------------ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262 (355)
T ss_dssp CCGG--------------------------GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccC--------------------------CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 3210 1112234679999999999986 35788999999999999999999999
Q ss_pred CCC----CHHHHHHHHHcCCCCCCCC
Q 002342 899 RGK----TRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 899 ~~~----~~~~~~~~i~~~~~~~p~~ 920 (934)
... ....+.+.+......+|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
T 1vzo_A 263 TVDGEKNSQAEISRRILKSEPPYPQE 288 (355)
T ss_dssp SCTTSCCCHHHHHHHHHHCCCCCCTT
T ss_pred ccCCccchHHHHHHHHhccCCCCCcc
Confidence 753 3456666777776666654
No 137
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-34 Score=315.97 Aligned_cols=224 Identities=29% Similarity=0.444 Sum_probs=194.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc------ChHHHHHHHHHHHHHHhCC-CCCccceeEEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------NRNKVHRACAEREILDMLD-HPFVPALYASFQ 739 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~------~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~ 739 (934)
..++|++.+.||+|+||.||++.+..+++.||||++...... .......+.+|+.+++.+. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 357999999999999999999999999999999999754211 1233466788999999995 999999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
..+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999999999999764 459999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc------CCCCCchhHHHHHHHHHHHHHh
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~s~~~DiwSlG~iL~ellt 893 (934)
..... .......||+.|+|||++. ...++.++||||||+++|+|++
T Consensus 173 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~ 224 (298)
T 1phk_A 173 QLDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224 (298)
T ss_dssp ECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred hcCCC----------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH
Confidence 43211 1123457999999999985 4567889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002342 894 GYTPFRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
|..||.+.+.......+..+.+.++..
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
T 1phk_A 225 GSPPFWHRKQMLMLRMIMSGNYQFGSP 251 (298)
T ss_dssp SSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred CCCCCcCccHHHHHHHHhcCCcccCcc
Confidence 999999999999999999988777653
No 138
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.7e-35 Score=316.99 Aligned_cols=222 Identities=27% Similarity=0.437 Sum_probs=186.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG--CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc--chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 357999999999999999999999999999999987543 233456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 159 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (276)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc--
Confidence 9999999999999754 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCHH-H
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~~~~~-~ 905 (934)
........+||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+.... .
T Consensus 160 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 216 (276)
T 2yex_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (276)
T ss_dssp -----------------------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH
T ss_pred -----------------------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 0112234579999999999988765 67899999999999999999999876553 3
Q ss_pred HHHHHHcCCCCCC
Q 002342 906 TFANILHKDLKFP 918 (934)
Q Consensus 906 ~~~~i~~~~~~~p 918 (934)
.+..+..+...++
T Consensus 217 ~~~~~~~~~~~~~ 229 (276)
T 2yex_A 217 EYSDWKEKKTYLN 229 (276)
T ss_dssp HHHHHHTTCTTST
T ss_pred HHHHhhhcccccC
Confidence 4445554444333
No 139
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.8e-35 Score=326.81 Aligned_cols=223 Identities=23% Similarity=0.340 Sum_probs=174.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
+..++|++.+.||+|+||.||+|.+..++. .||+|++..... .......+.+|+.+++.++||||+++++++....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 456789999999999999999999877765 899999876432 3345678899999999999999999999998766
Q ss_pred eE------EEEEEccCCCCchhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002342 743 HV------CLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 743 ~~------~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl 812 (934)
.. |+||||+.+++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEE
Confidence 55 99999999999999986431 125999999999999999999999999999999999999999999999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 179 ~Dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 233 (323)
T 3qup_A 179 ADFGLSRKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233 (323)
T ss_dssp CCCCC------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred eecccccccccccc-------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHH
Confidence 99999865321110 11122345788999999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCC
Q 002342 893 Y-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
+ |.+||.+.+..+.+..+..+.
T Consensus 234 ~~g~~p~~~~~~~~~~~~~~~~~ 256 (323)
T 3qup_A 234 TRGQTPYAGIENAEIYNYLIGGN 256 (323)
T ss_dssp TTSCCTTTTCCGGGHHHHHHTTC
T ss_pred hCCCCCccccChHHHHHHHhcCC
Confidence 9 999999999998888887765
No 140
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.5e-35 Score=342.14 Aligned_cols=220 Identities=23% Similarity=0.338 Sum_probs=189.5
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++.+.||+|+||.||++.+. ++..||||.++... ...+.+.+|+.+|+.++||||+++++++. ..
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~ 255 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE 255 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence 45677789999999999999999999984 57789999997643 23567889999999999999999999986 56
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+|||||++|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 78999999999999999976433458999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.. .........+++.|+|||++....++.++|||||||+||+|++ |++||.+.
T Consensus 336 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 336 DN--------------------------EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp CH--------------------------HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CC--------------------------ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 10 0011123346889999999998999999999999999999999 99999999
Q ss_pred CHHHHHHHHHcCC
Q 002342 902 TRQKTFANILHKD 914 (934)
Q Consensus 902 ~~~~~~~~i~~~~ 914 (934)
+..+++..+..+.
T Consensus 390 ~~~~~~~~i~~~~ 402 (454)
T 1qcf_A 390 SNPEVIRALERGY 402 (454)
T ss_dssp CHHHHHHHHHHTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999998887753
No 141
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.5e-35 Score=321.70 Aligned_cols=209 Identities=23% Similarity=0.387 Sum_probs=176.3
Q ss_pred cccccCCcccccccccCCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
..+..++|++++.||+|+||.||+++ +..+++.||+|++... .......+.+|+.+|+.++||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 81 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 34667899999999999999999998 5678999999998754 4455677889999999999999999999986
Q ss_pred e--CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 740 T--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 740 ~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
. ...+|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 4 456899999999999999997653 3599999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+........ .........|++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 161 TKVLPQDKE------------------------FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp CC-------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccccCCcc------------------------eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 965432110 01112234578889999999999999999999999999999999999
Q ss_pred CCC
Q 002342 898 FRG 900 (934)
Q Consensus 898 f~~ 900 (934)
|..
T Consensus 217 ~~~ 219 (295)
T 3ugc_A 217 SKS 219 (295)
T ss_dssp TCS
T ss_pred cCC
Confidence 864
No 142
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.8e-35 Score=317.91 Aligned_cols=217 Identities=24% Similarity=0.388 Sum_probs=181.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHH----HHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKV----HRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~----~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+..++|++.+.||+|+||.||++.+..+++.||+|++........... ..+.+|+.+++.++||||+++++++.+.
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 556899999999999999999999999999999999876433222221 6788999999999999999999999766
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCc-----EEEEe
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGH-----VSLTD 814 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~-----vkl~D 814 (934)
. ++||||+++++|.+++... ...+++..+..++.|++.||.|||++| |+||||||+|||++.++. +||+|
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred C--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 5 6999999999999988664 346999999999999999999999999 999999999999988776 99999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh--cCCCCCchhHHHHHHHHHHHHH
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII--AGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l--~~~~~s~~~DiwSlG~iL~ell 892 (934)
||++.... .......||+.|+|||++ ....++.++|||||||++|+|+
T Consensus 173 fg~~~~~~------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~ 222 (287)
T 4f0f_A 173 FGLSQQSV------------------------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222 (287)
T ss_dssp CTTCBCCS------------------------------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHH
T ss_pred CCcccccc------------------------------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHH
Confidence 99985321 112345799999999999 4456788999999999999999
Q ss_pred hCCCCCCCCCHHHH--HHHHHcCCC
Q 002342 893 YGYTPFRGKTRQKT--FANILHKDL 915 (934)
Q Consensus 893 tG~~Pf~~~~~~~~--~~~i~~~~~ 915 (934)
+|+.||.+.+.... ...+.....
T Consensus 223 ~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 223 TGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp HSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred cCCCCCccccccHHHHHHHHhccCC
Confidence 99999987655433 455554443
No 143
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5e-35 Score=344.34 Aligned_cols=221 Identities=22% Similarity=0.321 Sum_probs=193.8
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+...+|++.+.||+|+||.||++.+..++..||||.+.... .....+.+|+.+|+.++||||+++++++....
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 35567788999999999999999999999999999999987642 23567889999999999999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||++|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999999987655679999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
... ........+++.|+|||++.+..++.++|||||||+||+|++ |..||.+.
T Consensus 370 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCC--------------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011123356789999999999999999999999999999998 99999999
Q ss_pred CHHHHHHHHHcC
Q 002342 902 TRQKTFANILHK 913 (934)
Q Consensus 902 ~~~~~~~~i~~~ 913 (934)
+..+++..+..+
T Consensus 424 ~~~~~~~~~~~~ 435 (495)
T 1opk_A 424 DLSQVYELLEKD 435 (495)
T ss_dssp CGGGHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 888888777654
No 144
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.7e-35 Score=328.40 Aligned_cols=227 Identities=23% Similarity=0.363 Sum_probs=191.1
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCe-----EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~ 737 (934)
..+..++|++.+.||+|+||.||++.+..+++ .||+|.+.... .......+.+|+.+++.+ +||||++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 45667899999999999999999999977654 79999987542 344567788999999999 89999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~ 805 (934)
+...+..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence 999999999999999999999987531 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHH
Q 002342 806 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 885 (934)
Q Consensus 806 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG 885 (934)
.++.+||+|||++....... .........||+.|+|||++.+..++.++||||||
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 253 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDS-------------------------NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCT-------------------------TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCeEEECcccccccccccc-------------------------ceeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence 99999999999986432110 01112344678899999999999999999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 002342 886 ILLYEMLY-GYTPFRGKTRQKTFANILHKDLKF 917 (934)
Q Consensus 886 ~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~ 917 (934)
|++|+|++ |.+||.+......+..+.......
T Consensus 254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 286 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCC
T ss_pred HHHHHHHcCCCCCCcccchhHHHHHHHhcCCCC
Confidence 99999998 999999887766666666554443
No 145
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1e-34 Score=318.37 Aligned_cols=216 Identities=25% Similarity=0.418 Sum_probs=184.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++++.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 4689999999999999999999999999999999875421 222335678899999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 156 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--- 156 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC---
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC---
Confidence 99995 79999998765566999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 212 (299)
T 2r3i_A 157 ------------------------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212 (299)
T ss_dssp ------------------------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 11123446899999999998765 78999999999999999999999999998888
Q ss_pred HHHHHc
Q 002342 907 FANILH 912 (934)
Q Consensus 907 ~~~i~~ 912 (934)
+..+.+
T Consensus 213 ~~~~~~ 218 (299)
T 2r3i_A 213 LFRIFR 218 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777765
No 146
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.3e-34 Score=316.23 Aligned_cols=216 Identities=24% Similarity=0.384 Sum_probs=183.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----C
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~ 741 (934)
.....|++.+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.+|+.++||||+++++++.. .
T Consensus 23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (290)
T 1t4h_A 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101 (290)
T ss_dssp TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence 445679999999999999999999999999999999876433 44556788999999999999999999999875 4
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEe-cCCcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~-~~~~vkl~DFG~a 818 (934)
..+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 102 KCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred ceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 6789999999999999999764 45999999999999999999999999 99999999999997 7899999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
..... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||
T Consensus 180 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf 229 (290)
T 1t4h_A 180 TLKRA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp GGCCT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccc-----------------------------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCC
Confidence 53211 11234579999999998875 5899999999999999999999999
Q ss_pred CCCCH-HHHHHHHHcCC
Q 002342 899 RGKTR-QKTFANILHKD 914 (934)
Q Consensus 899 ~~~~~-~~~~~~i~~~~ 914 (934)
.+... ...+..+..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~ 246 (290)
T 1t4h_A 230 SECQNAAQIYRRVTSGV 246 (290)
T ss_dssp TTCSSHHHHHHHHTTTC
T ss_pred CCcCcHHHHHHHHhccC
Confidence 88444 45555555543
No 147
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-35 Score=327.38 Aligned_cols=216 Identities=29% Similarity=0.430 Sum_probs=179.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccC--hHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++....... ......+.+|+.+++.++||||+++++++...+..|
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 478999999999999999999999999999999987542211 112246778999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCC
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~ 825 (934)
+||||++ ++|..++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 89 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~- 165 (346)
T 1ua2_A 89 LVFDFME-TDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP- 165 (346)
T ss_dssp EEEECCS-EEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-
T ss_pred EEEEcCC-CCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-
Confidence 9999996 4888888654 345899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 166 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~ 219 (346)
T 1ua2_A 166 --------------------------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219 (346)
T ss_dssp --------------------------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred --------------------------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 1122345799999999999764 5789999999999999999999999999999
Q ss_pred HHHHHHHc
Q 002342 905 KTFANILH 912 (934)
Q Consensus 905 ~~~~~i~~ 912 (934)
+.+.++..
T Consensus 220 ~~~~~i~~ 227 (346)
T 1ua2_A 220 DQLTRIFE 227 (346)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888865
No 148
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-34 Score=317.77 Aligned_cols=221 Identities=22% Similarity=0.309 Sum_probs=185.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+..++|++.+.||+|+||.||++.+..+++.||+|++.... ....+.+|+.+++.+ +|+|++.+++++......
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~ 81 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN 81 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence 45678999999999999999999999999999999986532 223577899999999 799999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-----EEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~-----vkl~DFG~a~ 819 (934)
|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. +||+|||++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 9999999 999999998653 45999999999999999999999999999999999999987776 9999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
........ ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 160 ~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 219 (298)
T 1csn_A 160 FYRDPVTK--------------------QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 219 (298)
T ss_dssp ESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred cccccccc--------------------ccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence 54321110 0011123456689999999999999999999999999999999999999998
Q ss_pred CC---CHHHHHHHHHcC
Q 002342 900 GK---TRQKTFANILHK 913 (934)
Q Consensus 900 ~~---~~~~~~~~i~~~ 913 (934)
+. .....+..+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 220 GLKAATNKQKYERIGEK 236 (298)
T ss_dssp SCCSCCHHHHHHHHHHH
T ss_pred hhhccccHHHHHHHHhh
Confidence 74 344555555443
No 149
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.4e-35 Score=324.83 Aligned_cols=225 Identities=21% Similarity=0.332 Sum_probs=191.4
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEe-------cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccce
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l 734 (934)
.+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+ +||||+++
T Consensus 29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence 34566789999999999999999999985 457789999987542 345567788999999999 89999999
Q ss_pred eEEEEeCCeEEEEEEccCCCCchhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 002342 735 YASFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (934)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~ 800 (934)
++++...+..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+
T Consensus 107 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186 (334)
T ss_dssp EEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred EEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence 9999999999999999999999999976431 24899999999999999999999999999999999
Q ss_pred CEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhH
Q 002342 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (934)
Q Consensus 801 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~D 880 (934)
|||++.++.+||+|||++........ ........||+.|+|||++.+..++.++|
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 241 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 241 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSS-------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHH
T ss_pred eEEEcCCCCEEEcccccccccccccc-------------------------ccccCCCCcccceeChHHhcCCCcChHHH
Confidence 99999999999999999865321110 01122345788999999999888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q 002342 881 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 881 iwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
||||||++|+|++ |..||.+.+..+++..+..+.
T Consensus 242 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 276 (334)
T 2pvf_A 242 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276 (334)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC
Confidence 9999999999999 999999999998888887765
No 150
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-34 Score=322.52 Aligned_cols=214 Identities=23% Similarity=0.381 Sum_probs=173.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
.++|++.+.||+|+||.||+|+++.+++.||||++.... .......+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 357999999999999999999999999999999997543 3345577899999999999999999999986533
Q ss_pred ----------------------------------------------------eEEEEEEccCCCCchhhhccCCC-CCCC
Q 002342 743 ----------------------------------------------------HVCLITDYCPGGELFLLLDRQPT-KVLK 769 (934)
Q Consensus 743 ----------------------------------------------------~~~lV~E~~~ggsL~~~l~~~~~-~~l~ 769 (934)
+.|+|||||++++|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 48999999999999999976532 3356
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCccccc
Q 002342 770 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 849 (934)
Q Consensus 770 ~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (934)
...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............ ....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~---------------~~~~ 227 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV---------------LTPM 227 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc---------------cccc
Confidence 6678999999999999999999999999999999999999999999999765432111000 0000
Q ss_pred ccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 850 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 850 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..|+
T Consensus 228 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp ----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 1112334568999999999999999999999999999999999998876
No 151
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-34 Score=329.38 Aligned_cols=211 Identities=27% Similarity=0.443 Sum_probs=177.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-----
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----- 740 (934)
...++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+|+.+|+.++||||++++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 345789999999999999999999999999999999875421 22369999999999999999999843
Q ss_pred ---------------------------------CCeEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHH
Q 002342 741 ---------------------------------KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALE 785 (934)
Q Consensus 741 ---------------------------------~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~ 785 (934)
..++++|||||+ ++|.+.+.. .....+++..++.++.||+.||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999996 687777653 23456999999999999999999
Q ss_pred HHHHCCCeecCCCCCCEEEe-cCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCc
Q 002342 786 YLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 864 (934)
Q Consensus 786 yLH~~giiHrDLKp~NILl~-~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 864 (934)
|||++||+||||||+|||++ .++.+||+|||+|...... ......+||+.|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~~~t~~y 207 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------EPSVAYICSRFY 207 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------SCCCCCCCCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------CCCcCcccCCCc
Confidence 99999999999999999998 5889999999999643211 122345789999
Q ss_pred cchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Q 002342 865 IAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 865 ~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~ 912 (934)
+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..|.+
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 256 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ 256 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999875 489999999999999999999999999999888877764
No 152
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.3e-35 Score=335.80 Aligned_cols=220 Identities=33% Similarity=0.521 Sum_probs=177.0
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.+.... .......+.+|+.+|+.++||||+++++++.. .
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 46899999999999999999999999999999999865322 11223357789999999999999999999865 5
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecccCc
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSC 819 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~---~vkl~DFG~a~ 819 (934)
..|+|||||++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred ceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 589999999999999998764 4599999999999999999999999999999999999997544 59999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---CCCCchhHHHHHHHHHHHHHhCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+
T Consensus 291 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~ 342 (419)
T 3i6u_A 291 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342 (419)
T ss_dssp SCC---------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred ecCCC----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 53211 12235679999999999864 567889999999999999999999
Q ss_pred CCCCCCHH-HHHHHHHcCCCCCC
Q 002342 897 PFRGKTRQ-KTFANILHKDLKFP 918 (934)
Q Consensus 897 Pf~~~~~~-~~~~~i~~~~~~~p 918 (934)
||.+.... .....+..+.+.++
T Consensus 343 pf~~~~~~~~~~~~i~~~~~~~~ 365 (419)
T 3i6u_A 343 PFSEHRTQVSLKDQITSGKYNFI 365 (419)
T ss_dssp SSCCCSSSCCHHHHHHTTCCCCC
T ss_pred CCCCCcchHHHHHHHhcCCCCCC
Confidence 99875443 45566667766654
No 153
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.8e-35 Score=328.32 Aligned_cols=223 Identities=26% Similarity=0.473 Sum_probs=194.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChH--------------HHHHHHHHHHHHHhCCCCCc
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------KVHRACAEREILDMLDHPFV 731 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~--------------~~~~~~~E~~il~~l~hp~I 731 (934)
...++|++.+.||+|+||.||+|.+ +++.||+|++......... ....+.+|+.+++.++||||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 4467999999999999999999999 9999999999764322211 12678899999999999999
Q ss_pred cceeEEEEeCCeEEEEEEccCCCCchhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEE
Q 002342 732 PALYASFQTKTHVCLITDYCPGGELFLL------LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLL 804 (934)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~------l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl 804 (934)
+++++++.+.+..|+||||+++++|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+||++
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence 9999999999999999999999999999 665445679999999999999999999999 999999999999999
Q ss_pred ecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCc-hhHHH
Q 002342 805 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTS-AVDWW 882 (934)
Q Consensus 805 ~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~-~~Diw 882 (934)
+.++.+||+|||++...... ......||+.|+|||++.+. .++. ++|||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~ 236 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK-----------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT-----------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHH
T ss_pred cCCCcEEEeccccccccccc-----------------------------cccCCCCCcCccCchhhcCCCCCCcchhhHH
Confidence 99999999999998543210 12345699999999999887 6666 99999
Q ss_pred HHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCCCCC
Q 002342 883 ALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPS 919 (934)
Q Consensus 883 SlG~iL~elltG~~Pf~~~~~-~~~~~~i~~~~~~~p~ 919 (934)
||||++|+|++|.+||.+.+. .+.+..+..+.+.+|.
T Consensus 237 slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~ 274 (348)
T 2pml_X 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPL 274 (348)
T ss_dssp HHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCC
T ss_pred HHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCcc
Confidence 999999999999999998877 7888899888888885
No 154
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.8e-35 Score=324.04 Aligned_cols=226 Identities=19% Similarity=0.258 Sum_probs=186.8
Q ss_pred ccccccCCcccccccccCCcEEEEEEE-----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (934)
-..+..++|++.+.||+|+||.||++. +..++..||+|.+... ........+.+|+.+++.++||||++++++
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 101 (327)
T 2yfx_A 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGV 101 (327)
T ss_dssp SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEE
Confidence 345667899999999999999999999 5567889999998643 234455678899999999999999999999
Q ss_pred EEeCCeEEEEEEccCCCCchhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCc
Q 002342 738 FQTKTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGH 809 (934)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~ 809 (934)
+......|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.
T Consensus 102 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred EcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence 9999999999999999999999976532 34899999999999999999999999999999999999984 446
Q ss_pred EEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHH
Q 002342 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (934)
Q Consensus 810 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ 889 (934)
+||+|||++....... .........||+.|+|||++.+..++.++|||||||++|
T Consensus 182 ~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 236 (327)
T 2yfx_A 182 AKIGDFGMARDIYRAS-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236 (327)
T ss_dssp EEECCCHHHHHHHC-------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred EEECcccccccccccc-------------------------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHH
Confidence 9999999985431110 011223456899999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 890 EMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
+|++ |.+||.+.+..+.+..+..+..
T Consensus 237 ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 237 EIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp HHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 9998 9999999999888888877654
No 155
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-34 Score=311.22 Aligned_cols=220 Identities=23% Similarity=0.372 Sum_probs=190.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
+.++.++|++.+.||+|+||.||++.+. ++..||+|.+.+... ....+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 77 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3466789999999999999999999985 678899999986432 23568899999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 78 ICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp CEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence 999999999999999997653 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
. .........|++.|+|||++.+..++.++||||||+++|+|++ |++||.+.+
T Consensus 157 ~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 157 D--------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp H--------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred c--------------------------cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 0 0011223457889999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHcCCC
Q 002342 903 RQKTFANILHKDL 915 (934)
Q Consensus 903 ~~~~~~~i~~~~~ 915 (934)
..+....+..+..
T Consensus 211 ~~~~~~~i~~~~~ 223 (267)
T 3t9t_A 211 NSEVVEDISTGFR 223 (267)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCc
Confidence 9999988887643
No 156
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=322.11 Aligned_cols=224 Identities=22% Similarity=0.292 Sum_probs=186.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 738 (934)
...+...+|++.+.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+.+++.++||||+++++++
T Consensus 38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 115 (333)
T 1mqb_A 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 115 (333)
T ss_dssp CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 34567789999999999999999999987653 469999987542 344556788999999999999999999999
Q ss_pred EeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
...+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 116 SKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp CSSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred ecCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 9999999999999999999999764 345999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
......... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 195 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 250 (333)
T 1mqb_A 195 RVLEDDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250 (333)
T ss_dssp ----------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred hhhcccccc------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 654221100 011122356889999999999999999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcC
Q 002342 898 FRGKTRQKTFANILHK 913 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~ 913 (934)
|.+.+..+++..+..+
T Consensus 251 f~~~~~~~~~~~~~~~ 266 (333)
T 1mqb_A 251 YWELSNHEVMKAINDG 266 (333)
T ss_dssp TTTCCHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHCC
Confidence 9999998888888765
No 157
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.8e-35 Score=330.26 Aligned_cols=214 Identities=19% Similarity=0.215 Sum_probs=171.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEecC-----CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhCCCCCcc
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVP 732 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vAlK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hp~Iv 732 (934)
+..++|++.+.||+|+||.||+|.+..+ ++.||||++.......... ......|+.+++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 3456899999999999999999999765 5889999987642110000 11223455567778899999
Q ss_pred ceeEEEEeC----CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--c
Q 002342 733 ALYASFQTK----THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--G 806 (934)
Q Consensus 733 ~l~~~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~--~ 806 (934)
++++++... .+.||||||| |++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence 999998764 5689999999 99999999764 35699999999999999999999999999999999999999 8
Q ss_pred CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHH
Q 002342 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (934)
Q Consensus 807 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~ 886 (934)
++.+||+|||++......... ...........+||+.|+|||++.+..++.++|||||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 249 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVH--------------------KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGY 249 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCC--------------------CCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCeEEEEECCcceecccCCcc--------------------cccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHH
Confidence 899999999999654321100 001112234567999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCC
Q 002342 887 LLYEMLYGYTPFRGK 901 (934)
Q Consensus 887 iL~elltG~~Pf~~~ 901 (934)
+||+|++|+.||.+.
T Consensus 250 ~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 250 CMIQWLTGHLPWEDN 264 (364)
T ss_dssp HHHHHHHSCCTTGGG
T ss_pred HHHHHHhCCCCcccc
Confidence 999999999999864
No 158
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=325.36 Aligned_cols=221 Identities=24% Similarity=0.331 Sum_probs=181.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEE----EEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v----AlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
.+..++|++++.||+|+||.||+|.+..+++.+ |+|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 355689999999999999999999998888765 55555432 123345678899999999999999999999987
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.. .++||+|+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 55 789999999999999997653 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.
T Consensus 167 ~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 167 LGAEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp --------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCccc-------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 421110 011223457889999999999999999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC
Q 002342 900 GKTRQKTFANILHKD 914 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~ 914 (934)
+....++...+..+.
T Consensus 222 ~~~~~~~~~~~~~~~ 236 (327)
T 3lzb_A 222 GIPASEISSILEKGE 236 (327)
T ss_dssp TCCGGGHHHHHHTTC
T ss_pred CCCHHHHHHHHHcCC
Confidence 988888877776654
No 159
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-34 Score=321.63 Aligned_cols=227 Identities=16% Similarity=0.241 Sum_probs=193.7
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeE
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~ 736 (934)
..+.+..++|++.+.||+|+||.||+|.+. .+++.||+|.+.... .......+.+|+.+++.++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 344566789999999999999999999987 467899999987542 3445567889999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCchhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
++...+..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence 9999999999999999999999987531 13478999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||++...... ..........||+.|+|||++.+..++.++|||||||++
T Consensus 176 ~~kl~Dfg~~~~~~~~-------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 230 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYET-------------------------DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230 (322)
T ss_dssp CEEECCTTCCCGGGGG-------------------------GCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred eEEECcCccccccccc-------------------------cccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHH
Confidence 9999999998543210 001122344678999999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
|+|++ |.+||.+.+..+....+..+..
T Consensus 231 ~el~~~g~~p~~~~~~~~~~~~~~~~~~ 258 (322)
T 1p4o_A 231 WEIATLAEQPYQGLSNEQVLRFVMEGGL 258 (322)
T ss_dssp HHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred HHHHhcCCCccccCCHHHHHHHHHcCCc
Confidence 99999 9999999999999888887654
No 160
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.8e-35 Score=324.00 Aligned_cols=218 Identities=24% Similarity=0.374 Sum_probs=186.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEE--EEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v--AlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~ 742 (934)
+..++|++.+.||+|+||.||+|.+..++..+ |+|.+... ........+.+|+.+++.+ +||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 55689999999999999999999999999865 99988753 2334456788999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCchhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002342 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~ 808 (934)
..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence 9999999999999999997642 23699999999999999999999999999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 180 ~~kL~Dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 231 (327)
T 1fvr_A 180 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231 (327)
T ss_dssp CEEECCTTCEESSCE----------------------------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred eEEEcccCcCccccc----------------------------cccccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence 999999999853210 0112234578899999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcC
Q 002342 889 YEMLY-GYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (934)
|+|++ |.+||.+.+..+.+..+..+
T Consensus 232 ~ellt~g~~pf~~~~~~~~~~~~~~~ 257 (327)
T 1fvr_A 232 WEIVSLGGTPYCGMTCAELYEKLPQG 257 (327)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred HHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence 99998 99999999999888888765
No 161
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=328.34 Aligned_cols=203 Identities=27% Similarity=0.465 Sum_probs=177.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.+...... .....+.+|+.+|+.++||||++++++|.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 3689999999999999999999999999999999987532221 13345677999999999999999999999999
Q ss_pred eEEEEEEccCCC-CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 743 HVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 743 ~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..++||||+.+| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999999766 999998764 35999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus 181 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 181 ERG----------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CTT----------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCC----------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 211 11234579999999999998877 7899999999999999999999965
No 162
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-34 Score=327.37 Aligned_cols=213 Identities=26% Similarity=0.441 Sum_probs=187.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+.+|+.++||||+++++++...+..
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence 455689999999999999999999999999999999998642 445567789999999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999999765 3499999999999999999999996 999999999999999999999999999843210
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 185 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 185 -----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp -----------------------------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred -----------------------------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 112345799999999999999999999999999999999999999998887
Q ss_pred HHHHHHH
Q 002342 904 QKTFANI 910 (934)
Q Consensus 904 ~~~~~~i 910 (934)
.+....+
T Consensus 236 ~~~~~~~ 242 (360)
T 3eqc_A 236 KELELMF 242 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7655443
No 163
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-34 Score=311.20 Aligned_cols=222 Identities=23% Similarity=0.333 Sum_probs=188.8
Q ss_pred ccccCCccccc-ccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 665 QINLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 665 ~~~~~~y~i~~-~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..++|.+.+ .||+|+||.||++.+. .++..||+|++... ........+.+|+.+++.++||||+++++++ ..
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~ 81 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QA 81 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ES
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cC
Confidence 35567888887 9999999999999864 46889999999764 2455667889999999999999999999999 45
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 6789999999999999998654 345999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||.+
T Consensus 161 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 161 GADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TTCSCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCcce------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 321110 011223457899999999998889999999999999999998 9999999
Q ss_pred CCHHHHHHHHHcCC
Q 002342 901 KTRQKTFANILHKD 914 (934)
Q Consensus 901 ~~~~~~~~~i~~~~ 914 (934)
.+..+....+..+.
T Consensus 217 ~~~~~~~~~i~~~~ 230 (287)
T 1u59_A 217 MKGPEVMAFIEQGK 230 (287)
T ss_dssp CCTHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcCC
Confidence 99888888887765
No 164
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.8e-34 Score=332.31 Aligned_cols=226 Identities=23% Similarity=0.342 Sum_probs=175.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 742 (934)
.++|++++.||+|+||.||+|.+..+++.||||++.+. .........+.+|+.+|+.++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 57899999999999999999999999999999999764 33555667889999999999999999999999766 5
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 104 ELYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CEEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred eEEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 799999999 57999999764 459999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh-cCCCCCchhHHHHHHHHHHHHHh--------
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 893 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~s~~~DiwSlG~iL~ellt-------- 893 (934)
............. ..................+||+.|+|||++ ....++.++|||||||+||+|++
T Consensus 181 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 181 SEKDTNIVNDLEE-----NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp -----------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred ccccccccccccc-----cccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 2211000000000 000000000001234567899999999997 55679999999999999999998
Q ss_pred ---CCCCCCCCC
Q 002342 894 ---GYTPFRGKT 902 (934)
Q Consensus 894 ---G~~Pf~~~~ 902 (934)
|.++|.+.+
T Consensus 256 ~~~~~p~f~g~~ 267 (432)
T 3n9x_A 256 PTNRFPLFPGSS 267 (432)
T ss_dssp GGGCCCSCCCSC
T ss_pred cccccccCCCcc
Confidence 666666654
No 165
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=320.05 Aligned_cols=202 Identities=27% Similarity=0.378 Sum_probs=169.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh-CCCCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~l 746 (934)
.++|++++.||+|+||+||+|.+..+++.||||++..... ..........|+..+.. .+||||+++++++...+.+|+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4689999999999999999999999999999999876433 23333444555555554 499999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 99999 789999887653 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~ 258 (311)
T 3p1a_A 211 --------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG 258 (311)
T ss_dssp ------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH
T ss_pred --------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 11234469999999999986 6899999999999999999997777543
No 166
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.3e-35 Score=315.85 Aligned_cols=221 Identities=24% Similarity=0.353 Sum_probs=189.1
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..+.+..++|++.+.||+|+||.||++.+ .++..||+|.+.... .....+.+|+.+|+.++||||+++++++..
T Consensus 6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 79 (279)
T 1qpc_A 6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79 (279)
T ss_dssp CTTBCCGGGEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhcccCHHhhhheeeecCCCCeEEEEEEE-cCCcEEEEEEecCCc----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-
Confidence 45667778999999999999999999997 457789999987542 124568899999999999999999999874
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 56899999999999999997643335999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
.... ........|++.|+|||++.+..++.++||||||+++|+|++ |.+||.+
T Consensus 160 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 160 EDNE--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp SSSC--------------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCcc--------------------------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 2110 011223457889999999998889999999999999999999 9999999
Q ss_pred CCHHHHHHHHHcCC
Q 002342 901 KTRQKTFANILHKD 914 (934)
Q Consensus 901 ~~~~~~~~~i~~~~ 914 (934)
.+..+.+..+..+.
T Consensus 214 ~~~~~~~~~~~~~~ 227 (279)
T 1qpc_A 214 MTNPEVIQNLERGY 227 (279)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred cCHHHHHHHHhccc
Confidence 99998888887653
No 167
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.4e-34 Score=314.18 Aligned_cols=215 Identities=29% Similarity=0.445 Sum_probs=190.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++++.||+|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999976432 33457788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 99 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 172 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--- 172 (303)
T ss_dssp EECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT---
T ss_pred EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcc---
Confidence 999999999999865 35999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~ 907 (934)
........||+.|+|||++.+..++.++|||||||++|+|++|.+||.........
T Consensus 173 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 228 (303)
T 3a7i_A 173 ------------------------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228 (303)
T ss_dssp ------------------------BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred ------------------------ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence 01123457999999999999999999999999999999999999999998888887
Q ss_pred HHHHcCC
Q 002342 908 ANILHKD 914 (934)
Q Consensus 908 ~~i~~~~ 914 (934)
..+..+.
T Consensus 229 ~~~~~~~ 235 (303)
T 3a7i_A 229 FLIPKNN 235 (303)
T ss_dssp HHHHHSC
T ss_pred HHhhcCC
Confidence 7776654
No 168
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.8e-34 Score=320.21 Aligned_cols=208 Identities=25% Similarity=0.289 Sum_probs=180.3
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||+|+||.||++.+ .+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..|+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 457999999999999999999996 56899999988754 23456678899999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 747 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999997543 235899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
. .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...
T Consensus 193 ~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~ 246 (321)
T 2qkw_B 193 D-------------------------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246 (321)
T ss_dssp S-------------------------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS
T ss_pred c-------------------------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc
Confidence 0 01122345699999999999999999999999999999999999999986543
No 169
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.4e-34 Score=315.63 Aligned_cols=220 Identities=26% Similarity=0.402 Sum_probs=170.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
++..++|++++.||+|+||.||++.+..+++.||+|++.... ........+.++...++.++||||+++++++...+..
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC----CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc-CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 355689999999999999999999999999999999987642 1223333444555567888999999999999999999
Q ss_pred EEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
|+||||++ ++|.+++.. .....+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99999995 588777653 1235699999999999999999999998 9999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh----cCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
... .......||+.|+|||++ .+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 161 VDD----------------------------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp -------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred ccc----------------------------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 211 112234699999999996 566788999999999999999999999
Q ss_pred CCC-CCHHHHHHHHHcCC
Q 002342 898 FRG-KTRQKTFANILHKD 914 (934)
Q Consensus 898 f~~-~~~~~~~~~i~~~~ 914 (934)
|.. ......+..+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~ 230 (290)
T 3fme_A 213 YDSWGTPFQQLKQVVEEP 230 (290)
T ss_dssp SCCCSCHHHHHHHHHHSC
T ss_pred ccccCchHHHHHHHhccC
Confidence 986 44444454444433
No 170
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.9e-35 Score=315.47 Aligned_cols=220 Identities=27% Similarity=0.493 Sum_probs=189.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE--eCCeEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVC 745 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~~ 745 (934)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++. .....|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 4689999999999999999999999999999999986532 3455677889999999999999999999885 467899
Q ss_pred EEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEEEecCCcEEEEecccC
Q 002342 746 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-----iiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+||||+++++|.+++... ....+++..++.++.||+.||.|||++| |+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999998753 2245999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
...... ........||+.|+|||++.+..++.++||||||+++|+|++|.+||
T Consensus 164 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 164 RILNHD---------------------------TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp HHC------------------------------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eeeccc---------------------------cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 543211 00112346899999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCC
Q 002342 899 RGKTRQKTFANILHKDL 915 (934)
Q Consensus 899 ~~~~~~~~~~~i~~~~~ 915 (934)
.+.+..++...+..+.+
T Consensus 217 ~~~~~~~~~~~i~~~~~ 233 (279)
T 2w5a_A 217 TAFSQKELAGKIREGKF 233 (279)
T ss_dssp CCSSHHHHHHHHHHTCC
T ss_pred cccCHHHHHHHHhhccc
Confidence 99999888888888765
No 171
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-34 Score=324.27 Aligned_cols=215 Identities=25% Similarity=0.392 Sum_probs=184.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 742 (934)
.++|++++.||+|+||.||+|.+..+++.||||++... ........+.+|+.+|+.++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 46899999999999999999999999999999998753 2445557788999999999999999999999764 4
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+||||+ +++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 104 ~~~iv~e~~-~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 104 DVYIVQDLM-ETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp CEEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEccc-CcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 789999999 46999998763 49999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
... .........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 180 ~~~------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 180 PDH------------------------DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGG------------------------CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC------------------------CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 110 00111234589999999998765 45899999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002342 902 TRQKTFANILH 912 (934)
Q Consensus 902 ~~~~~~~~i~~ 912 (934)
+..+.+..|..
T Consensus 236 ~~~~~~~~i~~ 246 (364)
T 3qyz_A 236 HYLDQLNHILG 246 (364)
T ss_dssp SGGGHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 88888777753
No 172
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.8e-35 Score=322.76 Aligned_cols=223 Identities=23% Similarity=0.354 Sum_probs=185.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~ 737 (934)
+.+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus 22 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred eecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3456789999999999999999999964 467899999997642 344556788999999999 79999999999
Q ss_pred EEeCC-eEEEEEEccCCCCchhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002342 738 FQTKT-HVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (934)
Q Consensus 738 ~~~~~-~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NI 802 (934)
+...+ .+|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni 179 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence 87654 58999999999999999976532 1289999999999999999999999999999999999
Q ss_pred EEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHH
Q 002342 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (934)
Q Consensus 803 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Diw 882 (934)
+++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 180 l~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~ 234 (316)
T 2xir_A 180 LLSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234 (316)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred EECCCCCEEECCCccccccccCcc-------------------------ceeccCCCcceeecCchhhccccccchhHHH
Confidence 999999999999999865321110 1122345688999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHH-HHHHHcC
Q 002342 883 ALGILLYEMLY-GYTPFRGKTRQKT-FANILHK 913 (934)
Q Consensus 883 SlG~iL~ellt-G~~Pf~~~~~~~~-~~~i~~~ 913 (934)
||||++|+|++ |..||.+...... ...+..+
T Consensus 235 slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~ 267 (316)
T 2xir_A 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267 (316)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcccchhHHHHHHhccC
Confidence 99999999998 9999988765444 4444443
No 173
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-35 Score=332.97 Aligned_cols=219 Identities=27% Similarity=0.428 Sum_probs=184.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC--eE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HV 744 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~ 744 (934)
..++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+|+.++||||+++++++...+ ..
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 35789999999999999999999999999999999975432 223456788999999999999999999998655 78
Q ss_pred EEEEEccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl----~~~~~vkl~DFG~a~ 819 (934)
|+|||||++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999999976422 239999999999999999999999999999999999999 667789999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--------CCCCchhHHHHHHHHHHHH
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--------AGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~s~~~DiwSlG~iL~el 891 (934)
.... .......+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el 216 (396)
T 4eut_A 165 ELED----------------------------DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (396)
T ss_dssp ECCC----------------------------GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EccC----------------------------CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence 4321 111234579999999999865 5667899999999999999
Q ss_pred HhCCCCCCC----CCHHHHHHHHHcCCC
Q 002342 892 LYGYTPFRG----KTRQKTFANILHKDL 915 (934)
Q Consensus 892 ltG~~Pf~~----~~~~~~~~~i~~~~~ 915 (934)
++|+.||.+ ....+++..+..+..
T Consensus 217 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 217 ATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp HHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred HHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 999999974 334566777776543
No 174
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.7e-34 Score=318.96 Aligned_cols=212 Identities=23% Similarity=0.393 Sum_probs=185.1
Q ss_pred ccCCcccccccccCCcEEEEEEEE-ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC------CccceeEEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVEL-CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP------FVPALYASFQ 739 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~-~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp------~Iv~l~~~~~ 739 (934)
..++|++.+.||+|+||.||++.+ ..+++.||+|++... ......+.+|+.+++.++|+ +|+++++++.
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 357999999999999999999998 568999999998643 34456788899999988655 4999999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------------
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------- 806 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~------------- 806 (934)
..++.|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999999 999999998776557999999999999999999999999999999999999987
Q ss_pred ------CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhH
Q 002342 807 ------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (934)
Q Consensus 807 ------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~D 880 (934)
++.+||+|||++..... .....+||+.|+|||++.+..++.++|
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D 216 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDE------------------------------HHSTLVSTRHYRAPEVILALGWSQPCD 216 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTS------------------------------CCCSSCSCGGGCCHHHHTTSCCCTHHH
T ss_pred ccccccCCCceEeeCcccccCcc------------------------------ccccccCCccccChHHhhCCCCCcchh
Confidence 66899999999854211 123457999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Q 002342 881 WWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 881 iwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
||||||++|+|++|.+||.+.+..+.+..+...
T Consensus 217 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 249 (339)
T 1z57_A 217 VWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249 (339)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 999999999999999999998888777666543
No 175
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.4e-36 Score=339.32 Aligned_cols=211 Identities=18% Similarity=0.147 Sum_probs=169.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH---HHhCCCCCcccee-------EE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI---LDMLDHPFVPALY-------AS 737 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i---l~~l~hp~Iv~l~-------~~ 737 (934)
.++|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+ |+.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4689999999999999999999999999999999986544455667788999954 5555899999998 77
Q ss_pred EEeCC-----------------eEEEEEEccCCCCchhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 002342 738 FQTKT-----------------HVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (934)
Q Consensus 738 ~~~~~-----------------~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~yLH~~giiHr 795 (934)
+...+ ..||||||+ +|+|.+++..... ..+++..+..++.||+.||+|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 76554 389999999 7899999976421 123348888899999999999999999999
Q ss_pred CCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC--
Q 002342 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-- 873 (934)
Q Consensus 796 DLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-- 873 (934)
||||+|||++.++.+||+|||+|.... ......+| +.|+|||++.+.
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~------------------------------~~~~~~~g-~~y~aPE~~~~~~~ 279 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG------------------------------ARVVSSVS-RGFEPPELEARRAT 279 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT------------------------------CEEECCCC-TTCCCHHHHHHHTS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC------------------------------CcccCCCC-cCccChhhhccccc
Confidence 999999999999999999999985321 11234578 999999999887
Q ss_pred ---------CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002342 874 ---------GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (934)
Q Consensus 874 ---------~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i 910 (934)
.++.++|||||||+||+|++|++||.+.+....+..+
T Consensus 280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~ 325 (377)
T 3byv_A 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI 325 (377)
T ss_dssp THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG
T ss_pred ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh
Confidence 8999999999999999999999999876654444333
No 176
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.7e-34 Score=312.79 Aligned_cols=223 Identities=22% Similarity=0.329 Sum_probs=175.3
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
...++..++|++.+.||+|+||.||++.+. ..+|+|+++.. .........+.+|+.+|+.++||||++++++. ..
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 91 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 91 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEecc-CCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence 345677889999999999999999999863 35999998764 23456667889999999999999999999965 55
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred CccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccc
Confidence 6789999999999999998654 355999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|+.||
T Consensus 171 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 225 (289)
T 3og7_A 171 SRWS-------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225 (289)
T ss_dssp --------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCc
Confidence 2110 011223457999999999996 667888999999999999999999999
Q ss_pred CCCCHHH-HHHHHHcCCC
Q 002342 899 RGKTRQK-TFANILHKDL 915 (934)
Q Consensus 899 ~~~~~~~-~~~~i~~~~~ 915 (934)
.+....+ ....+..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~ 243 (289)
T 3og7_A 226 SNINNRDQIIEMVGRGSL 243 (289)
T ss_dssp SSCCCHHHHHHHHHHTSC
T ss_pred cccchHHHHHHHhccccc
Confidence 8865554 4444545544
No 177
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7e-35 Score=318.13 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=186.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEec-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~--~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..++|++.+.||+|+||.||++.+.. ++ ..||+|++.............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 4556799999999999999999998754 33 36999998865544556677889999999999999999999999876
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
. .++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred C-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 5 889999999999999987642 45999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
..... .........||+.|+|||++.+..++.++||||||+++|+|++ |.+||.+
T Consensus 172 ~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDD------------------------HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CC------------------------EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccc------------------------chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 22110 0011223467889999999998889999999999999999999 9999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCccc
Q 002342 901 KTRQKTFANILHKDLKFPSSTPSSCKA 927 (934)
Q Consensus 901 ~~~~~~~~~i~~~~~~~p~~~~~s~~~ 927 (934)
.+..+.+..+......+|.....+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (291)
T 1u46_A 228 LNGSQILHKIDKEGERLPRPEDCPQDI 254 (291)
T ss_dssp CCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred CCHHHHHHHHHccCCCCCCCcCcCHHH
Confidence 999999999987766665543334333
No 178
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.4e-34 Score=333.49 Aligned_cols=209 Identities=29% Similarity=0.465 Sum_probs=174.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------~ 741 (934)
..+|++.+.||+|+||.||++.+..+++.||||.+.+.. ....+|+++|+.++||||++++++|.. .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 347999999999999999999999999999999987532 123469999999999999999999853 2
Q ss_pred CeEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-~~vkl~DFG~a 818 (934)
.++++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 35789999995 466666542 223569999999999999999999999999999999999999965 67899999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+..... ......+||+.|+|||++.+. .++.++|||||||+||+|++|++|
T Consensus 205 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 205 KQLVRG----------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp EECCTT----------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccC----------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 643211 112345789999999999765 789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002342 898 FRGKTRQKTFANILH 912 (934)
Q Consensus 898 f~~~~~~~~~~~i~~ 912 (934)
|.+.+..+.+..|++
T Consensus 257 f~~~~~~~~l~~i~~ 271 (420)
T 1j1b_A 257 FPGDSGVDQLVEIIK 271 (420)
T ss_dssp SCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999998877777654
No 179
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.6e-34 Score=313.06 Aligned_cols=223 Identities=22% Similarity=0.313 Sum_probs=186.4
Q ss_pred cccccCCccccc-ccccCCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe
Q 002342 664 EQINLQHFRPIK-PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (934)
Q Consensus 664 ~~~~~~~y~i~~-~LG~G~~g~Vy~a~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (934)
..+..++|++.+ .||+|+||.||++.+ ..+++.||+|++.... ........+.+|+.+++.++||||+++++++ .
T Consensus 11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 345667899998 999999999999955 5567899999997642 2344467789999999999999999999999 5
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 67789999999999999999874 4599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~ 899 (934)
....... ........|++.|+|||++.+..++.++||||||+++|+|++ |+.||.
T Consensus 167 ~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 222 (291)
T 1xbb_A 167 LRADENY------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222 (291)
T ss_dssp CCTTCSE------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred eccCCCc------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCC
Confidence 4221100 011123357889999999998889999999999999999999 999999
Q ss_pred CCCHHHHHHHHHcCC
Q 002342 900 GKTRQKTFANILHKD 914 (934)
Q Consensus 900 ~~~~~~~~~~i~~~~ 914 (934)
+.+..++...+..+.
T Consensus 223 ~~~~~~~~~~~~~~~ 237 (291)
T 1xbb_A 223 GMKGSEVTAMLEKGE 237 (291)
T ss_dssp TCCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHcCC
Confidence 999988888887754
No 180
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8e-35 Score=323.45 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=173.3
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
...+..++|++.+.||+|+||.||++++ .++.||||++... ........+|+.+|+.++||||+++++++....
T Consensus 18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (322)
T 3soc_A 18 NLYFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91 (322)
T ss_dssp CEEETTEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred ccccchhhchhhheecccCceEEEEEEE--CCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence 3446678999999999999999999987 4899999998653 233445566899999999999999999998743
Q ss_pred ----eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeecCCCCCCEEEecCC
Q 002342 743 ----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ----------GIIYRDLKPENVLLQGNG 808 (934)
Q Consensus 743 ----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~----------giiHrDLKp~NILl~~~~ 808 (934)
.+|+|||||++++|.+++... .+++..++.++.||+.||.|||+. ||+||||||+|||++.++
T Consensus 92 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~ 168 (322)
T 3soc_A 92 SVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL 168 (322)
T ss_dssp SSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred CCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence 479999999999999999763 399999999999999999999999 999999999999999999
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-----CCCchhHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWA 883 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~s~~~DiwS 883 (934)
.+||+|||++........ .......+||+.|+|||++.+. .++.++||||
T Consensus 169 ~~kL~DFg~a~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws 223 (322)
T 3soc_A 169 TACIADFGLALKFEAGKS-------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA 223 (322)
T ss_dssp CEEECCCTTCEEECTTSC-------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHH
T ss_pred eEEEccCCcccccccccC-------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHH
Confidence 999999999965432110 1122345799999999999873 4456889999
Q ss_pred HHHHHHHHHhCCCCCCCC
Q 002342 884 LGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 884 lG~iL~elltG~~Pf~~~ 901 (934)
|||++|+|++|++||.+.
T Consensus 224 lG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 224 MGLVLWELASRCTAADGP 241 (322)
T ss_dssp HHHHHHHHHTTBTTSSSC
T ss_pred HHHHHHHHHhCCCCCCCC
Confidence 999999999999999764
No 181
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.9e-34 Score=323.62 Aligned_cols=209 Identities=26% Similarity=0.432 Sum_probs=181.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE---
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV--- 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~--- 744 (934)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 479999999999999999999999999999999997642 3445567788999999999999999999999876654
Q ss_pred ---EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 745 ---CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 745 ---~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
|+||||+ +++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 120 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 120 YDFYLVMPFM-QTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCCEEEEECC-CEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eeEEEEEccc-cccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 9999999 4788887743 3999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 195 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 195 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp -----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 11 1234578999999999987 7889999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+.+..+..
T Consensus 245 ~~~~~~~~~i~~ 256 (371)
T 4exu_A 245 KDYLDQLTQILK 256 (371)
T ss_dssp SSHHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 998888877754
No 182
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.5e-34 Score=321.67 Aligned_cols=220 Identities=27% Similarity=0.416 Sum_probs=180.7
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCccceeEEEEeC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~Iv~l~~~~~~~ 741 (934)
...+..++|++++.||+|+||.||+|.+..+++.||||++..... ......+..|..+ ++.++||||+++++++...
T Consensus 45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~ 122 (340)
T 3an0_A 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 122 (340)
T ss_dssp CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence 345677899999999999999999999999999999999976432 2333455556665 7778999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+..|+||||++ ++|.+++... ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 123 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 123 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp SCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred CcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999996 5998887641 245699999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC----CCCCchhHHHHHHHHHHHHHhC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~~DiwSlG~iL~elltG 894 (934)
..... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 202 ~~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (340)
T 3an0_A 202 GYLVD----------------------------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 253 (340)
T ss_dssp HHHSC----------------------------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred eeccc----------------------------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHC
Confidence 54321 001123469999999999743 4788999999999999999999
Q ss_pred CCCCCC-CCHHHHHHHHHcC
Q 002342 895 YTPFRG-KTRQKTFANILHK 913 (934)
Q Consensus 895 ~~Pf~~-~~~~~~~~~i~~~ 913 (934)
+.||.. ......+..+...
T Consensus 254 ~~p~~~~~~~~~~~~~~~~~ 273 (340)
T 3an0_A 254 RFPYDSWGTPFQQLKQVVEE 273 (340)
T ss_dssp SCSSCCCSCHHHHHHHHHHS
T ss_pred CCCCccccchHHHHHHHhcC
Confidence 999986 3444555555544
No 183
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-34 Score=336.92 Aligned_cols=220 Identities=24% Similarity=0.346 Sum_probs=185.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++.+.||+|+||.||++.+.. +..||||+++.... ..+.+.+|+.+|+.++||||+++++++.. +
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~ 251 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 455677899999999999999999999854 46799999976432 23568899999999999999999999876 6
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+|||||++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 78999999999999999976444569999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
... ........+++.|+|||++.+..++.++|||||||+||+|++ |.+||.+.
T Consensus 332 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 332 DNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCc--------------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011123357889999999999999999999999999999999 99999999
Q ss_pred CHHHHHHHHHcCC
Q 002342 902 TRQKTFANILHKD 914 (934)
Q Consensus 902 ~~~~~~~~i~~~~ 914 (934)
+..+++..+..+.
T Consensus 386 ~~~~~~~~i~~~~ 398 (452)
T 1fmk_A 386 VNREVLDQVERGY 398 (452)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999988887653
No 184
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.8e-33 Score=312.98 Aligned_cols=195 Identities=24% Similarity=0.397 Sum_probs=172.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEe--CCe
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQT--KTH 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~--~~~ 743 (934)
+.++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+|+.+|+.+. ||||+++++++.. ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 457899999999999999999999999999999998753 2356889999999997 9999999999987 678
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-~vkl~DFG~a~~~~ 822 (934)
.++||||+.+++|.+++.. +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++....
T Consensus 108 ~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999998853 89999999999999999999999999999999999999776 89999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||..
T Consensus 183 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 183 PG----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp TT----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CC----------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 11 11234578999999999987 6789999999999999999999999954
No 185
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=316.72 Aligned_cols=214 Identities=29% Similarity=0.461 Sum_probs=181.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+.+|+.+++.++||||+++++++...+..|+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3578999999999999999999999999999999987532 23567889999999999999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
||||+++++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 102 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-- 178 (314)
T ss_dssp EEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--
T ss_pred EeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--
Confidence 99999999999998643 245999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~ 906 (934)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 179 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 233 (314)
T 3com_A 179 -------------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233 (314)
T ss_dssp -------------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred -------------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 1122345799999999999999999999999999999999999999998887776
Q ss_pred HHHHHcC
Q 002342 907 FANILHK 913 (934)
Q Consensus 907 ~~~i~~~ 913 (934)
...+...
T Consensus 234 ~~~~~~~ 240 (314)
T 3com_A 234 IFMIPTN 240 (314)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 6666544
No 186
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.5e-34 Score=316.51 Aligned_cols=224 Identities=24% Similarity=0.315 Sum_probs=181.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 4556899999999999999999998876 56689999987642 2445567789999999999999999999999865
Q ss_pred C-----eEEEEEEccCCCCchhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002342 742 T-----HVCLITDYCPGGELFLLLDR----QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 742 ~-----~~~lV~E~~~ggsL~~~l~~----~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl 812 (934)
+ ..|+||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 4 45999999999999999843 22356999999999999999999999999999999999999999999999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell 892 (934)
+|||++....... .........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 189 ~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 189 ADFGLSKKIYSGD-------------------------YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp CSCSCC-----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred eecCcceeccccc-------------------------ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 9999985432110 001122345788999999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCC
Q 002342 893 Y-GYTPFRGKTRQKTFANILHKD 914 (934)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~ 914 (934)
+ |.+||.+.........+..+.
T Consensus 244 ~~g~~p~~~~~~~~~~~~~~~~~ 266 (313)
T 3brb_A 244 TRGMTPYPGVQNHEMYDYLLHGH 266 (313)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTC
T ss_pred hcCCCCCccCCHHHHHHHHHcCC
Confidence 9 999999999988888887764
No 187
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.4e-34 Score=315.80 Aligned_cols=217 Identities=27% Similarity=0.471 Sum_probs=183.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.+.|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 46899999999999999999999999999999998754 233456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 827 (934)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----- 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL----- 168 (302)
T ss_dssp EECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH-----
T ss_pred EEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccc-----
Confidence 9999999999988653 2459999999999999999999999999999999999999999999999999873210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh-----cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-----~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
..........||+.|+|||++ .+..++.++|||||||++|+|++|.+||.+.+
T Consensus 169 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 169 ----------------------KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp ----------------------HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ----------------------ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 001112345799999999998 36778899999999999999999999999998
Q ss_pred HHHHHHHHHcCCC
Q 002342 903 RQKTFANILHKDL 915 (934)
Q Consensus 903 ~~~~~~~i~~~~~ 915 (934)
....+..+..+..
T Consensus 227 ~~~~~~~~~~~~~ 239 (302)
T 2j7t_A 227 PMRVLLKIAKSDP 239 (302)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHHhccCC
Confidence 8888877776554
No 188
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-34 Score=326.23 Aligned_cols=200 Identities=25% Similarity=0.413 Sum_probs=175.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC--------CCCccceeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--------HPFVPALYASFQ 739 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~--------hp~Iv~l~~~~~ 739 (934)
.++|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+|+.+. ||||++++++|.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 57899999999999999999999999999999998753 345567889999999985 788999999998
Q ss_pred ----eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCC------
Q 002342 740 ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNG------ 808 (934)
Q Consensus 740 ----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~------ 808 (934)
...++|+||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 77777777665556699999999999999999999999 999999999999998775
Q ss_pred -------------------------------------------cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCc
Q 002342 809 -------------------------------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 845 (934)
Q Consensus 809 -------------------------------------------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (934)
.+||+|||++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~---------------------- 248 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK---------------------- 248 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB----------------------
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc----------------------
Confidence 799999999854321
Q ss_pred ccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 846 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 846 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+
T Consensus 249 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 249 --------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp --------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred --------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1223479999999999999999999999999999999999999998755
No 189
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-34 Score=313.34 Aligned_cols=217 Identities=24% Similarity=0.412 Sum_probs=180.8
Q ss_pred cccccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 660 ~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
....+.+..++|++.+.||+|+||.||++.+ +++.||+|++... ...+.+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 84 (278)
T 1byg_A 12 YRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIV 84 (278)
T ss_dssp ---CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEEC
T ss_pred hhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch-----hHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 3455667889999999999999999999987 5889999998753 24467889999999999999999999975
Q ss_pred e-CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 740 T-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 740 ~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
. .+..|+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp CC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred cCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccc
Confidence 4 457899999999999999997653334899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~P 897 (934)
..... ......+++.|+|||++.+..++.++||||||+++|+|++ |.+|
T Consensus 165 ~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 214 (278)
T 1byg_A 165 KEASS------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214 (278)
T ss_dssp -----------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccccc------------------------------cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCC
Confidence 53211 0112357889999999999999999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcC
Q 002342 898 FRGKTRQKTFANILHK 913 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~ 913 (934)
|...+..+....+..+
T Consensus 215 ~~~~~~~~~~~~~~~~ 230 (278)
T 1byg_A 215 YPRIPLKDVVPRVEKG 230 (278)
T ss_dssp CTTSCGGGHHHHHTTT
T ss_pred CCCCCHHHHHHHHhcC
Confidence 9998888888887665
No 190
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.7e-34 Score=315.44 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=174.7
Q ss_pred cccCCcccccccccCCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
+....|++++.||+|+||.||+|. +..+++.||+|++.... .......+.+|+.+|+.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTED 95 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 445679999999999999999999 56789999999987542 233456788999999999999999999999876
Q ss_pred --CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
..+|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 67899999999999999996543 459999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 175 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKE------------------------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCC------------------------EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCc------------------------ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 5432110 0112234568889999999999999999999999999999999998763
No 191
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.5e-34 Score=311.01 Aligned_cols=220 Identities=28% Similarity=0.475 Sum_probs=191.3
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999976533 233456788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecccCcccCCC
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~---~~vkl~DFG~a~~~~~~ 824 (934)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.+ +.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999999988764 359999999999999999999999999999999999999754 46999999998543211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~ 904 (934)
.......||+.|+|||++.+. ++.++||||||+++|+|++|.+||.+.+..
T Consensus 178 ----------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (287)
T 2wei_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (287)
T ss_dssp ----------------------------SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence 111234689999999998764 889999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 002342 905 KTFANILHKDLKFPS 919 (934)
Q Consensus 905 ~~~~~i~~~~~~~p~ 919 (934)
++...+..+.+.++.
T Consensus 229 ~~~~~~~~~~~~~~~ 243 (287)
T 2wei_A 229 DILKRVETGKYAFDL 243 (287)
T ss_dssp HHHHHHHHCCCCCCS
T ss_pred HHHHHHHcCCCCCCc
Confidence 999999988876553
No 192
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.5e-34 Score=311.46 Aligned_cols=220 Identities=24% Similarity=0.312 Sum_probs=185.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..++|++.+.||+|+||.||++.+.. ++..||+|.+.+.. .......+.+|+.+++.++||||+++++++..+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 85 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE 85 (281)
T ss_dssp SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS
T ss_pred eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence 4567899999999999999999999754 34579999987642 344567788999999999999999999998754
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 86 -~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 86 -PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred -CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 5689999999999999997643 45999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||..
T Consensus 164 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 164 EDED--------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp -----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccc--------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 2110 011223457889999999999999999999999999999998 9999998
Q ss_pred CCHHHHHHHHHcCC
Q 002342 901 KTRQKTFANILHKD 914 (934)
Q Consensus 901 ~~~~~~~~~i~~~~ 914 (934)
....+....+..+.
T Consensus 218 ~~~~~~~~~~~~~~ 231 (281)
T 3cc6_A 218 LENKDVIGVLEKGD 231 (281)
T ss_dssp SCGGGHHHHHHHTC
T ss_pred CChHHHHHHHhcCC
Confidence 88888877776654
No 193
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.2e-34 Score=318.35 Aligned_cols=219 Identities=33% Similarity=0.531 Sum_probs=179.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
++|++.+.||+|+||.||+|.+..+++.||||++.+.... .......+.+|+.+|+.++||||+++++++..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 5799999999999999999999999999999998764321 1223345788999999999999999999997765
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEecccCcc
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCL 820 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~a~~ 820 (934)
.|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++..
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 89999999999999998764 45999999999999999999999999999999999999987664 99999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
.... ......+||+.|+|||++. ...++.++|||||||++|+|++|.+|
T Consensus 167 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (322)
T 2ycf_A 167 LGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218 (322)
T ss_dssp CCCC----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccc----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 3210 0112356999999999984 56788999999999999999999999
Q ss_pred CCCCCHH-HHHHHHHcCCCCCC
Q 002342 898 FRGKTRQ-KTFANILHKDLKFP 918 (934)
Q Consensus 898 f~~~~~~-~~~~~i~~~~~~~p 918 (934)
|.+.... .....+..+.+.++
T Consensus 219 f~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T 2ycf_A 219 FSEHRTQVSLKDQITSGKYNFI 240 (322)
T ss_dssp SCSTTCSSCHHHHHHHTCCCCC
T ss_pred CcccchHHHHHHHHHhCccccC
Confidence 9875543 44555666665543
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-34 Score=316.39 Aligned_cols=227 Identities=26% Similarity=0.435 Sum_probs=169.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
+.+..++|++.+.||+|+||.||++.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh--cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence 4466789999999999999999999999999999999886532 22345667889999999999999999999999999
Q ss_pred EEEEEEccCCCCchhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 744 VCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
.|+||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999999864 1234599999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
+........ ...........||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 168 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 168 SAFLATGGD----------------------ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp HHHCC-------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred hheeccCCC----------------------ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 854321100 001112234579999999999976 568899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCC
Q 002342 897 PFRGKTRQKTFANILHKD 914 (934)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~ 914 (934)
||.+......+.....+.
T Consensus 226 pf~~~~~~~~~~~~~~~~ 243 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTLQND 243 (303)
T ss_dssp TTTTSCGGGHHHHHHTSS
T ss_pred CCccCchhhHHHHHhccC
Confidence 999888777666665544
No 195
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.5e-34 Score=319.93 Aligned_cols=212 Identities=23% Similarity=0.372 Sum_probs=181.4
Q ss_pred ccccccCCcccccccccCCcEEEEEEE----EecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEE
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 738 (934)
...+..++|++++.||+|+||.||+++ +..+++.||+|++... .......+.+|+.+++.++||||+++++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 93 (327)
T 3lxl_A 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVS 93 (327)
T ss_dssp CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEE
Confidence 344667899999999999999999999 4678999999998754 345567789999999999999999999998
Q ss_pred E--eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecc
Q 002342 739 Q--TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (934)
Q Consensus 739 ~--~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG 816 (934)
. ....+|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 94 YGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp ECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred ecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccc
Confidence 6 4567999999999999999997642 349999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCC
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~ 896 (934)
++........ .........||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 173 ~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~ 228 (327)
T 3lxl_A 173 LAKLLPLDKD------------------------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228 (327)
T ss_dssp GCEECCTTCS------------------------EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred cceecccCCc------------------------cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence 9965432110 0112234468899999999999989999999999999999999999
Q ss_pred CCCCCC
Q 002342 897 PFRGKT 902 (934)
Q Consensus 897 Pf~~~~ 902 (934)
||....
T Consensus 229 p~~~~~ 234 (327)
T 3lxl_A 229 KSCSPS 234 (327)
T ss_dssp GGGSHH
T ss_pred CCcccc
Confidence 996543
No 196
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8e-34 Score=315.19 Aligned_cols=215 Identities=26% Similarity=0.434 Sum_probs=183.1
Q ss_pred cCCcccccccccCCcEEEEEEEEe-cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCccceeEEEE----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ---- 739 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~---- 739 (934)
.++|++.+.||+|+||.||+|.+. .+++.||+|++...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 478999999999999999999995 67899999998754321 11123455677777665 8999999999987
Q ss_pred -eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 740 -TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 740 -~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
.....++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 5678899999996 69999998765566999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
..... ........||+.|+|||++.+..++.++|||||||++|+|++|++||
T Consensus 168 ~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 219 (326)
T 1blx_A 168 RIYSF----------------------------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219 (326)
T ss_dssp CCCCG----------------------------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccC----------------------------CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 54321 01123457899999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002342 899 RGKTRQKTFANILH 912 (934)
Q Consensus 899 ~~~~~~~~~~~i~~ 912 (934)
.+.+..+.+..+..
T Consensus 220 ~~~~~~~~~~~i~~ 233 (326)
T 1blx_A 220 RGSSDVDQLGKILD 233 (326)
T ss_dssp CCSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999888887764
No 197
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-33 Score=309.25 Aligned_cols=224 Identities=19% Similarity=0.255 Sum_probs=185.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEE-EeCCe
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-~~~~~ 743 (934)
...|++.+.||+|+||.||++.+..+ ...+|+|.+... ........+.+|+.+++.++||||+++++++ ..++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 45799999999999999999997543 346899998753 3455667889999999999999999999985 45678
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~ 823 (934)
.|+||||+++++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 89999999999999999764 35589999999999999999999999999999999999999999999999999965421
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~ 902 (934)
... ..........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 181 ~~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 237 (298)
T 3f66_A 181 KEY-----------------------YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237 (298)
T ss_dssp GGG-----------------------CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred cch-----------------------hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC
Confidence 110 01122234568899999999999999999999999999999999 888898888
Q ss_pred HHHHHHHHHcCCCCC
Q 002342 903 RQKTFANILHKDLKF 917 (934)
Q Consensus 903 ~~~~~~~i~~~~~~~ 917 (934)
..+....+..+....
T Consensus 238 ~~~~~~~~~~~~~~~ 252 (298)
T 3f66_A 238 TFDITVYLLQGRRLL 252 (298)
T ss_dssp TTTHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCCCC
Confidence 888888887766543
No 198
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=310.62 Aligned_cols=215 Identities=25% Similarity=0.395 Sum_probs=177.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE--------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-------- 739 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 739 (934)
.++|++++.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 57899999999999999999999999999999998753 4556678889999999999999999999873
Q ss_pred ------eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEE
Q 002342 740 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSL 812 (934)
Q Consensus 740 ------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-~~~~vkl 812 (934)
.....|+||||+. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence 3468899999995 699999864 3489999999999999999999999999999999999997 4679999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~el 891 (934)
+|||++........ .........||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 163 ~Dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el 218 (320)
T 2i6l_A 163 GDFGLARIMDPHYS------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218 (320)
T ss_dssp CCCTTCBCC--------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred ccCccccccCCCcc------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHH
Confidence 99999865321100 0112234468999999999876 6788999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcC
Q 002342 892 LYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
++|+.||.+.+..+.+..+...
T Consensus 219 ~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 219 LTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999999988888877653
No 199
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-33 Score=309.99 Aligned_cols=220 Identities=21% Similarity=0.263 Sum_probs=184.3
Q ss_pred CCcccccccccCCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE-
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV- 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~- 744 (934)
-.|.+.+.||+|+||.||++.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++.+.+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 357778999999999999999866554 7999998753 3455667888999999999999999999999876655
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
++||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 99 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999999764 356899999999999999999999999999999999999999999999999999643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
. ...........||+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+.
T Consensus 178 ~-----------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~ 234 (298)
T 3pls_A 178 E-----------------------YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234 (298)
T ss_dssp G-----------------------GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred c-----------------------ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH
Confidence 0 001122334578999999999999999999999999999999999 6777777777
Q ss_pred HHHHHHHHcCC
Q 002342 904 QKTFANILHKD 914 (934)
Q Consensus 904 ~~~~~~i~~~~ 914 (934)
.+....+..+.
T Consensus 235 ~~~~~~~~~~~ 245 (298)
T 3pls_A 235 FDLTHFLAQGR 245 (298)
T ss_dssp GGHHHHHHTTC
T ss_pred HHHHHHhhcCC
Confidence 77777776654
No 200
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=317.63 Aligned_cols=209 Identities=26% Similarity=0.430 Sum_probs=180.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~---- 743 (934)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 478999999999999999999999999999999997642 344556778899999999999999999999987653
Q ss_pred --EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
.|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999995 788888743 3999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+
T Consensus 177 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 177 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp -------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CC------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123478999999999987 6788999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002342 901 KTRQKTFANILH 912 (934)
Q Consensus 901 ~~~~~~~~~i~~ 912 (934)
.+..+.+..+..
T Consensus 227 ~~~~~~~~~i~~ 238 (353)
T 3coi_A 227 KDYLDQLTQILK 238 (353)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 988877777654
No 201
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-33 Score=317.17 Aligned_cols=217 Identities=23% Similarity=0.356 Sum_probs=185.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC------ccceeEEEE
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF------VPALYASFQ 739 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~------Iv~l~~~~~ 739 (934)
..++|++.+.||+|+||.||+|.+..++ ..||+|++... ......+.+|+.+++.+.|++ ++.+++++.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3579999999999999999999998776 79999998753 344567788999999987655 899999999
Q ss_pred eCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---------------
Q 002342 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--------------- 804 (934)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl--------------- 804 (934)
..++.|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999999999 7788888776655569999999999999999999999999999999999999
Q ss_pred ----ecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhH
Q 002342 805 ----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (934)
Q Consensus 805 ----~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~D 880 (934)
+.++.+||+|||++..... .....+||+.|+|||++.+..++.++|
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHE------------------------------HHTTIVATRHYRPPEVILELGWAQPCD 221 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTS------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHH
T ss_pred cccccCCCcEEEeecCccccccc------------------------------cccCCcCCCcccCCeeeecCCCCCccc
Confidence 6678999999999854211 123457999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 881 WWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 881 iwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
||||||++|+|++|.+||.+.+..+.+..+......+|
T Consensus 222 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p 259 (355)
T 2eu9_A 222 VWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 259 (355)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence 99999999999999999999888877766654333333
No 202
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=323.79 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=174.0
Q ss_pred cCCcccccccccCCcEEEEEEEEec--------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccc------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA------ 733 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~--------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~------ 733 (934)
.++|++.+.||+|+||.||+|.+.. +++.||+|++.+. ..+.+|+.+++.++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 4799999999999999999999987 4889999998754 35778999999999998887
Q ss_pred ---------eeEEEEe-CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002342 734 ---------LYASFQT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 803 (934)
Q Consensus 734 ---------l~~~~~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NIL 803 (934)
+++++.. ....|+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6777776 78899999999 999999998764456999999999999999999999999999999999999
Q ss_pred EecCC--cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHH
Q 002342 804 LQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (934)
Q Consensus 804 l~~~~--~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~Di 881 (934)
++.++ .+||+|||++......... ............||+.|+|||++.+..++.++||
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 251 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKH--------------------VAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDL 251 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCC--------------------CCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCcc--------------------ccccccccccccCCccccCHHHHccCCCCchhhH
Confidence 99988 8999999999654321100 0001112244589999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCC
Q 002342 882 WALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 882 wSlG~iL~elltG~~Pf~~~~ 902 (934)
|||||+||+|++|+.||.+..
T Consensus 252 ~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 252 QSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp HHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHHHHHHHHHhCCCCcccCC
Confidence 999999999999999998764
No 203
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-33 Score=321.77 Aligned_cols=211 Identities=25% Similarity=0.426 Sum_probs=184.8
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CC-----CccceeEEEEeC
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HP-----FVPALYASFQTK 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp-----~Iv~l~~~~~~~ 741 (934)
.++|++.+.||+|+||.||+|.+..+++.||||++... ......+..|+.+++.+. |+ +|+.+++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 57999999999999999999999999999999998743 344566778999988885 54 499999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEEe--cCCcEEEEeccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQ--GNGHVSLTDFDL 817 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH--~~giiHrDLKp~NILl~--~~~~vkl~DFG~ 817 (934)
+..|+||||+ +++|.+++.......+++..++.++.||+.||.||| +.||+||||||+|||++ .++.+||+|||+
T Consensus 129 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 129 NHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999999 569999998765566999999999999999999999 57999999999999995 467899999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+..... .....+||+.|+|||++.+..++.++|||||||++|+|++|++|
T Consensus 208 a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 208 SCQLGQ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp CEETTC------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ceeccc------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 854321 12245799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcC
Q 002342 898 FRGKTRQKTFANILHK 913 (934)
Q Consensus 898 f~~~~~~~~~~~i~~~ 913 (934)
|.+.+..+.+..|...
T Consensus 258 f~~~~~~~~~~~i~~~ 273 (382)
T 2vx3_A 258 FSGANEVDQMNKIVEV 273 (382)
T ss_dssp SCCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 9999999888888753
No 204
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.5e-33 Score=316.81 Aligned_cols=221 Identities=23% Similarity=0.355 Sum_probs=182.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC-----C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 742 (934)
.++|++.+.||+|+||.||++.+..+++.||||++... ........+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 47899999999999999999999999999999998643 2445556788999999999999999999988754 6
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
..|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 7899999994 799998876 349999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
........ ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 164 ~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 164 ESAADNSE-----------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC-----------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 21110000 0001112235689999999999865 77899999999999999999999999999
Q ss_pred CHHHHHHHHH
Q 002342 902 TRQKTFANIL 911 (934)
Q Consensus 902 ~~~~~~~~i~ 911 (934)
+..+.+..+.
T Consensus 227 ~~~~~~~~~~ 236 (353)
T 2b9h_A 227 DYRHQLLLIF 236 (353)
T ss_dssp SHHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 8877766654
No 205
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=339.38 Aligned_cols=226 Identities=23% Similarity=0.348 Sum_probs=185.4
Q ss_pred cccCCccccc-ccccCCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 666 INLQHFRPIK-PLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 666 ~~~~~y~i~~-~LG~G~~g~Vy~a~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
+..+.|.+.+ .||+|+||.||++.+.. ++..||||++++.. .......+.+|+.+|+.++||||+++++++.. +
T Consensus 332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 3445566666 79999999999998863 56789999997642 33455778999999999999999999999976 5
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||++|+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred CeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 699999999999999999754 3459999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
..... ........+++.|+|||++.+..++.++|||||||+||||++ |+.||.+.
T Consensus 488 ~~~~~------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 488 ADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp --------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCce------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 11100 011122346789999999999999999999999999999998 99999999
Q ss_pred CHHHHHHHHHcCC-CCCCC
Q 002342 902 TRQKTFANILHKD-LKFPS 919 (934)
Q Consensus 902 ~~~~~~~~i~~~~-~~~p~ 919 (934)
+..+++..|..+. +.+|.
T Consensus 544 ~~~~~~~~i~~~~~~~~p~ 562 (613)
T 2ozo_A 544 KGPEVMAFIEQGKRMECPP 562 (613)
T ss_dssp CSHHHHHHHHTTCCCCCCT
T ss_pred CHHHHHHHHHcCCCCCCCC
Confidence 9999999988765 34444
No 206
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.9e-34 Score=308.63 Aligned_cols=213 Identities=21% Similarity=0.310 Sum_probs=178.6
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~l 746 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.++..+ +||||+++++++...+..|+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3679999999999999999999999999999999986533 334456788899999999 99999999999999999999
Q ss_pred EEEccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-----------------
Q 002342 747 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----------------- 807 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~----------------- 807 (934)
||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999999997531 1458999999999999999999999999999999999999844
Q ss_pred --CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHH
Q 002342 808 --GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (934)
Q Consensus 808 --~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSl 884 (934)
..+||+|||++..... .....||+.|+|||++.+. .++.++|||||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISS-------------------------------PQVEEGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -CCCEEECCCTTCEETTC-------------------------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred CceEEEEcccccccccCC-------------------------------ccccCCCccccChhHhcCCCCCCchhhHHHH
Confidence 4799999999854321 1123589999999999876 55679999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Q 002342 885 GILLYEMLYGYTPFRGKTRQKTFANILHKDL 915 (934)
Q Consensus 885 G~iL~elltG~~Pf~~~~~~~~~~~i~~~~~ 915 (934)
||++|+|++|.+||.... ....+..+.+
T Consensus 218 G~il~~l~~~~~~~~~~~---~~~~~~~~~~ 245 (289)
T 1x8b_A 218 ALTVVCAAGAEPLPRNGD---QWHEIRQGRL 245 (289)
T ss_dssp HHHHHHHTTCCCCCSSSH---HHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCcchh---HHHHHHcCCC
Confidence 999999999998885443 3445555544
No 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.2e-34 Score=340.56 Aligned_cols=220 Identities=24% Similarity=0.346 Sum_probs=189.0
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (934)
.+.+..++|++.+.||+|+||.||++.+.. +..||||+++.... ..+.+.+|+.+|+.++||||+++++++.. .
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~ 334 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c
Confidence 455777899999999999999999999854 46799999976432 23568899999999999999999999876 6
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.+|||||||.+++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 78999999999999999976434569999999999999999999999999999999999999999999999999996432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~ 901 (934)
.. .........+++.|+|||++.+..++.++|||||||+||+|++ |+.||.+.
T Consensus 415 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 415 DN--------------------------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp CH--------------------------HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CC--------------------------ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 0011123357889999999999999999999999999999999 99999999
Q ss_pred CHHHHHHHHHcCC
Q 002342 902 TRQKTFANILHKD 914 (934)
Q Consensus 902 ~~~~~~~~i~~~~ 914 (934)
...+++..+..+.
T Consensus 469 ~~~~~~~~i~~~~ 481 (535)
T 2h8h_A 469 VNREVLDQVERGY 481 (535)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999998887653
No 208
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.9e-33 Score=307.59 Aligned_cols=223 Identities=21% Similarity=0.280 Sum_probs=180.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEE-EeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-~~~~~~~l 746 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++..... ...+.+|+.+++.+.|++++..+..+ ...+..|+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 4789999999999999999999999999999999875422 23578899999999988765555544 67788899
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~---~~~~vkl~DFG~a~~~~~ 823 (934)
||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99999 999999997542 4599999999999999999999999999999999999994 788999999999965432
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~- 902 (934)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccc--------------------cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 2110 0011123346689999999999999999999999999999999999999998733
Q ss_pred --HHHHHHHHHcCCCCC
Q 002342 903 --RQKTFANILHKDLKF 917 (934)
Q Consensus 903 --~~~~~~~i~~~~~~~ 917 (934)
..+.+..+..+.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 221 ATKRQKYERISEKKMST 237 (296)
T ss_dssp SSSSSHHHHHHHHHHHS
T ss_pred hhhhhhhhhhcccccCC
Confidence 233444444443333
No 209
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-33 Score=322.10 Aligned_cols=208 Identities=26% Similarity=0.454 Sum_probs=171.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC-----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 742 (934)
..+|++.+.||+|+||.||+|++..++. +|+|.+..... ...+|+.+|+.++||||++++++|...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 4679999999999999999999977766 77887654321 1236999999999999999999996433
Q ss_pred -eEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecccC
Q 002342 743 -HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-~~~~vkl~DFG~a 818 (934)
++|+|||||+++ +...+.. .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|
T Consensus 111 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 111 VFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 488999999654 4433321 1235699999999999999999999999999999999999999 7899999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 190 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 241 (394)
T 4e7w_A 190 KILIAG----------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241 (394)
T ss_dssp EECCTT----------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccCC----------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 653211 112345789999999999765 589999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002342 898 FRGKTRQKTFANILH 912 (934)
Q Consensus 898 f~~~~~~~~~~~i~~ 912 (934)
|.+.+..+.+..|.+
T Consensus 242 f~~~~~~~~l~~i~~ 256 (394)
T 4e7w_A 242 FPGESGIDQLVEIIK 256 (394)
T ss_dssp SCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 999998888777754
No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-33 Score=317.38 Aligned_cols=214 Identities=25% Similarity=0.402 Sum_probs=176.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc--------cChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------LNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~--------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.++|++.+.||+|+||.||++.+.. ++.||||.+..... ........+.+|+.+|+.++||||+++++++.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 5789999999999999999999854 89999999865322 22334578899999999999999999999985
Q ss_pred e-----CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEe
Q 002342 740 T-----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 740 ~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~D 814 (934)
. ...+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence 3 347899999995 7888888754 34699999999999999999999999999999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-CCCCchhHHHHHHHHHHHHHh
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~~DiwSlG~iL~ellt 893 (934)
||++..... .......+||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 178 fg~~~~~~~----------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 229 (362)
T 3pg1_A 178 FNLAREDTA----------------------------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229 (362)
T ss_dssp TTC-------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred cCccccccc----------------------------ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh
Confidence 999853211 111234578999999999987 678999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHc
Q 002342 894 GYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~ 912 (934)
|++||.+.+..+.+..+..
T Consensus 230 g~~pf~~~~~~~~~~~i~~ 248 (362)
T 3pg1_A 230 RKALFRGSTFYNQLNKIVE 248 (362)
T ss_dssp SSCSCCCSSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 9999999998888877754
No 211
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.7e-34 Score=317.84 Aligned_cols=212 Identities=19% Similarity=0.183 Sum_probs=170.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEec---CCeEEEEEEeecccccChH--------HHHHHHHHHHHHHhCCCCCccce
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRN--------KVHRACAEREILDMLDHPFVPAL 734 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vAlK~~~~~~~~~~~--------~~~~~~~E~~il~~l~hp~Iv~l 734 (934)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++......... ....+.+|+.+++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 345789999999999999999999987 7889999998764211101 11235578889999999999999
Q ss_pred eEEEEe----CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--
Q 002342 735 YASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (934)
Q Consensus 735 ~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-- 808 (934)
++++.. ....|+||||| +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 999987 78899999999 999999997653 699999999999999999999999999999999999999877
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL 888 (934)
.+||+|||++......... ............||+.|+|||++.+..++.++|||||||++
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 250 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNH--------------------KQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250 (345)
T ss_dssp SEEECCCTTCEESSGGGCC--------------------CCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred cEEEEeCCCceeccccccc--------------------ccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 9999999999654321100 00011122456899999999999999999999999999999
Q ss_pred HHHHhCCCCCCC
Q 002342 889 YEMLYGYTPFRG 900 (934)
Q Consensus 889 ~elltG~~Pf~~ 900 (934)
|+|++|+.||.+
T Consensus 251 ~ell~g~~pf~~ 262 (345)
T 2v62_A 251 LRWLCGKLPWEQ 262 (345)
T ss_dssp HHHHHSSCTTGG
T ss_pred HHHHhCCCCccc
Confidence 999999999965
No 212
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1e-33 Score=307.53 Aligned_cols=209 Identities=23% Similarity=0.364 Sum_probs=178.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-------
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------- 740 (934)
..+|++++.||+|+||.||++.+..+++.||+|.+.... ..+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 367999999999999999999999899999999987542 246689999999999999999999864
Q ss_pred ---------CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002342 741 ---------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 741 ---------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vk 811 (934)
...+|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 45689999999999999999765455699999999999999999999999999999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~el 891 (934)
|+|||++...... .......||+.|+|||++.+..++.++||||||+++|+|
T Consensus 163 l~Dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 214 (284)
T 2a19_B 163 IGDFGLVTSLKND----------------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214 (284)
T ss_dssp ECCCTTCEESSCC----------------------------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHH
T ss_pred ECcchhheecccc----------------------------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHH
Confidence 9999998543211 112234699999999999999999999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcC
Q 002342 892 LYGYTPFRGKTRQKTFANILHK 913 (934)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~ 913 (934)
++|..||.. .......+..+
T Consensus 215 ~~~~~~~~~--~~~~~~~~~~~ 234 (284)
T 2a19_B 215 LHVCDTAFE--TSKFFTDLRDG 234 (284)
T ss_dssp HSCCSSHHH--HHHHHHHHHTT
T ss_pred HhcCCcchh--HHHHHHHhhcc
Confidence 999999853 23334444443
No 213
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-33 Score=316.24 Aligned_cols=217 Identities=25% Similarity=0.407 Sum_probs=152.7
Q ss_pred ccCCccccc-ccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe----C
Q 002342 667 NLQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 741 (934)
Q Consensus 667 ~~~~y~i~~-~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----~ 741 (934)
..++|.+.+ .||+|+||.||++.+..+++.||||++... .. ........++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PK---ARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 357899966 599999999999999999999999998753 11 12223334667799999999999976 5
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a 818 (934)
..+|+|||||+|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 56899999999999999998776567999999999999999999999999999999999999976 445999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
..... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 179 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 179 KETTQ-----------------------------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp EEC---------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eeccc-----------------------------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 54321 1123457899999999999888999999999999999999999999
Q ss_pred CCCCHHHH----HHHHHcCCCCCCC
Q 002342 899 RGKTRQKT----FANILHKDLKFPS 919 (934)
Q Consensus 899 ~~~~~~~~----~~~i~~~~~~~p~ 919 (934)
.+...... ...+..+.+.+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFPN 254 (336)
T ss_dssp ---------------------CCCT
T ss_pred CCccchhhhhhHHHhhhccccccCc
Confidence 87665543 3344444444443
No 214
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.1e-34 Score=317.85 Aligned_cols=206 Identities=26% Similarity=0.334 Sum_probs=176.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeE
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 744 (934)
.+..++|.+.+.||+|+||.||++.+ .+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccC--chHHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 34568999999999999999999985 4689999999876432 11223578899999999999999999999999999
Q ss_pred EEEEEccCCCCchhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~yLH~~---giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
++||||+++++|.+++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999999997643 23499999999999999999999999 99999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 183 LMDYKD--------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp ECCSSS--------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred ccCccc--------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 542111 112234569999999999998889999999999999999999999995
No 215
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-33 Score=339.40 Aligned_cols=217 Identities=23% Similarity=0.339 Sum_probs=180.6
Q ss_pred cccccCCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEEEEccC
Q 002342 675 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 752 (934)
+.||+|+||.||++.+ ..+++.||||+++... ........+.+|+.+|+.++||||+++++++.. +..+||||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999965 4567899999997642 344456789999999999999999999999975 56899999999
Q ss_pred CCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
+++|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.......
T Consensus 453 ~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~------ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------ 524 (635)
T ss_dssp TEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc------
Confidence 99999999764 4599999999999999999999999999999999999999999999999999965432110
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~ 911 (934)
.........||+.|+|||++.+..++.++|||||||+||+|++ |+.||.+.+..++...+.
T Consensus 525 ------------------~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~ 586 (635)
T 4fl3_A 525 ------------------YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586 (635)
T ss_dssp ----------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred ------------------ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 0011223457889999999999999999999999999999998 999999999999998888
Q ss_pred cCCC-CCCC
Q 002342 912 HKDL-KFPS 919 (934)
Q Consensus 912 ~~~~-~~p~ 919 (934)
.+.. .+|.
T Consensus 587 ~~~~~~~p~ 595 (635)
T 4fl3_A 587 KGERMGCPA 595 (635)
T ss_dssp TTCCCCCCT
T ss_pred cCCCCCCCC
Confidence 7653 4443
No 216
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.4e-34 Score=315.63 Aligned_cols=235 Identities=25% Similarity=0.359 Sum_probs=165.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEE---
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQ--- 739 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~--- 739 (934)
..+...+|++.+.||+|+||.||++.+..+++.||+|++.+. .......+.+|+.+++.+. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence 345567899999999999999999999999999999998653 4455667889999999995 999999999994
Q ss_pred -----eCCeEEEEEEccCCCCchhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEE
Q 002342 740 -----TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVS 811 (934)
Q Consensus 740 -----~~~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~~~~i~~qil~aL~yLH~~g--iiHrDLKp~NILl~~~~~vk 811 (934)
....+++||||+ +|+|.+++.. .....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|
T Consensus 100 ~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 100 EESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred cccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence 345689999999 5799888864 22345999999999999999999999999 99999999999999999999
Q ss_pred EEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh---cCCCCCchhHHHHHHHHH
Q 002342 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILL 888 (934)
Q Consensus 812 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~s~~~DiwSlG~iL 888 (934)
|+|||++............. ............+||+.|+|||++ .+..++.++|||||||++
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il 243 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSA---------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243 (337)
T ss_dssp BCCCTTCBCCSSCC----------------------------------------------CCTTSCSSHHHHHHHHHHHH
T ss_pred EecCccceeccccCcccccc---------------cccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHH
Confidence 99999997654321110000 000001122355799999999999 566788899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 002342 889 YEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 921 (934)
Q Consensus 889 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 921 (934)
|+|++|+.||.+..... +..+.+.+|...
T Consensus 244 ~el~~g~~p~~~~~~~~----~~~~~~~~~~~~ 272 (337)
T 3ll6_A 244 YLLCFRQHPFEDGAKLR----IVNGKYSIPPHD 272 (337)
T ss_dssp HHHHHSSCCC----------------CCCCTTC
T ss_pred HHHHhCCCCCcchhHHH----hhcCcccCCccc
Confidence 99999999997655543 334444444433
No 217
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=8.4e-34 Score=314.55 Aligned_cols=207 Identities=26% Similarity=0.362 Sum_probs=174.4
Q ss_pred cccCCcccccccccCCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe-
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 740 (934)
+....|++++.||+|+||.||++.. ..+++.||||++... ........+.+|+.+|+.++||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence 3334459999999999999988754 457899999999864 244556778999999999999999999999987
Q ss_pred -CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
...+|+||||+++++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence 46889999999999999999764 39999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 183 AVPEGHE------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp ECCTTCS------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccccccc------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 5432110 0112234468889999999999899999999999999999999999997
Q ss_pred CC
Q 002342 900 GK 901 (934)
Q Consensus 900 ~~ 901 (934)
..
T Consensus 239 ~~ 240 (318)
T 3lxp_A 239 SP 240 (318)
T ss_dssp SH
T ss_pred cc
Confidence 53
No 218
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=319.73 Aligned_cols=215 Identities=27% Similarity=0.408 Sum_probs=175.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE----e
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----T 740 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~----~ 740 (934)
.+..++|++.+.||+|+||.||++.+..+++.||+|++... .......+.+|+.+++.++||||+++++++. .
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA 101 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence 34567899999999999999999999999999999998653 4456677889999999999999999999987 3
Q ss_pred CCeEEEEEEccCCCCchhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccC
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a 818 (934)
....|+||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 45789999999999999998752 2356999999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC---CCchhHHHHHHHHHHHHHhCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~s~~~DiwSlG~iL~elltG~ 895 (934)
......... .. ............||+.|+|||++.+.. ++.++|||||||++|+|++|+
T Consensus 182 ~~~~~~~~~-----~~-------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 243 (317)
T 2buj_A 182 NQACIHVEG-----SR-------------QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243 (317)
T ss_dssp EESCEEEES-----HH-------------HHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSS
T ss_pred hhccccccc-----cc-------------ccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 543210000 00 000001112346899999999997654 688999999999999999999
Q ss_pred CCCCC
Q 002342 896 TPFRG 900 (934)
Q Consensus 896 ~Pf~~ 900 (934)
.||..
T Consensus 244 ~p~~~ 248 (317)
T 2buj_A 244 GPYDM 248 (317)
T ss_dssp CTTHH
T ss_pred CChhh
Confidence 99964
No 219
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-33 Score=316.62 Aligned_cols=213 Identities=25% Similarity=0.401 Sum_probs=167.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCC----
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~---- 742 (934)
..++|++.+.||+|+||.||++.+..+++.||||++.... .......+++..++.++||||++++++|...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 3579999999999999999999999999999999986542 22234567888889999999999999997533
Q ss_pred ---eEEEEEEccCCCCchhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEEec-CCcEEEEe
Q 002342 743 ---HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQG-NGHVSLTD 814 (934)
Q Consensus 743 ---~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~yLH--~~giiHrDLKp~NILl~~-~~~vkl~D 814 (934)
++|+||||+.+ +|...+.. .....+++..++.++.||+.||.||| ++||+||||||+|||++. ++.+||+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 38999999965 55444332 23456899999999999999999999 999999999999999997 89999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC-CCchhHHHHHHHHHHHHHh
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~~DiwSlG~iL~ellt 893 (934)
||++...... ......+||+.|+|||++.+.. ++.++|||||||++|+|++
T Consensus 176 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~ 227 (360)
T 3e3p_A 176 FGSAKKLSPS----------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227 (360)
T ss_dssp CTTCBCCCTT----------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CCCceecCCC----------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999653211 1123457899999999997654 8999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHc
Q 002342 894 GYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~ 912 (934)
|++||.+.+....+..+..
T Consensus 228 g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 228 GEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp SSCSSCCSSHHHHHHHHHH
T ss_pred CCCCcCCCChHHHHHHHHH
Confidence 9999999999888887765
No 220
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.3e-33 Score=306.17 Aligned_cols=232 Identities=27% Similarity=0.494 Sum_probs=180.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--------
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-------- 740 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-------- 740 (934)
++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 5799999999999999999999999999999998642 3456778899999999999999999998864
Q ss_pred -----CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEec
Q 002342 741 -----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (934)
Q Consensus 741 -----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DF 815 (934)
.+..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 46789999999999999999764 345889999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHHHhC
Q 002342 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (934)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~elltG 894 (934)
|++............. ...............||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 161 g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLD-------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp CCCSCTTC--------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred cchhhcccccchhccc-------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 9986543211100000 00000111233456799999999999865 68999999999999999998
Q ss_pred CCCCCC-CCHHHHHHHHHcCCCCCCCCC
Q 002342 895 YTPFRG-KTRQKTFANILHKDLKFPSST 921 (934)
Q Consensus 895 ~~Pf~~-~~~~~~~~~i~~~~~~~p~~~ 921 (934)
||.. .+....+..+......+|...
T Consensus 227 --p~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T 1zy4_A 227 --PFSTGMERVNILKKLRSVSIEFPPDF 252 (303)
T ss_dssp --CCSSHHHHHHHHHHHHSTTCCCCTTC
T ss_pred --ccCCchhHHHHHHhccccccccCccc
Confidence 5543 444567777777777777643
No 221
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.4e-34 Score=324.85 Aligned_cols=203 Identities=20% Similarity=0.278 Sum_probs=159.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC--CCCCcccee-------EEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALY-------ASFQ 739 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l--~hp~Iv~l~-------~~~~ 739 (934)
..|++.+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.| +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4599999999999999999999999999999999986544556667778886555555 699977755 5554
Q ss_pred eC-----------------CeEEEEEEccCCCCchhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHHCCCeecC
Q 002342 740 TK-----------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAV------RFYAAEVVVALEYLHCQGIIYRD 796 (934)
Q Consensus 740 ~~-----------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~------~~i~~qil~aL~yLH~~giiHrD 796 (934)
.. ..+|||||||+ ++|.+++.... ..+..... ..++.||+.||+|||++||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 33 34899999997 89999997642 22444444 56779999999999999999999
Q ss_pred CCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CC
Q 002342 797 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AG 874 (934)
Q Consensus 797 LKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~ 874 (934)
|||+|||++.+|.+||+|||+|..... ......||+.|+|||++.+ ..
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~ 269 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------RGPASSVPVTYAPREFLNASTAT 269 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTC------------------------------EEEGGGSCGGGCCHHHHTCSEEE
T ss_pred CCHHHEEECCCCCEEEEecceeeecCC------------------------------CccCccCCcCCcChhhccCCCCC
Confidence 999999999999999999999854321 0113357799999999987 77
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 875 HTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 875 ~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
++.++|||||||+||+|++|++||.+...
T Consensus 270 ~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 89999999999999999999999987643
No 222
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-33 Score=320.66 Aligned_cols=221 Identities=19% Similarity=0.261 Sum_probs=177.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE-eCCeE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHV 744 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~ 744 (934)
..|++.+.||+|+||.||++.+..++ ..||+|.+... ........+.+|+.+++.++||||+++++++. .++..
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 35889999999999999999986543 46899988653 34456678899999999999999999999865 45688
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCC
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~ 824 (934)
|+||||+++++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 167 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999999764 345899999999999999999999999999999999999999999999999999643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002342 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (934)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~~~~ 903 (934)
.. ..........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+.
T Consensus 246 ~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~ 302 (373)
T 3c1x_A 246 EF-----------------------DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302 (373)
T ss_dssp -----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred cc-----------------------ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence 00 00111233467889999999999999999999999999999999 8999998888
Q ss_pred HHHHHHHHcCCC
Q 002342 904 QKTFANILHKDL 915 (934)
Q Consensus 904 ~~~~~~i~~~~~ 915 (934)
.+....+..+..
T Consensus 303 ~~~~~~~~~~~~ 314 (373)
T 3c1x_A 303 FDITVYLLQGRR 314 (373)
T ss_dssp SCHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 777777777654
No 223
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=306.45 Aligned_cols=208 Identities=26% Similarity=0.383 Sum_probs=176.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
...++|.....||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 95 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence 4456777778999999999999999999999999998754 2344567889999999999999999999999999999
Q ss_pred EEEEccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecccCcccCC
Q 002342 746 LITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~-~~~vkl~DFG~a~~~~~ 823 (934)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999999997652 235779999999999999999999999999999999999997 89999999999854321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
. ........||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...
T Consensus 176 ~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 176 I---------------------------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred C---------------------------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 1 01123457999999999997643 788999999999999999999999764
Q ss_pred CH
Q 002342 902 TR 903 (934)
Q Consensus 902 ~~ 903 (934)
..
T Consensus 229 ~~ 230 (295)
T 2clq_A 229 GE 230 (295)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 224
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.9e-33 Score=304.14 Aligned_cols=208 Identities=22% Similarity=0.276 Sum_probs=171.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE-EEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS-FQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~-~~~~~~~~l 746 (934)
.++|++.+.||+|+||.||++.+..+++.||+|++.... ....+.+|+.+++.+.|++++..+.. +...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 478999999999999999999999999999999876532 22347789999999988776655554 467888999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~ 823 (934)
||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999 999999987542 459999999999999999999999999999999999999 7889999999999965432
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccC--------------------ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 1110 0011223346689999999999999999999999999999999999999998743
No 225
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.6e-33 Score=307.29 Aligned_cols=200 Identities=28% Similarity=0.398 Sum_probs=167.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCccceeEEEEe----
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQT---- 740 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~Iv~l~~~~~~---- 740 (934)
..++|++.+.||+|+||.||++.+ +++.||||++... ....+..|.+++.. ++||||+++++++..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~ 77 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHS 77 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETT
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCC
Confidence 457899999999999999999987 7899999998653 23455667777776 799999999998654
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEEecCCcEEE
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSL 812 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~giiHrDLKp~NILl~~~~~vkl 812 (934)
...+|+||||+++++|.++++. ..+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||
T Consensus 78 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 78 STQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred CceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence 3568999999999999999964 35999999999999999999999 999999999999999999999999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC------CCCchhHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGI 886 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~s~~~DiwSlG~ 886 (934)
+|||++......... ........+||+.|+|||++.+. .++.++|||||||
T Consensus 155 ~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~ 211 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQ-----------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211 (301)
T ss_dssp CCCTTCEEEETTTTE-----------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHH
T ss_pred eeCCCeeeccccccc-----------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHH
Confidence 999998653221100 00112345799999999999876 4456999999999
Q ss_pred HHHHHHhC----------CCCCCC
Q 002342 887 LLYEMLYG----------YTPFRG 900 (934)
Q Consensus 887 iL~elltG----------~~Pf~~ 900 (934)
++|+|++| .+||..
T Consensus 212 il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 212 VLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp HHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred HHHHHHhhhcCccccccccccccc
Confidence 99999999 899965
No 226
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=315.70 Aligned_cols=229 Identities=24% Similarity=0.310 Sum_probs=186.4
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
..+.+..++|++.+.||+|+||.||++.+.. .+|+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 4456778999999999999999999999854 499999875422 222334567899999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999999999997643 4599999999999999999999999999999999999998 789999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC---------CCCCchhHHHHHHHHHHHHH
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---------AGHTSAVDWWALGILLYEML 892 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---------~~~s~~~DiwSlG~iL~ell 892 (934)
..... ...........||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 180 ~~~~~----------------------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 180 GVLQA----------------------GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp ------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccc----------------------cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 21100 001122234569999999999975 45788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002342 893 YGYTPFRGKTRQKTFANILHKDLKFP 918 (934)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~~~~~p 918 (934)
+|..||.+.+.......+..+.....
T Consensus 238 ~g~~p~~~~~~~~~~~~~~~~~~~~~ 263 (319)
T 2y4i_B 238 AREWPFKTQPAEAIIWQMGTGMKPNL 263 (319)
T ss_dssp HSSCSSSSCCHHHHHHHHHTTCCCCC
T ss_pred hCCCCCCCCCHHHHHHHhccCCCCCC
Confidence 99999999999988888877655433
No 227
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-33 Score=317.80 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=175.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-----------CCCc
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----------HPFV 731 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-----------hp~I 731 (934)
+..+..++|++.+.||+|+||.||+|.+..+++.||||++.+. ......+.+|+.+++.+. ||||
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i 88 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchH
Confidence 3445668999999999999999999999999999999998753 334566788999998886 8999
Q ss_pred cceeEEEEeCC----eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEec
Q 002342 732 PALYASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 806 (934)
Q Consensus 732 v~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~ 806 (934)
+++++++...+ ++++||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence 99999998654 789999999 99999999876556699999999999999999999998 9999999999999954
Q ss_pred C------CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhH
Q 002342 807 N------GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (934)
Q Consensus 807 ~------~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~D 880 (934)
+ +.+||+|||++..... .....+||+.|+|||++.+..++.++|
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 217 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDE------------------------------HYTNSIQTREYRSPEVLLGAPWGCGAD 217 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTB------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHH
T ss_pred cCCCcCcceEEEcccccccccCC------------------------------CCCCCCCCccccCcHHHhCCCCCchHh
Confidence 3 3799999999854321 112347899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCC
Q 002342 881 WWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 881 iwSlG~iL~elltG~~Pf~~~~ 902 (934)
||||||++|+|++|.+||.+.+
T Consensus 218 i~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 218 IWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp HHHHHHHHHHHHHSSCCC----
T ss_pred HHHHHHHHHHHHhCCCCCCCCc
Confidence 9999999999999999998755
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=322.45 Aligned_cols=205 Identities=27% Similarity=0.434 Sum_probs=157.8
Q ss_pred CCcccc-cccccCCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe--CCe
Q 002342 669 QHFRPI-KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (934)
Q Consensus 669 ~~y~i~-~~LG~G~~g~Vy~a~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~ 743 (934)
+.|.+. ++||+|+||.||+|.++ .+++.||||++..... ...+.+|+.+|+.++||||++++++|.. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 457774 57999999999999976 5788999999875421 2357789999999999999999999954 678
Q ss_pred EEEEEEccCCCCchhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEE
Q 002342 744 VCLITDYCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSL 812 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl----~~~~~vkl 812 (934)
+|+||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 99999999 56888877532 12249999999999999999999999999999999999999 66789999
Q ss_pred EecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC-CCCchhHHHHHHHHHHHH
Q 002342 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 891 (934)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~~DiwSlG~iL~el 891 (934)
+|||+|....... .........+||+.|+|||++.+. .++.++|||||||+||+|
T Consensus 174 ~Dfg~a~~~~~~~------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el 229 (405)
T 3rgf_A 174 ADMGFARLFNSPL------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229 (405)
T ss_dssp CCTTCCC----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred EECCCceecCCCC------------------------cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHH
Confidence 9999996542110 011223456899999999999874 589999999999999999
Q ss_pred HhCCCCCCCCCH
Q 002342 892 LYGYTPFRGKTR 903 (934)
Q Consensus 892 ltG~~Pf~~~~~ 903 (934)
++|++||.+...
T Consensus 230 l~g~~pf~~~~~ 241 (405)
T 3rgf_A 230 LTSEPIFHCRQE 241 (405)
T ss_dssp HHSSCTTCCCC-
T ss_pred HhCCCCCCCccc
Confidence 999999987654
No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.1e-33 Score=323.18 Aligned_cols=208 Identities=23% Similarity=0.296 Sum_probs=176.4
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~~~~~~~~~l 746 (934)
.++|++.+.||+|+||.||++.+..+++.||||++..... ...+.+|+++++.+.| ++|+.+..++...+..||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 5789999999999999999999999999999998875432 1246789999999976 566677777778889999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEEecccCcccCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl---~~~~~vkl~DFG~a~~~~~ 823 (934)
||||+ +++|.+++.... ..+++..++.|+.||+.||.|||++|||||||||+|||| +.++.+||+|||+++....
T Consensus 81 vme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp EEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99999 999999997542 459999999999999999999999999999999999999 5789999999999965432
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002342 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (934)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~ 902 (934)
.... ...+.......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+..
T Consensus 159 ~~~~--------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 159 TSTH--------------------QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp TTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred Cccc--------------------cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 1110 0111233446789999999999999999999999999999999999999998743
No 230
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-33 Score=305.57 Aligned_cols=209 Identities=23% Similarity=0.442 Sum_probs=171.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 745 (934)
++.++|++.+.||+|+||.||++.+ .++.||+|.+... .....+.+|+.+|+.++||||+++++++.+ ..|
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 75 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVC 75 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcE
Confidence 4567899999999999999999987 5789999998642 345678899999999999999999998764 478
Q ss_pred EEEEccCCCCchhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCCCCEEEecCCc-EEEEecccCcc
Q 002342 746 LITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHC---QGIIYRDLKPENVLLQGNGH-VSLTDFDLSCL 820 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~yLH~---~giiHrDLKp~NILl~~~~~-vkl~DFG~a~~ 820 (934)
+||||+++++|.+++..... ..++...+..++.||+.||.|||+ +||+||||||+|||++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999976432 247899999999999999999999 89999999999999998886 79999999853
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 156 ~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 156 IQT------------------------------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp ---------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ccc------------------------------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 211 01233589999999999999999999999999999999999999985
Q ss_pred CC--HHHHHHHHHcC
Q 002342 901 KT--RQKTFANILHK 913 (934)
Q Consensus 901 ~~--~~~~~~~i~~~ 913 (934)
.. .......+..+
T Consensus 206 ~~~~~~~~~~~~~~~ 220 (307)
T 2eva_A 206 IGGPAFRIMWAVHNG 220 (307)
T ss_dssp TCSSHHHHHHHHHTT
T ss_pred hCccHHHHHHHHhcC
Confidence 43 33444444443
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.6e-33 Score=306.36 Aligned_cols=222 Identities=24% Similarity=0.366 Sum_probs=179.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC--CCCccceeEEEEe
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQT 740 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~ 740 (934)
...+..++|++++.||+|+||.||++.+. +++.||+|++.... ........+.+|+.+++.+. ||||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 34456778999999999999999999984 58899999997643 24556678899999999997 5999999999999
Q ss_pred CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.+..|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++..
T Consensus 100 ~~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 100 DQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp SSEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred CCEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccc
Confidence 9999999995 489999999875 4599999999999999999999999999999999999996 58999999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCchhHHHHHHHHHH
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLY 889 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~s~~~DiwSlG~iL~ 889 (934)
...... .......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 176 ~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~ 230 (313)
T 3cek_A 176 MQPDTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230 (313)
T ss_dssp ---------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred ccCccc-------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence 321100 011234579999999999976 46788999999999999
Q ss_pred HHHhCCCCCCCCC-HHHHHHHHHcCCC
Q 002342 890 EMLYGYTPFRGKT-RQKTFANILHKDL 915 (934)
Q Consensus 890 elltG~~Pf~~~~-~~~~~~~i~~~~~ 915 (934)
+|++|..||.... ....+..+.....
T Consensus 231 el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 231 YMTYGKTPFQQIINQISKLHAIIDPNH 257 (313)
T ss_dssp HHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred HHHhCCCchhhHHHHHHHHHHHHhccc
Confidence 9999999998754 3445555655443
No 232
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.8e-33 Score=307.13 Aligned_cols=207 Identities=23% Similarity=0.280 Sum_probs=175.0
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccc-cChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 747 (934)
..|...+.||+|+||.||++.+ ++..||+|.+..... ........+.+|+.+++.++||||+++++++...+..|+|
T Consensus 31 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 31 PISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp BTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred cccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEE
Confidence 3466679999999999999986 688999999875432 2344567788999999999999999999999999999999
Q ss_pred EEccCCCCchhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 748 TDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
|||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 188 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence 9999999999998643 234599999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~ 903 (934)
........||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+...
T Consensus 189 -------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 189 -------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp -------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred -------------------------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 111234579999999999875 478899999999999999999999987544
No 233
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.7e-33 Score=306.45 Aligned_cols=221 Identities=27% Similarity=0.424 Sum_probs=168.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 743 (934)
.....++|++++.||+|+||.||+|.+..+++.||||++..... .......+..+..+++.++||||+++++++...+.
T Consensus 20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~ 98 (318)
T 2dyl_A 20 YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD 98 (318)
T ss_dssp EECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc
Confidence 34567899999999999999999999999999999999976432 22233344455567888899999999999999999
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecccCcccC
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~ 822 (934)
.|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 99999999 66565555432 34599999999999999999999996 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc-----CCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
.. .......||+.|+|||++. ...++.++|||||||++|+|++|+.|
T Consensus 177 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (318)
T 2dyl_A 177 DD----------------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228 (318)
T ss_dssp --------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CC----------------------------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCC
Confidence 11 1112346999999999994 56788899999999999999999999
Q ss_pred CCC-CCHHHHHHHHHcCCC
Q 002342 898 FRG-KTRQKTFANILHKDL 915 (934)
Q Consensus 898 f~~-~~~~~~~~~i~~~~~ 915 (934)
|.. ....+.+..+..+..
T Consensus 229 f~~~~~~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 229 YKNCKTDFEVLTKVLQEEP 247 (318)
T ss_dssp TTTCCSHHHHHHHHHHSCC
T ss_pred CCCCCccHHHHHHHhccCC
Confidence 987 455677777776553
No 234
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.4e-33 Score=310.07 Aligned_cols=205 Identities=27% Similarity=0.358 Sum_probs=175.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhCC--CCCccceeEEEEe
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLD--HPFVPALYASFQT 740 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~ 740 (934)
...++|++.+.||+|+||.||++.+..+++.||||++.+...... .....+.+|+.+++.+. ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 346789999999999999999999999999999999986533221 12234567999999996 5999999999999
Q ss_pred CCeEEEEEEccCC-CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecccC
Q 002342 741 KTHVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (934)
Q Consensus 741 ~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-~~~~vkl~DFG~a 818 (934)
.+..++||||+.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 9999999999976 8999998764 4599999999999999999999999999999999999999 7899999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCC-CchhHHHHHHHHHHHHHhCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~~DiwSlG~iL~elltG~~P 897 (934)
..... .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.|
T Consensus 198 ~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 198 ALLKD-----------------------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp EECCS-----------------------------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccc-----------------------------ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence 54321 11224569999999999987666 6789999999999999999999
Q ss_pred CCCC
Q 002342 898 FRGK 901 (934)
Q Consensus 898 f~~~ 901 (934)
|...
T Consensus 249 f~~~ 252 (320)
T 3a99_A 249 FEHD 252 (320)
T ss_dssp CCSH
T ss_pred CCCh
Confidence 9653
No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=309.74 Aligned_cols=209 Identities=23% Similarity=0.381 Sum_probs=177.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
..+..++|++++.||+|+||.||++++ ..+++.||+|.+... .......+.+|+.+++.++||||+++++++.
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 112 (326)
T 2w1i_A 36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 112 (326)
T ss_dssp -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence 345567899999999999999999984 568999999998753 3455677899999999999999999999987
Q ss_pred eCC--eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 740 TKT--HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 740 ~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
..+ .+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 113 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence 543 7899999999999999997753 4599999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+........ .........+++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 192 ~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~ 247 (326)
T 2w1i_A 192 TKVLPQDKE------------------------YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 247 (326)
T ss_dssp CEECCSSCS------------------------EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCG
T ss_pred hhhcccccc------------------------ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCC
Confidence 865432110 00112234578889999999988899999999999999999999999
Q ss_pred CCC
Q 002342 898 FRG 900 (934)
Q Consensus 898 f~~ 900 (934)
|..
T Consensus 248 ~~~ 250 (326)
T 2w1i_A 248 SKS 250 (326)
T ss_dssp GGS
T ss_pred CCC
Confidence 864
No 236
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=100.00 E-value=6e-31 Score=276.71 Aligned_cols=220 Identities=22% Similarity=0.444 Sum_probs=205.9
Q ss_pred EEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEE
Q 002342 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLL 281 (934)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~ 281 (934)
|+++|. +|+|+++|++|++++||+++|++|+++..+.++.........++..+..+..+.++++.+++||+.+|+.+
T Consensus 2 i~i~D~---~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~ 78 (227)
T 3ewk_A 2 VSITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDS 78 (227)
T ss_dssp EEEEET---TCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEEE
T ss_pred EEEECC---CCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeeee
Confidence 678898 77899999999999999999999999888877777777888888999999999999999999999999999
Q ss_pred EeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCCCCcccCCCCCcc
Q 002342 282 TIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPI 361 (934)
Q Consensus 282 s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 361 (934)
++.|++|.+|.+.+++++.+|||++|+++++|+.
T Consensus 79 ~~~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~---------------------------------------------- 112 (227)
T 3ewk_A 79 TIVPLMDNAGKPRQYISIRRDITAQKEAEAQLAR---------------------------------------------- 112 (227)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTTTHHHHHHHH----------------------------------------------
T ss_pred EEEEEEcCCCCEEEEEEEEEehhhHHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999999988762
Q ss_pred cccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccccccccccccccccCCCCCCCccccc
Q 002342 362 IRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEI 441 (934)
Q Consensus 362 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (934)
T Consensus 113 -------------------------------------------------------------------------------- 112 (227)
T 3ewk_A 113 -------------------------------------------------------------------------------- 112 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCc
Q 002342 442 IMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCR 521 (934)
Q Consensus 442 ~~~~~~~~~~~~~~~dv~~r~~~e~~l~~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~ 521 (934)
++.++++++++|+++|.+|+ |+++|++|++++||+.+|++|+++.
T Consensus 113 --------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~e~~g~~~~ 157 (227)
T 3ewk_A 113 --------------------------------LKQAMDANSEMILLTDRAGR---IIYANPALCRFSGMAEGELLGQSPS 157 (227)
T ss_dssp --------------------------------HHHHHHTCCSEEEEECTTSC---EEEECHHHHHHHTCCTHHHHSSCGG
T ss_pred --------------------------------HHHHHhcCcCeEEEEcCCCc---EEEEchHHHHHhCCCHHHHcCCChh
Confidence 66788899999999999888 9999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCc------EEEEEEEEEeeecCCCCEEEEEEEEEc
Q 002342 522 FLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK------KFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (934)
Q Consensus 522 ~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~------~~wv~~~~~pi~de~G~v~~~vgi~rD 585 (934)
.+.++.........+++.+..+..+.+|+..++++|. .+|+++++.|++|.+|.+++++++++|
T Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 158 ILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp GGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred hccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 9999988888899999999999999999999999997 899999999999999999999999998
No 237
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.4e-32 Score=330.03 Aligned_cols=225 Identities=26% Similarity=0.388 Sum_probs=187.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..++|++.+.||+|+||.||++.+..+ +..||+|.+... ........+.+|+.+|+.++||||+++++++. +
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34567899999999999999999998653 568999988653 23455577889999999999999999999985 4
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred CceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 67899999999999999997653 45999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ellt-G~~Pf~~ 900 (934)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+
T Consensus 542 ~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 542 EDST--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CC------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCc--------------------------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 2110 011223457889999999999999999999999999999997 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCC
Q 002342 901 KTRQKTFANILHKD-LKFPS 919 (934)
Q Consensus 901 ~~~~~~~~~i~~~~-~~~p~ 919 (934)
.+..+.+..+..+. ..+|.
T Consensus 596 ~~~~~~~~~i~~~~~~~~~~ 615 (656)
T 2j0j_A 596 VKNNDVIGRIENGERLPMPP 615 (656)
T ss_dssp CCHHHHHHHHHHTCCCCCCT
T ss_pred CCHHHHHHHHHcCCCCCCCc
Confidence 99999998888765 34444
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.6e-32 Score=303.58 Aligned_cols=209 Identities=25% Similarity=0.387 Sum_probs=158.1
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCccceeEEEEeC
Q 002342 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+.+..++|++++.||+|+||.||++.+..+++.||||++.... .......+..|+. +++.++||||+++++++...
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~ 93 (327)
T 3aln_A 16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE 93 (327)
T ss_dssp EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence 34566789999999999999999999999999999999997642 2334445556665 67778999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEeccc
Q 002342 742 THVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 817 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~yLH~~-giiHrDLKp~NILl~~~~~vkl~DFG~ 817 (934)
+..|+||||+. ++|.+++.. .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 94 GDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp SEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred CceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 99999999995 588777652 2235699999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh----cCCCCCchhHHHHHHHHHHHHHh
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLY 893 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~s~~~DiwSlG~iL~ellt 893 (934)
+...... .......||+.|+|||++ .+..++.++|||||||++|+|++
T Consensus 173 ~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~ 224 (327)
T 3aln_A 173 SGQLVDS----------------------------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT 224 (327)
T ss_dssp SCC----------------------------------------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred ceecccc----------------------------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHH
Confidence 8543211 111233699999999999 56678999999999999999999
Q ss_pred CCCCCCCCC
Q 002342 894 GYTPFRGKT 902 (934)
Q Consensus 894 G~~Pf~~~~ 902 (934)
|..||.+..
T Consensus 225 g~~pf~~~~ 233 (327)
T 3aln_A 225 GRFPYPKWN 233 (327)
T ss_dssp SCCCSSCC-
T ss_pred CCCCCCCcc
Confidence 999998754
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-33 Score=306.89 Aligned_cols=204 Identities=28% Similarity=0.415 Sum_probs=166.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---HHHHHHHHHHHHHHhC----CCCCccceeEEE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDML----DHPFVPALYASF 738 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---~~~~~~~~E~~il~~l----~hp~Iv~l~~~~ 738 (934)
...++|++.+.||+|+||.||++.+..+++.||+|++........ .....+.+|+.+++.+ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 345789999999999999999999999999999999976432221 1223455799999998 899999999999
Q ss_pred EeCCeEEEEEEc-cCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecc
Q 002342 739 QTKTHVCLITDY-CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFD 816 (934)
Q Consensus 739 ~~~~~~~lV~E~-~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~-~~~~vkl~DFG 816 (934)
...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 999999999999 7899999999764 3499999999999999999999999999999999999999 78999999999
Q ss_pred cCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCC-chhHHHHHHHHHHHHHhCC
Q 002342 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s-~~~DiwSlG~iL~elltG~ 895 (934)
++...... ......||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus 186 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 186 SGALLHDE-----------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp SCEECCSS-----------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhcccC-----------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 98553211 12345699999999999877664 4899999999999999999
Q ss_pred CCCCC
Q 002342 896 TPFRG 900 (934)
Q Consensus 896 ~Pf~~ 900 (934)
.||.+
T Consensus 237 ~pf~~ 241 (312)
T 2iwi_A 237 IPFER 241 (312)
T ss_dssp CSCCS
T ss_pred CCCCC
Confidence 99965
No 240
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=310.16 Aligned_cols=206 Identities=26% Similarity=0.397 Sum_probs=162.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH--HHhCCCCCccceeEEEEe-
Q 002342 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI--LDMLDHPFVPALYASFQT- 740 (934)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~i--l~~l~hp~Iv~l~~~~~~- 740 (934)
..+..++|++.+.||+|+||.||++.+ +++.||||++.... ...+..|.++ +..++||||+++++.+..
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence 346778999999999999999999976 78999999987531 2333444444 455899999999986542
Q ss_pred ----CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEEecC
Q 002342 741 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGN 807 (934)
Q Consensus 741 ----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---------giiHrDLKp~NILl~~~ 807 (934)
...+|+|||||++++|.+++... .+++..+..++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 80 TADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp CTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred ccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence 33679999999999999999764 268899999999999999999999 99999999999999999
Q ss_pred CcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-------CCCCchhH
Q 002342 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVD 880 (934)
Q Consensus 808 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~s~~~D 880 (934)
+.+||+|||++.......... ...........+||+.|+|||++.+ ..++.++|
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~-------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVR-------------------PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccC-------------------ccccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 999999999996543221100 0011122335579999999999987 35567899
Q ss_pred HHHHHHHHHHHHhCCCCCC
Q 002342 881 WWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 881 iwSlG~iL~elltG~~Pf~ 899 (934)
||||||++|+|++|..||.
T Consensus 218 iwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGS
T ss_pred hHHHHHHHHHHHhcCCcCC
Confidence 9999999999999966653
No 241
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.7e-32 Score=303.08 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=164.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC--CCCCccceeEEEEeC----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTK---- 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l--~hp~Iv~l~~~~~~~---- 741 (934)
.++|++.+.||+|+||.||++.+ +++.||||++... .......|.+++..+ +||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 46899999999999999999988 4899999998643 223445566666554 899999999999877
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEE
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 813 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------giiHrDLKp~NILl~~~~~vkl~ 813 (934)
..+|+|||||++++|.+++... .+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999763 499999999999999999999999 99999999999999999999999
Q ss_pred ecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCch------hHHHHHHHH
Q 002342 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGIL 887 (934)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~------~DiwSlG~i 887 (934)
|||++......... ........+||+.|+|||++.+..++.. +|||||||+
T Consensus 185 Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 241 (337)
T 3mdy_A 185 DLGLAVKFISDTNE-----------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241 (337)
T ss_dssp CCTTCEECC--------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred eCCCceeecccccc-----------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence 99998654221100 0011234579999999999988766654 999999999
Q ss_pred HHHHHhC----------CCCCCC
Q 002342 888 LYEMLYG----------YTPFRG 900 (934)
Q Consensus 888 L~elltG----------~~Pf~~ 900 (934)
+|+|++| ..||..
T Consensus 242 l~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 242 LWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTT
T ss_pred HHHHHhccCcccccccccccHhh
Confidence 9999999 778865
No 242
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=6.2e-32 Score=295.01 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=163.1
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeC
Q 002342 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (934)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 741 (934)
.+..+..++|++.+.||+|+||.||++.+..+++.||||++.............+.+|+.+++.++||||+++++++...
T Consensus 24 ~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~ 103 (286)
T 3uqc_A 24 PGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR 103 (286)
T ss_dssp TTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC
Confidence 34435568899999999999999999999999999999999876555566678899999999999999999999999999
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~ 821 (934)
+..|+||||++|++|.+++... .....+..++.||+.||.|||++||+||||||+|||++.+|.+||+++|.
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~---- 175 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT---- 175 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC----
T ss_pred CcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc----
Confidence 9999999999999999998542 35567888999999999999999999999999999999999999985542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002342 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (934)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~ 901 (934)
++ .++.++|||||||+||+|++|+.||.+.
T Consensus 176 -------------------------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~ 205 (286)
T 3uqc_A 176 -------------------------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEA 205 (286)
T ss_dssp -------------------------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCC
T ss_pred -------------------------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 22 2678999999999999999999999876
Q ss_pred CHH
Q 002342 902 TRQ 904 (934)
Q Consensus 902 ~~~ 904 (934)
+..
T Consensus 206 ~~~ 208 (286)
T 3uqc_A 206 GVR 208 (286)
T ss_dssp SBC
T ss_pred Ccc
Confidence 543
No 243
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=1.8e-33 Score=314.27 Aligned_cols=197 Identities=17% Similarity=0.180 Sum_probs=164.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCC---------CCCc
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLD---------HPFV 731 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-----~~~~~~~~~~E~~il~~l~---------hp~I 731 (934)
+..++|++.+.||+|+||+||+|++ +++.||||++.+.... .......+.+|+.+|+.++ ||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 4467899999999999999999998 7899999999865321 2233467889999998885 7777
Q ss_pred cceeEEEE-----------------e-------------CCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHH
Q 002342 732 PALYASFQ-----------------T-------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 781 (934)
Q Consensus 732 v~l~~~~~-----------------~-------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil 781 (934)
+.+++++. + .+.+|||||||++|++.+.+.+ +.+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 77766542 2 6889999999999987777744 4589999999999999
Q ss_pred HHHHHHH-HCCCeecCCCCCCEEEecCC--------------------cEEEEecccCcccCCCCCCCCCcchhhhcccc
Q 002342 782 VALEYLH-CQGIIYRDLKPENVLLQGNG--------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (934)
Q Consensus 782 ~aL~yLH-~~giiHrDLKp~NILl~~~~--------------------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (934)
.||.||| ++||+||||||+|||++.++ .+||+|||+|+...
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~------------------ 233 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER------------------ 233 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE------------------
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC------------------
Confidence 9999999 99999999999999999887 89999999995431
Q ss_pred CCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHH-HHHHHhCCCCCCC
Q 002342 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL-LYEMLYGYTPFRG 900 (934)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~i-L~elltG~~Pf~~ 900 (934)
....+||+.|||||++.+.. +.++||||||++ .++++.|..||.+
T Consensus 234 --------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 234 --------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp --------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred --------------CCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 11347999999999998776 889999998877 7778889999954
No 244
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=8.3e-32 Score=301.03 Aligned_cols=213 Identities=23% Similarity=0.346 Sum_probs=175.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCccceeEEEEeCC---
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 742 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~Iv~l~~~~~~~~--- 742 (934)
.++|++.+.||+|+||.||++.+ +++.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 36899999999999999999998 6899999998643 23567789999988 78999999999998775
Q ss_pred -eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEEecCCcEEEE
Q 002342 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLT 813 (934)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~giiHrDLKp~NILl~~~~~vkl~ 813 (934)
..|+||||+++++|.+++... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 899999999999999999763 4999999999999999999999 8999999999999999999999999
Q ss_pred ecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCC------CCchhHHHHHHHH
Q 002342 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGIL 887 (934)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~s~~~DiwSlG~i 887 (934)
|||++......... .........||+.|+|||++.+.. ++.++|||||||+
T Consensus 190 Dfg~~~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 190 DLGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp CCTTCEEEETTTTE-----------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCceeccccccc-----------------------cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 99998553211100 001223457999999999998763 2368999999999
Q ss_pred HHHHHhC----------CCCCCCC-----CHHHHHHHHHcCC
Q 002342 888 LYEMLYG----------YTPFRGK-----TRQKTFANILHKD 914 (934)
Q Consensus 888 L~elltG----------~~Pf~~~-----~~~~~~~~i~~~~ 914 (934)
+|+|++| ..||... ........+..+.
T Consensus 247 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
T 1b6c_B 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288 (342)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred HHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHH
Confidence 9999999 8899764 2344455554443
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=1.3e-31 Score=310.13 Aligned_cols=220 Identities=25% Similarity=0.311 Sum_probs=166.9
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~l 746 (934)
.+.|.+.+.||+|+||+||.+ ...+|+.||||.+... ....+.+|+.+|+.+ +||||+++++++.+.+.+||
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 355667789999999999875 4568999999998653 234567899999876 89999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-------------C
Q 002342 747 ITDYCPGGELFLLLDRQPTKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------G 808 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~-----l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~-------------~ 808 (934)
||||| +++|.+++....... .++..+..++.||+.||.|||++||+||||||+|||++.+ +
T Consensus 87 v~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 87 ALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp EECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred EEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCce
Confidence 99999 579999997643211 1233456799999999999999999999999999999754 4
Q ss_pred cEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC-------CCCCchhHH
Q 002342 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDW 881 (934)
Q Consensus 809 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~s~~~Di 881 (934)
.+||+|||++......... ........+||+.|+|||++.+ ..++.++||
T Consensus 166 ~~kL~DFG~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di 222 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSS-----------------------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222 (434)
T ss_dssp EEEECCCTTCEECCC-------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred EEEEcccccceecCCCCcc-----------------------ceeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence 8999999999654321100 0011234579999999999976 678899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 002342 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSS 920 (934)
Q Consensus 882 wSlG~iL~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 920 (934)
|||||++|+|++ |.+||.+..... ..+..+.+.++..
T Consensus 223 wSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~ 260 (434)
T 2rio_A 223 FSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEM 260 (434)
T ss_dssp HHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCC
T ss_pred HhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccc
Confidence 999999999998 999997655443 4566666655543
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.1e-31 Score=328.39 Aligned_cols=195 Identities=24% Similarity=0.346 Sum_probs=168.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEec-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEeCCe--
Q 002342 667 NLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-- 743 (934)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~-- 743 (934)
..++|++.+.||+|+||.||++.+.. +++.||||++... ........+.+|+.+|+.++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 35899999999999999999999976 7999999998653 234555678899999999999999999999987655
Q ss_pred ---EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 744 ---VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 744 ---~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.||||||++|++|.+++.. .+++..+..++.||+.||.|||++|||||||||+|||++.+ .+||+|||++..
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp CEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988754 49999999999999999999999999999999999999874 999999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002342 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (934)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~~ 900 (934)
... ....+||+.|+|||++.+.. +.++|||||||+||+|++|.+||.+
T Consensus 231 ~~~-------------------------------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 231 INS-------------------------------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp TTC-------------------------------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred ccc-------------------------------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence 311 13457999999999997654 8899999999999999999999875
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=4.5e-32 Score=323.98 Aligned_cols=207 Identities=30% Similarity=0.471 Sum_probs=177.2
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEEe------C
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------~ 741 (934)
.++|++.+.||+|+||.||++.+..+|+.||||++... ........+.+|+.+|+.++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 47899999999999999999999999999999998754 245556778999999999999999999998765 6
Q ss_pred CeEEEEEEccCCCCchhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEEeccc
Q 002342 742 THVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDL 817 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~---vkl~DFG~ 817 (934)
+..|+|||||+|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.++. +||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999997643 235899999999999999999999999999999999999997765 99999999
Q ss_pred CcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCC
Q 002342 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (934)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~P 897 (934)
+...... ......+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 171 a~~~~~~----------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 171 AKELDQG----------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222 (676)
T ss_dssp CCBTTSC----------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred ccccccc----------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 8643211 112345799999999999999999999999999999999999999
Q ss_pred CCCCCHH
Q 002342 898 FRGKTRQ 904 (934)
Q Consensus 898 f~~~~~~ 904 (934)
|.+....
T Consensus 223 f~~~~~~ 229 (676)
T 3qa8_A 223 FLPNWQP 229 (676)
T ss_dssp CCSSCHH
T ss_pred CCcccch
Confidence 9875443
No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=1.7e-33 Score=308.91 Aligned_cols=199 Identities=25% Similarity=0.378 Sum_probs=153.2
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCccceeEEEEeCC----
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT---- 742 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~Iv~l~~~~~~~~---- 742 (934)
++|++.+.||+|+||.||++.+ +++.||||++.+. ....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 5799999999999999999987 5889999998643 23456778888877 79999999999998776
Q ss_pred eEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEEecCCcEEEEe
Q 002342 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTD 814 (934)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~giiHrDLKp~NILl~~~~~vkl~D 814 (934)
.+|+||||+++++|.+++... .+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eeEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 889999999999999999653 4888899999999999999999 99999999999999999999999999
Q ss_pred cccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCC------CCCchhHHHHHHHHH
Q 002342 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILL 888 (934)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~s~~~DiwSlG~iL 888 (934)
||++......... ........+||+.|+|||++.+. .++.++|||||||++
T Consensus 152 Fg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 208 (303)
T 3gxj_A 152 LGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208 (303)
T ss_dssp CCC-CCEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC
T ss_pred cCcceeccCCCcc-----------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHH
Confidence 9998543211100 00112345799999999999876 334689999999999
Q ss_pred HHHHhC----------CCCCCCC
Q 002342 889 YEMLYG----------YTPFRGK 901 (934)
Q Consensus 889 ~elltG----------~~Pf~~~ 901 (934)
|+|++| ..||...
T Consensus 209 ~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 209 WEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp -CTGGGBCBTTBC-CCCCTTTTT
T ss_pred HHHHhcCCCccccceeecccccc
Confidence 999999 7788653
No 249
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=308.02 Aligned_cols=207 Identities=22% Similarity=0.323 Sum_probs=162.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeE
Q 002342 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (934)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 744 (934)
+...+|.+.+.||+|+||+||. ....+++.||||.+.+... ....+|+.+|+.+ +||||+++++++.+....
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 93 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ 93 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred EccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence 3445799999999999999764 4557899999999875432 2245799999999 799999999999999999
Q ss_pred EEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---C--CcEEEEecccCc
Q 002342 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSC 819 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~--~~vkl~DFG~a~ 819 (934)
||||||| +++|.+++.... ..+....+..++.||+.||.|||++||+||||||+|||++. + .++||+|||+|.
T Consensus 94 ~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 94 YIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp EEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred EEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9999999 579999997653 23555567789999999999999999999999999999953 2 358899999996
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhc---CCCCCchhHHHHHHHHHHHHHh-CC
Q 002342 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLY-GY 895 (934)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~~DiwSlG~iL~ellt-G~ 895 (934)
....... ........+||+.|+|||++. ...++.++|||||||++|+|++ |.
T Consensus 172 ~~~~~~~------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~ 227 (432)
T 3p23_A 172 KLAVGRH------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS 227 (432)
T ss_dssp CC------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC
T ss_pred eccCCCc------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC
Confidence 5421100 011234567999999999997 4567789999999999999999 99
Q ss_pred CCCCCCCHHH
Q 002342 896 TPFRGKTRQK 905 (934)
Q Consensus 896 ~Pf~~~~~~~ 905 (934)
+||.......
T Consensus 228 ~pf~~~~~~~ 237 (432)
T 3p23_A 228 HPFGKSLQRQ 237 (432)
T ss_dssp BTTBSTTTHH
T ss_pred CCcchhhHHH
Confidence 9996654443
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=7.3e-32 Score=310.13 Aligned_cols=213 Identities=18% Similarity=0.149 Sum_probs=164.7
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCc---------cc----
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFV---------PA---- 733 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~I---------v~---- 733 (934)
...|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+.| .|. +.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468889999999999999999999999999999885433333446778899999999977 221 11
Q ss_pred --------eeEEEEe-----CCeEEEEEEccCCCCchhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 002342 734 --------LYASFQT-----KTHVCLITDYCPGGELFLLLD-----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (934)
Q Consensus 734 --------l~~~~~~-----~~~~~lV~E~~~ggsL~~~l~-----~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHr 795 (934)
+..++.. ....+++|+++ +++|.+++. ......+++..+..++.||+.||+|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1111111 23467888877 899999985 2223458888999999999999999999999999
Q ss_pred CCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhh-----
Q 002342 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----- 870 (934)
Q Consensus 796 DLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----- 870 (934)
||||+|||++.++.+||+|||+++.... .....+| +.|+|||++
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------SAVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE------------------------------EECCCCC-TTTCCHHHHHHHTS
T ss_pred CcccceEEEecCCeEEEEeccceeecCC------------------------------ccccCCC-CceeCchhhhcccc
Confidence 9999999999999999999999854211 1234578 999999999
Q ss_pred -----cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Q 002342 871 -----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (934)
Q Consensus 871 -----~~~~~s~~~DiwSlG~iL~elltG~~Pf~~~~~~~~~~~i~~ 912 (934)
.+..++.++|||||||+||+|++|+.||.+.+.......+..
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~ 331 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR 331 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh
Confidence 555688899999999999999999999988766554444443
No 251
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=7.3e-31 Score=288.20 Aligned_cols=181 Identities=26% Similarity=0.467 Sum_probs=156.3
Q ss_pred cCCcccc-cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhCCCCCccceeEEEEe----C
Q 002342 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (934)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~Iv~l~~~~~~----~ 741 (934)
.++|.+. +.||+|+||.||++.+..+++.||+|++... ....+|+.++ +.++||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4678888 7799999999999999999999999998643 3566788888 66699999999999987 7
Q ss_pred CeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecccC
Q 002342 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (934)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~---~~~vkl~DFG~a 818 (934)
..+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 78999999999999999998876567999999999999999999999999999999999999998 788999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002342 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (934)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf 898 (934)
.... +..++.++|||||||++|+|++|.+||
T Consensus 168 ~~~~-------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf 198 (299)
T 3m2w_A 168 KETT-------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198 (299)
T ss_dssp EECT-------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccc-------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCC
Confidence 4311 134667899999999999999999999
Q ss_pred CCCCHHH
Q 002342 899 RGKTRQK 905 (934)
Q Consensus 899 ~~~~~~~ 905 (934)
.+.+...
T Consensus 199 ~~~~~~~ 205 (299)
T 3m2w_A 199 YSNHGLA 205 (299)
T ss_dssp CC-----
T ss_pred CCCcchh
Confidence 8765544
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=7.3e-30 Score=304.17 Aligned_cols=188 Identities=16% Similarity=0.122 Sum_probs=134.1
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeeccccc-------ChHHHHHHHHHHHHHHhC-CCCCccceeEEEEeCCeEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~-------~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~l 746 (934)
..++.|++|.+..++....|..||+|++.+.... .....+.+.+|+++|+++ .|+||+++++++++++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 3567888888888888888999999999865321 123346688999999999 79999999999999999999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
|||||+|++|.+++... +.++.. .|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~--- 391 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ--- 391 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC---
Confidence 99999999999999875 346654 4789999999999999999999999999999999999999999865321
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~elltG~ 895 (934)
......+.+||+.|||||++.+. +..++|+||+|++++.|.++.
T Consensus 392 ------------------------~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 392 ------------------------DCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred ------------------------CCccccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence 11223467899999999999764 567899999999887665443
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.9e-25 Score=261.92 Aligned_cols=194 Identities=16% Similarity=0.164 Sum_probs=146.7
Q ss_pred ccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCccceeEEEEeCCeEEE
Q 002342 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 746 (934)
...+.||+|+||.||++. ..+..+++|.......... ...+.+.+|+++|++++||||+.+..++...+..||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 445689999999999994 4678899998765333222 224557899999999999999966666667777899
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCC
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 826 (934)
|||||+|++|.+++.. +..++.||+.+|.|||++||+||||||+|||++. .+||+|||+|+.......
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999999999865 4578999999999999999999999999999998 999999999965421100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCCCccchhhhcC--CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
. . ........+++||+.|||||++.. ..|+..+|+||..+-.++-+.++.+|.
T Consensus 485 --------~-~-----------~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 --------K-A-----------VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --------H-H-----------HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --------c-c-----------cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 0 0 000011236689999999999977 567778999999999999988887774
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=6e-23 Score=223.18 Aligned_cols=135 Identities=17% Similarity=0.107 Sum_probs=109.9
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccCh---------------HHHHHHHHHHHHHHhCCCCCccc
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------NKVHRACAEREILDMLDHPFVPA 733 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~---------------~~~~~~~~E~~il~~l~hp~Iv~ 733 (934)
..|.+.+.||+|+||.||+|.+ .+|+.||||++........ .....+.+|+.+|+.++ | +.
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 4466669999999999999999 8899999999875321110 23456889999999999 4 56
Q ss_pred eeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEE
Q 002342 734 LYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 813 (934)
Q Consensus 734 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~~vkl~ 813 (934)
+++++.. +..|+|||||+|++|.+ +.. .....++.|++.||.|||++||+||||||+|||++ +|.+||+
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence 6665544 45699999999999998 422 13456899999999999999999999999999999 9999999
Q ss_pred ecccC
Q 002342 814 DFDLS 818 (934)
Q Consensus 814 DFG~a 818 (934)
|||+|
T Consensus 235 DFG~a 239 (282)
T 1zar_A 235 DFPQS 239 (282)
T ss_dssp CCTTC
T ss_pred ECCCC
Confidence 99998
No 255
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.80 E-value=1e-19 Score=204.61 Aligned_cols=107 Identities=11% Similarity=0.010 Sum_probs=98.4
Q ss_pred cccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 002342 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (934)
Q Consensus 482 ~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~w 561 (934)
.+.++..|.+|. |+|||++++.++||+++|++|+++..++||++.......+...+..|.....+++++++||..+|
T Consensus 251 ~~f~~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSLEWK---FLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECTTSB---EEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcCCce---EEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 456777888777 99999999999999999999999999999999888888888888888877889999999999999
Q ss_pred EEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 562 NLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 562 v~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
+..+..|++|. .|++.+++|+.+|||+++.
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~ 358 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 358 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHh
Confidence 99999999998 7999999999999999876
No 256
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.79 E-value=4e-19 Score=201.43 Aligned_cols=108 Identities=12% Similarity=0.062 Sum_probs=93.6
Q ss_pred ccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc-EEEEEEEEecCCcE
Q 002342 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLINYTKSGKK 559 (934)
Q Consensus 481 ~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~-~~~e~~~~~kdG~~ 559 (934)
..+.++..|.+|. ++|||++++.++||+++|++|+++..++||++...+.+.+...+..+.. ...+++++++||.+
T Consensus 277 ~~~fi~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAIDGK---FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECTTSB---EEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECCCCE---EEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4567888899888 9999999999999999999999999999999988888888777766554 56799999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 560 ~wv~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
+|+..+..+++|. .|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 7899999999999999985
No 257
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.77 E-value=4.7e-18 Score=158.55 Aligned_cols=119 Identities=26% Similarity=0.460 Sum_probs=109.1
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE
Q 002342 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (934)
Q Consensus 186 ~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (934)
+++++|+.++++++++|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (120)
T 2gj3_A 2 LLPEIFRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSG 78 (120)
T ss_dssp CCHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHhCCCeEEEECC---CCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 4567899999999999999998 7779999999999999999999999988887777766667788888888999999
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhH
Q 002342 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (934)
Q Consensus 266 e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk 307 (934)
++..+++||+.+|+.+++.|++|.+|.+.+++++++|||++|
T Consensus 79 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 79 VLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 999999999999999999999999999999999999999975
No 258
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=6.3e-19 Score=188.93 Aligned_cols=140 Identities=18% Similarity=0.108 Sum_probs=108.5
Q ss_pred CcccccccccCCcEEEEEEEEecCCeE--EEEEEeecccccC---------------------hHHHHHHHHHHHHHHhC
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLN---------------------RNKVHRACAEREILDML 726 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~--vAlK~~~~~~~~~---------------------~~~~~~~~~E~~il~~l 726 (934)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++.....- ......+.+|+.+|..+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999999888999 9999976532110 01123577899999999
Q ss_pred CCCCc--cceeEEEEeCCeEEEEEEccCC-C----CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCC
Q 002342 727 DHPFV--PALYASFQTKTHVCLITDYCPG-G----ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLK 798 (934)
Q Consensus 727 ~hp~I--v~l~~~~~~~~~~~lV~E~~~g-g----sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH-~~giiHrDLK 798 (934)
.|+++ +.+++. +..||||||+.+ | +|.++... .++..+..++.||+.+|.||| +.||+|||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk 198 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLS 198 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence 88754 444432 356899999932 3 55555422 234567889999999999999 9999999999
Q ss_pred CCCEEEecCCcEEEEecccCcc
Q 002342 799 PENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 799 p~NILl~~~~~vkl~DFG~a~~ 820 (934)
|+|||++. .++|+|||+|..
T Consensus 199 p~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEE
T ss_pred HHHEEEcC--cEEEEECccccc
Confidence 99999997 999999999854
No 259
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.74 E-value=2.5e-17 Score=153.61 Aligned_cols=115 Identities=24% Similarity=0.388 Sum_probs=107.0
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.|+.++++++++|+++|.+|+ |+|+|++|++++||+.+|++|++...+.+++........+...+..+..+..+++.
T Consensus 6 ~~~~~~~~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 82 (120)
T 2gj3_A 6 IFRQTVEHAPIAISITDLKAN---ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVN 82 (120)
T ss_dssp HHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHhCCCeEEEECCCCC---EEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEE
Confidence 488999999999999999888 99999999999999999999999888888777776777788888888899999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk 590 (934)
+++||+.+|+.+++.|++|.+|.+.+++++++|||++|
T Consensus 83 ~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 83 RRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp ECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 99999999999999999999999999999999999986
No 260
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.74 E-value=1.7e-17 Score=173.80 Aligned_cols=162 Identities=23% Similarity=0.442 Sum_probs=138.9
Q ss_pred hceeeeccCCCCCcceEEecccCCCCCCCCCCcccCCCCCceEEEecccccccccccccchHHHHHHHHHhccCcEEEEe
Q 002342 127 WGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSD 206 (934)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D 206 (934)
|...+.-.+..|..-|+........+.+|.+. +.+++..|||++|+++++|+ .++.++++++++|+++|
T Consensus 60 ~~~e~~~~~~dG~~~~~~~~~~p~~d~~g~~~-------~~~~~~~DIT~~k~~e~~l~----~~~~~~~~~~~~i~~~d 128 (227)
T 3ewk_A 60 WQGEFCNRRKDGTRYWVDSTIVPLMDNAGKPR-------QYISIRRDITAQKEAEAQLA----RLKQAMDANSEMILLTD 128 (227)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEECSSSCEE-------EEEEEEEECTTTTHHHHHHH----HHHHHHHTCCSEEEEEC
T ss_pred EEEEEEEEcCCCCEEeeeeEEEEEEcCCCCEE-------EEEEEEEehhhHHHHHHHHH----HHHHHHhcCcCeEEEEc
Confidence 44445556677777777766666555555433 36677799999999888774 56778999999999999
Q ss_pred CCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCc------EEEEE
Q 002342 207 ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGT------PFWNL 280 (934)
Q Consensus 207 ~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~------~~wv~ 280 (934)
. +|+|+++|++|++++||+.+|++|+++..+.++.........+++.+..+..|.+++..++|||+ .+|++
T Consensus 129 ~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~ 205 (227)
T 3ewk_A 129 R---AGRIIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAE 205 (227)
T ss_dssp T---TSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEE
T ss_pred C---CCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEE
Confidence 8 77799999999999999999999999998888888888999999999999999999999999997 89999
Q ss_pred EEeeeeecCCCCEEEEEEEEec
Q 002342 281 LTIAPIKDDEGKVLKFIGMQVE 302 (934)
Q Consensus 281 ~s~~pi~d~~G~v~~~v~~~~D 302 (934)
++++|++|.+|.+.+++++++|
T Consensus 206 ~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 206 ISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp EEEEEEECSSSCEEEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEecC
Confidence 9999999999999999999988
No 261
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.74 E-value=2.4e-17 Score=156.48 Aligned_cols=121 Identities=41% Similarity=0.739 Sum_probs=105.8
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEe
Q 002342 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (934)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (934)
+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999985545589999999999999999999999988777777777777788888888888999999999
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 272 kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
+||+.+|+.+++.|+.+.+ +.+++++++|||++|++|++|+
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~ 122 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLE 122 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHH
Confidence 9999999999999998765 8899999999999999999987
No 262
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.74 E-value=3e-17 Score=150.73 Aligned_cols=108 Identities=60% Similarity=1.139 Sum_probs=100.6
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (934)
++++|+++|....+|+|+|+|++|++++||+.+|++|+++..+.++.........++.++..+..+.++++.++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 67899999976668899999999999999999999999988888887777778889999999999999999999999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecchh
Q 002342 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (934)
Q Consensus 278 wv~~s~~pi~d~~G~v~~~v~~~~DITe 305 (934)
|++++++|++|++|.+.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999995
No 263
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.72 E-value=8.9e-17 Score=157.74 Aligned_cols=141 Identities=40% Similarity=0.715 Sum_probs=119.3
Q ss_pred ccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHH
Q 002342 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (934)
Q Consensus 174 it~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i 253 (934)
..+++++++++...++.|+.++++++++|+++|....+|+|+++|++|++++||+.++++|+++..+.+++........+
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 20 TDNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp -----------CCCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred ehhhhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 44566778889999999999999999999999974335779999999999999999999999988888888888888888
Q ss_pred HHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
...+..+..+..++..++++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++...+
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999876644
No 264
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.71 E-value=6e-17 Score=172.96 Aligned_cols=136 Identities=38% Similarity=0.609 Sum_probs=110.8
Q ss_pred cccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHH
Q 002342 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (934)
Q Consensus 175 t~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~ 254 (934)
.....++++++++++.|+.++++++++|+++|..+.+|+|+|+|++|++++||+++|++|+++..+.+++........+.
T Consensus 49 ~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~ 128 (258)
T 3p7n_A 49 PGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIR 128 (258)
T ss_dssp ------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHH
T ss_pred CcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHH
Confidence 34444566799999999999999999999999855567799999999999999999999999998888888888888899
Q ss_pred HHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHH
Q 002342 255 ETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (934)
Q Consensus 255 ~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (934)
..+..+..+..+++.+++||+.+|+.+++.|++|++|.+.+++++++|||++|+.+
T Consensus 129 ~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~~ 184 (258)
T 3p7n_A 129 QGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNM 184 (258)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-------
T ss_pred HHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhhh
Confidence 99999999999999999999999999999999999999999999999999995443
No 265
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.70 E-value=1.4e-16 Score=151.16 Aligned_cols=116 Identities=47% Similarity=0.848 Sum_probs=100.7
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~ 554 (934)
+.++++++++|+++|.+|.+++|+|+|++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35788999999999997733459999999999999999999999988888887777777788888888888999999999
Q ss_pred cCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 555 kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
+||+.+|+.+++.|+++++ +.+++++++|||++|++
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~ 117 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEY 117 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHH
Confidence 9999999999999999765 78899999999999984
No 266
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.70 E-value=2.6e-16 Score=144.43 Aligned_cols=108 Identities=45% Similarity=0.912 Sum_probs=98.1
Q ss_pred ccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (934)
Q Consensus 481 ~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~ 560 (934)
++++|+++|....+++|+|+|++|++++||+.+|++|+++..+.++.......+.++..+..+..+..+++.++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 57899999964333449999999999999999999999988888888777778888999999999999999999999999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEEcCCc
Q 002342 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (934)
Q Consensus 561 wv~~~~~pi~de~G~v~~~vgi~rDITe 588 (934)
|+.+++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999996
No 267
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.69 E-value=1.4e-16 Score=158.85 Aligned_cols=128 Identities=27% Similarity=0.501 Sum_probs=116.8
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEE
Q 002342 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (934)
Q Consensus 187 ~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (934)
..+.|+.++++++++|+++|....+|+|+++|++|++++||+.+|++|+++..+.+++........+...+..+..+..+
T Consensus 5 ~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 5 QFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 44688999999999999999842238899999999999999999999999888888888888888899999999999999
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 267 ~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|++|++++
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~~~ 132 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEAAA 132 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999988843
No 268
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.69 E-value=2.4e-16 Score=157.08 Aligned_cols=120 Identities=28% Similarity=0.504 Sum_probs=112.6
Q ss_pred cHHHHHHhccccEEEEcCC---CCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 002342 473 DLATTLERIEKNFVITDPR---LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~---G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e 549 (934)
.|+.++++++++|+++|.+ |+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+
T Consensus 8 ~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 8 KIRAVFDRSGVALTLVDMSLPEQP---VVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHCSSCCEEEETTSTTCC---EEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCcEEEEecCCCCCc---EEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 3899999999999999998 77 99999999999999999999999998999988888888888999999999999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccccc
Q 002342 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (934)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~ 595 (934)
++..+++|..+|+.+++.|+++.+|.+.+++++++|||++|++|.+
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 9999999999999999999999999999999999999999997655
No 269
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=99.68 E-value=4.1e-16 Score=172.26 Aligned_cols=108 Identities=7% Similarity=0.003 Sum_probs=94.5
Q ss_pred cccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc-----EEEEEEEEecC
Q 002342 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-----VTVQLINYTKS 556 (934)
Q Consensus 482 ~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~-----~~~e~~~~~kd 556 (934)
.+.++..|.+|. ++|+|+++..++||+++|++|+++..++||++.....+.+...+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~dG~---~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTATGI---ISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEETTCB---EEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECCCCe---EEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 456778899888 9999999999999999999999999999999988888888888876664 35789999999
Q ss_pred CcEEEEEEEEEeeecCC-CCEEEEEEEEEcCCccccc
Q 002342 557 GKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 557 G~~~wv~~~~~pi~de~-G~v~~~vgi~rDITerk~~ 592 (934)
|..+|++.+.++++|.. +++.+++|+-+.|+.....
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~~~ 267 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQC 267 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCSSS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCCCC
Confidence 99999999999999865 5777899999998887653
No 270
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.68 E-value=3.2e-16 Score=151.00 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=112.8
Q ss_pred ccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCC--CCCCCCCCCCChHHHHHHHHHHhc
Q 002342 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETLQN 259 (934)
Q Consensus 182 ~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~--~~~~l~~~~~~~~~~~~i~~~l~~ 259 (934)
++|++++++|+.+++++++++|.+|. ++.++++|+++++++||+.+++.+. .+..++||++.......+...+..
T Consensus 2 ~aL~~se~rl~~~~~~~~~g~w~~d~---~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~ 78 (142)
T 3mr0_A 2 NALSASEERFQLAVSGASAGLWDWNP---KTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEH 78 (142)
T ss_dssp -------CCHHHHHHHTTCEEEEECT---TTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCcEEEEEEc---CCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhC
Confidence 46888999999999999999999998 5669999999999999999998773 345678899888888888889998
Q ss_pred CCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhc
Q 002342 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 260 g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
+..+..+++.+++||..+|+.....|++|.+|.+.+++|+++|||++|++|++|+.
T Consensus 79 ~~~~~~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~ 134 (142)
T 3mr0_A 79 RDTYDVEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRV 134 (142)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999874
No 271
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.67 E-value=1.8e-16 Score=147.62 Aligned_cols=115 Identities=12% Similarity=0.166 Sum_probs=101.0
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHh-cCCcEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID-NQTDVTVQLIN 552 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~-~~~~~~~e~~~ 552 (934)
+..+++++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+. .+..+..|+++
T Consensus 4 ~~ll~e~~~d~i~~~d~~g~---i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~ 80 (121)
T 3f1p_B 4 KGLNVCQPTRFISRHNIEGI---FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF 80 (121)
T ss_dssp ----CCCCCEEEEEECTTSB---EEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEE
T ss_pred ccceecCCCceEEEECCCce---EEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 45678999999999999888 999999999999999999999999999999998888888877774 45578999999
Q ss_pred EecCCcEEEEEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
+++||+.+|+.++..|++|. .|.+.+++|+.+|||++|+
T Consensus 81 ~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 81 RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp ECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 99999999999999999987 7889999999999999987
No 272
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.67 E-value=3.4e-16 Score=167.06 Aligned_cols=132 Identities=32% Similarity=0.547 Sum_probs=107.3
Q ss_pred CchhhHHHHHhhhhc-ccHHHHHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHH
Q 002342 457 DSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532 (934)
Q Consensus 457 dv~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~ 532 (934)
.+..+...+++++.. ..|+.++++++++|+++|. +|+ |++||++|++++||+.+|++|+++..+.++++....
T Consensus 47 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~ 123 (258)
T 3p7n_A 47 GAPGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNP---LIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWL 123 (258)
T ss_dssp --------------CCHHHHHHHHTCSSEEEEECTTSTTCC---EEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHH
T ss_pred cCCcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCc---EEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhH
Confidence 344445555666555 5699999999999999999 666 999999999999999999999999999999988888
Q ss_pred HHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 533 VRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 533 ~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
...+...+..+..+..+++.+++||..+|+.+++.|++|++|.+.+++++++|||++|+
T Consensus 124 ~~~~~~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 124 TDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp HHHHHHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred HHHHHHHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 88889999999999999999999999999999999999999999999999999999965
No 273
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.65 E-value=7.8e-16 Score=143.91 Aligned_cols=122 Identities=35% Similarity=0.679 Sum_probs=105.8
Q ss_pred HHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecC
Q 002342 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (934)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (934)
++++++++|+++|..+.+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++..+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46788999999997443667999999999999999999999998888888888888888889999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhc
Q 002342 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 274 G~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
|..+|+.+++.|+.+.+|.+.+++++++|||++|+++++.+.
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999988663
No 274
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.65 E-value=2.3e-16 Score=146.96 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=99.8
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHh-cCCcEEEEEE
Q 002342 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGRLL 268 (934)
Q Consensus 190 ~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~-~g~~~~~e~~ 268 (934)
.+..+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..+++
T Consensus 3 ~~~ll~e~~~d~i~~~d~---~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r 79 (121)
T 3f1p_B 3 FKGLNVCQPTRFISRHNI---EGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFR 79 (121)
T ss_dssp -----CCCCCEEEEEECT---TSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred cccceecCCCceEEEECC---CceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 345688999999999998 778999999999999999999999999888999988877788877774 4557889999
Q ss_pred EEecCCcEEEEEEEeeeeecC-CCCEEEEEEEEecchhhHH
Q 002342 269 NYKKDGTPFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (934)
Q Consensus 269 ~~~kdG~~~wv~~s~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (934)
.+++||+.+|++++..|++|. +|.+.+++++.+|||++|+
T Consensus 80 ~~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 80 FRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp EECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EEecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 999999999999999999987 7888999999999999886
No 275
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.65 E-value=6.6e-16 Score=151.45 Aligned_cols=129 Identities=47% Similarity=0.796 Sum_probs=112.3
Q ss_pred hHHHHHhhhhc-ccHHHHHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHH
Q 002342 461 DKVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKI 536 (934)
Q Consensus 461 r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i 536 (934)
+...+++++.. ..|+.++++++++|+++|. +|. |+++|++|++++||+.++++|+++..+.+++........+
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 23 PSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNP---IVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp --------CCCCCHHHHHHHHTTSCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCc---EEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 34445555544 5699999999999999999 688 9999999999999999999999998888888888888888
Q ss_pred HHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 537 RAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 537 ~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
...+..+..+..++...+++|..+|+.+++.|+++++|.+.+++++++|||++|++
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~ 155 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAK 155 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHH
Confidence 88888999999999999999999999999999999999999999999999999984
No 276
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.64 E-value=5.4e-16 Score=143.35 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=101.5
Q ss_pred hccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcE
Q 002342 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559 (934)
Q Consensus 480 ~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~ 559 (934)
++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+..+..+..|++++++||+.
T Consensus 7 ~~~~~i~~~d~~g~---i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 83 (117)
T 3f1p_A 7 DSKTFLSEHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGY 83 (117)
T ss_dssp GGGEEEEEECTTCB---EEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSE
T ss_pred CCccEEEEECCCce---EEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCE
Confidence 35789999999888 999999999999999999999999999999998888888888888888888899999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 560 ~wv~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
+|+.++..|++|+ +|.+.+++|+.+|||++|+
T Consensus 84 ~w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 84 VWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 9999999999998 8899999999999999987
No 277
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.64 E-value=2.5e-15 Score=144.69 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=108.4
Q ss_pred cccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCC--CCcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 471 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 471 ~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~--~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
+..|+.+++.+++++|.+|..+. ++++|+++++++||+.+++.+. .+..++||++...+...+...+..+..+..
T Consensus 8 e~rl~~~~~~~~~g~w~~d~~~~---~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~ 84 (142)
T 3mr0_A 8 EERFQLAVSGASAGLWDWNPKTG---AMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDV 84 (142)
T ss_dssp -CCHHHHHHHTTCEEEEECTTTC---CEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHhCCcEEEEEEcCCC---eEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEE
Confidence 36699999999999999999888 9999999999999999998873 466788999998888888888988889999
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
|+++.+++|..+|+.....|++|.+|.+.+++|+++|||++|++|
T Consensus 85 e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E 129 (142)
T 3mr0_A 85 EYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDE 129 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHH
T ss_pred EEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHH
Confidence 999999999999999999999999999999999999999999953
No 278
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.64 E-value=3.8e-16 Score=147.70 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=101.4
Q ss_pred cccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHH
Q 002342 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (934)
Q Consensus 175 t~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~ 254 (934)
|+++++|++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~---~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECC---CCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 456788899999999999999999999999998 77799999999999999999999999887776655444344444
Q ss_pred HHHhcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
.....+.. ...++..++|||+.+|+++++.|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44444332 234667789999999999999999763 4456899999997
No 279
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=5e-16 Score=173.49 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=102.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeeccccc------------C--h-HH--H--HHHHHHHHHHHhCCCCC
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------N--R-NK--V--HRACAEREILDMLDHPF 730 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~------------~--~-~~--~--~~~~~E~~il~~l~hp~ 730 (934)
-|.+.++||.|+||.||+|.+ .+|+.||||+++..... . . .. . -....|...|.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 399999999999999999998 56999999998643110 0 0 00 0 01235777788775554
Q ss_pred ccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--
Q 002342 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (934)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~~~-- 808 (934)
+....-+... ..+|||||++|++|..+... .....++.||+.+|.|||++|||||||||.|||++.+|
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence 4322222222 23799999999998766432 23456789999999999999999999999999998776
Q ss_pred --------cEEEEecccCcc
Q 002342 809 --------HVSLTDFDLSCL 820 (934)
Q Consensus 809 --------~vkl~DFG~a~~ 820 (934)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 389999997754
No 280
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.62 E-value=4.7e-15 Score=144.84 Aligned_cols=132 Identities=31% Similarity=0.552 Sum_probs=119.4
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCC---ceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC
Q 002342 185 PRVSDIVKDALSTFQQTFVVSDATKPDY---PIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (934)
Q Consensus 185 ~~~~~~~~~ile~~~d~i~v~D~~~~dG---~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (934)
..+++.++.++++++++++++|. +| +|+++|++|++++||+.++++|+++..+.++.........+...+..+.
T Consensus 21 ~~~~~~~~~i~~~~~~~i~~~d~---~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (162)
T 3sw1_A 21 MINAQLLQSMVDASNDGIVVAEK---EGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGR 97 (162)
T ss_dssp CCCHHHHHHHHHTCSSEEEEEEE---ETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTC
T ss_pred cchHHHHHHHHhhccCcEEEEeC---CCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCC
Confidence 35568899999999999999998 66 7999999999999999999999999888888777778888888899999
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhcCCCC
Q 002342 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNG 319 (934)
Q Consensus 262 ~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~ 319 (934)
.+..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++|+.....
T Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~ 155 (162)
T 3sw1_A 98 PCREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRAR 155 (162)
T ss_dssp CEEEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC-
T ss_pred CCcceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998854443
No 281
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.62 E-value=2.4e-15 Score=140.56 Aligned_cols=117 Identities=44% Similarity=0.791 Sum_probs=105.0
Q ss_pred HHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 477 i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+++..
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNP---IVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINY 78 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCcccEEEecCCCCCCc---EEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46788999999999 667 999999999999999999999999888888888888888888899999999999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccC
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~ 596 (934)
+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++...
T Consensus 79 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~ 121 (128)
T 3t50_A 79 KKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSL 121 (128)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-----
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhh
Confidence 9999999999999999999999999999999999999965443
No 282
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.62 E-value=4.9e-15 Score=137.64 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=93.3
Q ss_pred ccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC
Q 002342 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (934)
Q Consensus 182 ~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (934)
+.|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.... ........+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~---~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDA---EGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGE 79 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTC
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECC---CCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCC
Confidence 45788999999999999999999998 7779999999999999999999999877665443322 2334455666777
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 262 ~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
.+..+.+.++|||+.+|+++++.|+. +|. ++++++|||
T Consensus 80 ~~~~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 80 PLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred cEEEEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 78889999999999999999999985 565 678999997
No 283
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.61 E-value=1.1e-14 Score=132.40 Aligned_cols=111 Identities=82% Similarity=1.236 Sum_probs=102.0
Q ss_pred HHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 477 i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
.+++++++|+++|. +|+ |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+.+..
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNP---IIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINY 78 (115)
T ss_dssp ---CCCCSEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCCCcEEEEcCCCCCCc---EEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEe
Confidence 46789999999999 888 999999999999999999999998888888888888888888899999999999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccc
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk 590 (934)
+++|..+|+.+++.|+++.+|.+.+++++++|||+++
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 79 TKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999999985
No 284
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.61 E-value=4.2e-15 Score=140.45 Aligned_cols=124 Identities=16% Similarity=0.202 Sum_probs=100.8
Q ss_pred hhhHHHHHhhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHH
Q 002342 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (934)
Q Consensus 459 ~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~ 537 (934)
|++++.|++++.. ..|+.++++++++|+++|.+|. |+++|+++++++||+.+|++|+++..+++++........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~~g~---i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECCCCe---EEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 5678888888766 6799999999999999999888 99999999999999999999999888887765544444444
Q ss_pred HHHhcCCc----EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 538 AAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 538 ~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
.....+.. ...++..+++||+.+|+.+++.|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44433332 245778899999999999999999764 3356899999998
No 285
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.61 E-value=7.8e-15 Score=133.34 Aligned_cols=114 Identities=41% Similarity=0.829 Sum_probs=101.7
Q ss_pred HHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecC
Q 002342 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (934)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (934)
++++++++++++|....+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++.++++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 57889999999998333566999999999999999999999998888888888888888889999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhH
Q 002342 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (934)
Q Consensus 274 G~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk 307 (934)
|+.+|+.+++.|+.+.+|.+.+++++++|||+++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999874
No 286
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.60 E-value=2.1e-15 Score=139.31 Aligned_cols=123 Identities=11% Similarity=0.015 Sum_probs=94.7
Q ss_pred cccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcC--CCCCCCCCCCCChHHHHHHHHHHhcC
Q 002342 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG--RNCRFLQGAGTDPEDVAKIRETLQNG 260 (934)
Q Consensus 183 aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG--~~~~~l~~~~~~~~~~~~i~~~l~~g 260 (934)
+|+++++.|+.++++++++++++|. +|.++++|+++++++||+.++++| ..+..+.+|++.......+...+..+
T Consensus 1 al~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 77 (125)
T 3nja_A 1 SNAMAEKLLHTAESDAGIGSWVLHM---ESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGD 77 (125)
T ss_dssp ----------------CCEEEEEET---TTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHhCCeeEEEEEc---CCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcC
Confidence 3677888999999999999999998 666999999999999999999999 44445677888777788888888988
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHH
Q 002342 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (934)
Q Consensus 261 ~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~ 308 (934)
..+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 78 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 78 RPFDVEYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred CCceEEEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 889999999999999999999999999999999999999999999875
No 287
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.60 E-value=9.5e-16 Score=141.65 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=98.6
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (934)
.++.|+++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+...+..+..+..+++.+++||+.+
T Consensus 8 ~~~~i~~~d~---~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 84 (117)
T 3f1p_A 8 SKTFLSEHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYV 84 (117)
T ss_dssp GGEEEEEECT---TCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEE
T ss_pred CccEEEEECC---CceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEE
Confidence 4577888888 7889999999999999999999999998889998888888888888888888888999999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEecchhhHH
Q 002342 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (934)
Q Consensus 278 wv~~s~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (934)
|++++..|++|+ +|.+.+++++.+|||++|+
T Consensus 85 w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 85 WLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999999998 7889999999999999875
No 288
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.60 E-value=1.6e-15 Score=140.95 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=93.5
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCC-hHHHHHHHHHHhcCCcEEEEEE
Q 002342 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD-PEDVAKIRETLQNGQSYCGRLL 268 (934)
Q Consensus 190 ~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~-~~~~~~i~~~l~~g~~~~~e~~ 268 (934)
.|+.+|++++++|+ +|. +|+|+++|++|++++||+++|++|+++..+++++.. ......+...+..+..+..+++
T Consensus 4 ~~~~~~~~~~~~i~-~~~---~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLV-LSR---DRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEE-EEE---TTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEE-Eec---CCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 47899999999996 465 788999999999999999999999998876655332 3444556667777788899999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHH
Q 002342 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (934)
Q Consensus 269 ~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~ 309 (934)
.+++||+.+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 80 ~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 999999999999999998 5666677899999999999975
No 289
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.59 E-value=2.1e-15 Score=140.09 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=94.4
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCC-HHHHHHHHHHHhcCCcEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD-PATVRKIRAAIDNQTDVTVQL 550 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~i~~~l~~~~~~~~e~ 550 (934)
.+|+.+|++++++|++ |.+|+ |+++|++|++++||+++|++|+++..+.+++.. ......+...+..+..+..|+
T Consensus 3 ~~~~~~~~~~~~~i~~-~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 78 (120)
T 3mqq_A 3 IDYKTAFHLAPIGLVL-SRDRV---IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDR 78 (120)
T ss_dssp CCHHHHHHHCSSEEEE-EETTE---EEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred chHHHHHhcCCceEEE-ecCCE---EHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEE
Confidence 3589999999999965 66777 999999999999999999999998877765432 334555666677778889999
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
++.++||+.+|+.++..|+ +.+|...+++++++|||++|+.
T Consensus 79 ~~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 79 IMKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EEECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 9999999999999999999 5566667889999999999983
No 290
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.59 E-value=1.7e-14 Score=132.61 Aligned_cols=127 Identities=75% Similarity=1.225 Sum_probs=107.3
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE
Q 002342 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (934)
Q Consensus 186 ~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (934)
+.++.++.++++++++++++|..+.+|.|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp ----CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 44567899999999999999932227789999999999999999999999988888887777777888888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHH
Q 002342 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (934)
Q Consensus 266 e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (934)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 88889999999999999999999999999999999999999988764
No 291
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.58 E-value=5.8e-15 Score=137.04 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=80.0
Q ss_pred hccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc----EEEEEEEEec
Q 002342 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKK 272 (934)
Q Consensus 197 ~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~----~~~e~~~~~k 272 (934)
+++++|+++|. +|+|+++|++|++++||+++|++|+++..+.++.........+......+.. ...++..+++
T Consensus 1 ~~~d~i~~~d~---~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECC---CCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36889999998 7779999999999999999999999988777665443333344444444332 2346677899
Q ss_pred CCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 273 dG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
||+.+|++++++|+.+. ...+++++++|||++|++|++|+
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l~ 117 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARLQ 117 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC----------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHHH
Confidence 99999999999999764 34578999999999999999876
No 292
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.58 E-value=1.8e-14 Score=131.51 Aligned_cols=121 Identities=17% Similarity=0.293 Sum_probs=107.8
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE
Q 002342 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (934)
Q Consensus 186 ~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (934)
++++.++.++++++++++++|. +|+|+++|+++++++|++.++++|+++..+.+++........+...+..+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 3lyx_A 4 DILKQRAKAFDYVFDAIVVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTG 80 (124)
T ss_dssp CHHHHHHHGGGTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEE
T ss_pred hHHHHHHHHHhhcCceEEEECC---CCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccc
Confidence 5668899999999999999998 7779999999999999999999999988777776666667778888888888999
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHH
Q 002342 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (934)
Q Consensus 266 e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~ 309 (934)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||+++++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~l 124 (124)
T 3lyx_A 81 EIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKKE 124 (124)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC---
T ss_pred eEEEEccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhcC
Confidence 99999999999999999999999999999999999999998763
No 293
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.58 E-value=7.1e-15 Score=135.78 Aligned_cols=117 Identities=13% Similarity=0.021 Sum_probs=96.7
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcC--CCCcccCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG--RNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e 549 (934)
..|+.+++.+++++|++|.+|. ++++|+++++++||+.++++| ..+..+++|++.......+...+..+..+..+
T Consensus 7 ~~l~~~~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e 83 (125)
T 3nja_A 7 KLLHTAESDAGIGSWVLHMESG---RLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVE 83 (125)
T ss_dssp ----------CCEEEEEETTTT---EEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHhCCeeEEEEEcCCC---cEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEE
Confidence 4588999999999999999888 999999999999999999999 44566788888888888888888888889999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
+++.+++|..+|+.++..|+++.+|.+.+++|+++|||++|+
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 84 YRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 999999999999999999999999999999999999999985
No 294
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.58 E-value=2.7e-14 Score=134.64 Aligned_cols=139 Identities=84% Similarity=1.238 Sum_probs=118.9
Q ss_pred HHHHHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 002342 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~ 550 (934)
|+.++++++++++++|. +|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..++
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQL 80 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCce---EEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEE
Confidence 56678999999999999 888 999999999999999999999999888888888888888888888899999999
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccCCchhhHHHHHHHHHHhhhhhhhhccc
Q 002342 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (934)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~v~~~~~e 622 (934)
...+++|..+|+.++..|+.+.+|.+.+++++++|||++|+. +...+....++.+..++...+++
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
T 2v0u_A 81 INYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRD-------AAEREGVMLIKKTAENIDEAAKE 145 (146)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCH-------HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHH-------HHHHHHHHHHHHHHhccHhhHhc
Confidence 999999999999999999999999999999999999999872 22333444555555555555543
No 295
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.58 E-value=2.5e-15 Score=146.69 Aligned_cols=125 Identities=10% Similarity=0.099 Sum_probs=105.9
Q ss_pred cchHHHHHHHHHhccCcEEEEe-CCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 185 ~~~~~~~~~ile~~~d~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
..+++.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+.+++..+...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~---~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECC---CcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 4556789999999999999999 7 788999999999999999 999999887777766556677888888888875
Q ss_pred EEEEE-E--Ee-cC-CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 264 CGRLL-N--YK-KD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 264 ~~e~~-~--~~-kd-G~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
..+.. . .+ .+ |..+|+.+++.|+++.+|.+.|++++++|||++|++|++|+
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~ 143 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAE 143 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHH
Confidence 54322 2 22 22 77899999999999999999999999999999999999986
No 296
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.56 E-value=9.2e-14 Score=127.67 Aligned_cols=119 Identities=44% Similarity=0.843 Sum_probs=107.3
Q ss_pred ccHHHHHHhccccEEEEc---CCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 472 IDLATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D---~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
..++.++++++++++++| .+|. |+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 6 ~~~~~~~~~~~~~i~~~d~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 6 QELKTALSTLQQTFVVSDATQPHCP---IVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp -CHHHHHHHTTCEEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcccceeeeeccCCCCc---EEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 348999999999999999 8777 9999999999999999999999998888888888777888888888888888
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
+....+++|..+|+.+...|+.+.+|.+.+++++++|||++|+++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e 127 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGV 127 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC---
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhh
Confidence 999999999999999999999999999999999999999999854
No 297
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.56 E-value=1e-14 Score=136.24 Aligned_cols=124 Identities=17% Similarity=0.159 Sum_probs=94.8
Q ss_pred cccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHc--CCCCCCCCCCCCChHHH
Q 002342 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV--GRNCRFLQGAGTDPEDV 250 (934)
Q Consensus 173 dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEll--G~~~~~l~~~~~~~~~~ 250 (934)
+||++++++++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++ |+++..+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcC---CCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 57899999999999999999999999999999998 77899999999999999999994 566655554 222221
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
..+.. ...+.....+....++||+.+|+.++..++.+ +|. .+++++++|||
T Consensus 76 ~~~~~-~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLSG-FSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHHT-CCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHHH-HhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 11111 12233445566778999999999998888743 343 46789999998
No 298
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=5.2e-14 Score=130.62 Aligned_cols=107 Identities=15% Similarity=0.153 Sum_probs=87.0
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
..|+.++++++++|+++|.+|+ |++||+++++++||+++|++|+++..+.++.... ........+..+..+..|.+
T Consensus 11 ~~~~~l~e~~~d~i~~~d~~g~---i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~ 86 (117)
T 2r78_A 11 NAYRALFEHAIDGIFIMDAEGH---YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGEPLREERT 86 (117)
T ss_dssp HHHHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhcCCceEEEECCCCC---EEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCCcEEEEEE
Confidence 3499999999999999999888 9999999999999999999999877665443322 22334455666777888999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
++++||+.+|+.+++.|+. +|. ++++++|||
T Consensus 87 ~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 87 VWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp EECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred EEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 9999999999999999985 565 678999998
No 299
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.55 E-value=1.9e-14 Score=133.51 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=81.6
Q ss_pred ccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc----EEEEEEEEecC
Q 002342 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTKS 556 (934)
Q Consensus 481 ~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~----~~~e~~~~~kd 556 (934)
++++|+++|.+|. |+++|+++++++||+++|++|+++..+++++........+......+.. ...++..+++|
T Consensus 2 ~~d~i~~~d~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 78 (119)
T 2vv6_A 2 IPDAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRD 78 (119)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTT
T ss_pred CcceEEEECCCCe---EEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeCC
Confidence 6899999999888 9999999999999999999999988887776544433444444433332 24577788999
Q ss_pred CcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccccc
Q 002342 557 GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (934)
Q Consensus 557 G~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~ 595 (934)
|+.+|+.++++|+.+. ...+++++++|||++|++|++
T Consensus 79 G~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~ 115 (119)
T 2vv6_A 79 GTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQAR 115 (119)
T ss_dssp SCEEEEEEEEEEEEET--TEEEEEEEEEECC--------
T ss_pred CCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHH
Confidence 9999999999999864 335689999999999996543
No 300
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.54 E-value=5.4e-14 Score=128.29 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=104.8
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.++.++++++++++++|.+|. |+++|+++++++|++.++++|+++..+.+++........+...+..+..+..+...
T Consensus 8 ~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (124)
T 3lyx_A 8 QRAKAFDYVFDAIVVTDLQGF---IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRM 84 (124)
T ss_dssp HHHHGGGTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred HHHHHHhhcCceEEEECCCCc---EeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEE
Confidence 488999999999999999888 99999999999999999999999887767766666677788888888889999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccc
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~ 591 (934)
.+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 85 LHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp ECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred EccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 999999999999999999999999999999999999986
No 301
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.54 E-value=6.4e-15 Score=144.07 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=99.5
Q ss_pred ccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC
Q 002342 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (934)
Q Consensus 182 ~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (934)
+++++++.+|+.+++++++||+++|. +|+|++||+++++++|++++|++|+++..+++. ........++.++..|.
T Consensus 15 ~~~~~~~~~l~~il~~~~~gi~v~D~---~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~ 90 (152)
T 3mxq_A 15 NAMAKSRLLLSELLDQLSFALCIVRN---DYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIES 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEET---TSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcC---CCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCC
Confidence 35778888899999999999999998 788999999999999999999999999877777 55556677888898887
Q ss_pred cEEEE---------EE---EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHH
Q 002342 262 SYCGR---------LL---NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (934)
Q Consensus 262 ~~~~e---------~~---~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (934)
+.... +. ...++|..+|..++++|++|++|.+.|++.+++|||+++.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 91 SSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp CEEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred ceeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 53221 11 123677888999999999999999999999999999998753
No 302
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.54 E-value=4.2e-14 Score=156.75 Aligned_cols=116 Identities=89% Similarity=1.304 Sum_probs=108.4
Q ss_pred HHHHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 475 ATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
..++++++++|+++|. +|+ |+++|++|++++||+++|++|+++..+.+++......+.+...+..+..+..+++
T Consensus 14 ~~~~~~~~~~i~~~D~~~~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 90 (332)
T 2wkq_A 14 ATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLI 90 (332)
T ss_dssp CCCGGGCCSEEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhHhhcCCCcEEEecCCCCCCC---EEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEE
Confidence 3467889999999999 888 9999999999999999999999999999988888888888999999999999999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+.+
T Consensus 91 ~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e 132 (332)
T 2wkq_A 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDA 132 (332)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHH
T ss_pred EEcCCCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhh
Confidence 999999999999999999999999999999999999999854
No 303
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.54 E-value=1.2e-14 Score=133.79 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=97.4
Q ss_pred ccccEEEEcC-CCCCCCEEEccHHHHHHcCCChhhhcCCC-CcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCc
Q 002342 481 IEKNFVITDP-RLPDNPIIFASDSFLELTEYSREEILGRN-CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK 558 (934)
Q Consensus 481 ~~d~i~v~D~-~G~~~~I~~vN~a~~~l~Gys~eEliG~~-~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~ 558 (934)
+++++|.+|. .|. ++|+|+++++++||++++++|.. +..++||++...+...+...+..+..+..|++++++||+
T Consensus 2 a~~giw~~d~~~~~---~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~ 78 (115)
T 3h9w_A 2 TKAIPWKINWQTMA---FEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGH 78 (115)
T ss_dssp -CCEEEEEETTTTE---EEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSC
T ss_pred cceEEEEEEcCCCc---EEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCC
Confidence 5789999994 455 99999999999999999999832 356789998888888888889888899999999999999
Q ss_pred EEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 559 KFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 559 ~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
.+|+..+..|++|++|++++++|++.|||++|++|
T Consensus 79 ~~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~ 113 (115)
T 3h9w_A 79 YVWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHH 113 (115)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEECGGGGC--
T ss_pred EEEEEEEEEEEECCCCCEEEEEEEEeccCcccccc
Confidence 99999999999999999999999999999999964
No 304
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.53 E-value=3.9e-14 Score=157.02 Aligned_cols=122 Identities=39% Similarity=0.789 Sum_probs=111.8
Q ss_pred HHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEec
Q 002342 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (934)
Q Consensus 193 ~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~k 272 (934)
.++++++++|+++|....+|+|+|+|++|++++||+++|++|+++..+.+++........+...+..+..+..+++.+++
T Consensus 15 ~~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 94 (332)
T 2wkq_A 15 TTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTK 94 (332)
T ss_dssp CCGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECT
T ss_pred hHhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcC
Confidence 35789999999999844466799999999999999999999999998888888888888899999999999999999999
Q ss_pred CCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 273 dG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
||+.+|+++++.|++|.+|.+.+++++++|||++++.+++++
T Consensus 95 dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~~ 136 (332)
T 2wkq_A 95 SGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAERE 136 (332)
T ss_dssp TCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHH
T ss_pred CCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhcc
Confidence 999999999999999999999999999999999999887765
No 305
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.53 E-value=6.7e-14 Score=127.02 Aligned_cols=113 Identities=12% Similarity=0.119 Sum_probs=93.1
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (934)
+++|+.++++++++++++|. +|+|+++|++|++++||+.++++|+++..++ ++........+...+.++.....+.
T Consensus 2 e~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDR---EMRYLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEED 77 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEET---TCBEEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcC---CcEEEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeee
Confidence 57899999999999999998 7779999999999999999999999987666 4555555555555555443333344
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 268 ~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
...+++|..+|+.++..|+++.+|.+.+++++++|||
T Consensus 78 ~~~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 78 CFVRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EEEC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 7788999999999999999999999999999999997
No 306
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.52 E-value=2.7e-14 Score=139.28 Aligned_cols=120 Identities=10% Similarity=0.084 Sum_probs=101.1
Q ss_pred hhhcccHHHHHHhccccEEEEc-CCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcE
Q 002342 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (934)
Q Consensus 468 l~~~~~l~~i~e~~~d~i~v~D-~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~ 546 (934)
++....|+.++++++++|+++| .+|+ |+++|+++++++||+ +++|+++..++++.........+...+..+...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCcE---eHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 5555679999999999999999 8777 999999999999999 999999888888766655667778888778775
Q ss_pred EEEEE-E--EecC--CcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 547 TVQLI-N--YTKS--GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 547 ~~e~~-~--~~kd--G~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
..+.. . .+.+ |..+|+.+++.|+++.+|.+.+++++++|||++|++
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~ 138 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRA 138 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHH
Confidence 54432 2 2222 778999999999999999999999999999999984
No 307
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.51 E-value=5.8e-14 Score=137.04 Aligned_cols=118 Identities=33% Similarity=0.571 Sum_probs=109.6
Q ss_pred ccHHHHHHhccccEEEEcCCC---CCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 472 IDLATTLERIEKNFVITDPRL---PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G---~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
..++.++++++++|+++|.+| + |+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 25 ~~~~~i~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (162)
T 3sw1_A 25 QLLQSMVDASNDGIVVAEKEGDDTI---LIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCRE 101 (162)
T ss_dssp HHHHHHHHTCSSEEEEEEEETTEEE---EEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhhccCcEEEEeCCCCccE---EEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCCcc
Confidence 348999999999999999988 7 9999999999999999999999998888888777777888888888999999
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++|++
T Consensus 102 ~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~ 145 (162)
T 3sw1_A 102 VLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVEL 145 (162)
T ss_dssp EEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHH
T ss_pred eEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHH
Confidence 99999999999999999999999999999999999999999984
No 308
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.51 E-value=2.4e-14 Score=131.78 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=97.1
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCC-CCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~-~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~ 276 (934)
+++++|.+|.. +|+++|+|+++++++||++++++|.. +..+++|++.......+...+..+..+..+++.+++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 46889999953 67799999999999999999999832 2357788888888888888899888899999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHH
Q 002342 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (934)
Q Consensus 277 ~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (934)
+|+..+..|++|++|.+.+++|++.|||++|++|+
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 99999999999999999999999999999999875
No 309
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.51 E-value=3.4e-14 Score=143.46 Aligned_cols=124 Identities=10% Similarity=0.125 Sum_probs=102.7
Q ss_pred cchHHHHHHHHHhccCcEEEEe-CCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 185 ~~~~~~~~~ile~~~d~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
..+++.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~---~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECC---CcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 5667899999999999999999 7 788999999999999999 999999887777766655667788888888876
Q ss_pred EEEEEEE---ecC--CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHh
Q 002342 264 CGRLLNY---KKD--GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (934)
Q Consensus 264 ~~e~~~~---~kd--G~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L 313 (934)
..+.... +++ |..+|+.+++.|++|.+|.+.+++++++|||++|++|+++
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~ 162 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA 162 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC--
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHH
Confidence 5543222 222 7789999999999999999999999999999999999983
No 310
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.51 E-value=1.1e-13 Score=129.15 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=94.2
Q ss_pred CchhhHHHHHhhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhh--cCCCCcccCCCCCCHHHH
Q 002342 457 DSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI--LGRNCRFLQGPETDPATV 533 (934)
Q Consensus 457 dv~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEl--iG~~~~~l~~~~~~~~~~ 533 (934)
++|+|++.|++|+.. ..|+.++++++++|+++|.+|+ |+++|+++++++||+.+|+ +|++...+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDADGT---ICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcCCCC---EEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 478999999999766 6799999999999999999888 9999999999999999999 5676666665 222222
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 534 ~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
..+. ....+.....+.++.++||..+|+.++..++.+ +|. ..++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 2211 112334456677788999999999988888743 444 45789999998
No 311
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.50 E-value=2.5e-14 Score=139.87 Aligned_cols=122 Identities=15% Similarity=0.193 Sum_probs=95.9
Q ss_pred hhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc
Q 002342 467 EMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD 545 (934)
Q Consensus 467 ~l~~~-~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~ 545 (934)
++++. ..|+.+++++++||+++|.+|+ |++||+++++++|++++|++|+++.+++++ ....+...+..++..|.+
T Consensus 16 ~~~~~~~~l~~il~~~~~gi~v~D~~g~---I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~ 91 (152)
T 3mxq_A 16 AMAKSRLLLSELLDQLSFALCIVRNDYV---IVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESS 91 (152)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEETTSB---EEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEcCCCE---EEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCc
Confidence 34433 3489999999999999999888 999999999999999999999999888877 555566778888887765
Q ss_pred EEEE---------EEE---EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 546 VTVQ---------LIN---YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 546 ~~~e---------~~~---~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
.... +.. ..++|..+|..+++.|++|++|++.+++++++|||+++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a 150 (152)
T 3mxq_A 92 SFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQ 150 (152)
T ss_dssp EEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC---
T ss_pred eeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhc
Confidence 3221 111 2356778899999999999999999999999999999873
No 312
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.50 E-value=5.6e-14 Score=128.83 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=98.1
Q ss_pred ccccccchHHHHHHHHHhccCcEEEEeCCCCC-CceEEcchHHHHHcCCChhhHcCCC--CCCCCCCCCChHHHHHHHHH
Q 002342 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRET 256 (934)
Q Consensus 180 ~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~i~~~ 256 (934)
++++|+++++.|+.++++++++++++|. + |+++++|+++++++||+.++++|.. +..+.++++.......+..
T Consensus 2 ~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (125)
T 3eeh_A 2 AKQQAAKSERRVRELTEATNDILWEFTA---DLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS- 77 (125)
T ss_dssp --------CHHHHHHHSCCCCEEEEEET---TSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEc---CCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-
Confidence 5677889999999999999999999998 5 7799999999999999999999987 3445566554444455544
Q ss_pred HhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 78 ~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 78 LMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp HHTTCCEEEEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred HHcCCCccEEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 667777888999999999999999999999999999999999999997
No 313
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.49 E-value=2e-13 Score=123.80 Aligned_cols=111 Identities=15% Similarity=0.140 Sum_probs=92.8
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..++ |+........+...+.++.....+..+
T Consensus 4 ~~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (114)
T 3luq_A 4 RLRLFTEHAPAALAMFDREMR---YLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEEDCF 79 (114)
T ss_dssp HHHHHHHTCSSEEEEEETTCB---EEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHhcCCceEEEEcCCcE---EEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeeeEE
Confidence 488999999999999999888 9999999999999999999999988777 555565555666655544433444478
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
.+++|..+|+.++..|+++.+|.+.+++++++|||
T Consensus 80 ~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 80 VRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 89999999999999999999999999999999998
No 314
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=99.49 E-value=1.6e-12 Score=142.06 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=89.9
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEecCCcE
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTKSGKK 559 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~---~~~e~~~~~kdG~~ 559 (934)
+-+...+.+|+ ++|+|+++..++||.++|++|+++..++||++.....+.+...+..+.. ...+++++++||..
T Consensus 175 ~Fitrh~~dG~---~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTPGCV---FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecCCCe---EEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 45666778777 9999999999999999999999999999999999888888888887654 35789999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 560 ~wv~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
+|++....+++|. .+++.+++|.-+-|+....
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~p~~ 284 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTSPLN 284 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCCCSS
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccCCCC
Confidence 9999999999986 4667788888775555443
No 315
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.48 E-value=5.5e-14 Score=141.91 Aligned_cols=141 Identities=11% Similarity=0.123 Sum_probs=100.5
Q ss_pred hhhcccHHHHHHhccccEEEEc-CCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcE
Q 002342 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (934)
Q Consensus 468 l~~~~~l~~i~e~~~d~i~v~D-~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~ 546 (934)
++....|+.++++++++|+++| .+|+ |+++|+++++++||+ +++|+++..++++.........+..++..+...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~~g~---i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECCCcE---EEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 4444669999999999999999 8777 999999999999999 999999888888776655566777788778776
Q ss_pred EEEEEEE---ecC--CcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccCCchhhHHHHHHHHHHhhhh
Q 002342 547 TVQLINY---TKS--GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAEN 615 (934)
Q Consensus 547 ~~e~~~~---~kd--G~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~ 615 (934)
..+.... +++ |..+|+.+++.|+++.+|.+.+++++++|||++|++|++. ...+++.++.++.+..+
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~--~~ll~~~~~~l~~~~~~ 179 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA--EARVEELSERYRNVRDS 179 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC---------------------
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHH--HHHHHHHHHHHHHHHhh
Confidence 5543222 222 7889999999999999999999999999999999975542 12344455554444443
No 316
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.48 E-value=2.2e-13 Score=126.06 Aligned_cols=114 Identities=13% Similarity=0.110 Sum_probs=98.7
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhc-CCcEEEEEEEE
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-QTDVTVQLINY 553 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~-~~~~~~e~~~~ 553 (934)
.+++++++++|+++|.+|+ |+++|+++++++||+.+|++|+++..+++|++.......+...+.. +.....+++++
T Consensus 6 ~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 82 (121)
T 2kdk_A 6 GEINVKPTEFITRFAVNGK---FVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFR 82 (121)
T ss_dssp TCCCCCSSEEEEEECTTSB---EEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred cccccCCccEEEEECCCee---EEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 3466788999999999888 9999999999999999999999988899998877777777776765 44468899999
Q ss_pred ecCCcEEEEEEEEEeeecCC-CCEEEEEEEEEcCCcccc
Q 002342 554 TKSGKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~-G~v~~~vgi~rDITerk~ 591 (934)
++||+.+|+.++..|++|.. |.+.+++++.+||++.++
T Consensus 83 ~~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~~ 121 (121)
T 2kdk_A 83 AKDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHSE 121 (121)
T ss_dssp CSSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCCC
T ss_pred EcCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccCC
Confidence 99999999999999999886 567789999999999763
No 317
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.46 E-value=6.1e-13 Score=125.22 Aligned_cols=121 Identities=40% Similarity=0.821 Sum_probs=107.2
Q ss_pred HHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (934)
Q Consensus 191 ~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (934)
|+.++++++++++++|....+|.|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 34578999999999997322456999999999999999999999998888888887777888888899999999999999
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHH
Q 002342 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (934)
Q Consensus 271 ~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (934)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.++
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~~ 124 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 124 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHHH
Confidence 99999999999999999999999999999999999998443
No 318
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.46 E-value=7.9e-14 Score=127.75 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=104.7
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCC--CCCCCCCCChHHHHHHHHHHhcCCcEE
Q 002342 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETLQNGQSYC 264 (934)
Q Consensus 187 ~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~--~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (934)
++++|+.++++++++++.+|. +|.++++|+++++++||+.++++|... ..+.+|++.......+...+..+..+.
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~ 78 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDV---SGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLT 78 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECT---TSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEE
T ss_pred cHHHHHHHHhcCCceEEEEEc---CCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCce
Confidence 568899999999999999998 677999999999999999999988754 457788887788888888888888899
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 265 ~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
.+++.++++|+.+|+..+..|+++++|.+.+++|+++|||
T Consensus 79 ~e~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 79 LVYRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999998
No 319
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.46 E-value=1e-12 Score=116.86 Aligned_cols=107 Identities=29% Similarity=0.579 Sum_probs=94.6
Q ss_pred CcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCC--CCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (934)
Q Consensus 200 d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (934)
.+|+++|....+|+|+++|++|++++||+.++++|++ ...+.++.........+...+..+..+..++..++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5889999866678999999999999999999999998 45666666666667778888888888888888899999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002342 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 278 wv~~s~~pi~d~~G~v~~~v~~~~DITer 306 (934)
|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999975
No 320
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.46 E-value=7.5e-14 Score=127.91 Aligned_cols=113 Identities=12% Similarity=0.027 Sum_probs=104.1
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCC--CcccCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e 549 (934)
.+|+.++++++++++.+|.+|. ++++|+++++++||+.++++|.. +..+++|++.....+.+...+..+..+..|
T Consensus 4 ~~~~~l~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e 80 (118)
T 3icy_A 4 EELQALVDNIPAAIYHLDVSGQ---ATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLV 80 (118)
T ss_dssp HHHHHHHTTCCCCCEEECTTSC---EEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCC---ceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEE
Confidence 3489999999999999999888 99999999999999999998875 356789998888888888888888899999
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
+++.+++|..+|+.....|+++++|.+.+++|+++|||
T Consensus 81 ~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 81 YRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 99999999999999999999999999999999999998
No 321
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.45 E-value=3.3e-13 Score=123.55 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=90.7
Q ss_pred cccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcC
Q 002342 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (934)
Q Consensus 181 e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g 260 (934)
++.+++..+.++.++++++++|+++|. +|+|+++|++|++++||+++|++|+++..+.++..... +..+..+
T Consensus 5 ~~~~e~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (118)
T 3olo_A 5 NIQSELEFKFAHYLINNAVEASFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQK 76 (118)
T ss_dssp --CHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEECC---CCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhc
Confidence 344566667889999999999999998 77799999999999999999999999886665433222 2334445
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 261 ~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
..+..+.+.++++|+.+|+.++..|+.+.+ ..+++++++|||
T Consensus 77 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 77 NNYTFKTRYRSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred CcEEEEEEEEccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 677788888999999999999999997643 356789999997
No 322
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.44 E-value=2.7e-13 Score=125.53 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=95.2
Q ss_pred HHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC-cEEEEEEEEec
Q 002342 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKK 272 (934)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~k 272 (934)
++++++++|+++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+...+..+. .+..+++.+++
T Consensus 8 ~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~ 84 (121)
T 2kdk_A 8 INVKPTEFITRFAV---NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAK 84 (121)
T ss_dssp CCCCSSEEEEEECT---TSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECS
T ss_pred cccCCccEEEEECC---CeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Confidence 56778999999998 777999999999999999999999998888888877766677777776544 45788999999
Q ss_pred CCcEEEEEEEeeeeecCC-CCEEEEEEEEecchhhH
Q 002342 273 DGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (934)
Q Consensus 273 dG~~~wv~~s~~pi~d~~-G~v~~~v~~~~DITerk 307 (934)
||+.+|++++..|++|.. |.+.+++++.+||++.+
T Consensus 85 dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~ 120 (121)
T 2kdk_A 85 DGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHS 120 (121)
T ss_dssp SSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCC
T ss_pred CCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccC
Confidence 999999999999999886 46778899999999864
No 323
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.44 E-value=5.5e-13 Score=128.32 Aligned_cols=127 Identities=31% Similarity=0.581 Sum_probs=105.3
Q ss_pred ceEEEecccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCC-
Q 002342 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT- 245 (934)
Q Consensus 167 ~~~~~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~- 245 (934)
.++...||+.++..+..+ .++++. ++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.+++.
T Consensus 12 ~~~~~~~~~~r~~~~~~~--------~~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~ 82 (149)
T 3d72_A 12 IMGYLIQIMNRPNPQVEL--------GPVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGM 82 (149)
T ss_dssp HHHHHHHHHHCSSCSSCC--------CSCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSC
T ss_pred eeeeeehhhhCcchhHHH--------HhhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCcccc
Confidence 334457777776654332 345664 8999999544488899999999999999999999999887777764
Q ss_pred ----------ChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEec
Q 002342 246 ----------DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (934)
Q Consensus 246 ----------~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~D 302 (934)
.......+...+..+..+..++..+++||+.+|+.+++.|+++.+|.+.+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 83 VKPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp CCTTCCCSSSCHHHHHHHHHHHHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred ccccccccccChHHHHHHHHHHHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 666677788888888899999999999999999999999999999999999999887
No 324
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.44 E-value=2.6e-13 Score=124.37 Aligned_cols=112 Identities=10% Similarity=0.085 Sum_probs=99.0
Q ss_pred ccHHHHHHhccccEEEEcCC-CCCCCEEEccHHHHHHcCCChhhhcCCC--CcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 472 IDLATTLERIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~-G~~~~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
..|+.++++++++++++|.+ |. ++++|+++++++||+.++++|.+ +..++++++.......+.. +..+..+..
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 86 (125)
T 3eeh_A 11 RRVRELTEATNDILWEFTADLSE---VLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS-LMDGESADV 86 (125)
T ss_dssp HHHHHHHSCCCCEEEEEETTSSC---EEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-HHTTCCEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCCc---EEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-HHcCCCccE
Confidence 56999999999999999998 77 99999999999999999999987 5566777766655555555 667778889
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
++++.+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 87 e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 87 ECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 999999999999999999999999999999999999998
No 325
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.43 E-value=2.4e-13 Score=132.70 Aligned_cols=139 Identities=20% Similarity=0.278 Sum_probs=87.7
Q ss_pred EecccccccccccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHH
Q 002342 171 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 250 (934)
Q Consensus 171 ~~dit~~~~~e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 250 (934)
..+++...+..+++...++.|+.++++++++++++|. +|.|+++|+++++++||+.++++|+++..++++.......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~ 98 (167)
T 1v9y_A 22 RQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 98 (167)
T ss_dssp ------------------CCHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHH
T ss_pred HhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECC---CCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchHH
Confidence 3677777888888889999999999999999999998 7779999999999999999999999988777766655555
Q ss_pred HHHHHHHhcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 251 AKIRETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 251 ~~i~~~l~~g~~----~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
..+......+.. +..++...+++|..+|+.+++.|+ +.+|.+ +++++++|||++++++++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~ 164 (167)
T 1v9y_A 99 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTR 164 (167)
T ss_dssp HHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC------------
T ss_pred HHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHH
Confidence 555555554433 455777789999999999999999 455655 48999999999999998876
No 326
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.41 E-value=3.8e-12 Score=118.60 Aligned_cols=118 Identities=27% Similarity=0.537 Sum_probs=101.1
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCC--CCCCCCCCCChHHHHHHHHHHhcCCcEEEE
Q 002342 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (934)
Q Consensus 189 ~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (934)
+.+...+++++++++++|....+|+|+++|++|++++||+.++++|++ +..+.+++........+...+..+..+..+
T Consensus 19 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (138)
T 2l0w_A 19 DTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVE 98 (138)
T ss_dssp HHHHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeE
Confidence 445566677999999999733346699999999999999999999998 556777776666677788888888888888
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002342 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 267 ~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITer 306 (934)
+..++++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 99 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 99 IAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 8888999999999999999999999999999999999974
No 327
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=4.2e-13 Score=124.24 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=90.1
Q ss_pred HHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (934)
Q Consensus 191 ~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (934)
|+.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.+++........+...+.++.. ..++...
T Consensus 1 ~~~l~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 76 (126)
T 3mjq_A 1 MKNFLETIEDMILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLE 76 (126)
T ss_dssp -CTTGGGCSSEEEEEET---TSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEE
T ss_pred ChhHHhhCCceEEEEeC---CCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEE
Confidence 34678999999999998 7779999999999999999999999988777777666666666666666655 6778888
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 271 ~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
+++|..+|+.++..|+.+ +...+++++++|||+++++++++.
T Consensus 77 ~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~ 118 (126)
T 3mjq_A 77 KKEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPF 118 (126)
T ss_dssp CTTSCEEEEEEEEEEEES--SSSEEEEEEEEECC----------
T ss_pred ccCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccc
Confidence 999999999999988764 345789999999999999998866
No 328
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=99.40 E-value=1.7e-12 Score=142.14 Aligned_cols=108 Identities=11% Similarity=0.095 Sum_probs=92.0
Q ss_pred cccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhc-CCcE-EEEEEEEecCCcE
Q 002342 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-QTDV-TVQLINYTKSGKK 559 (934)
Q Consensus 482 ~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~-~~~~-~~e~~~~~kdG~~ 559 (934)
.+-+...+.+|+ ++|+|+++..++||.++|++|+++..++||++.....+.+...+.. +... ..++|++++||..
T Consensus 176 ~~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTPSCL---FQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecCCce---EEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 345667788777 9999999999999999999999999999999988888888777774 4455 4699999999999
Q ss_pred EEEEEEEEeeecC-CCCEEEEEEEEEcCCccccc
Q 002342 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 560 ~wv~~~~~pi~de-~G~v~~~vgi~rDITerk~~ 592 (934)
+|++...++++|. .+++.+++|.-+-|+.....
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp~~~ 286 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE 286 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCCSSC
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCCCCC
Confidence 9999999999885 57888999998888886653
No 329
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=4.8e-13 Score=123.85 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=91.6
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~ 554 (934)
+.++++++++|+++|.+|. |+++|+++++++||+.++++|+++..++++++.......+...+.++.. ..++.+.+
T Consensus 2 ~~l~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGR---LLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEETTSB---EEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeCCCc---EEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578899999999999888 9999999999999999999999988888887776666667666666655 77888889
Q ss_pred cCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccC
Q 002342 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (934)
Q Consensus 555 kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~ 596 (934)
++|..+|+.++..|+.+ +...+++++++|||++|+++...
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~ 117 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPP 117 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC---------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhccc
Confidence 99999999999987764 34568999999999999965443
No 330
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=99.39 E-value=2.3e-12 Score=140.37 Aligned_cols=106 Identities=9% Similarity=0.084 Sum_probs=90.2
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCC-cEE-EEEEEEecCCcEE
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-DVT-VQLINYTKSGKKF 560 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~-~~~-~e~~~~~kdG~~~ 560 (934)
.-+...+.+|+ ++|+|+++..++||.++|++|+++..++||++.....+.+...+..+. ... .+++++++||..+
T Consensus 166 ~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTPNCL---FQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecCCCe---EEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 45667788777 999999999999999999999999999999998888888888887544 455 6999999999999
Q ss_pred EEEEEEEeeecC-CCCEEEEEEEEEcCCcccc
Q 002342 561 WNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (934)
Q Consensus 561 wv~~~~~pi~de-~G~v~~~vgi~rDITerk~ 591 (934)
|++....++.|. .+++.+++|+-+-|+....
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp~~ 274 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGPLN 274 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECCSS
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCCCC
Confidence 999999999886 5778888998888776544
No 331
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.39 E-value=5.2e-12 Score=112.25 Aligned_cols=107 Identities=31% Similarity=0.551 Sum_probs=92.3
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCC--CcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~ 560 (934)
.+|+++|....+++|+++|+++++++||+.++++|++ ...+.+++........+...+..+..+..+....+++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 6889999752234499999999999999999999998 55566666666667777888888888899999999999999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEEcCCcc
Q 002342 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (934)
Q Consensus 561 wv~~~~~pi~de~G~v~~~vgi~rDITer 589 (934)
|+.++..|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999985
No 332
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.39 E-value=1.1e-12 Score=119.89 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=86.2
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.++.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..+.++..... ...+..+..+..|.++
T Consensus 14 ~~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~ 85 (118)
T 3olo_A 14 FAHYLINNAVEASFCLGDNWQ---FLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRY 85 (118)
T ss_dssp HHHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEE
T ss_pred HHHHHHhcCCceEEEECCCCc---EEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEE
Confidence 378999999999999999888 99999999999999999999999887775443222 2233445677889999
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
.+++|..+|+.++..|+.+.. ..+++++++|||
T Consensus 86 ~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 86 RSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp ECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred EccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 999999999999999997643 346789999997
No 333
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.37 E-value=1.8e-12 Score=126.39 Aligned_cols=136 Identities=22% Similarity=0.298 Sum_probs=88.1
Q ss_pred CCCchhhHHHHHhhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHH
Q 002342 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (934)
Q Consensus 455 ~~dv~~r~~~e~~l~~~-~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~ 533 (934)
+.++.+.+...++++.. ..|..++++++++|+++|.+|. |+++|+++++++||+.++++|+++..++++.......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~ 98 (167)
T 1v9y_A 22 RQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 98 (167)
T ss_dssp ------------------CCHHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHH
T ss_pred HhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECCCCc---EEEECHHHHHHhCCCHHHHcCCChhhccCccccchHH
Confidence 44555555555555444 5799999999999999999888 9999999999999999999999988888776655554
Q ss_pred HHHHHHHhcCCc----EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccccc
Q 002342 534 RKIRAAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (934)
Q Consensus 534 ~~i~~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~ 595 (934)
..+......+.. +..+....+++|..+|+.++..|+ +.+|.+ +++++++|||++|+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~ 162 (167)
T 1v9y_A 99 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQ 162 (167)
T ss_dssp HHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC----------
T ss_pred HHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHH
Confidence 555555544433 455788889999999999999999 456666 499999999999986443
No 334
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.37 E-value=3.1e-13 Score=162.69 Aligned_cols=118 Identities=12% Similarity=0.091 Sum_probs=107.4
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
..+..++++++++|+++|.+|+ |++||++|++++||+.+|++|++...+.++++... ...+...+..+..+.+|++
T Consensus 518 ~~~~~lle~a~~~i~~~D~~gr---I~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~~-~~~i~~~l~~g~~~~~E~~ 593 (635)
T 4eho_A 518 PQASSQVHASMQPVLITDAEGR---ILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESNDF-LRNVAELIDHGRGWRGEVL 593 (635)
T ss_dssp SSHHHHHHHCSSCCEEEETTCC---EEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTHH-HHHHHHHHHHCCCBCCCCE
T ss_pred HHHHHHHHhCCCcEEEECCCCe---EeeHHHHHHHHHCcChHHHcCcchhhccCCCCHHH-HHHHHHHHHcCCcEEEEEE
Confidence 5688999999999999999888 99999999999999999999999877788877665 4566677788888999999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcccccc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e 593 (934)
++++||+.+|+.+++.|++|.+|++++++++++|||+||++|
T Consensus 594 ~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 594 LRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp ECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 999999999999999999999999999999999999999864
No 335
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.36 E-value=7.2e-12 Score=116.70 Aligned_cols=113 Identities=29% Similarity=0.523 Sum_probs=100.0
Q ss_pred HHHHHHhccccEEEEcC---CCCCCCEEEccHHHHHHcCCChhhhcCCC--CcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~---~G~~~~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
+...+++++++|+++|. +|. |+++|+++++++||+.++++|++ +..+.+++........+...+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCA---VIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCB---EEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCE---EEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 45556779999999999 888 99999999999999999999998 56666777777667777788888888888
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcc
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITer 589 (934)
+....+++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999999999999999985
No 336
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.35 E-value=2.1e-12 Score=122.60 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=84.7
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcC-------
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG------- 260 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g------- 260 (934)
.+.++.++++++++|+++|. +|+|+++|++|++++||+++|++|+++..++++.........+......+
T Consensus 6 ~~~l~~i~~~~~d~i~~~D~---~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (129)
T 3mfx_A 6 LETIELFIQHLTEAMILVNA---NGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPV 82 (129)
T ss_dssp HHHHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCS
T ss_pred HHHHHHHHhcCCceEEEECC---CCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCccccccc
Confidence 36789999999999999998 77799999999999999999999999987777766543222222111111
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002342 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (934)
Q Consensus 261 ~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITe 305 (934)
..+..++..+++||+.+|++++++|+.+ ++. .|+++++|+..
T Consensus 83 ~~~~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 83 QHPAQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEH 124 (129)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC--
T ss_pred CCCceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhh
Confidence 1245788889999999999999999973 333 37899999753
No 337
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.35 E-value=3.6e-12 Score=122.54 Aligned_cols=108 Identities=39% Similarity=0.784 Sum_probs=95.5
Q ss_pred HHHHHHhccccEEEEc---CCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCC-----------CHHHHHHHHHH
Q 002342 474 LATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET-----------DPATVRKIRAA 539 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D---~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~-----------~~~~~~~i~~~ 539 (934)
+..+++.. ++|+++| .+|+ |+++|+++++++||+.+|++|+++..+.+++. .......+...
T Consensus 28 ~~~~~~~~-~~i~~~d~~d~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
T 3d72_A 28 ELGPVDTS-VALILCDLKQKDTP---IVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKA 103 (149)
T ss_dssp CCCSCCTT-SCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHH
T ss_pred HHHhhcCC-ccEEEEeccCCCCc---EEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHH
Confidence 33456664 9999999 6777 99999999999999999999999888887764 66677778888
Q ss_pred HhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEc
Q 002342 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (934)
Q Consensus 540 l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rD 585 (934)
+..+..+..+++..+++|..+|+.+++.|+++++|++.+++++++|
T Consensus 104 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 104 IDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp HHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred HHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 8888889999999999999999999999999999999999999887
No 338
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.32 E-value=9.3e-12 Score=130.86 Aligned_cols=118 Identities=15% Similarity=0.216 Sum_probs=94.0
Q ss_pred ccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHc------------CCChhhHcCCCCCCCCCCCCChHHHH
Q 002342 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT------------GYTSKEVVGRNCRFLQGAGTDPEDVA 251 (934)
Q Consensus 184 L~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~------------Gys~eEllG~~~~~l~~~~~~~~~~~ 251 (934)
+.....+++.++++++++|+++|. +|+|+|+|++|++++ ||++++++|+++..+++. .....
T Consensus 17 ~~~e~~~l~~iLd~~~~~vii~D~---~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~ 90 (233)
T 3vol_A 17 RGSHMARIKSALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQR 90 (233)
T ss_dssp -CTHHHHHHHHHTTSSSEEEEEET---TSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEECC---CCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHH
Confidence 345557889999999999999998 778999999999999 899999999998866542 33333
Q ss_pred HHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 252 ~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
.++..+. ..+..++. .+|. |+.++++|++|++|.+.|++++++|||++++++++++
T Consensus 91 ~~~~~~~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~ 146 (233)
T 3vol_A 91 HLLANLT--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVS 146 (233)
T ss_dssp HHHHTCC--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHhcc--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHH
Confidence 4444332 23444443 3553 7799999999999999999999999999999998876
No 339
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.31 E-value=4.4e-12 Score=120.38 Aligned_cols=111 Identities=12% Similarity=0.093 Sum_probs=85.0
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcC-------Cc
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-------TD 545 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~-------~~ 545 (934)
.++.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..++++++.......+......+ ..
T Consensus 8 ~l~~i~~~~~d~i~~~D~~g~---I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (129)
T 3mfx_A 8 TIELFIQHLTEAMILVNANGF---IRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQH 84 (129)
T ss_dssp HHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCE
T ss_pred HHHHHHhcCCceEEEECCCCE---EEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCC
Confidence 389999999999999999888 99999999999999999999999998888876543222222111111 12
Q ss_pred EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcc
Q 002342 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (934)
Q Consensus 546 ~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITer 589 (934)
...|+..+++||+.+|++++++|+.+ |+. .|+++++|+...
T Consensus 85 ~~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~~ 125 (129)
T 3mfx_A 85 PAQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEHH 125 (129)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC---
T ss_pred CceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhhh
Confidence 45789999999999999999999973 333 478999997543
No 340
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.30 E-value=2.2e-13 Score=163.99 Aligned_cols=119 Identities=14% Similarity=0.165 Sum_probs=106.0
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (934)
.+.+..++++++++|+++|. +|+|+|||++|++++||+.+|++|++...+.++++.. ....+...+..++.+.+++
T Consensus 517 ~~~~~~lle~a~~~i~~~D~---~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~-~~~~i~~~l~~g~~~~~E~ 592 (635)
T 4eho_A 517 VPQASSQVHASMQPVLITDA---EGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESND-FLRNVAELIDHGRGWRGEV 592 (635)
T ss_dssp SSSHHHHHHHCSSCCEEEET---TCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTH-HHHHHHHHHHHCCCBCCCC
T ss_pred HHHHHHHHHhCCCcEEEECC---CCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCCHH-HHHHHHHHHHcCCcEEEEE
Confidence 34577889999999999998 7779999999999999999999999877666666554 4566777888888899999
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHH
Q 002342 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (934)
Q Consensus 268 ~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (934)
+.+++||+.+|+.+++.|++|.+|+++|++++++|||++|++|
T Consensus 593 ~~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 593 LLRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp EECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 9999999999999999999999999999999999999999764
No 341
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=1.6e-11 Score=131.24 Aligned_cols=140 Identities=13% Similarity=0.080 Sum_probs=112.1
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 746 (934)
...|++...++.|+.+.||++.. .+..+++|+....... ....+.+|..+|+.+. +..++++++++...+..|+
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 35799999999999999999975 4678999998643111 1235788999999984 6778899999999899999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC------------------------------------- 789 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~------------------------------------- 789 (934)
||||++|.+|.+.+.. ......++.++..+|..||+
T Consensus 88 v~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999998876321 12234678899999999998
Q ss_pred ----------------------CCCeecCCCCCCEEEecCCcEEEEecccCc
Q 002342 790 ----------------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (934)
Q Consensus 790 ----------------------~giiHrDLKp~NILl~~~~~vkl~DFG~a~ 819 (934)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 458999999999999865556799999874
No 342
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.24 E-value=4.8e-12 Score=117.11 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=76.4
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEE
Q 002342 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (934)
Q Consensus 187 ~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (934)
+++.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+.+++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTT---NGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEET---TSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcC---CCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 778999999999999999998 77799999999999999999999999887663332222223334555666543
Q ss_pred EEEEecCCc-EEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 267 LLNYKKDGT-PFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 267 ~~~~~kdG~-~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999997
No 343
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.23 E-value=5.7e-11 Score=110.69 Aligned_cols=106 Identities=17% Similarity=0.256 Sum_probs=80.4
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcC------------CChhhHcCCCCCCCCCCCCChHHHHHHHH
Q 002342 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTG------------YTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (934)
Q Consensus 188 ~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~G------------ys~eEllG~~~~~l~~~~~~~~~~~~i~~ 255 (934)
..++++++++++++|+++|. +|+|+|+|++|++++| |++++++|+++..+.+. ......+..
T Consensus 4 ~~rl~~il~~~~~gviv~D~---~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~ 77 (121)
T 4hi4_A 4 MARIASALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLA 77 (121)
T ss_dssp HHHHHHHHTTSSSEEEEEET---TCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHH
T ss_pred HHHHHHHHhcCCccEEEEcC---CCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHh
Confidence 36789999999999999998 7779999999999995 89999999998866542 222223333
Q ss_pred HHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002342 256 TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 256 ~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITer 306 (934)
.+. ..+..++. .+|. ++.++++|++|.+|.+.|++++++|||++
T Consensus 78 ~~~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 78 NLT--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp HCS--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred CcC--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 222 33444433 3554 56789999999999999999999999974
No 344
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.22 E-value=2.2e-11 Score=118.78 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=95.7
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEEcchH---HHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAG---FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 187 ~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a---~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
+.+.+.++|++++++|+++|. +|+|+|+|++ +++++| ..++++|+++..+.++. .....+.+...++++...
T Consensus 17 ~~~~l~~IL~~~~~gI~~vD~---~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~ 91 (151)
T 2qkp_A 17 SVEQANLILNHLPLEITFVNK---DDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRD 91 (151)
T ss_dssp CHHHHHHHHHHSSSEEEEEET---TSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBS
T ss_pred cHHHHHHHHHhCCCceEEEcC---CCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCcc
Confidence 346789999999999999999 7779999999 999999 56789999998765532 233345567778878776
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 264 ~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
..++.....+ ...++.++..|++|++|.+.|++.+++|||+.++++++++
T Consensus 92 ~~~~~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r~ 141 (151)
T 2qkp_A 92 KVNMWFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEFN 141 (151)
T ss_dssp EEEEEEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC--
T ss_pred EEEEEEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhhh
Confidence 6665543332 1246788999999999999999999999999998887754
No 345
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.20 E-value=1e-11 Score=114.94 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=77.0
Q ss_pred hcccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 002342 470 KGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (934)
Q Consensus 470 ~~~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e 549 (934)
....|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+++++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTTNGT---ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEETTSB---EEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcCCCe---EEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 445699999999999999999888 99999999999999999999999888874332222333334555555543
Q ss_pred EEEEecCCc-EEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 550 LINYTKSGK-KFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 550 ~~~~~kdG~-~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999998
No 346
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.20 E-value=1.6e-11 Score=137.77 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=97.0
Q ss_pred CcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEE
Q 002342 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWN 279 (934)
Q Consensus 200 d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv 279 (934)
..++..|. ||+|+|+|++++.++||+++|++|+++..++||++.......++..+..|..+..++++++|||+.+|+
T Consensus 252 ~f~~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv 328 (361)
T 4f3l_A 252 EFTSRHSL---EWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWL 328 (361)
T ss_dssp EEEEEECT---TSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEE
T ss_pred eeEEEEcC---CceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEE
Confidence 34555555 888999999999999999999999999999999988888888888888888777889999999999999
Q ss_pred EEEeeeeecC-CCCEEEEEEEEecchhhHHHH
Q 002342 280 LLTIAPIKDD-EGKVLKFIGMQVEVSKHTEGA 310 (934)
Q Consensus 280 ~~s~~pi~d~-~G~v~~~v~~~~DITerk~~e 310 (934)
+.+..|++|. +|.+.+++++.+|||+++..+
T Consensus 329 ~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 329 QTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 9999999998 799999999999999998765
No 347
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.19 E-value=7.6e-11 Score=123.87 Aligned_cols=107 Identities=19% Similarity=0.280 Sum_probs=85.5
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHc------------CCChhhhcCCCCcccCCCCCCHHHHHHHHHHH
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT------------EYSREEILGRNCRFLQGPETDPATVRKIRAAI 540 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~------------Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l 540 (934)
++..++++++++|+++|.+|+ |+|+|++|++++ ||++++++|+++..+.+. ......+...+
T Consensus 23 ~l~~iLd~~~~~vii~D~~g~---I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~~~~~~ 96 (233)
T 3vol_A 23 RIKSALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANL 96 (233)
T ss_dssp HHHHHHTTSSSEEEEEETTSB---EEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHHHHHTC
T ss_pred HHHHHHhcCCCcEEEECCCCc---EEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHHHHHhc
Confidence 388999999999999999888 999999999998 899999999998877653 23333333332
Q ss_pred hcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccc
Q 002342 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (934)
Q Consensus 541 ~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~ 592 (934)
. ..+..++. .+|. |+.+++.|++|++|++.+++++++|||+++++
T Consensus 97 ~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~ 141 (233)
T 3vol_A 97 T--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRA 141 (233)
T ss_dssp C--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHH
T ss_pred c--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHH
Confidence 2 23444442 3564 77899999999999999999999999999983
No 348
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.18 E-value=2.3e-11 Score=112.18 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=68.7
Q ss_pred HHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEec
Q 002342 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (934)
Q Consensus 193 ~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~k 272 (934)
.+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+.||++.......+. ..+.....+++.++|
T Consensus 3 ~lle~~~d~i~v~d~---~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLAS---NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcC---CCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 578999999999998 78899999999999999999999999988888887665544332 223334567888999
Q ss_pred CCcEEEEEEEeeeeecCCCC
Q 002342 273 DGTPFWNLLTIAPIKDDEGK 292 (934)
Q Consensus 273 dG~~~wv~~s~~pi~d~~G~ 292 (934)
||+.+|++++++++.+..+.
T Consensus 77 dG~~~wve~~~~~v~~~~~~ 96 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAER 96 (111)
T ss_dssp TSCEEEEEEEEEEC------
T ss_pred CCCEEEEEEEEEEEecccCC
Confidence 99999999999999987653
No 349
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.16 E-value=1.7e-10 Score=107.39 Aligned_cols=104 Identities=19% Similarity=0.284 Sum_probs=79.2
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcC------------CChhhhcCCCCcccCCCCCCHHHHHHHHHHH
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE------------YSREEILGRNCRFLQGPETDPATVRKIRAAI 540 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~G------------ys~eEliG~~~~~l~~~~~~~~~~~~i~~~l 540 (934)
+++.+++++++||+++|.+|+ |+++|++|++++| |+.++++|++...+.+. ......+....
T Consensus 6 rl~~il~~~~~gviv~D~~g~---I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~~~ 79 (121)
T 4hi4_A 6 RIASALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANL 79 (121)
T ss_dssp HHHHHHTTSSSEEEEEETTCB---EEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHHHC
T ss_pred HHHHHHhcCCccEEEEcCCCe---EEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHhCc
Confidence 489999999999999999888 9999999999995 89999999998777643 22222222222
Q ss_pred hcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcc
Q 002342 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (934)
Q Consensus 541 ~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITer 589 (934)
. ..+..++. .+|. ++.++++|++|.+|++.|++++++|||++
T Consensus 80 ~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 80 T--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp S--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred C--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 2 33444433 3554 55788999999999999999999999984
No 350
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.16 E-value=1.5e-11 Score=114.09 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=87.7
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
.+++.++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..++++.........+...+..+.....++.
T Consensus 12 ~~~~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (118)
T 3fg8_A 12 SGRENLYFQGGLGFMALDEDLR---IIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVD 88 (118)
T ss_dssp -CCCCSSSCTTCEEEEECTTCB---EEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEE
T ss_pred chHHHHHhhCCceEEEECCCCe---EEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEE
Confidence 3477889999999999999888 9999999999999999999999988888776666677778888888888777544
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCcc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITer 589 (934)
....+| .|+.+++.|+.+ | ++++++|||+|
T Consensus 89 ~~~~~g--~~~~~~~~p~~~--g----~v~~~~DITer 118 (118)
T 3fg8_A 89 SLYSPG--MTIEVTAAADSG--A----LVVHFRDVTAE 118 (118)
T ss_dssp CSSSTT--CEEEEEEEEETT--E----EEEEEEECSCC
T ss_pred EEcCCC--eEEEEEEEEcCC--c----EEEEEEeccCC
Confidence 333466 478888888743 3 78889999986
No 351
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.16 E-value=3.7e-11 Score=110.77 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=70.7
Q ss_pred HHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEec
Q 002342 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTK 555 (934)
Q Consensus 476 ~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~k 555 (934)
.++++++++|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+. ..+.....+++++++
T Consensus 3 ~lle~~~d~i~v~d~~G~---i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGR---IIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcCCCe---EEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 468899999999999888 99999999999999999999999999999998776544332 223334568889999
Q ss_pred CCcEEEEEEEEEeeecCCC
Q 002342 556 SGKKFWNLFHLQPMRDQKG 574 (934)
Q Consensus 556 dG~~~wv~~~~~pi~de~G 574 (934)
||+.+|++++++++.+..+
T Consensus 77 dG~~~wve~~~~~v~~~~~ 95 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAE 95 (111)
T ss_dssp TSCEEEEEEEEEEC-----
T ss_pred CCCEEEEEEEEEEEecccC
Confidence 9999999999999988655
No 352
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.16 E-value=9.9e-12 Score=115.24 Aligned_cols=112 Identities=17% Similarity=0.121 Sum_probs=86.9
Q ss_pred ccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 184 L~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
+....+.+++++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+..++..+...
T Consensus 7 ~~~~~~~~~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (118)
T 3fg8_A 7 HHHHSSGRENLYFQGGLGFMALDE---DLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQ 83 (118)
T ss_dssp ------CCCCSSSCTTCEEEEECT---TCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCE
T ss_pred cccccchHHHHHhhCCceEEEECC---CCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCce
Confidence 334455667789999999999998 78899999999999999999999999887777666666777888888888887
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002342 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 264 ~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITer 306 (934)
..++.....+| .|+.+++.|+.+ +++++++|||++
T Consensus 84 ~~~~~~~~~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 84 QTRVDSLYSPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp EEEEECSSSTT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred EEEEEEEcCCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 76443333466 578888889743 378899999985
No 353
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.15 E-value=1.2e-10 Score=106.60 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=83.6
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE-EEEEE
Q 002342 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY-CGRLL 268 (934)
Q Consensus 190 ~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~-~~e~~ 268 (934)
+...++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.++... ....+..++..+... ..++.
T Consensus 8 l~~~il~~~~~~i~~~D~---~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (115)
T 3b33_A 8 LPSAILNNMVTATLILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVT 82 (115)
T ss_dssp HHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEE
T ss_pred cHHHHHhhcCceEEEECC---CCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceE
Confidence 456699999999999998 777999999999999999999999997755443221 123445566666654 34555
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 269 ~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
.. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 83 ~~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 83 FV-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp EE-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred Ee-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 55 78999999999999998 776 68899999985
No 354
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.12 E-value=1.7e-10 Score=112.46 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=92.2
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHH---HHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDS---FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a---~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~ 550 (934)
|..++++++++|+++|.+|+ |+|+|++ +++++| ..++++|+++..+.++. .....+.+...++.+.....+.
T Consensus 21 l~~IL~~~~~gI~~vD~~g~---I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~~~~ 95 (151)
T 2qkp_A 21 ANLILNHLPLEITFVNKDDI---FQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDKVNM 95 (151)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSEEEE
T ss_pred HHHHHHhCCCceEEEcCCCe---EEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccEEEE
Confidence 88999999999999999888 9999999 999999 56789999988775533 2333455667777777766666
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccC
Q 002342 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (934)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~ 596 (934)
.....+ ...++.++..|++|++|++.|++.+++|||+.++.+..+
T Consensus 96 ~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r 140 (151)
T 2qkp_A 96 WFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEF 140 (151)
T ss_dssp EEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC-
T ss_pred EEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhh
Confidence 553332 124678889999999999999999999999998865443
No 355
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=2.6e-10 Score=104.25 Aligned_cols=106 Identities=11% Similarity=0.084 Sum_probs=84.1
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc-EEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~-~~~e~~~ 552 (934)
...++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++... ....+...+..+.. ...+..+
T Consensus 9 ~~~il~~~~~~i~~~D~~g~---I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (115)
T 3b33_A 9 PSAILNNMVTATLILDDGLA---IRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTF 83 (115)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEE
Confidence 56699999999999999888 999999999999999999999997777654321 12234445555555 3456666
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 84 ~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 84 V-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp E-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred e-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 5 89999999999999998 776 68899999985
No 356
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.11 E-value=7e-11 Score=133.67 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=91.1
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc-EEEEEEEEecCCcE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YCGRLLNYKKDGTP 276 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-~~~e~~~~~kdG~~ 276 (934)
..+.++..|. ||+++|+|++++.++||+++|++|+++..++||++.......+...+..+.. +..++++++|||+.
T Consensus 277 ~~~fi~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAI---DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECT---TSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECC---CCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4455666666 8889999999999999999999999999899998887777778777766554 55789999999999
Q ss_pred EEEEEEeeeeecC-CCCEEEEEEEEecchhhHH
Q 002342 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (934)
Q Consensus 277 ~wv~~s~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (934)
+|++.+..+++|. .|.+.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 7889999999999999874
No 357
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.05 E-value=6.2e-11 Score=108.61 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=75.3
Q ss_pred hccCcEEEEeCCCCC-CceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHH-HHhc-CCcE---EEEEEEE
Q 002342 197 TFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE-TLQN-GQSY---CGRLLNY 270 (934)
Q Consensus 197 ~~~d~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~-~l~~-g~~~---~~e~~~~ 270 (934)
+.+++|+++|. + |+|+++|++|+++|||+.+|++|+++..+.++..... ...+.. .+.. +... ..++..+
T Consensus 6 ~~~~~i~~~d~---~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDA---KTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEET---TTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEEC---CCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 34579999998 6 7799999999999999999999999987777654332 222222 1111 1111 2345667
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 271 ~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
++||+.+|++++++|+.+.++ .+++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 999999999999999987654 36789999986
No 358
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.03 E-value=8.3e-11 Score=107.74 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=77.9
Q ss_pred hccccEEEEcCC-CCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHH-Hhc-CCc---EEEEEEEE
Q 002342 480 RIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA-IDN-QTD---VTVQLINY 553 (934)
Q Consensus 480 ~~~d~i~v~D~~-G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~-l~~-~~~---~~~e~~~~ 553 (934)
+.+++|+++|.+ |+ |+++|++++++|||+++|++|+++..+++++.... ...+... +.. +.. ...+...+
T Consensus 6 ~~~~~i~~~d~~~g~---I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDAKTTE---ILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEETTTCB---EEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEECCCCe---EEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 356899999998 88 99999999999999999999999988888765443 2222221 111 111 13356778
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCc
Q 002342 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITe 588 (934)
++||+.+|+.++++|+.+..+ .+++++++|++.
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~~ 114 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVER 114 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECCC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecCC
Confidence 999999999999999987654 367899999863
No 359
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=4.7e-10 Score=119.06 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=100.4
Q ss_pred CCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC--ccceeEEEEeCCeEEE
Q 002342 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTKTHVCL 746 (934)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--Iv~l~~~~~~~~~~~l 746 (934)
..|.+....+.|..+.||++.. .+|..|++|+.... ....+.+|..+++.+.+.+ +++++.++..++..|+
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 4566554445666799999964 56778999987643 1234678999999885433 6678998888888999
Q ss_pred EEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
Q 002342 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----------------------------------- 791 (934)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g----------------------------------- 791 (934)
||||++|.+|. ... .+ ...++.+++..|..||+..
T Consensus 93 v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 99999998884 211 11 1256677888888888753
Q ss_pred -----------------------CeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 792 -----------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 792 -----------------------iiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
++|+|++|.|||++.++.+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 99999999999998766667999999843
No 360
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.02 E-value=2.4e-10 Score=127.05 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=99.9
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.++.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++ .....+...+..+.....+.
T Consensus 9 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-- 80 (349)
T 3a0r_A 9 FSESILESLETAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDLPDFE---EIGSVAESVFENKEPVFLNF-- 80 (349)
T ss_dssp CCCSSGGGSSSEEEEEESSSB---CSCBCHHHHHHHSCCSTTTTTCBSTTSTTTT---HHHHHHHHHHHHCCCCEEEC--
T ss_pred HHHHHHhhhcCeEEEECCCCC---EEeeHHHHHHHhCCCHHHHcCcCHHHCcChh---HHHHHHHHHHhcCCceeecc--
Confidence 477899999999999999888 9999999999999999999999988773332 23344455555555433221
Q ss_pred EecCCcEEEEEEEEEeeecCCCCE-EEEEEEEEcCCccccccccCCchhhHHHHHHHHHHhhhhhhhh
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEV-QYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 619 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v-~~~vgi~rDITerk~~e~~~~~~~~~~e~~~~vk~~~~~v~~~ 619 (934)
..+..+|+.++..|+++..|.. .+++++++|||++|+++.+....+...++......+++.+...
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~~~~~~~~~~i~Helr~p 146 (349)
T 3a0r_A 81 --YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNP 146 (349)
T ss_dssp --CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 2223358888999999888775 5899999999999998777765555555555555555444433
No 361
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.2e-09 Score=122.47 Aligned_cols=142 Identities=18% Similarity=0.263 Sum_probs=107.2
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEee--cccccChHHHHHHHHHHHHHHhCC--CCCccceeEEEEeC---Ce
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--KGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK---TH 743 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~--~~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~---~~ 743 (934)
...++.|+.|.++.||++.. .+..+++|+.. .... ......+.+|..+++.|. +..+++++.++.+. +.
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCEEEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CceEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 34467789999999999986 34678899765 3211 112346778999999996 45678899888766 45
Q ss_pred EEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
Q 002342 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------- 789 (934)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~---------------------------------- 789 (934)
.|+||||++|..+.+... ..++......++.+++..|..||+
T Consensus 116 ~~~vme~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 899999999988854321 237788888999999999999997
Q ss_pred ------------------------CCCeecCCCCCCEEEecCCc--EEEEecccCcc
Q 002342 790 ------------------------QGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (934)
Q Consensus 790 ------------------------~giiHrDLKp~NILl~~~~~--vkl~DFG~a~~ 820 (934)
.+++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999997653 68999999854
No 362
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.96 E-value=1.6e-10 Score=105.28 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=85.3
Q ss_pred cccccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCC---ChhhHcCCCCCCCCCCCCChHHHHHHHHHH
Q 002342 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY---TSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257 (934)
Q Consensus 181 e~aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gy---s~eEllG~~~~~l~~~~~~~~~~~~i~~~l 257 (934)
.++++..++.++.++++++++++++|. +|+|+++|++|++++|| +.++++|+++..+.++.. +...+
T Consensus 7 ~~~l~~~~~~~~~il~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~ 76 (118)
T 2w0n_A 7 PYEISTLFEQRQAMLQSIKEGVVAVDD---RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVL 76 (118)
T ss_dssp HHHHCTTHHHHHHHHHCCCCCCEEEBT---TTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccEEEECC---CCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHh
Confidence 456777888999999999999999998 77799999999999998 889999999876655431 44455
Q ss_pred hcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002342 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (934)
Q Consensus 258 ~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DIT 304 (934)
..+....... ...+| .|+.++..|+.+ +|.+.|++++++|||
T Consensus 77 ~~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 77 RDGTPRRDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp HTTCCCCCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred ccCceeccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 5554432211 23456 478888999987 788889999999997
No 363
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=9e-10 Score=123.72 Aligned_cols=122 Identities=13% Similarity=0.181 Sum_probs=98.0
Q ss_pred ccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 184 L~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
.....+.++++++++++||+++|. +|+|+|+|++ ++++ ++.++++|+++..++++. .......+..++.+|...
T Consensus 234 g~~~~~~l~~IL~~l~dgIivvD~---~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~ 307 (369)
T 3cax_A 234 GYLNIEELKAIFEALPVDVTFIDK---DDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKK 307 (369)
T ss_dssp CEECHHHHHHHHHHSSSEEEEECT---TSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCS
T ss_pred chhhHHHHHHHHHhCCCcEEEECC---CCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCce
Confidence 345557889999999999999999 7779999999 9999 999999999998776543 233445566777777765
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhh
Q 002342 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 264 ~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (934)
..+... .++| .++.++..|++|.+|.+.|++.+++|||+.++++++.+
T Consensus 308 ~~~~~~-~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~rr 355 (369)
T 3cax_A 308 EATFWL-RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEKR 355 (369)
T ss_dssp CEEEEE-EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCCC
T ss_pred EEEEEE-eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHhH
Confidence 444443 3456 47889999999999999999999999999988776543
No 364
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.47 E-value=9.8e-11 Score=127.88 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=78.0
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcC---CChhhhcCCCCcccCCCC---CCH--HHHHHHHHHHhc-CCc
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE---YSREEILGRNCRFLQGPE---TDP--ATVRKIRAAIDN-QTD 545 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~G---ys~eEliG~~~~~l~~~~---~~~--~~~~~i~~~l~~-~~~ 545 (934)
+.+++++++||+++|.+|+ |+++|++++++|| ++ ++++|+++..+.+.. ... .+...+...+.+ +..
T Consensus 173 ~~~~~~~~dGIivvD~~G~---Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~ 248 (305)
T 2ykf_A 173 SRSSPRAGDGFIRLDVDGV---VSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKG 248 (305)
Confidence 4568889999999999888 9999999999985 54 789999988776543 110 112222223333 333
Q ss_pred EEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccC
Q 002342 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (934)
Q Consensus 546 ~~~e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~ 596 (934)
...+.. .+| +++.++..|+++ +|++.|++.+++|||++++.|++.
T Consensus 249 ~~~ei~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL 293 (305)
T 2ykf_A 249 MRMEVD---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRAL 293 (305)
Confidence 222221 123 467788899986 588889999999999999965544
No 365
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.92 E-value=3.4e-10 Score=125.76 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=89.9
Q ss_pred ccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 184 L~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
++.+++.++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++ ......+...+..+...
T Consensus 3 l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (349)
T 3a0r_A 3 VEHLRNFSESILESLETAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPV 76 (349)
T ss_dssp ------CCCSSGGGSSSEEEEEES---SSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhhhcCeEEEECC---CCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCce
Confidence 445566788899999999999998 778999999999999999999999998876332 23334455556666543
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCE-EEEEEEEecchhhHHHHHHhh
Q 002342 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKV-LKFIGMQVEVSKHTEGAKDKM 314 (934)
Q Consensus 264 ~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v-~~~v~~~~DITerk~~e~~L~ 314 (934)
.... ..+..+|+.+++.|+.+.+|.. .|++++++|||++++++++++
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~ 124 (349)
T 3a0r_A 77 FLNF----YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERK 124 (349)
T ss_dssp EEEC----CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTT
T ss_pred eecc----cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHH
Confidence 3221 2223358889999999888775 589999999999999887765
No 366
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.91 E-value=9.9e-09 Score=88.43 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=72.8
Q ss_pred ccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (934)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (934)
++++|+++|. +|+|+++|+++++++||+.++++|+++..+ +. .......+...+..+..+.. .. .+|..+
T Consensus 1 ~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFL--NF--YKFGER 70 (96)
T ss_dssp CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEE--EE--EEETTE
T ss_pred CCceEEEEcC---CCCEeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEE--EE--EcCCcE
Confidence 4789999998 777999999999999999999999998766 22 23444556666666665532 22 234456
Q ss_pred EEEEEeeeeecCCCC-EEEEEEEEec
Q 002342 278 WNLLTIAPIKDDEGK-VLKFIGMQVE 302 (934)
Q Consensus 278 wv~~s~~pi~d~~G~-v~~~v~~~~D 302 (934)
|+.+++.|+.+.+|+ +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999988665 6789999887
No 367
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.86 E-value=1.6e-08 Score=87.06 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=73.0
Q ss_pred ccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 002342 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (934)
Q Consensus 481 ~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~ 560 (934)
++++|+++|.+|+ |+++|+++++++||+.++++|+++..+ +. .......+...+..+..+..+ . .+|..+
T Consensus 1 ~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFLN--F--YKFGER 70 (96)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEEE--E--EEETTE
T ss_pred CCceEEEEcCCCC---EeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEEE--E--EcCCcE
Confidence 4789999999888 999999999999999999999998777 32 244445556666666655322 2 234446
Q ss_pred EEEEEEEeeecCCCC-EEEEEEEEEc
Q 002342 561 WNLFHLQPMRDQKGE-VQYFIGVQLD 585 (934)
Q Consensus 561 wv~~~~~pi~de~G~-v~~~vgi~rD 585 (934)
|+.+++.|+.+.+|. +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 899999999988665 6789999887
No 368
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.86 E-value=4e-09 Score=118.45 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=93.9
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 552 (934)
.|..+++++++||+++|.+|+ |+++|++ +++| ++.++++|+++..++++. .....+.+...+..+.....+...
T Consensus 240 ~l~~IL~~l~dgIivvD~~g~---I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~~~~~~ 313 (369)
T 3cax_A 240 ELKAIFEALPVDVTFIDKDDR---VRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKEATFWL 313 (369)
T ss_dssp HHHHHHHHSSSEEEEECTTSB---EEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSCEEEEE
T ss_pred HHHHHHHhCCCcEEEECCCCc---EEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceEEEEEE
Confidence 488999999999999999888 9999999 9999 999999999988877643 333445566667777665455544
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCccccccccCC
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSI 597 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITerk~~e~~~~ 597 (934)
. .+| +++.++..|++|.+|++.|++++++|||+.++.+..++
T Consensus 314 ~-~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~rr 355 (369)
T 3cax_A 314 R-LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEKR 355 (369)
T ss_dssp E-ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCCC
T ss_pred e-eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHhH
Confidence 3 456 47888999999999999999999999999988655543
No 369
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.84 E-value=2e-08 Score=93.27 Aligned_cols=100 Identities=20% Similarity=0.202 Sum_probs=78.2
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCC-CCCCCCChHHHHHHHHHHhcCCcEEEEEEE-
Q 002342 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (934)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~- 269 (934)
..++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.+..|. +..++.+
T Consensus 20 ~~~ld~l~~Gii~lD~---~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4579999999999998 77899999999999999999999999975 4444456667788888888776 4444444
Q ss_pred EecCCcEEEEEEEeeeeecCCCCEEEEE
Q 002342 270 YKKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (934)
Q Consensus 270 ~~kdG~~~wv~~s~~pi~d~~G~v~~~v 297 (934)
.+++|+. +.++++...+++|...++.
T Consensus 96 ~~~~~~p--~~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMTP--TKVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSCC--EEEEEEEEECSSSSEEEEE
T ss_pred EcCCCCE--EEEEEEEEEcCCCCEEEEE
Confidence 4899995 4555566677888876543
No 370
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=1.3e-09 Score=119.09 Aligned_cols=197 Identities=16% Similarity=0.209 Sum_probs=124.6
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCC--ccceeEEEEeCC---eEEEE
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPF--VPALYASFQTKT---HVCLI 747 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~--Iv~l~~~~~~~~---~~~lV 747 (934)
++.++.|.++.||++. ..+++|+... ......+.+|..+|+.+ .+.. ++.++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3458999999999874 3588998643 23456788999999888 3333 445555443333 34899
Q ss_pred EEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 002342 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 789 (934)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-------------------------------------- 789 (934)
|++++|.+|...... .++......++.+++..|..||+
T Consensus 95 m~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999999998764332 27777888888999999999986
Q ss_pred --------------------CCCeecCCCCCCEEEec--CCcEEEEecccCcccCCCCCCCCCcchhhhccccCCCCccc
Q 002342 790 --------------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 847 (934)
Q Consensus 790 --------------------~giiHrDLKp~NILl~~--~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (934)
..++|+|++|.||+++. ++.+.|+||+.+.......... ...... ..
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~--------~~~~~~--~~- 239 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFI--------SLMEDD--EE- 239 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHH--------TTCCTT--TS-
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHH--------HHHhhc--cc-
Confidence 13699999999999998 4567899999985432110000 000000 00
Q ss_pred ccccccccccccCCCCccc-hhhhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002342 848 MAEPMRASNSFVGTEEYIA-PEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (934)
Q Consensus 848 ~~~~~~~~~~~~Gt~~y~a-PE~l~~~~~s~~~DiwSlG~iL~elltG~~Pf~ 899 (934)
. .......+........ |+..... ....+.|++|.++|.+.+|.++|.
T Consensus 240 ~--~~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 240 Y--GMEFVSKILNHYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp C--CHHHHHHHHHHHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred c--CHHHHHHHHHHcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0 0000000111111222 3333211 224689999999999999999884
No 371
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.83 E-value=6.6e-10 Score=101.06 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=78.9
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCC---ChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 002342 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEY---SREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (934)
Q Consensus 472 ~~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gy---s~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 548 (934)
..++.++++++++|+++|.+|+ |+++|+++++++|| +.++++|+++..+.++.. +...+..+.....
T Consensus 15 ~~~~~il~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ 84 (118)
T 2w0n_A 15 EQRQAMLQSIKEGVVAVDDRGE---VTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRRD 84 (118)
T ss_dssp HHHHHHHHCCCCCCEEEBTTTB---CCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCCC
T ss_pred HHHHHHHhhccccEEEECCCCc---EeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceecc
Confidence 4588999999999999999888 99999999999998 889999999887775532 3344444443221
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
+. ...+| .|+.++..|+.+ +|++.+++++++|||
T Consensus 85 ~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 85 EE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp CC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred EE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 11 23456 477888899987 788889999999998
No 372
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.82 E-value=1.8e-08 Score=93.68 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=77.5
Q ss_pred HHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCC-CCCCCCChHHHHHHHHHHhcCCcEEEEEEE-E
Q 002342 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN-Y 270 (934)
Q Consensus 193 ~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~-~ 270 (934)
.++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.+..|. +..++.+ .
T Consensus 26 ~~ld~l~~GiivlD~---dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv~ 101 (129)
T 1mzu_A 26 AEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFVF 101 (129)
T ss_dssp TTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEEE
T ss_pred HHHhccCceEEEECC---CCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEEE
Confidence 369999999999998 77799999999999999999999999975 3444456667788888888766 4444444 4
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEE
Q 002342 271 KKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (934)
Q Consensus 271 ~kdG~~~wv~~s~~pi~d~~G~v~~~v 297 (934)
+++|+. +.++++...+.+|...++.
T Consensus 102 ~~~~~p--~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 102 DFQMAP--VRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp ECSSCE--EEEEEEEEECSSTTEEEEE
T ss_pred cCCCCE--EEEEEEEEEcCCCCEEEEE
Confidence 899995 5555566777888876543
No 373
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.77 E-value=1.2e-08 Score=112.42 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=91.0
Q ss_pred cCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc-----EEEEEEEEecC
Q 002342 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-----YCGRLLNYKKD 273 (934)
Q Consensus 199 ~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-----~~~e~~~~~kd 273 (934)
.+.++..+. ||+++|+|+++..++||+++|++|+++..++||++.....+.++..+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~---dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTA---TGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEET---TCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECC---CCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 456666776 8889999999999999999999999999999999988888888888877664 35689999999
Q ss_pred CcEEEEEEEeeeeecCC-CCEEEEEEEEecchhhH
Q 002342 274 GTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (934)
Q Consensus 274 G~~~wv~~s~~pi~d~~-G~v~~~v~~~~DITerk 307 (934)
|+.+|++.+.++++|.. +.+.+++++.+.|+...
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~ 265 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPK 265 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCC
Confidence 99999999999999875 56778889988888753
No 374
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.77 E-value=5.5e-09 Score=105.23 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=81.3
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC--c
Q 002342 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ--S 262 (934)
Q Consensus 185 ~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~--~ 262 (934)
++..+.++.+++++++|++++|. +|+|+++|+++++++|++.++++|+++..+.++.. +...+..+. .
T Consensus 76 ~~~~~~l~~il~~~~~gvi~~D~---~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 145 (190)
T 2jhe_A 76 EREHLALSALLEALPEPVLSVDM---KSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDS 145 (190)
T ss_dssp THHHHHHHHHHHHCSSCEEEECT---TCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHhCCCcEEEEcC---CCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCC
Confidence 44557899999999999999998 77799999999999999999999999887766542 122344443 2
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCC----EEEEEEEEecchhhH
Q 002342 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGK----VLKFIGMQVEVSKHT 307 (934)
Q Consensus 263 ~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~----v~~~v~~~~DITerk 307 (934)
...++. .+|. ++.++++|+.+.+|. +.|++.+++|||+++
T Consensus 146 ~~~~~~---~~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 146 HNEHVV---INGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp EEEEEE---ETTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred cceEEE---ECCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 333332 2675 456778899875665 788899999999875
No 375
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.25 E-value=7.8e-10 Score=120.74 Aligned_cols=181 Identities=14% Similarity=0.100 Sum_probs=117.4
Q ss_pred HHHHHHHhceeeeccCCC-CCcceEEecccCCCCCCCCCCcccCCCCCceEEEe-ccccc---ccccccccchHHHHHHH
Q 002342 120 AAQRAAEWGLVLKTDTET-GKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSG-EMSDE---GGKEKGLPRVSDIVKDA 194 (934)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-dit~~---~~~e~aL~~~~~~~~~i 194 (934)
+..+|.+-|..++..... ++ ..|..+ +..+..|+.......+.++... |+++. +..|.+..+..+.|..+
T Consensus 84 ~v~~~~~~g~~~~~~~~~~~~----~~~~~~-v~~~~~Pi~~~g~vigvl~~~~~di~~~~~~~~~e~~~~~~~~~L~~m 158 (305)
T 2ykf_A 84 LVAATFSGGVPGREGAVGQQN----SCQHDG-HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRM 158 (305)
Confidence 456677777555333221 00 113333 5566677776544445556668 99986 44555555666666666
Q ss_pred H-----------------HhccCcEEEEeCCCCCCceEEcchHHHHHcC---CChhhHcCCCCCCCCCCC---C-Ch-HH
Q 002342 195 L-----------------STFQQTFVVSDATKPDYPIMYASAGFFKMTG---YTSKEVVGRNCRFLQGAG---T-DP-ED 249 (934)
Q Consensus 195 l-----------------e~~~d~i~v~D~~~~dG~I~~~N~a~~~l~G---ys~eEllG~~~~~l~~~~---~-~~-~~ 249 (934)
+ +++++||+++|. +|+|+++|++++++|| +. ++++|+++..+.+.. . .. ..
T Consensus 159 i~~~~~~~~~~~~~~~~~~~~~dGIivvD~---~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~ 234 (305)
T 2ykf_A 159 LAEGTFPDAGDVAMSRSSPRAGDGFIRLDV---DGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEV 234 (305)
Confidence 5 489999999998 7779999999999985 55 789999988665432 1 00 12
Q ss_pred HHHHHHHHhc-CCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHHHHHhhc
Q 002342 250 VAKIRETLQN-GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (934)
Q Consensus 250 ~~~i~~~l~~-g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (934)
...+..++.+ +.....++. .+| .++.++..|+.+ +|.+.|++.+++|||+.++.+++|+.
T Consensus 235 ~~~l~~vl~~~~~~~~~ei~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~ 295 (305)
T 2ykf_A 235 DEHVQDLLAGDGKGMRMEVD---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALIS 295 (305)
Confidence 2222234443 333222221 223 467888899986 57888999999999999999999874
No 376
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.76 E-value=4.6e-08 Score=90.82 Aligned_cols=100 Identities=9% Similarity=0.080 Sum_probs=78.3
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccC-CCCCCHHHHHHHHHHHhcCCcEEEEEEE-
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~i~~~l~~~~~~~~e~~~- 552 (934)
..++++++.|++++|.+|+ |++||+++++++||++++++|+++...+ +......+...+.+.+..|. ...+...
T Consensus 20 ~~~ld~l~~Gii~lD~~g~---I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCE---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 6689999999999999888 9999999999999999999999987644 44555666777888777666 4444444
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEE
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~v 580 (934)
.+++|+ ++.++++...+.+|...+++
T Consensus 96 ~~~~~~--p~~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMT--PTKVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSC--CEEEEEEEEECSSSSEEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEEE
Confidence 489999 45556666777888776553
No 377
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.73 E-value=5.8e-08 Score=90.28 Aligned_cols=100 Identities=10% Similarity=0.019 Sum_probs=77.6
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccC-CCCCCHHHHHHHHHHHhcCCcEEEEEEE-
Q 002342 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (934)
Q Consensus 475 ~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~i~~~l~~~~~~~~e~~~- 552 (934)
..++++++.||+++|.+|+ |++||.++++++||++++++|+++...+ +......+...+.+.+..|. ...+...
T Consensus 25 ~~~ld~l~~GiivlD~dg~---I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv 100 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFV 100 (129)
T ss_dssp CTTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCe---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 3468999999999999888 9999999999999999999999987644 44555666777888888666 4444444
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEE
Q 002342 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (934)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~de~G~v~~~v 580 (934)
.+++|+ ++.++++...+.+|...+++
T Consensus 101 ~~~~~~--p~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 101 FDFQMA--PVRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp EECSSC--EEEEEEEEEECSSTTEEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEEE
Confidence 489999 45556666777888776543
No 378
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.71 E-value=9.2e-09 Score=103.61 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=79.6
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCC--cEEEEE
Q 002342 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQL 550 (934)
Q Consensus 473 ~l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~--~~~~e~ 550 (934)
.++.+++++++||+++|.+|+ |+++|++++++||++.++++|+++..+.++... ...+..+. ....++
T Consensus 81 ~l~~il~~~~~gvi~~D~~g~---I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 150 (190)
T 2jhe_A 81 ALSALLEALPEPVLSVDMKSK---VDMANPASCQLFGQKLDRLRNHTAAQLINGFNF-------LRWLESEPQDSHNEHV 150 (190)
T ss_dssp HHHHHHHHCSSCEEEECTTCB---EEEECHHHHHHHTSCHHHHTTSBGGGTSTTCCH-------HHHHHTCCCSCEEEEE
T ss_pred HHHHHHHhCCCcEEEEcCCCC---EEEEcHHHHHHhCCCHHHhcCccHHHHhCCCCH-------HHHHhcCCCCCcceEE
Confidence 489999999999999999888 999999999999999999999998888766432 12333333 233333
Q ss_pred EEEecCCcEEEEEEEEEeeecCCCC----EEEEEEEEEcCCcccc
Q 002342 551 INYTKSGKKFWNLFHLQPMRDQKGE----VQYFIGVQLDGSEHLE 591 (934)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~de~G~----v~~~vgi~rDITerk~ 591 (934)
.. +|. ++.+++.|+.+.+|+ +.|++++++|||++++
T Consensus 151 ~~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 151 VI---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp EE---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred EE---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 32 675 456778899875665 7888889999999874
No 379
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.63 E-value=1.3e-07 Score=103.30 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=83.2
Q ss_pred CCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc---EEEEEEEEecCCcEEEEEEEeee
Q 002342 209 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKKDGTPFWNLLTIAP 285 (934)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~kdG~~~wv~~s~~p 285 (934)
..||+++|+|+++..++||.++|++|+++..++||++.....+.+.+.+..+.. ...+++.++|||+.+|++.+.++
T Consensus 181 ~~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwvet~~~~ 260 (317)
T 4dj3_A 181 TPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWSS 260 (317)
T ss_dssp CTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEEEEEEEE
T ss_pred cCCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEEEEEEEE
Confidence 448999999999999999999999999999999999988888888888887654 35789999999999999999999
Q ss_pred eecC-CCCEEEEEEEEecchh
Q 002342 286 IKDD-EGKVLKFIGMQVEVSK 305 (934)
Q Consensus 286 i~d~-~G~v~~~v~~~~DITe 305 (934)
++|. .+++.++++..+-++.
T Consensus 261 ~~np~s~~~e~II~~h~v~~~ 281 (317)
T 4dj3_A 261 FVNPWSRKVSFIIGRHKVRTS 281 (317)
T ss_dssp EECSSSCCEEEEEEEEEECCC
T ss_pred EECCCCCcccEEEEEEEeccC
Confidence 9987 4566677777775544
No 380
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.9e-07 Score=102.66 Aligned_cols=133 Identities=19% Similarity=0.254 Sum_probs=101.2
Q ss_pred CcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC----CCccceeEEEEeCCeEE
Q 002342 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH----PFVPALYASFQTKTHVC 745 (934)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h----p~Iv~l~~~~~~~~~~~ 745 (934)
.+..++.++.|..+.||++ +..+++|+... ......+.+|..+|+.+.+ ..++.++.+ +..|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR-----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc-----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 4456678899999999998 55688997643 2334568899999998865 234566554 4668
Q ss_pred EEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q 002342 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---------------------------------- 791 (934)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g---------------------------------- 791 (934)
+||||++|.+|..... ..++......++.+++..|..||+..
T Consensus 104 lvme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 104 NIMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999999999874432 22677777788888888888888542
Q ss_pred -----------------------------CeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 792 -----------------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 792 -----------------------------iiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
++|+|++|.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 39999999999999866679999999854
No 381
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.56 E-value=2.3e-07 Score=100.95 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=84.6
Q ss_pred CCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC-cEE-EEEEEEecCCcEEEEEEEeeee
Q 002342 209 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYC-GRLLNYKKDGTPFWNLLTIAPI 286 (934)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~-~e~~~~~kdG~~~wv~~s~~pi 286 (934)
..||+++|+|+++..++||.++|++|+++..++||++.....+.+.+.+..++ ... .+++.++|||..+|++.+.+++
T Consensus 172 ~~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~~ 251 (309)
T 3gdi_A 172 TPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDTSWSSF 251 (309)
T ss_dssp CTTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred cCCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEEEEEEEE
Confidence 34899999999999999999999999999889999998877788888887554 455 5899999999999999999999
Q ss_pred ecC-CCCEEEEEEEEecchhh
Q 002342 287 KDD-EGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 287 ~d~-~G~v~~~v~~~~DITer 306 (934)
.|. .+++.++++..+-|+..
T Consensus 252 ~np~s~~~e~ii~~h~v~~gp 272 (309)
T 3gdi_A 252 INPWSRKISFIIGRHKVRVGP 272 (309)
T ss_dssp ECTTTCCEEEEEEEEEEEECC
T ss_pred ECCCCCcccEEEEEEEEccCC
Confidence 886 56778889988888764
No 382
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.52 E-value=1.8e-07 Score=102.18 Aligned_cols=98 Identities=15% Similarity=0.148 Sum_probs=84.0
Q ss_pred CCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhc-CCcE-EEEEEEEecCCcEEEEEEEeeee
Q 002342 209 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN-GQSY-CGRLLNYKKDGTPFWNLLTIAPI 286 (934)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~-g~~~-~~e~~~~~kdG~~~wv~~s~~pi 286 (934)
+.||+++|+|+++..++||.++|++|+++..++||++.....+.+...+.. |... ..++|+++|||..+|++.+.+++
T Consensus 183 ~~dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~~ 262 (320)
T 4dj2_A 183 TPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGF 262 (320)
T ss_dssp CTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEEEECEEEEE
T ss_pred cCCceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEEEEEEEEEE
Confidence 348999999999999999999999999999999999887777777777774 4445 36899999999999999999999
Q ss_pred ecC-CCCEEEEEEEEecchhh
Q 002342 287 KDD-EGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 287 ~d~-~G~v~~~v~~~~DITer 306 (934)
.|. .+++.++++..+-|+..
T Consensus 263 ~np~s~~~e~II~~h~v~~gp 283 (320)
T 4dj2_A 263 VHPWSRKVAFVLGRHKVRTAP 283 (320)
T ss_dssp ECTTTCSEEEEEEEEEESSCC
T ss_pred ECCCCCCccEEEEEEEEccCC
Confidence 886 57788889988887764
No 383
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.38 E-value=2.2e-06 Score=93.49 Aligned_cols=133 Identities=18% Similarity=0.146 Sum_probs=95.8
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC---CccceeEEEE-eCCeEEEEEE
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQ-TKTHVCLITD 749 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~Iv~l~~~~~-~~~~~~lV~E 749 (934)
+..++.|....||++ +..+++|+.. .......+.+|..+|+.|.+. .++.++.+.. ..+..|+|||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK-----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES-----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC-----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456789999999998 4568899853 223456788999999999642 3667777764 4566889999
Q ss_pred ccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 002342 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------------------------------------- 790 (934)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------------------------------------- 790 (934)
|++|.+|....-. .++......++.++...|..||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999888763211 144555555566666666666642
Q ss_pred ---------------------CCeecCCCCCCEEEec---CCc-EEEEecccCcc
Q 002342 791 ---------------------GIIYRDLKPENVLLQG---NGH-VSLTDFDLSCL 820 (934)
Q Consensus 791 ---------------------giiHrDLKp~NILl~~---~~~-vkl~DFG~a~~ 820 (934)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3599999999999987 455 48999998854
No 384
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.29 E-value=4.7e-06 Score=88.85 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=96.1
Q ss_pred cccCCcE-EEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEEEEEccCCC
Q 002342 677 LGSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYCPGG 754 (934)
Q Consensus 677 LG~G~~g-~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~E~~~gg 754 (934)
+..|..+ .||.+.....+..+++|+.... ....+.+|..+|+.+. +--|++++.++.+.+..|+|||+++|.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 3444444 7999888777888999986532 3456788999999884 334778999999999999999999998
Q ss_pred CchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------------------------------------------
Q 002342 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-------------------------------------------- 790 (934)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-------------------------------------------- 790 (934)
++.+..... ......++.++...|..||..
T Consensus 106 ~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 106 TAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp EHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 877654321 112233455566666666631
Q ss_pred --------------CCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 791 --------------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 791 --------------giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.++|+|+.|.|||++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 168999999999999776677999998854
No 385
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=3.7e-06 Score=94.02 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=59.3
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC--ccceeEEEEeC-CeEEEE
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTK-THVCLI 747 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--Iv~l~~~~~~~-~~~~lV 747 (934)
...++.|+.|..+.+|++.. ++..|++|+.... ..+..|..+|+.|.... +++++.+.... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 44567789999999999975 6889999987532 24788999999886533 56777776654 678999
Q ss_pred EEccCCCCch
Q 002342 748 TDYCPGGELF 757 (934)
Q Consensus 748 ~E~~~ggsL~ 757 (934)
|||++|.+|.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999887664
No 386
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.01 E-value=1.6e-05 Score=85.78 Aligned_cols=77 Identities=19% Similarity=0.102 Sum_probs=58.4
Q ss_pred ccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC---CccceeEEEEeCCeEEEEE
Q 002342 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQTKTHVCLIT 748 (934)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~Iv~l~~~~~~~~~~~lV~ 748 (934)
.-.+.|+.|.++.||++.. .+|+.+++|+..... ......+..|..+|+.|.+. .+++++.+. ..|+||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 3466799999999999976 568889999864321 11224578899999999764 578887753 358999
Q ss_pred EccCCCCc
Q 002342 749 DYCPGGEL 756 (934)
Q Consensus 749 E~~~ggsL 756 (934)
||++|+++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999875
No 387
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.97 E-value=1.2e-05 Score=90.86 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=51.0
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccc--cC--hHHHHHHHHHHHHHHhCCC--C-CccceeEEEEeCCeEE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LN--RNKVHRACAEREILDMLDH--P-FVPALYASFQTKTHVC 745 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~--~~--~~~~~~~~~E~~il~~l~h--p-~Iv~l~~~~~~~~~~~ 745 (934)
..+.||.|.++.||++....+++.|++|....... .. .....++..|.++|+.+.. | .++.++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 35678999999999997655678899998653211 00 0123456778899888742 3 45566643 344568
Q ss_pred EEEEccCCCC
Q 002342 746 LITDYCPGGE 755 (934)
Q Consensus 746 lV~E~~~ggs 755 (934)
+||||++|..
T Consensus 112 lvmE~l~g~~ 121 (397)
T 2olc_A 112 TVMEDLSHLK 121 (397)
T ss_dssp EEECCCTTSE
T ss_pred EEEEeCCCcc
Confidence 9999997643
No 388
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.92 E-value=4.9e-05 Score=84.46 Aligned_cols=86 Identities=12% Similarity=0.004 Sum_probs=57.6
Q ss_pred ccccc-ccCCcEEEEEEEEe--c----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-C--CCccceeEEEEeC-
Q 002342 673 PIKPL-GSGDTGSVHLVELC--G----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H--PFVPALYASFQTK- 741 (934)
Q Consensus 673 i~~~L-G~G~~g~Vy~a~~~--~----~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-h--p~Iv~l~~~~~~~- 741 (934)
..+.| +.|..+.+|++... . ++..+++|+..............+.+|..+|+.|. + -.+++++.+..+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34667 88999999998763 1 26689999865432000000134677888888874 2 3577888877655
Q ss_pred --CeEEEEEEccCCCCchh
Q 002342 742 --THVCLITDYCPGGELFL 758 (934)
Q Consensus 742 --~~~~lV~E~~~ggsL~~ 758 (934)
+..|+||||++|..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 35689999999877654
No 389
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.85 E-value=9.3e-05 Score=81.36 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=79.0
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC--CCCccceeE------EEEeCCeEE
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYA------SFQTKTHVC 745 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~------~~~~~~~~~ 745 (934)
+..|+.|..+.||++.. .+..+++|+.... . ..+..|..+++.|. .-.++.++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEE--TTEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEe--CCCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 34566777899999976 3345899988652 1 23334555555442 113344433 123467789
Q ss_pred EEEEccCCCCchh-----------h---hcc--CCC--C-C-------CCHH--------H-------------------
Q 002342 746 LITDYCPGGELFL-----------L---LDR--QPT--K-V-------LKED--------A------------------- 772 (934)
Q Consensus 746 lV~E~~~ggsL~~-----------~---l~~--~~~--~-~-------l~~~--------~------------------- 772 (934)
++|+|++|.++.. . ++. ... . . .... .
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 9999999876530 0 111 000 0 0 0000 0
Q ss_pred ----HHHHHHHHHHHHHHHHH-------------CCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 773 ----VRFYAAEVVVALEYLHC-------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 773 ----~~~i~~qil~aL~yLH~-------------~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
+..+..++..++.+|+. .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11112233445666652 5799999999999998888999999998854
No 390
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.55 E-value=0.00057 Score=74.38 Aligned_cols=76 Identities=20% Similarity=0.173 Sum_probs=60.8
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCccceeEEEEeCCeEEEEEE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCLITD 749 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~~~~~~lV~E 749 (934)
-...|+.|....+|++.. ++..|++|+.... ....+..|...|+.|. ...+++++.+....+..|+|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 346789999999999975 5678889987542 2456788999888883 3678899998888889999999
Q ss_pred ccCCCCc
Q 002342 750 YCPGGEL 756 (934)
Q Consensus 750 ~~~ggsL 756 (934)
|++|..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998865
No 391
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.23 E-value=0.00068 Score=77.14 Aligned_cols=77 Identities=23% Similarity=0.192 Sum_probs=45.7
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccc--cC--hHHHHHHHHHHHHHHhC---CCCCccceeEEEEeCCeEE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LN--RNKVHRACAEREILDML---DHPFVPALYASFQTKTHVC 745 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~--~~--~~~~~~~~~E~~il~~l---~hp~Iv~l~~~~~~~~~~~ 745 (934)
-++.||.|..+.||++.. +++.++||....... .. .........|.+++..+ ....+++++.+. ....+
T Consensus 38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~ 113 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMAL 113 (420)
T ss_dssp EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence 356789999999999964 567899994332110 00 00001122233333322 335677777665 46678
Q ss_pred EEEEcc-CC
Q 002342 746 LITDYC-PG 753 (934)
Q Consensus 746 lV~E~~-~g 753 (934)
+||||+ +|
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 77
No 392
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.20 E-value=0.00037 Score=75.46 Aligned_cols=72 Identities=14% Similarity=0.032 Sum_probs=46.0
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc-cceeEEEEeCCeEEEEEEcc-
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYC- 751 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I-v~l~~~~~~~~~~~lV~E~~- 751 (934)
++.|+.|....+|++ ..|++|+...... ......+|..+++.+....+ ++++..+ .+.-++++||+
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred eeEcCCcccccccee------eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 678999999999999 4588998765311 11123457777777642222 5666543 33457899999
Q ss_pred CCCCch
Q 002342 752 PGGELF 757 (934)
Q Consensus 752 ~ggsL~ 757 (934)
+|.+|.
T Consensus 91 ~g~~l~ 96 (301)
T 3dxq_A 91 GAQTMS 96 (301)
T ss_dssp TCEECC
T ss_pred CCccCC
Confidence 766653
No 393
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.18 E-value=0.0008 Score=75.23 Aligned_cols=138 Identities=18% Similarity=0.218 Sum_probs=84.1
Q ss_pred cccccCCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEEE
Q 002342 675 KPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l 746 (934)
+.|..|-...+|++.... +++.|++|+.-.. ......+.+|..+++.|. +.-.+++++.+.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 467778888999998742 3578999986432 112345668999998874 3334677776654 29
Q ss_pred EEEccCCCCchhhh-----------------ccC---CCCCC--CHHHHHHHHHHHHH-------------------HHH
Q 002342 747 ITDYCPGGELFLLL-----------------DRQ---PTKVL--KEDAVRFYAAEVVV-------------------ALE 785 (934)
Q Consensus 747 V~E~~~ggsL~~~l-----------------~~~---~~~~l--~~~~~~~i~~qil~-------------------aL~ 785 (934)
||||++|.+|..-- +.. ..+.. -...+..+..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 99999987664210 000 01112 23455555544422 233
Q ss_pred HHH----HC----CCeecCCCCCCEEEecC----CcEEEEecccCcc
Q 002342 786 YLH----CQ----GIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 820 (934)
Q Consensus 786 yLH----~~----giiHrDLKp~NILl~~~----~~vkl~DFG~a~~ 820 (934)
.|. .. .++|+|+.+.|||++.+ +.+.|+||.+|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 333 22 59999999999999876 7899999999854
No 394
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.17 E-value=0.00032 Score=64.79 Aligned_cols=97 Identities=8% Similarity=-0.000 Sum_probs=76.6
Q ss_pred CCCCCceEEcchHHHHHcCCCh--hhHcCCCCCCCCCCCCCh--HHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEe
Q 002342 208 TKPDYPIMYASAGFFKMTGYTS--KEVVGRNCRFLQGAGTDP--EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI 283 (934)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~--eEllG~~~~~l~~~~~~~--~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~ 283 (934)
.+.||+|+++..... ..+|.. +||+|+.+..++|+++.. ...+.+..++..|...+.-++.+.|+|..+|++...
T Consensus 13 h~~dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~s 91 (132)
T 1oj5_A 13 QDTTGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRC 91 (132)
T ss_dssp ECTTCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEE
Confidence 344899999999987 478888 999999999888988855 778888889988888888899999999999999998
Q ss_pred eeeecCC-CCEEEEEEEEecchh
Q 002342 284 APIKDDE-GKVLKFIGMQVEVSK 305 (934)
Q Consensus 284 ~pi~d~~-G~v~~~v~~~~DITe 305 (934)
..+++.. .++-+++++-.=+.+
T Consensus 92 k~f~np~t~e~e~Ivs~n~v~r~ 114 (132)
T 1oj5_A 92 KLCYPQSPDMQPFIMGIHIIDRE 114 (132)
T ss_dssp EEECC----CCCEEEEEEEEECC
T ss_pred EEecCCCCCCCCEEEEEEEEEcC
Confidence 8888752 344555665544443
No 395
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.16 E-value=0.00093 Score=72.78 Aligned_cols=141 Identities=19% Similarity=0.235 Sum_probs=79.0
Q ss_pred cccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC--CccceeEE------EEeCCeE
Q 002342 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP--FVPALYAS------FQTKTHV 744 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~Iv~l~~~------~~~~~~~ 744 (934)
-++.|+.|....+|++... ++ .|++|+..... ....+..|..+++.|... .++.++.. ....+..
T Consensus 26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~ 98 (322)
T 2ppq_A 26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRP 98 (322)
T ss_dssp EEEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEE
T ss_pred EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEE
Confidence 3566788988999999763 33 68899887521 112345677777666321 13333321 1234677
Q ss_pred EEEEEccCCCCchhh--------------hcc--CC--CC---CCCHHHHHH---------------HHHHHHHHHHHHH
Q 002342 745 CLITDYCPGGELFLL--------------LDR--QP--TK---VLKEDAVRF---------------YAAEVVVALEYLH 788 (934)
Q Consensus 745 ~lV~E~~~ggsL~~~--------------l~~--~~--~~---~l~~~~~~~---------------i~~qil~aL~yLH 788 (934)
+++|+|++|..+... ++. .. .. ......... +...+...+++++
T Consensus 99 ~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~ 178 (322)
T 2ppq_A 99 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA 178 (322)
T ss_dssp EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 999999988764210 111 00 00 011110010 0011334455555
Q ss_pred H-------CCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 789 C-------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 789 ~-------~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
. .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus 179 ~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 179 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3 3699999999999999765568999998854
No 396
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.10 E-value=0.0013 Score=74.91 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=51.3
Q ss_pred ccccccCCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEE
Q 002342 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 745 (934)
++.|+.|-...||++.... ++..|++|+.... .. ...+..|..+++.|. +...+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4578889999999998753 2578999988431 11 134457888888884 3334677776543 2
Q ss_pred EEEEccCCCCch
Q 002342 746 LITDYCPGGELF 757 (934)
Q Consensus 746 lV~E~~~ggsL~ 757 (934)
+||||++|.+|.
T Consensus 149 ~v~e~l~G~~l~ 160 (429)
T 1nw1_A 149 RLEEYIPSRPLS 160 (429)
T ss_dssp EEECCCCEEECC
T ss_pred EEEEEeCCcccC
Confidence 899999875553
No 397
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.88 E-value=0.002 Score=71.71 Aligned_cols=75 Identities=21% Similarity=0.255 Sum_probs=45.8
Q ss_pred ccccccCCcEEEEEEEEec--------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-ccceeEEEEeCCeE
Q 002342 674 IKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHV 744 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~--------~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-Iv~l~~~~~~~~~~ 744 (934)
+..|+.|....+|++.... .+..|++|+..... ........|..+++.+...+ +++++..+ .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV----DELYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG----GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc----cceecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4567888889999998743 13688999876431 11112356888888774223 55777654 22
Q ss_pred EEEEEccCCCCc
Q 002342 745 CLITDYCPGGEL 756 (934)
Q Consensus 745 ~lV~E~~~ggsL 756 (934)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999988654
No 398
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.84 E-value=0.0058 Score=70.03 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=50.1
Q ss_pred ccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc-cceeEEEEeCCeEEEEEEccC
Q 002342 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYCP 752 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I-v~l~~~~~~~~~~~lV~E~~~ 752 (934)
++.|+.|-...+|++.....+..|++|+...... . .-...+|..+++.|...++ +++++.+. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~---~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD---E-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC---S-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh---h-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4578889999999998754458899998754321 1 1112578999998864444 67777763 2 25999998
Q ss_pred CCCch
Q 002342 753 GGELF 757 (934)
Q Consensus 753 ggsL~ 757 (934)
|.+|.
T Consensus 185 G~~l~ 189 (458)
T 2qg7_A 185 GYALS 189 (458)
T ss_dssp SEECC
T ss_pred CccCC
Confidence 86653
No 399
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.78 E-value=0.0058 Score=65.42 Aligned_cols=81 Identities=19% Similarity=0.081 Sum_probs=56.5
Q ss_pred cCCcccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC---CCccceeEEEEeCCeE
Q 002342 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH---PFVPALYASFQTKTHV 744 (934)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~~~~~ 744 (934)
.....-+..+|.|..+.||++.. .+|+.|.+|+...... .....+..|...|+.|.. -.+++++.+. ..
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~---~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~ 85 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DR 85 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TT
T ss_pred CCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCc---chhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cc
Confidence 34556678899999999999986 6788999998654321 122346789999998842 2355665542 23
Q ss_pred EEEEEccCCCCc
Q 002342 745 CLITDYCPGGEL 756 (934)
Q Consensus 745 ~lV~E~~~ggsL 756 (934)
++||||++++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999987654
No 400
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.78 E-value=0.0021 Score=70.43 Aligned_cols=138 Identities=13% Similarity=0.161 Sum_probs=71.7
Q ss_pred cccccCCcEE-EEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCccceeEEEEeCCeEEEEEEcc
Q 002342 675 KPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDYC 751 (934)
Q Consensus 675 ~~LG~G~~g~-Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~~~~lV~E~~ 751 (934)
+.|+.|+... +|++.. .++..+++|...... ...+..|..+++.+.. -.+++++.+....+ +++||++
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~------~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE------GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTT------TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC------CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 3465555554 666653 236677888654321 0234456777766632 24566776533333 7899999
Q ss_pred CCCCchhhhccC---------------------C---CCCCCHHHHH-------H-HH------------HHHHHHHHHH
Q 002342 752 PGGELFLLLDRQ---------------------P---TKVLKEDAVR-------F-YA------------AEVVVALEYL 787 (934)
Q Consensus 752 ~ggsL~~~l~~~---------------------~---~~~l~~~~~~-------~-i~------------~qil~aL~yL 787 (934)
.+..+.+.+... . ...++..... . +. ..+...+..|
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 766654332210 0 0112221111 0 00 0111222333
Q ss_pred ------HHCCCeecCCCCCCEEEecC----CcEEEEecccCccc
Q 002342 788 ------HCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLT 821 (934)
Q Consensus 788 ------H~~giiHrDLKp~NILl~~~----~~vkl~DFG~a~~~ 821 (934)
+...++|+|+.+.|||++.+ +.+.|+||+.+...
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 12469999999999999874 68999999998653
No 401
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=96.77 E-value=0.0014 Score=60.56 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=79.4
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCCh--hhhcCCCCcccCCCCCCH--HHHHHHHHHHhcCCcEEEEEEEEecCCc
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSR--EEILGRNCRFLQGPETDP--ATVRKIRAAIDNQTDVTVQLINYTKSGK 558 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~--eEliG~~~~~l~~~~~~~--~~~~~i~~~l~~~~~~~~e~~~~~kdG~ 558 (934)
.-+.-.|.+|+ |++|.....+ .+|.. +||+|+.+.+++|+++.. ...+.+.+++..|.....-++++.++|.
T Consensus 8 ~F~sRh~~dGK---f~~vDq~~~r-~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~ 83 (132)
T 1oj5_A 8 SFMTKQDTTGK---IISIDTSSLR-AAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGT 83 (132)
T ss_dssp EEEEEECTTCC---EEEEECHHHH-TTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSC
T ss_pred eeEEeecCCCc---EEEEeccccc-ccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCc
Confidence 44566788888 9999998874 77788 999999999999999865 7778888888888777778999999999
Q ss_pred EEEEEEEEEeeecCC-CCEEEEEEEEEcCCc
Q 002342 559 KFWNLFHLQPMRDQK-GEVQYFIGVQLDGSE 588 (934)
Q Consensus 559 ~~wv~~~~~pi~de~-G~v~~~vgi~rDITe 588 (934)
.+|+......+++.. .++-+++++-.=|.+
T Consensus 84 ~V~~qT~sk~f~np~t~e~e~Ivs~n~v~r~ 114 (132)
T 1oj5_A 84 MLSAHTRCKLCYPQSPDMQPFIMGIHIIDRE 114 (132)
T ss_dssp EEEEEEEEEEECC----CCCEEEEEEEEECC
T ss_pred EEEEEEEEEEecCCCCCCCCEEEEEEEEEcC
Confidence 999999888887742 345556655443443
No 402
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.66 E-value=0.0064 Score=66.89 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=27.6
Q ss_pred CCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 790 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 790 ~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
..++|+|+.|.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3699999999999999888899999998754
No 403
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.62 E-value=0.0065 Score=66.18 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=78.7
Q ss_pred cccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCccceeEE-----EEeCCeEEEE
Q 002342 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYAS-----FQTKTHVCLI 747 (934)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~Iv~l~~~-----~~~~~~~~lV 747 (934)
..|+ |....||++.. .+|+.|++|+...... ....+..|..+++.|.. -.++.++.. ....+..+++
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 78889998865 3466799999864311 12355667787777632 123444432 2235667899
Q ss_pred EEccCCCCchh-----------h---hcc----CC---CCCCCHHHH----------------------HHHHHHHHHHH
Q 002342 748 TDYCPGGELFL-----------L---LDR----QP---TKVLKEDAV----------------------RFYAAEVVVAL 784 (934)
Q Consensus 748 ~E~~~ggsL~~-----------~---l~~----~~---~~~l~~~~~----------------------~~i~~qil~aL 784 (934)
|+|++|..+.. . ++. .. ...++.... ...+.+++..+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 99998765431 0 000 00 011221111 01111222222
Q ss_pred HHH----HHCCCeecCCCCCCEEEecCCcEEEEecccCcc
Q 002342 785 EYL----HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (934)
Q Consensus 785 ~yL----H~~giiHrDLKp~NILl~~~~~vkl~DFG~a~~ 820 (934)
.-+ +...++|+|++|.|||++ + .+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 211 123589999999999998 4 899999998854
No 404
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.55 E-value=0.0097 Score=66.76 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=86.3
Q ss_pred cccccccCCcEEEEEEEEec-------CCeEEEEEEeeccccc-----------ChH----HHHHHHHHHHHHHhCC-CC
Q 002342 673 PIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVML-----------NRN----KVHRACAEREILDMLD-HP 729 (934)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~-------~~~~vAlK~~~~~~~~-----------~~~----~~~~~~~E~~il~~l~-hp 729 (934)
-++.|..|-...+|++.... ....|.+++.-+.... ++. ....+..|..+++.+. +.
T Consensus 56 ~v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~G 135 (401)
T 3f2s_A 56 HISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERS 135 (401)
T ss_dssp EEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcC
Confidence 34567778889999998743 1468999987653210 000 1122335888888884 44
Q ss_pred CccceeEEEEeCCeEEEEEEccCCCCchhhh-----------------ccC---CCCCCC--HHHHHHHHHHHH------
Q 002342 730 FVPALYASFQTKTHVCLITDYCPGGELFLLL-----------------DRQ---PTKVLK--EDAVRFYAAEVV------ 781 (934)
Q Consensus 730 ~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l-----------------~~~---~~~~l~--~~~~~~i~~qil------ 781 (934)
-.+++++++..+ +|+||++|.+|..-- +.. ..+... ...+..+..++.
T Consensus 136 i~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 136 LGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp SSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 567888777542 899999876663210 000 011121 223444443322
Q ss_pred ----------------HHH----HHHHHC----CCeecCCCCCCEEEecC------CcEEEEecccCcc
Q 002342 782 ----------------VAL----EYLHCQ----GIIYRDLKPENVLLQGN------GHVSLTDFDLSCL 820 (934)
Q Consensus 782 ----------------~aL----~yLH~~----giiHrDLKp~NILl~~~------~~vkl~DFG~a~~ 820 (934)
.-+ .+|... .++|+|+.+.|||++.+ +.+.|+||.+|..
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223332 58999999999999876 7899999999854
No 405
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.75 E-value=0.017 Score=65.46 Aligned_cols=75 Identities=21% Similarity=0.321 Sum_probs=49.6
Q ss_pred ccccccCCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCccceeEEEEeCCeEE
Q 002342 674 IKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (934)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~-------~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 745 (934)
++.|..|-...+|++..... +..|++|+..... .......+|..+++.+. +.-.+++++.+. + +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence 35677888889999987521 5789999875432 11112356888888774 334567775442 2 6
Q ss_pred EEEEccCCCCc
Q 002342 746 LITDYCPGGEL 756 (934)
Q Consensus 746 lV~E~~~ggsL 756 (934)
+||+|++|..|
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998765
No 406
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.70 E-value=0.067 Score=54.09 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=68.1
Q ss_pred CCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecccCcccCCCCCCCCCcc
Q 002342 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (934)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~giiHrDLKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 832 (934)
-+|.++|... +.+++++++|.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 3688888765 4679999999999999999877622 2222344457899999999987764 2210
Q ss_pred hhhhccccCCCCcccccccccccccccCCCCccchhhhcCCCCCchhHHHHHHHHHHHHH-hCCCCCC
Q 002342 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFR 899 (934)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~~DiwSlG~iL~ell-tG~~Pf~ 899 (934)
.....|.|||.+. ...+.+.=|||||++||.-+ .|-++=.
T Consensus 98 --------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e 138 (229)
T 2yle_A 98 --------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE 138 (229)
T ss_dssp -----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE
T ss_pred --------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc
Confidence 0122466777763 34456888999999999999 4665543
No 407
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.28 E-value=0.17 Score=56.68 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=25.0
Q ss_pred CeecCCCCCCEEEe------cCCcEEEEecccCcc
Q 002342 792 IIYRDLKPENVLLQ------GNGHVSLTDFDLSCL 820 (934)
Q Consensus 792 iiHrDLKp~NILl~------~~~~vkl~DFG~a~~ 820 (934)
++|+|+.+.|||+. .++.+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 68999999999994 456799999999854
No 408
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=84.33 E-value=0.61 Score=50.66 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=49.2
Q ss_pred cEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEec-CCcE
Q 002342 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTK-SGKK 559 (934)
Q Consensus 484 ~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~---~~~e~~~~~k-dG~~ 559 (934)
.++++|.. +++|+.+|..+++++|+++++++|+++..+++++. ...+...+..+.. ...++..... +|..
T Consensus 44 ~Ll~~~~~--~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~ 117 (337)
T 2ool_A 44 YLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGERA 117 (337)
T ss_dssp EEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEEE
T ss_pred EEEEEECC--CCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCeE
Confidence 34456654 45599999999999999999999999988887643 3344444433221 2234444333 3556
Q ss_pred EEEEEEE
Q 002342 560 FWNLFHL 566 (934)
Q Consensus 560 ~wv~~~~ 566 (934)
+|+.++.
T Consensus 118 f~~~~Hr 124 (337)
T 2ool_A 118 FNGILHR 124 (337)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665543
No 409
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=82.35 E-value=1.6 Score=47.37 Aligned_cols=77 Identities=17% Similarity=0.168 Sum_probs=48.2
Q ss_pred CcE-EEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCc---EEEEEEEEec-CC
Q 002342 200 QTF-VVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKK-DG 274 (934)
Q Consensus 200 d~i-~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~k-dG 274 (934)
.|+ +++|. .+++|+.+|..+++++|+++++++|+++..+++++ ....++..+..+.. ....++.... +|
T Consensus 42 ~G~Ll~~~~--~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~----~~~~l~~~l~~~~~~~~~p~~~~~~~~~~~ 115 (337)
T 2ool_A 42 HGYLFVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAA----SAARLTHALHGGDPAAINPIRLDVVTPDGE 115 (337)
T ss_dssp TSEEEEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHH----HHHHHHHHHCC----CCCSEEEEEEETTEE
T ss_pred CEEEEEEEC--CCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHH----HHHHHHHHHhcCCccccCcEEEEEeccCCC
Confidence 344 44553 26889999999999999999999999988777653 33445555544321 1123333333 35
Q ss_pred cEEEEEEE
Q 002342 275 TPFWNLLT 282 (934)
Q Consensus 275 ~~~wv~~s 282 (934)
..+|+.+.
T Consensus 116 ~~f~~~~H 123 (337)
T 2ool_A 116 RAFNGILH 123 (337)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 56665543
No 410
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.80 E-value=4.4 Score=40.73 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=60.5
Q ss_pred CCCCccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec
Q 002342 727 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (934)
Q Consensus 727 ~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~giiHrDLKp~NILl~~ 806 (934)
.||+++.. .+-..++.+.+.++.-+.+.=+..++ .++....+.++.+|+....+++ .-+|--|+|+||+++.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~ 114 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTR 114 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECT
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcC
Confidence 68888877 56667777767666543222222232 2778888888888888774443 3477789999999999
Q ss_pred CCcEEEEecccC
Q 002342 807 NGHVSLTDFDLS 818 (934)
Q Consensus 807 ~~~vkl~DFG~a 818 (934)
++.+++.=.|+-
T Consensus 115 ~~~p~i~~RGik 126 (215)
T 4ann_A 115 DGLPIAKTRGLQ 126 (215)
T ss_dssp TSCEEESCCEET
T ss_pred CCCEEEEEccCc
Confidence 999999988875
No 411
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=73.21 E-value=24 Score=32.02 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcc-CcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEEE
Q 002342 188 SDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (934)
Q Consensus 188 ~~~~~~ile~~~-d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (934)
+..++.+-+... +.|+++|. +|..++... .+.+|+++.. .+ .+..++. |..+...
T Consensus 38 ~~~~~~~~~~~~~~~i~v~d~---~G~~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~ 93 (131)
T 1p0z_A 38 KALIDPMRSFSDATYITVGDA---SGQRLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSV 93 (131)
T ss_dssp HHHHHHHHHHSCCSEEEEEET---TSBEEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcC---CCcEEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEE
Confidence 344454444443 47888888 676776542 3458876431 11 1233444 4444432
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchh
Q 002342 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (934)
Q Consensus 267 ~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITe 305 (934)
. .|...+.-....||++++|+++|++.+..++..
T Consensus 94 ~-----~g~~g~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 94 R-----KGSLGSSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp E-----EETTEEEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred E-----EccceeeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 2 222222333345999888999999999888764
No 412
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=72.33 E-value=16 Score=36.03 Aligned_cols=99 Identities=8% Similarity=0.101 Sum_probs=60.8
Q ss_pred chHHHHHHHHHhccC--cEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcE
Q 002342 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (934)
Q Consensus 186 ~~~~~~~~ile~~~d--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (934)
.....|..+.+..+. .++++|. +|.++..... ...|.+ .. ....+..++..+..+
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~~~~~~~~----------~~~~~~------~~----~r~~f~~a~~~~~~~ 111 (217)
T 4dah_A 55 KMQSILEKTFDSEPRFSGLYFLNA---KGDVTASTTE----------LKTKVN------LA----DRSFFIKAKETKKTV 111 (217)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEET---TCBEEEESSC----------CSSCCB------CT----TSHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHhcCCcccEEEEECC---CCcEEEecCC----------CCCCCC------cc----hhHHHHHHHhcCCcE
Confidence 344566666665544 6888888 7778876430 001111 11 124455666666665
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhHHH
Q 002342 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (934)
Q Consensus 264 ~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk~~ 309 (934)
-.+...-..+|. ++-....||++.+|++.|+++...++....+.
T Consensus 112 is~~~~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~~ 155 (217)
T 4dah_A 112 ISDSYSSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKNL 155 (217)
T ss_dssp ECCCEECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHHH
T ss_pred EeceEEcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHHH
Confidence 444433345566 55566789999899999999999888765443
No 413
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=68.22 E-value=9.5 Score=38.43 Aligned_cols=85 Identities=9% Similarity=-0.030 Sum_probs=60.3
Q ss_pred CCCCccceeEEEEeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCCeecCCCCCCEEEe
Q 002342 727 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE-YLHCQGIIYRDLKPENVLLQ 805 (934)
Q Consensus 727 ~hp~Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~-yLH~~giiHrDLKp~NILl~ 805 (934)
.||++ -..+-.+++.+.+.++.-+++.=+..++. ++....+.++.+|+.... ++ ..-+|--|+|+||+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~ 118 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFN 118 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEEC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEe
Confidence 67888 44455677887777776544433344432 777888887777776554 33 4557788999999999
Q ss_pred cCCcEEEEecccCcc
Q 002342 806 GNGHVSLTDFDLSCL 820 (934)
Q Consensus 806 ~~~~vkl~DFG~a~~ 820 (934)
.++.+++.=.|+-..
T Consensus 119 ~~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 119 RALEPFFLHVGVKES 133 (219)
T ss_dssp TTCCEEESCCEETTT
T ss_pred CCCcEEEEEcCCccc
Confidence 999999999997533
No 414
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=57.43 E-value=1.2e+02 Score=35.39 Aligned_cols=82 Identities=18% Similarity=0.319 Sum_probs=50.2
Q ss_pred cceeEEEEeCCeEEEEEEccCCCCchhhhccCC-----------CC----CCCHHHHHHHHHHHH--HHHHHHHHCCCee
Q 002342 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------TK----VLKEDAVRFYAAEVV--VALEYLHCQGIIY 794 (934)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~----~l~~~~~~~i~~qil--~aL~yLH~~giiH 794 (934)
+..|.+........| +|++++.++.+.+...+ .. .........++..++ +.+-|+= ||
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL--Gi-- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL--GV-- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee--ec--
Confidence 456666666555544 57777766655543211 00 011233444555444 3344444 43
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|=+++||||+.+|++.=+|||.+
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cCCCCcceeEcCCCCEeeeehHHh
Confidence 588899999999999999999987
No 415
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=56.60 E-value=1.2 Score=50.69 Aligned_cols=64 Identities=3% Similarity=-0.062 Sum_probs=17.9
Q ss_pred ccccccccCCcEEEEEEEEecCCeEEEE------EEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEEEE
Q 002342 672 RPIKPLGSGDTGSVHLVELCGSGQYFAM------KAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (934)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vAl------K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 739 (934)
.+.+.|| ||.||++.......+||+ |..+.... .......+.+|..+++.++|||+++.+.+-.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~-~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGV-SEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccc-cccccccccccccccccccccccCCCcceEE
Confidence 4455666 999999998665567888 65543222 2344456778999999999999999987654
No 416
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=56.35 E-value=1.1e+02 Score=36.35 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=48.6
Q ss_pred cceeEEEEeCCeEEEEEEccCCCCchhhhccCC-----------C--CCC--CHHHHHHHHHHHH--HHHHHHHHCCCee
Q 002342 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------T--KVL--KEDAVRFYAAEVV--VALEYLHCQGIIY 794 (934)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~--~~l--~~~~~~~i~~qil--~aL~yLH~~giiH 794 (934)
+..|.+........| .|++++.+|.+++...+ . ..+ .......++..++ +.+.|+= ||
T Consensus 476 i~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL--Gl-- 550 (696)
T 2x6h_A 476 LTPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL--GV-- 550 (696)
T ss_dssp CCCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred EeccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc--cC--
Confidence 344555555444433 46766666666654321 0 011 1223344444444 3344443 33
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|-+++||||+.+|++.-+|||.+
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSC
T ss_pred CCCCCcceEEeCCCCEEEEeehhh
Confidence 688999999999999999999987
No 417
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=55.72 E-value=51 Score=30.29 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=51.5
Q ss_pred hHHHHHHHHHhcc-CcEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCCcEEE
Q 002342 187 VSDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (934)
Q Consensus 187 ~~~~~~~ile~~~-d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (934)
.+..++.+-+... +.|+++|. +|..++... .+.+|+++. .++ +..++ .|+.+..
T Consensus 43 l~~~~~~~~~~~~~~~i~v~d~---~G~~~~~~~----------~~~iG~~~~---~~~--------~~~al-~G~~~~~ 97 (142)
T 3by8_A 43 IQAIAEAVRKRNDLLFIVVTDM---QSLRYSHPE----------AQRIGQPFK---GDD--------ILKAL-NGEENVA 97 (142)
T ss_dssp HHHHHHHHHHHTTCSEEEEEET---TCBBSCCSS----------GGGTTSBCC---CGG--------GTGGG-GTCCEEE
T ss_pred HHHHHHHHHhhcCCcEEEEECC---CCcEEECCC----------hHHCCCcCC---CCC--------HHHHh-CCCeEEE
Confidence 3445555554443 47888888 665665432 346887643 111 12233 3444433
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhH
Q 002342 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (934)
Q Consensus 266 e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITerk 307 (934)
.. ....|.. +. ...||++++|+++|++.+..++....
T Consensus 98 ~~--~~~~g~~--~~-~~~PV~~~~g~viGvv~vg~~~~~~~ 134 (142)
T 3by8_A 98 IN--RGFLAQA--LR-VFTPIYDENHKQIGVVAIGLELSRVT 134 (142)
T ss_dssp EE--CSSSSCE--EE-EEEEEECTTSCEEEEEEEEEEHHHHH
T ss_pred Ee--cCccEEE--EE-EEEeEEcCCCCEEEEEEEeEEHHHHH
Confidence 21 1222322 33 34599988899999999999887543
No 418
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=51.63 E-value=38 Score=30.59 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=44.8
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEE
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWN 562 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv 562 (934)
+.|+++|.+|. .+.... .+.+|+++.. .+ .+..++. |+.+.... ....| +.
T Consensus 51 ~~i~v~d~~G~---~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~~--~g~~g---~~ 101 (131)
T 1p0z_A 51 TYITVGDASGQ---RLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSVR--KGSLG---SS 101 (131)
T ss_dssp SEEEEEETTSB---EEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEEE--EETTE---EE
T ss_pred CEEEEEcCCCc---EEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEEE--Eccce---ee
Confidence 58999999877 655332 3457875321 11 1223444 34433322 11222 23
Q ss_pred EEEEEeeecCCCCEEEEEEEEEcCCc
Q 002342 563 LFHLQPMRDQKGEVQYFIGVQLDGSE 588 (934)
Q Consensus 563 ~~~~~pi~de~G~v~~~vgi~rDITe 588 (934)
-....||++++|+++|++.+..++..
T Consensus 102 ~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 102 LRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred EEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 33455999888999999999888654
No 419
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=49.41 E-value=31 Score=33.88 Aligned_cols=90 Identities=10% Similarity=0.043 Sum_probs=54.4
Q ss_pred HHHHHHhcc--ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 002342 474 LATTLERIE--KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (934)
Q Consensus 474 l~~i~e~~~--d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 551 (934)
|..+....+ ..++++|.+|. ++..+.. ...+. ...+++ .+..++..+..+-.+..
T Consensus 60 L~~~~~~~~~~~~i~i~d~~G~---~~~~~~~----------~~~~~------~~~~r~----~f~~a~~~~~~~is~~~ 116 (217)
T 4dah_A 60 LEKTFDSEPRFSGLYFLNAKGD---VTASTTE----------LKTKV------NLADRS----FFIKAKETKKTVISDSY 116 (217)
T ss_dssp HHHHHTTCTTEEEEEEEETTCB---EEEESSC----------CSSCC------BCTTSH----HHHHHHHHCSCEECCCE
T ss_pred HHHHHhcCCcccEEEEECCCCc---EEEecCC----------CCCCC------CcchhH----HHHHHHhcCCcEEeceE
Confidence 555555444 47899999888 8765430 00111 111222 34445555666544443
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCCc
Q 002342 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (934)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDITe 588 (934)
.-..+|. ++-....|+++.+|++.|+++...++..
T Consensus 117 ~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~ 151 (217)
T 4dah_A 117 SSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDY 151 (217)
T ss_dssp ECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHH
T ss_pred EcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHH
Confidence 3345666 5666778999989999999998777544
No 420
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=47.83 E-value=67 Score=34.36 Aligned_cols=139 Identities=19% Similarity=0.257 Sum_probs=74.4
Q ss_pred cccccccccCCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCccceeEE-------------
Q 002342 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS------------- 737 (934)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vAlK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~------------- 737 (934)
+..++..-.|.. .||.+.. ++..|+||-.. .-..+.+..++...-.+.-|+.--+...
T Consensus 71 v~~I~~s~~Gst-gvff~~t--d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~ 141 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVET--ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA 141 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEE--SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred eeEEEeccCCCC-CeEEEEe--CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence 556666666665 4555554 57788999431 1122333334444334455543211110
Q ss_pred ----E-----EeCCeEEEEEEccCCCCchhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----Cee-cCCCCCCEE
Q 002342 738 ----F-----QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----IIY-RDLKPENVL 803 (934)
Q Consensus 738 ----~-----~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~yLH~~g----iiH-rDLKp~NIL 803 (934)
+ ......+++|+|.+|..|...-...-...+.....+.+. -+-++..+..++ .++ .--.|+|||
T Consensus 142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheE
Confidence 0 012256799999988877665332111123333332211 134566777663 111 235789999
Q ss_pred EecCC-cEEEEecccCcc
Q 002342 804 LQGNG-HVSLTDFDLSCL 820 (934)
Q Consensus 804 l~~~~-~vkl~DFG~a~~ 820 (934)
++.++ .+.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 98754 589999999854
No 421
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=47.38 E-value=91 Score=31.15 Aligned_cols=96 Identities=13% Similarity=0.185 Sum_probs=57.5
Q ss_pred chHHHHHHHHHhccC--cEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHh--cCC
Q 002342 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ--NGQ 261 (934)
Q Consensus 186 ~~~~~~~~ile~~~d--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~--~g~ 261 (934)
.....|+.+....+. .++++|. +|. +..+.. .. ..+.+ . .....+..++. .+.
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~-~~~s~~------~~---~~~~~------~----~~r~~f~~a~~~~~~~ 111 (254)
T 3lif_A 55 VFNERLRALADNLPQLSDVAILDA---DGQ-LTYASV------KP---VPALD------N----SDRSYFRYHRANDDHT 111 (254)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECT---TSB-EEEESS------SS---EECCB------C----TTSHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhcCCccceEEEECC---CCC-EecCCC------CC---CCCCC------c----ccHHHHHHHHhCCCCC
Confidence 345667777776664 6888887 787 443221 00 11111 1 11244566666 455
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhh
Q 002342 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (934)
Q Consensus 262 ~~~~e~~~~~kdG~~~wv~~s~~pi~d~~G~v~~~v~~~~DITer 306 (934)
.+-.+...-...|. |+-....||++.+|++.|+++...++...
T Consensus 112 ~~is~p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l 154 (254)
T 3lif_A 112 LLITGPIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYF 154 (254)
T ss_dssp CEEEEEEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHH
T ss_pred eEECCceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHH
Confidence 55555443334565 55566789999899999999988887543
No 422
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=45.22 E-value=45 Score=35.66 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=40.5
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcC
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ 543 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~ 543 (934)
-.++++|. +++|+.++..+.+++|.+.++++|++...++.+ .....+...+...
T Consensus 30 G~Ll~~~~---~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~ 83 (327)
T 4e04_A 30 GLLLALAA---DMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEP 83 (327)
T ss_dssp SEEEEECT---TCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSC
T ss_pred eEEEEEcC---CCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhcc
Confidence 45567774 445999999999999999999999998877654 3344556665544
No 423
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=42.91 E-value=36 Score=36.41 Aligned_cols=53 Identities=17% Similarity=0.260 Sum_probs=39.8
Q ss_pred EEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCCCCChHHHHHHHHHHhcCC
Q 002342 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (934)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (934)
++++| .+++|+.++..+..++|.++++++|+++..++.+ .....+...+....
T Consensus 32 Ll~~~---~~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 32 LLALA---ADMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp EEEEC---TTCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred EEEEc---CCCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 35555 3888999999999999999999999998766543 34455666665543
No 424
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=41.74 E-value=25 Score=30.41 Aligned_cols=43 Identities=14% Similarity=0.277 Sum_probs=33.0
Q ss_pred cccchHHHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCC
Q 002342 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT 228 (934)
Q Consensus 183 aL~~~~~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys 228 (934)
.+++.--..+.+..++|..+.+-+.... |+|+|.+|.+||--+
T Consensus 14 SVnk~iL~iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ke 56 (127)
T 4ew7_A 14 SVNKYILSIQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKE 56 (127)
T ss_dssp HHHHHHHHHHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSC
T ss_pred HHHHHHHhHHhhhcCCCccEEEecccce---EEEecchHHHHhhcc
Confidence 3444444567788899999999988555 999999999996543
No 425
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=40.71 E-value=1.6e+02 Score=36.70 Aligned_cols=24 Identities=21% Similarity=0.392 Sum_probs=22.6
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|=+++||||+.+|++.-+|||.+
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCC
T ss_pred cCCCCcceEEeCCCCEEEEeehhh
Confidence 688899999999999999999987
No 426
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=34.65 E-value=2.3e+02 Score=24.55 Aligned_cols=90 Identities=11% Similarity=0.145 Sum_probs=51.5
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 002342 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (934)
Q Consensus 474 l~~i~e~~~d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 553 (934)
.+.+..+.|..|.+-+.... |+|.|.+|.++|--+..-+-|...... .-+..-...+.-...+..|.. -.+..
T Consensus 22 iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ked~~~sg~S~~~~-~vE~~LS~LELeCqsLGhG~a---f~r~F 94 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKEDQPLSGDSYNRY-GVEVFLSSLELECQSLGHGAA---FCRRF 94 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSCCCGGGCTTSSHH-HHHHHHHHHHHHHHHHCTTCE---EEEEE
T ss_pred HHhhhcCCCccEEEecccce---EEEecchHHHHhhcccCcccCccccee-eehhhHHHHHHHHHhhcCCce---EEEEe
Confidence 67888999999999999888 999999999996433222333321110 000000111222233333333 23444
Q ss_pred ecCCcEEEEEEEEEeee
Q 002342 554 TKSGKKFWNLFHLQPMR 570 (934)
Q Consensus 554 ~kdG~~~wv~~~~~pi~ 570 (934)
.-.|+.+.+.+......
T Consensus 95 n~~~e~yQIRmE~iSf~ 111 (127)
T 4ew7_A 95 NFHGEIYQIRMENISFD 111 (127)
T ss_dssp EETTEEEEEEEEEEECT
T ss_pred ecCCceEEEEEEEeeec
Confidence 56788777766655543
No 427
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=29.22 E-value=22 Score=38.23 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=33.9
Q ss_pred cEEEEeCCCCCCceEEcchHHHHHcCCChhhHcCCCCCCCCCC
Q 002342 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243 (934)
Q Consensus 201 ~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~ 243 (934)
+.+++|.. +++|+.++..+.+++|.++++++|+++..++.+
T Consensus 54 ~LL~l~~~--~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 54 ALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEECC--CCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 34566642 788999999999999999999999998876665
No 428
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=28.65 E-value=25 Score=37.90 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=35.0
Q ss_pred ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCC
Q 002342 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGP 526 (934)
Q Consensus 483 d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~ 526 (934)
-.++++|.. +++|+.++....+++|.+.++++|+++..++.+
T Consensus 53 G~LL~l~~~--~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 53 GALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp SEEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred eEEEEEECC--CCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 455667753 455999999999999999999999998888776
No 429
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=28.11 E-value=48 Score=41.40 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=22.9
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|=+++||||+.+|++.-+|||.+
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~ 963 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHI 963 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCC
T ss_pred CCCCCccEEEecCCCEEEEeehhh
Confidence 799999999999999999999987
No 430
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=27.58 E-value=1.8e+02 Score=28.78 Aligned_cols=89 Identities=13% Similarity=0.181 Sum_probs=51.9
Q ss_pred HHHHHHhcc--ccEEEEcCCCCCCCEEEccHHHHHHcCCChhhhcCCCCcccCCCCCCHHHHHHHHHHHh--cCCcEEEE
Q 002342 474 LATTLERIE--KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID--NQTDVTVQ 549 (934)
Q Consensus 474 l~~i~e~~~--d~i~v~D~~G~~~~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~--~~~~~~~e 549 (934)
|..+....+ ..++++|.+|. +...+. . ...+.+ ..++ ..+..++. .+..+-.+
T Consensus 60 L~~~~~~~~~~~~i~i~d~~G~---~~~s~~-------~---~~~~~~------~~~r----~~f~~a~~~~~~~~~is~ 116 (254)
T 3lif_A 60 LRALADNLPQLSDVAILDADGQ---LTYASV-------K---PVPALD------NSDR----SYFRYHRANDDHTLLITG 116 (254)
T ss_dssp HHHHHHHCTTEEEEEEECTTSB---EEEESS-------S---SEECCB------CTTS----HHHHHHHHCCCCCCEEEE
T ss_pred HHHHHhcCCccceEEEECCCCC---EecCCC-------C---CCCCCC------cccH----HHHHHHHhCCCCCeEECC
Confidence 555555555 36899999766 554321 0 001111 1122 23445555 45555555
Q ss_pred EEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEEcCC
Q 002342 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (934)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~de~G~v~~~vgi~rDIT 587 (934)
...-...|. |+-....|+++.+|++.|++++..|+.
T Consensus 117 p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~ 152 (254)
T 3lif_A 117 PIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESE 152 (254)
T ss_dssp EEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHH
T ss_pred ceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHH
Confidence 444334565 556677899998999999998877753
No 431
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=23.60 E-value=46 Score=40.95 Aligned_cols=24 Identities=21% Similarity=0.428 Sum_probs=22.7
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|=+++||||+.+|++.-+|||.+
T Consensus 788 gDRH~~NILid~tG~v~HIDFG~~ 811 (940)
T 2wxf_A 788 GDRHSDNIMIRESGQLFHIDFGHF 811 (940)
T ss_dssp CCCCGGGEEEETTSCEEECCCCCC
T ss_pred CCCCcccEEEecCCCEEEEeehhh
Confidence 688999999999999999999987
No 432
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=21.48 E-value=3.4e+02 Score=25.96 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=32.7
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEeeeeecCC-CCEEEEEEEEecchhh
Q 002342 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKH 306 (934)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~s~~pi~d~~-G~v~~~v~~~~DITer 306 (934)
..+..++..+..+-.....-..+|. ++-....|+++.+ |++.|++++..++...
T Consensus 93 ~w~~~~~~~~~~~~s~~~~~~~~~~--~~i~~~~pi~~~~~g~~~Gvl~~~i~~~~l 147 (240)
T 3c8c_A 93 PWYKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAEL 147 (240)
T ss_dssp HHHHHHHHHTSCEECCCEECTTTCC--EEEEEEEEEECTTTCCEEEEEEEEECHHHH
T ss_pred hHHHHHHhcCCcEEeeceEcCCCCe--EEEEEEEEEEECCCCeEEEEEEEEEEHHHH
Confidence 4455555555543333222223555 4555568998865 9999999888776543
No 433
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.22 E-value=5e+02 Score=26.02 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=32.7
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEEcchHHHHHcCCChhhH
Q 002342 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232 (934)
Q Consensus 189 ~~~~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl 232 (934)
+............++++|.. .+.+.+++..+..++||+++++
T Consensus 33 ~~~~~~~~~~~~~~~l~D~~--~~~~~~~s~~~~~llG~~~~~~ 74 (258)
T 3clo_A 33 QFVRSLTEVNGGCAVISDLS--NRKSYVTVHPWANFLGLTPEEA 74 (258)
T ss_dssp HHHHHHHHHHSSEEEEEETT--TTEEEEEECTTCGGGCCCHHHH
T ss_pred HHHHHHHHHcCCeEEEEEcC--CCeEEEEeCCHHHHhCCCcccc
Confidence 33444444456678899965 7789999999999999999988
No 434
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=20.89 E-value=1e+02 Score=38.07 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=22.9
Q ss_pred cCCCCCCEEEecCCcEEEEecccC
Q 002342 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (934)
Q Consensus 795 rDLKp~NILl~~~~~vkl~DFG~a 818 (934)
+|=+++||||+.+|++.-+|||.+
T Consensus 804 gDRH~~NILid~tG~v~HIDFG~~ 827 (961)
T 1e7u_A 804 GDRHNDNIMISETGNLFHIDFGHI 827 (961)
T ss_dssp CCCCGGGEEEETTCCEEECCCCCC
T ss_pred cCCCCcceEEecCCCEEEEeehhh
Confidence 789999999999999999999987
Done!